Digital Commons Network^™

Soil Water Dynamics Within Variable Rate Irrigation Zones Of Winter Wheat, Elisa Anne Woolley

Theses and Dissertations

Understanding the spatial and temporal dynamics of soil water and crop water stress within a field is critical for effective Variable Rate Irrigation (VRI) management. Proper VRI can result in improved protection of the crop from early onset of crop water stress while minimizing runoff and drainage losses. The objectives of this study are (1) to examine zone delineation for informing irrigation recommendations from volumetric water content (VWC) and field capacity (FC) to grow similar or greater wheat yields with less water, (2) evaluate the ability to model soil and crop water dynamics within a season and within a field …

Cultural And Religious Belief Approaches Of A Tuberculosis Program For Hard-To-Reach Populations In Mentawai And Solok West Sumatera, Indonesia, Rizanda Machmud, Irvan Medison, Finny Fitry Yani

Kesmas

Tuberculosis (TB) is a leading public health concern in Indonesia. It ranks second on the list of high-burden TB countries. In West Sumatra, 47% of TB cases are undetected, late diagnosed, and received incomplete treatment because of low-level awareness and knowledge and stigma, especially among the hardest to reach populations. The study aims to identify the best communication channel to reach those who live in vulnerable and remote areas. This study was a qualitative study applying in-depth interviews to the informal leaders, health officers, cultural artists, and religious leaders across districts in Mentawai and Solok Districts, which are remote and …

Selenopidae (Arachnida: Araneae), A New Host Spider Family For The Spider Wasp Tachypompilus Ferrugineus (Say) (Hymenoptera: Pompilidae: Pompilini), Frank E. Kurczewski, Rick C. West, Sarah C. Crews, N. R. Jenzen-Jones

Insecta Mundi

Four online photographs from Oaxaca, Mexico taken by N. R. Jenzen-Jones and posted on inaturalist.org reveal Selenops sp., probably S. mexicanus Keyserling (Arachnida: Araneae: Selenopidae), as a new host spider species, genus and family for the common and widespread American spider wasp Tachypompilus fer­rugineus (Say) (rusty spider wasp). The wasp transported the immobilized spider up an exterior stucco wall of a house, dorsal side upward, walking backwards for 3 m to her nest in a gap between the wooden planking and stucco wall beneath the roof, while grasping the femur of its right pedipalp with her mandibles.

A Spatial And Multivariate Approach To Examining Effects Of Urbanization On Nitrogen Sources, Organic Matter Inputs, And Trophic Structure In Streams Of Cobb And Paulding Counties, Georgia., Katharine Horning

Master of Science in Integrative Biology Theses

Urbanization and land use changes have a negative effect on streams often causing numerous physical changes in stream morphology, a change in nutrient concentrations, and altered ecosystems contributing to a loss of habitat, decreased biodiversity, and loss of stability for ecosystem function (Walsh et al., 2005; Meyer et al., 2005; Cardinale and Palmer, 2012). The use of stable isotope analysis for monitoring could be valuable because it accounts for temporal integration from anthropogenic wastewater inputs, characterized by a shift in the abundance of ¹⁵N. This project had three main objectives: (1) to examine how nitrogen and carbon sources are …

Trilepisium (Moraceae): Four New Species From Madagascar, Shawn Kelley

Theses

Trilepisium is a genus of tree with two member species: T. madagascariense and T. gymnandrum. This genus shows diversity in habit and morphology greatly exceeding that expected of a genus with two member species. Concerted collection efforts since the last revision have suggested there are several unrecognized species within Trilepisium and a revision is needed. Chapter one of this thesis details the history of this taxanomically challenging genus and presents the results of our study of 600 Malagasy herbarium specimens. Trilepisium is more adequately circumscribed as containing 17 species, 11 of which are new to science. Chapter two contains …

