Digital Commons Network^™

Data Archive: Using A Coproduction Approach To Map Future Forest Retention Likelihood In The Southeastern United States, Rachel E. Greene, Kristine O. Evans, Michael T. Gray, D. Todd Jones-Farrand, William G. Wathen

CFR Publications

Supporting data for publication titled: Using a Coproduction Approach to Map Future Forest Retention Likelihood in the Southeastern United States;

Journal of Forestry, 2020, 28–43 doi:10.1093/jofore/fvz063

Locating Of Suitable Agriculture Implements On The Flat And Sloping Lands Of The Villages Of Mahabad With Gis Software, Javad Tarighi, Anwar Jannah

Emirates Journal for Engineering Research

The purpose of this study is to find suitable agricultural equipment in flat and steep areas of Mahabad villages by GIS software. This research is a kind of applied research. The research design is descriptive (non-experimental). The statistical population of the present study consists of 50 experts in the field of agricultural machinery working in the field of agriculture and agricultural machinery. The tool used to collect data was paired comparisons and spatial information extracted from files which are relevant to data of spatial layers file type. The data analysis method includes hierarchical analysis in expert choice software and the …

American Black Bears (Ursus Americanus) Of The Paunsaugunt Plateau: Movements And Habitat Use, Rebekah Adriana Castro Dungan

Theses and Dissertations

Concerns over human-bear conflict and questions about the ecology of Paunsaugunt Plateau's population of black bears (Ursus americanus) arose due to their visitation to popular recreation sites. Greater insight about bears and their habitat use provides a foundation for conflict mitigation and effective management decisions. Between 2014 and 2017, seventeen black bears (11 female, 6 male) were fitted with global positioning system (GPS) radio-collars so that we could track their locations, daily activity patterns, and ambient temperatures. By analyzing bear locations, we calculated annual and seasonal home ranges for 16 bears, including 25 den sites. Home ranges typically consisted of …

Volume 2, Chapter 3-3: Slime Molds: Ecology And Habitats - Bark And Logs, Janice M. Glime

Bryophyte Ecology Subchapters

No abstract provided.

Enteric Methane And Nitrogen Emissions In Beef Cattle Grazing A Tannin-Containing Legume Relative To Feedlot And Traditional Pasture-Based Production Systems, Raúl David Guevara Ballesteros

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Beef cattle production is highly criticized because of the high use of land and water resources, and by the pollution (e.g., the gas methane in a cow’s breath and nitrogen in urine) produced by cows fed in feedlots. In contrast to feedlots diets and grasses, some plants (e.g., legumes) contain bioactive compounds (condensed tannins) that reduce pollution and enhance animal nutrition. In my research, I observed that cows grazing a tannin-containing legume (birdsfoot trefoil; BFT) had methane emissions similar to cows fed a feedlot ration with comparable weight gains. Cows in the BFT treatment gained more weight than cows grazing …

Plant Community Composition And Structure Monitoring At Wind Cave National Park, 2019 Data Report, Theresa L. Schaffner, Daniel J. Swanson, Stephanie L. Rockwood

United States National Park Service: Publications

Abstract

This report presents the results of the Northern Great Plains Inventory and Monitoring Network (NGPN) and Northern Great Plains Fire Ecology Program (NGPFire) vegetation monitoring at Wind Cave National Park (WICA) in 2019. This was the ninth year of combined monitoring efforts.

Crew members from NGPN visited 18 long-term monitoring plots to collect data representing the plant communities at WICA. The NGPFire program collected pre- and post-burn data from an additional 37 plant community and forest structure monitoring plots. This work is part of a long-term monitoring effort designed to evaluate the condition of the vegetation community and understand …

Vegetation Classification And Mapping, Missouri National Recreational River, Tom Baldvins, Matt Ley, David Jones, Joe Stevens, Hannah Pilkington

United States National Park Service: Publications

Executive Summary

The vegetation inventory project at Missouri National Recreational River (MNRR) classified and mapped vegetation within the park administrative boundary and estimated thematic map accuracy quantitatively. The project was conducted over a four year period from the summer of 2015 to the winter of 2019.