The Birds Of The Nebraska Sandhills, Paul A. Johnsgard, Josef Kren

Zea E-Books Collection

This book provides basic information on all the species of birds that have been reliably reported from the Nebraska Sandhills region as of 2020. They include 46 permanent residents, 125 summer breeders, 125 migrants, and 102 rare or accidental species, totaling 398 species. Information on status, migration, and habitats is provided for all but the very rare and accidental species. There are also descriptions of 46 refuges, preserves, and other public-access natural areas in the region and seven suggested birding routes. The text contains more than 90,000 words and over 250 literature references along with more than 20 drawings, 9 …

Function, History, And Ecology In The Exceptional Radiation Of Murine Rodents, Jonathan Allen Nations

LSU Doctoral Dissertations

Life’s diversity is not spread evenly across all lineages, and this unevenness is thought to be due, in part, to a few interwoven factors: biogeographic history, the evolution of successful functional traits, and the ecological opportunity these traits afford. My dissertation focuses on the evolution of a species-rich and morphologically diverse clade of mammals, the murine rodents (Murinae; Muridae; Rodentia) to address 1) morphological adaptations associated with niche transition to arboreality 2) the effect of repeated ecological transitions on murine diversification, and 3) the role of atypical ecological niches in the assembly of hyperdiverse communities. My dissertation has revealed that …

Effects Of Fence On Daily Variation Of Co2 Flux From The Soil In Subalpine Meadow Of Xinjiang, Ping'an Jiang

IGC Proceedings (1977-2023)

No abstract provided.

Spatial And Temporal Determinants Associated With Eastern Equine Encephalitis Virus Activity In Florida, Kristi M. Miley

USF Tampa Graduate Theses and Dissertations

Eastern Equine Encephalitis virus (EEEV) is considered the most pathogenic mosquito-borne illness in the United States. Human mortality has been estimated to range between 35 to 75%, with horses experiencing mortality rates greater than 90%. A large number of EEEV cases occur in Florida. Though we have come a long way since the first human infection was identified in the 1930s, there is still much to learn regarding the virus’s ability to maintain transmission year-round in Florida. Phylogenic studies support that Florida may serve as the geographic reservoir for EEEV. This research investigated spatiotemporal and ecological variables associated with risk …

Multidecadal Analysis Of Beach Loss At The Major Offshore Sea Turtle Nesting Islands In The Northern Arabian Gulf, Rommel H. Maneja, Jeffrey D. Miller, Wenzhao Li, Rejoice Thomas, Hesham El-Askary, Sachi Perera, Ace Vincent B. Flandez, Abdullajid U. Basali, Joselito Francis A. Alcaria, Jinoy Gopalan, Surya Prakash Tiwari, Mubarak Al-Jedani, Perdana K. Prihartato, Ronald A. Loughlan, Ali Qasem, Mohamed A. Qurban, Wail Falath, Daniele Struppa

Mathematics, Physics, and Computer Science Faculty Articles and Research

Undocumented historical losses of sea turtle nesting beaches worldwide could overestimate the successes of conservation measures and misrepresent the actual status of the sea turtle population. In addition, the suitability of many sea turtle nesting sites continues to decline even without in-depth scientific studies of the extent of losses and impacts to the population. In this study, multidecadal changes in the outlines and area of Jana and Karan islands, major sea turtle nesting sites in the Arabian Gulf, were compared using available Kodak aerographic images, USGS EROS Declassified satellite imagery, and ESRI satellite images. A decrease of 5.1% and 1.7% …

A Multi‑Disciplinary Comparison Of Great Ape Gut Microbiota In A Central African Forest And European Zoo, Victor Narat, Katherine R. Amato, Noémie Ranger, Maud Salmona, Séverine Mercier‑Delarue, Stephanie Rupp, Philippe Ambata, Richard Njouom, François Simon, Tamara Giles‑Vernick, Jérôme Legoff

Publications and Research

Comparisons of mammalian gut microbiota across different environmental conditions shed light on the diversity and composition of gut bacteriome and suggest consequences for human and animal health. Gut bacteriome comparisons across different environments diverge in their results, showing no generalizable patterns linking habitat and dietary degradation with bacterial diversity. The challenge in drawing general conclusions from such studies lies in the broad terms describing diverse habitats (“wild”, “captive”, “pristine”). We conducted 16S ribosomal RNA gene sequencing to characterize intestinal microbiota of free-ranging sympatric chimpanzees and gorillas in southeastern Cameroon and sympatric chimpanzees and gorillas in a European zoo. We conducted …

Landscape-Scale Differences Among Cities Alter Common Species’ Responses To Urbanization, Mason Fidino, Travis Gallo, Elizabeth W. Lehrer, Maureen H. Murray, Cria Kay, Heather A. Sander, Brandon Macdougall, Carmen M. Salsbury, Travis J. Ryan, Julia L. Angstmann, J. Amy Belaire, Barbara Dugelby, Chris Schell, Theodore Stankowich, Max Amaya, David Drake, Sheryl H. Hursh, Adam A. Ahlers, Jacque Williamson, Laurel M. Hartley, Amanda J. Zellmer, Kelly Simon

Scholarship and Professional Work - LAS

Understanding how biodiversity responds to urbanization is challenging, due in part to the single-city focus of most urban ecological research. Here, we delineate continent-scale patterns in urban species assemblages by leveraging data from a multi-city camera trap survey and quantify how differences in greenspace availability and average housing density among 10 North American cities relate to the distribution of eight widespread North American mammals. To do so, we deployed camera traps at 569 sites across these ten cities between 18 June and 14 August. Most data came from 2017, though some cities contributed 2016 or 2018 data if it was …

Urbanization And Fragmentation Mediate Temperate Forest Carbon Cycle Response To Climate, Andrew Reinmann, Ian A. Smith, Jonathan R. Thompson, Lucy R. Hutyra

Advanced Science Research Center

Forest fragmentation is ubiquitous across urban and rural areas. While there is mounting evidence that forest fragmentation alters the terrestrial carbon cycle, the extent to which differences in ambient growing conditions between urban and rural landscapes mediate forest response to fragmentation and climate remains unexamined. This study integrates field measurements of forest structure, growth, and soil respiration with climate data and high-resolution land-cover maps to quantify forest carbon storage and sequestration patterns along edge-to-interior gradients. These data were used to contrast the response of temperate broadleaf forests to non-forest edges within rural and urban landscapes. We find that forest growth …

Assessing Foods And Nutrition Programming Needs Of Family And Consumer Sciences Agents In North Carolina, Lindsey Haynes-Maslow, Zandra Alford, Carolyn Dunn

Journal of Human Sciences and Extension

North Carolina Extension specialists conducted a needs assessment of Family and Consumer Sciences (FCS) agents to determine their foods and nutrition programming needs. Researchers examined agent and community needs, agent-offered programming, and barriers and facilitators to program implementation. Results will help inform the development of targeted agent trainings, materials, programs, and technical assistance related to foods and nutrition. The study is intended to help maximize the success of FCS foods and nutrition programming by supporting agents in delivering high-quality, evidence-based programs. This paper reviews study implementation, results, and relevant implications for other Extension professionals interested in performing a similar analysis.

The Use Of Spanish Moss As A Biological Indicator To Examine Relationships Between Metal Air Pollution, Vegetation Cover, And Environmental Equity In Tampa, Florida, Yousif Abdullah

USF Tampa Graduate Theses and Dissertations

Studies of inequality in exposure to less common air pollutants, like metals, are often limited by the costs of high spatial resolution measurements. Spanish moss (Tillandsia usneoides) is a promising bioindicator for measuring air pollution due to its lower cost, enabling capture of time-average environmental concentrations at high spatial resolution. This study had three major aims. First, I aimed to use Spanish moss as a bioindicator to characterize ambient concentrations of selected metals (Ti, Cr, Mn, Co, Ni, Cd, Hg, Pb, As, and Sb) in Tampa, Florida. My second goal was to determine the impact of vegetation cover on metals …