The project follows guidance provided by the National Park Service (NPS) Vegetation Mapping Inventory (VMI) Program. The overall process includes initial planning and scoping, imagery procurement, field data collection, data analysis, imagery interpretation and classification, and accuracy assessment. The initial planning and scoping meetings to support study plan development took place in December, 2009, …

Fragsad: A Database Of Diversity And Species Abundance Distributions From Habitat Fragments, Jonathan M. Chase, Mario Liebergesell, Alban Sagouis, Felix May, Shane A. Blowes, Åke Berg, Enrico Bernard, Berry J. Brosi, Marc W. Cadotte, Luis Cayuela, Adriano G. Chiarello, Jean Francois Cosson, Will Cresswell, Filibus Danjuma Dami, Jens Dauber, Chris R. Dickman, Raphael K. Didham, David P. Edwards, Fábio Z. Farneda, Yoni Gavish, Thiago Gonçalves-Souza, Demetrio Luis Guadagnin, Mickaël Henry, Adrià López-Baucells, Heike Kappes, Ralph Mac Nally, Shiiwua Manu, Alexandre Camargo Martensen, Duncan Mccollin

Biological Sciences Faculty Publications

Habitat destruction is the single greatest anthropogenic threat to biodiversity. Decades of research on this issue have led to the accumulation of hundreds of data sets comparing species assemblages in larger, intact, habitats to smaller, more fragmented, habitats. Despite this, little synthesis or consensus has been achieved, primarily because of non-standardized sampling methodology and analyses of notoriously scale-dependent response variables (i.e., species richness). To be able to compare and contrast the results of habitat fragmentation on species’ assemblages, it is necessary to have the underlying data on species abundances and sampling intensity, so that standardization can be achieved. To accomplish …

Plant Community Composition And Structure Monitoring At Agate Fossil Beds National Monument, 2019 Data Report, Molly B. Davis

United States National Park Service: Publications

Abstract

This report presents the results of vegetation monitoring efforts in 2019 at Agate Fossil Beds National Monument (AGFO) by the Northern Great Plains Inventory and Monitoring Network (NGPN) and the Northern Great Plains Fire Ecology Program (NGPFire). This was the ninth year of combined monitoring efforts.

In 2019, crew members from NGPN visited 6 long-term plant community monitoring (PCM) plots to collect data on the upland mixed-grass prairie plant communities at AGFO. This work is part of a long-term monitoring program established to better understand the condition of the vegetation community and how it changes over time. NGPN staff …

Staphylococcus Aureus Resistance Patterns In Wisconsin: 2018 Surveillance Of Wisconsin Organisms For Trends In Antimicrobial Resistance And Epidemiology (Swotare) Program Report, Rebecca H. Schulte, Erik Munson

Clinical Lab Sciences Faculty Research and Publications

Objective: Surveillance of antimicrobial resistance patterns on a local level can reveal paradigms not obvious on a regional or national scale. Data collection from this perspective may potentially impact local prescribing patterns and empiric treatment guidelines. The objective of this study was to establish a baseline Staphylococcus aureus antibiogram for the state of Wisconsin and to elucidate potential geographic and demographic factors associated with antimicrobial resistance.

Design: Multi-center laboratory surveillance, with testing at a single site utilizing standardized media and susceptibility testing protocols.

Methods: 309 isolates of clinically-significant S. aureus were collected from hospital microbiology laboratories across Wisconsin in 2018, …

Genetic Relationships Using Mitochondrial Versus Nuclear Markers: Is The Catfish Rag1 Gene Suitable For Species Differentiation In The Family Pangasiidae?, Huong Thanh Hoang

Graduate Theses and Dissertations

The Mekong River located in Southeast Asia is a global “hotspot” for aquatic biodiversity. It includes an extensive variety of fish species second only to the Amazon River in South America. Recent studies have revealed the impacts of anthropogenic and climate factors on this river system. Such impacts can result in the formation of barriers, which divide a species population and impede gene flow between separated sub-populations. Barriers influence evolutionary trajectories resulting in the generation of geographic variants or subspecies from an ancestral population. Catfish (Teleostei: Siluriformes) are a key species of the Mekong River ecosystem and are an essential …

Effects Of Different Water And Nitrogen Regimens On Yield Of Winter Wheat Produced In Nebraska, Joseph Emory Davis