College Of Natural Sciences Newsletter, November 2020, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Volume 1. Issue 10

Content:

Dean’s Update P.1
Awards & Recognition P.2
Student Club Spotlight P.3
Open PRAIRIE | Interest in Science P.4
Bioethics Lecture P.5
External Advisory Board P.6
Science as Art Competition P.7

Speciation-By-Depth On Coral Reefs: Sympatric Divergence With Gene Flow Or Cryptic Transient Isolation?, Carlos Prada, Michael E. Hellberg

Faculty Publications

The distributions of many sister species in the sea overlap geographically but are partitioned along depth gradients. The genetic changes leading to depth segregation may evolve in geographic isolation as a prerequisite to coexistence or may emerge during primary divergence leading to new species. These alternatives can now be distinguished via the power endowed by the thousands of scorable loci provided by second-generation sequence data. Here, we revisit the case of two depth-segregated, genetically isolated ecotypes of the nominal Caribbean candelabrum coral Eunicea flexuosa. Previous analyses based on a handful of markers could not distinguish between models of genetic exchange …

Comprehensive Molecular Screening In A Cohort Of Young Men Who Have Sex With Men And Transgender Women: Effect Of Additive Rectal Specimen Source Collection And Analyte Testing, Erik Munson, Alyssa Reynoso, Morena Pass, Kathleen Buehler, Daniel Ryan, Antonia Clifford, Ethan Morgan, Brian Mustanski

Clinical Lab Sciences Faculty Research and Publications

Background

This study's purposes were to characterize detection rates of several sexually transmitted infection (STI) agents and describe the effect additional specimen source and analyte screening has on STI detection within a cohort of young men who have sex with men and transgender women.

Methods

Within a 16-month interval, 1966 encounters involved dual urine and rectal swab submissions assessed by commercial transcription-mediated amplification–based assays for Chlamydia trachomatis and Neisseria gonorrhoeae and by off-label transcription-mediated amplification–based Trichomonas vaginalis and Mycoplasma genitalium testing. Identification of STI carriers used algorithms involving Food and Drug Administration–cleared screening methods, laboratory-modified testing for extraurogenital C. trachomatis …

Small Herbaria Contribute Unique Biogeographic Records To County, Locality, And Temporal Scales, Travis D. Marsico, Erica R. Krimmel, J. Richard Carter, Emily L. Gillespie, Phillip D. Lowe, Ross Mccauley, Ashley B. Morris, Gil Nelson, Michelle Smith, Diana L. Soteropoulos, Anna K. Monfils

Arkansas Biosciences Institute

With digitization and data sharing initiatives underway over the last 15 years, an important need has been prioritizing specimens to digitize. Because duplicate specimens are shared among herbaria in exchange and gift programs, we investigated the extent to which unique biogeographic data are held in small herbaria vs. these data being redundant with those held by larger institutions. We evaluated the unique specimen contributions that small herbaria make to biogeographic understanding at county, locality, and temporal scales.

Trypa-No! Contributes To The Elimination Of Gambiense Human African Trypanosomiasis By Combining Tsetse Control With “Screen, Diagnose And Treat” Using Innovative Tools And Strategies, Joseph Mathu Ndung’U, Alain Boulangé, Albert Picado, Albert Mugenyi, Allan Mortensen, Andrew Hope, Brahim Guihini Mollo, Bruno Bucheton, Charles Wamboga, Charles Waiswa, Dramane Kaba, Enock Matovu, Fabrice Courtin, Gala Garrod, Geoffrey Gimonneau, Georgina Bingham, Hassane Mahamat Hassane, Inaki Tirados, Isabel Saldanha, Jacques Kabore, Jean Baptiste Rayaisse, Jean Mathieu Bart, Jessica Lingley, Johan Esterhuizen, Joshua Longbottom, Justin Pulford, Lingue Kouakou, Lassina Sanogo, Lucas Cunningham, Mamadou Camara, Mathurin Koffi, Michelle Stanton, Mike Lehane, Moise Saa Kagbadouno, Oumou Camara, Paul Bessell, Peka Mallaye, Philippe Solano, Richard Selby, Sophie Dunkley

Department of Entomology: Faculty Publications

Gambiense human African trypanosomiasis (g-HAT) is the chronic form of sleeping sickness caused by Trypanosoma brucei gambiense in West and Central Africa, while Trypanosoma brucei rhodesiense causes an acute form in eastern Africa. g-HAT is targeted for elimination as a public health problem by 2020 and 0 transmission by 2030 [1,2]. Control of g-HAT is largely based on identification and treatment of infected individuals, supplemented by control of the tsetse fly vectors [3]. There has been growing evidence that when both tsetse control and case identification activities are carried out simultaneously in the same geographies, elimination of the disease is …

Analysis Of The Variables Affecting Plant Species Richness In Deserts, Eli R. Kallison, Ellen Thompson, Maddison Keen, Rusty Newman

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

There are many hypotheses that attempt to explain patterns of species diversity in different environments. Deserts are a great place to study changes in species richness because they are relatively nutrient bare and exhibit low precipitation. This barebones environment means that slight shifts in climate and geography may lead to clear changes in species richness. We investigate how temperature, precipitation, water and light availability, latitude, elevation and other variables affect plant species richness in 20 deserts.

Distribution Of Crickets (Subfamily: Phalangopsinae) In Caves Of Baratang Island, Andaman And Nicobar Islands, India, Amruta Dhamorikar, Dhanusha Kawalkar, Shirish Manchi

International Journal of Speleology

Cave-dwelling organisms share different ecological and evolutionary relationships with caves. Based on these interactions, they are categorized as troglobites, troglophiles, and trogloxenes. In India, caves are meagerly explored, and thus cave study is in its infancy in India. Through the present study, we attempted to understand and model the distribution of crickets (Family Phalangopsidae), a critical group of insects - being the primary consumers in the cave ecosystems. We sampled seven caves using belt transects (N = 184; total area covered = 1294.9 m²) with 1 m width. During the survey, we encountered 818 individual crickets (116.85 ± …

#Eggs: Social And Online Media-Derived Perceptions Of Egg-Laying Hen Housing, Nicole Olynk Widmar, Courtney Bir, Christopher Wolf, John Lai, Yangxuan Liu

Department of Agricultural Economics Faculty Publications

Enormous quantities of data are generated through social and online media in the era of Web 2.0. Understanding consumer perceptions or demand efficiently and cost effectively remains a focus for economists, retailer/consumer sciences, and production industries. Most of the efforts to understand demand for food products rely on reports of past market performance along with survey data. Given the movement of content-generation online to lay users via social media, the potential to capture market-influencing shifts in sentiment exists in online data. This analysis presents a novel approach to studying consumer perceptions of production system attributes using eggs and laying hen …

Grassland And Water Resources: Recent Trends And Future Challenges In Temperate Zones, Benoît Marc

IGC Proceedings (1977-2023)

No abstract provided.

Long-Distance Cycling Routes: Economic Impacts, Best Practices, And Marketing Strategies, Elizabeth Depew, Jordan Smith

All Current Publications

Strategic efforts from state tourism offices and local governments amplify the economic benefits of bicycle tourism and help to define the character and identity of rural communities. We synthesize research on this topic as a guide to the economic benefits that come from bicycle tourism, and offer best practices for developing long distance cycling routes that support bicycle tourism.