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Wheat is the 3rd most prominent crop in the United States and approximately 50% is exported annually. Nebraska wheat production is 11^th in the country, and it plays a major role in the state's agricultural economy, especially in western Nebraska. Generally, wheat is grown under dryland conditions and the region grows much more wheat on unirrigated land than it does on irrigated. However, deficit irrigation has shown great value in producing high yielding wheat with much less water than needed for other crops. Finding new ways to leverage irrigation in wheat production may help address the need to produce …

Legumes, Livestock And Livelihoods In The Australian Mixed Farming System, E. C. Wolfe

IGC Proceedings (1977-2023)

This Howard Oration describes the pathway that I have taken towards my specialisation in ‘big picture’ agriculture. A simple protocol is presented for the analysis of agricultural systems by using descriptive or quantitative indicators of five system properties: productivity, sustainability, profitability, social wellbeing and political acceptability. These properties are further illustrated by considering four important issues in the Australian sheep-wheat belt, a distinctive world food production system. The issues are the supply of and demand for legume nitrogen for crops, reconciling agricultural and natural resource objectives, the low profitability of farms in relation to production and marketing risks, and the …

Does Intensification Of Grassland And Forage Use Lead To Efficient, Profitable And Sustainable Ecosystems?, Oene Oenema, Cecile De Klein, Marta Alfaro

IGC Proceedings (1977-2023)

The increasing demand for safe and nutritional dairy and beef products in our globalizing world, together with the needs to increase resource use efficiency and to protect biodiversity, provide strong incentives for intensification of grassland and forage use. This paper addresses the question in the title. Firstly, we present some notions about ‘intensification of agricultural production’. Secondly, we discuss the intensification of grassland-based dairy production in The Netherlands (NL), Chile and New Zealand (NZ). Finally, we arrive at some conclusions. External driving forces and ‘the law of the optimum’ provide strong incentives for intensification, i.e., for increasing the output per …

New Frontiers And Perspectives In Grassland Technology, Jürgen Schellberg, E. Verbruggen

IGC Proceedings (1977-2023)

Grassland scientists and farmers are increasingly faced with emerging new technologies and in-formation systems that have been primarily developed by engineering sciences in particular: precision agriculture, remote sensing, geographic localization and biotechnology. Whether the implementation of any of these technologies may be beneficial in economic and ecological respect is a challenging judgment call, especially for those who have to carry over that decision on their farm. Compared to arable land, new technologies have been applied on grassland only partially and with some delay. However, as we will demonstrate, there is place for a successful implementation of new technologies in various …

Vines In The Neotropics: Phylogenomics, Biogeography And Systematics In Passion Flowers (Passiflora Subgenus Decaloba Section Decaloba), Serena Acha

Dissertations

With 600 species, Passiflora is a large, morphologically complex and broadly distributed genus in Passifloraceae that represents a major challenge to scientists interested in understanding the evolutionary history of tropical vines. Passiflora has been divided into subgenera, super sections and sections. One of the most enigmatic and species-rich (~120 spp.) groups in Passiflora is section Decaloba, which occurs in the Neotropics and is particularly diverse in Andean montane forests. In this study, we used phylogenomic and population genomic approaches to investigate the evolutionary history, biologeography, species boundaries, and taxonomy of Passiflora section Decaloba. We sampled herbarium specimens, extracted …

Regional And Historical Influences On The Spatial Distribution Of Neotropical Trees, Maria Isabel Loza

Dissertations

At small spatial scales, the composition of species assemblages depends on local conditions and the dispersal of propagules from surrounding regions. In turn, processes taking place at broad temporal and spatial scales, including changes in regional physiography and climate, shape the species pools in these source regions. This dissertation seeks to understand the effects of regional and historical processes on the spatial distribution of Neotropical tree species. In chapter 1, I investigate regional enrichment of local species assemblages testing two hypothesis: i) local species assemblages are enriched by unfiltered species pools, which are composed of all species that can …

The Missing Metric: An Evaluation Of Fungal Importance In Wetland Assessments, Megan A. Rúa

Biological Sciences Faculty Publications

To preserve wetland ecosystem function, federal and state agencies have developed assessment procedures to better manage remaining wetland areas. Currently, wetland assessments do not consider microorganisms when determining wetland quality. This is notable, because fungi are often the primary decomposers of organic material and thus important players in nutrient cycling. The objective of this study is to quantify how wetland quality, as measured using the Ohio Rapid Assessment Method (ORAM), relates to fungal community composition. We sampled soils from six depressional emergent marshes in Ohio belonging to each of the three ORAM quality categories, assessed soil physicochemical properties, and recovered …

Relation Between Relative Handgrip Strength, Chronological Age And Physiological Age With Lower Functional Capacity In Older Women, Wylker Souza Saraiva, Jonato Prestes, Silvana Schwerz Funghetto, James Wilfred Navalta, Ramires Alsamir Tibana, Dahan Da Cunha Nascimento

Integrated Health Sciences Faculty Research

Purpose: Relative handgrip strength (RHGS), Aged Based on Exercise Stress Testing (A-BEST), and chronological age were evaluated as predictors of impaired mobility in older women. Methods: Participants included 88 older women (mean age 68.13±6.02 years) referred for exercise stress testing. Estimated physiological age was computed based on exercise capacity, chronotropic reserve index, heart rate recovery, and medication that could affect heart rate. RHGS was measured using a validated handgrip hydraulic dynamometer and mobility was evaluated by timed up and go test (TUG-test). A hierarchical multiple regression predicted TUG-test performance from A-BEST, chronological age and RHGS. Results: After adjustment for diabetes, …

Relation Between Relative Handgrip Strength, Chronological Age And Physiological Age With Lower Functional Capacity In Older Women, W. Souza Saraiva, J. Prestes, S. Schwerz Funghetto, J. W. Navalta, R. A. Tibana, Dahan Da Cunha Nascimento

Kinesiology and Nutrition Sciences Faculty Research

Purpose: Relative handgrip strength (RHGS), Aged Based on Exercise Stress Testing (A-BEST), and chronological age were evaluated as predictors of impaired mobility in older women. Methods: Participants included 88 older women (mean age 68.13±6.02 years) referred for exercise stress testing. Estimated physiological age was computed based on exercise capacity, chronotropic reserve index, heart rate recovery, and medication that could affect heart rate. RHGS was measured using a validated handgrip hydraulic dynamometer and mobility was evaluated by timed up and go test (TUG-test). A hierarchical multiple regression predicted TUG-test performance from A-BEST, chronological age and RHGS. Results: After adjustment for diabetes, …

Old Order Mennonites In New York: Cultural And Agricultural Growth, Judson Reid

Journal of Amish and Plain Anabaptist Studies

New York is experiencing dramatic population growth among horse-and-buggy driving populations. Farming is recognized as essential to the maintenance of these cultures. Nationally, these groups, particularly in larger settlements, struggle to stay active in farming. However, Old Order Mennonites run contrary to trends within the plain sects as well as agriculture at large. With over 570 households, a central New York settlement of Groffdale Conference Mennonites grew by 2,700% over the last three decades. They have one of the highest percentages of their population in agriculture, operating 99% of the dairy farms in the area, yet with a herd size …

Effects Of Photopollution On Circadian Activity Rhythms, Aaron Schimer, Ting Liu, Elyse A. Bolterstein, Seth Magle, Caleb Gallemore, Elisabeth Dinello

Faculty Research and Creative Activities Symposium

Many aspects of organismal behavior and metabolism are modulated by biological clocks that oscillate with 24-hour (circadian) rhythms. These circadian clocks synchronize to environmental cues, such as cycles of light and dark, and allow organisms to anticipate changing environmental conditions and make use of temporal niches. The circadian clocks’ function, as well as the biological processes they modulate, can be altered by excess artificial lighting (photopollution). Photopollution levels in Chicago are some of the highest in the world, making it an ideal location to investigate the ecological and health impacts of nighttime light. While photopollution’s effects on specific species (e.g. …

Whole Plastome Sequencing Within Silene Section Psammophilae Reveals Mainland Hybridization And Divergence With The Balearic Island Populations, José Carlos Del Valle, Inés Casimiro-Soriguer, Mᵃ Luisa Buide, Eduardo Narbona, Justen B. Whittall

Biology

Reconstructing the phylogenetic relationships within Caryophyllaceae tribe Sileneae has been obscured by hybridization and incomplete lineage sorting. Silene is the largest genus in the Caryophyllaceae, and unraveling its evolutionary history has been particularly challenging. In order to infer the phylogenetic relationships among the five species in Silene section Psammophilae, we have performed a genome skimming approach to acquire the complete plastid genome (cpDNA), nuclear ribosomal cistron (nrDNA), and partial mitochondrial genome (mtDNA). We have included 26 populations, representing the range of each species' distribution. This section includes five morphologically similar species endemic to the Iberian Peninsula and Balearic Islands …

Ecological Responses Of Seascape Heterogeneity, Dinorah H. Chacin

USF Tampa Graduate Theses and Dissertations

A core aim of landscape ecologists as well as conservation and management practices has been to understand how processes that structure communities vary as a function of landscape context. Landscape heterogeneity (i.e. landscape composition, configuration) and fine-scale habitat characteristics can influence ecological interactions across habitat patches at a range of scales. Therefore, the main objective of this work is to apply a landscape ecology perspective to understand how seascape heterogeneity can influence demographic rates, community patterns, and ecological processes. To accomplish this overall goal, I conducted a literature review on oyster reefs from a seascape ecology perspective (Chapter 1) and …

Testing Predictability Of Disease Outbreaks With A Simple Model Of Pathogen Biogeography, Tad Dallas, Colin J. Carlson, Timothée Poisot

Faculty Publications

Predicting disease emergence and outbreak events is a critical task for public health professionals and epidemiologists. Advances in global disease surveillance are increasingly generating datasets that are worth more than their component parts for prediction-oriented work. Here, we use a trait-free approach which leverages information on the global community of human infectious diseases to predict the biogeography of pathogens through time. Our approach takes pairwise dissimilarities between countries’ pathogen communities and pathogens’ geographical distributions and uses these to predict country–pathogen associations. We compare the success rates of our model for predicting pathogen outbreak, emergence and re-emergence potential as a function …

Sustainable Solutions, Fall/Winter 2020, Issue 41

Sustain Magazine

No abstract provided.

Impact Of The Human Footprint On Anthropogenic Mortality Of North American Reptiles, Jacob E. Hill, Travis L. Devault, Jerrold L. Belant

United States Department of Agriculture Wildlife Services: Staff Publications

Human activities frequently result in reptile mortality, but how direct anthropogenic mortality compares to natural morality has not been thoroughly investigated. There has also been a limited examination of how anthropogenic reptile mortality changes as a function of the human footprint. We conducted a synthesis of causespecific North American reptile mortality studies based on telemetry, documenting 550 mortalities of known cause among 2461 monitored individuals in 57 studies. Overall 78% of mortality was the result of direct natural causes, whereas 22% was directly caused by humans. The single largest source of mortality was predation, accounting for 62% of mortality overall. …

Socioeconomic Impacts Of Illegal Unreported And Unregulated (Iuu) Fishing On Sierra Leone, Michael Tamba Fillie

World Maritime University Dissertations

No abstract provided.

Drinking Water Quality And Human Dimensions Of Cholera Patients To Inform Evidence-Based Prevention Investment In Karonga District, Malawi., Prince Kaponda, Suresh Muthukrishnan, Rory Barber, Rochelle H. Holm

Faculty and Staff Scholarship

Cholera remains a problem in sub-Saharan Africa, especially in Malawi. Our aim was to investigate drinking water source quality compared with water treatment, risk perception and cholera knowledge for patients who had reported to a health center for treatment in the 2017-2018 outbreak in Karonga District, Malawi. The study analyzed 120 drinking water samples linked to 236 cholera patients. Nearly 82% of the samples met the national criteria for thermotolerant coliforms of 50 cfu/100 ml, while 50% met the more stringent World Health Organization criteria of 0 cfu/100 ml. In terms of the human dimensions, 68% of survey respondents reported …

Effects Of Removing Background Soil Reflectance Pixels From Vegetative Index Maps For Characterization Of Corn Responses To Experimental Treatments, Ana Morales, Robert L. Nielsen, James J. Camberato

Purdue GIS Day

In contrast to traditional data collection methods that require manual sampling, vegetative index (VI) maps derived from unmanned aerial vehicles (UAV) imagery are a potential tool to characterize temporal and spatial treatment effects in a more efficient and non-destructive way. Remotely-sensed reflectance data from a growing corn crop contains pixel values associated with the above-ground plant tissue (e.g., leaves, stalks, tassels) and the underlying soil features. Background soil reflectance data potentially reduces the effectiveness of VI for characterizing crop responses to experimental treatments. Removing background soil image pixels from the larger image dataset should improve that effectiveness. The objective of …