Geographic And Intra-Racial Disparities In Early-Onset Colorectal Cancer In The Seer 18 Registries Of The United States, Wesal H. Abualkhair, Meijiao Zhou, Carolina O. Ochoa, Leonel Lacayo, Caitlin Murphy, Xiao Cheng Wu, Jordan J. Karlitz

School of Medicine Faculty Publications

Background: Although early-onset colorectal cancer (EOCRC) incidence rates (IRs) are increasing, geographic and intra-racial IR disparities are not well defined. Methods: 2000-2015 Surveillance, Epidemiology, and End Results (SEER) program CRC IR Analysis (170,434 cases) was performed from ages 30 to 60 in four US regions, 18 individual registries, metropolitan and nonmetropolitan locations and stratified by race. Analyses were conducted in 1-year and 5-year age increments. Results: Wide US regional EOCRC IR variations exist: For example, age 45 IRs in the south are 26.8/100,000, 36.0% higher than the West, 19.7/100,000 (p < 0.0001). Disparities magnify between individual registries: EOCRC IRs in highest risk registries were 177-348% (Alaska Natives), 75-200% (Hawaii), 76-128% (Louisiana), and 61-125% (Kentucky) higher than lowest risk registries depending on age. EOCRC IRs are 18.2%-25.6% higher in nonmetropolitan versus metropolitan settings. Wide geographic intra-racial disparities exist. Within the White population, the greatest IR difference (78.8%) was between Kentucky (5.9/100,000) and Los Angeles (3.3/100,000) in 30- to 34-year-olds (p <.0001). Within the Black population, the greatest difference (136.2%) was between rural Georgia (30.7/100,000) and California excluding San Francisco-Oakland/San Jose-Monterey/Los Angeles (13/100,000) in 40- to 44-year-olds (p = 0003). Conclusion: Marked geographic EOCRC disparities exist with disproportionately high IRs in Alaska Natives, Hawaii, and southern registries. Geographic intra-racial disparities are present within White and Black populations. In Blacks, there are disproportionately high EOCRC IRs in rural Georgia. Although vigilance is required in all populations, attention must be paid to these higher risk populations. Potential interventions include assuring early investigation of symptoms, targeting modifiable risk factors and utilizing earlier age 45 screening options supported by some guidelines.

Description Of A New Species Of Chrysina Kirby (Coleoptera: Scarabaeidae: Rutelinae) From The Sierra Azul, Oaxaca, Mexico, A New Synonymy, And Notes On Chrysina Species Found In The Sierra Azul, José Monzón Sierra, Julian Federico Blackaller-Bages, David C. Hawks

Insecta Mundi

A new species of Chrysina Kirby, C. clavellina Monzón, Blackaller, and Hawks (Coleoptera: Scarabaeidae: Rutelinae: Rutelini) is described from Santiago Clavellinas in the Sierra Azul in Oaxaca, Mexico. Chrysina cosijoezai (Ramírez-Ponce and Curoe) is placed as a junior synonym of C. lacordairei (Boucard), and notes on the Chrysina fauna of this mountain range are included.

Se describe una nueva especie de Chrysina Kirby, C. clavellina Monzón, Blackaller, y Hawks (Coleoptera: Scarabaeidae: Rutelinae) de Santiago Clavellinas en la Sierra Azul en Oaxaca, México. Chrysina cosijoezai (Ramírez-Ponce y Curoe) se sitúa como un sinónimo de C. lacordairei (Boucard) y se incluyen notas …

Swimming Of Pelagic Snails: Kinematics And Fluid Dynamics, Ferhat Karakas

USF Tampa Graduate Theses and Dissertations

Pteropods (also known as sea butterflies or sea angels), are holoplanktonic marine snails which swim by flapping a pair of extremely flexible wings. The wings are modified from the molluscan foot and the wing motions are supported by the fluid pressure without any rigid support. Sea angels (gymnosome pteropods) are completely naked; in contrast, sea butterflies (thecosome pteropods) have negatively buoyant aragonite shells which vary in geometry and size among different species. Pteropods are seasonally abundant in the ocean, and an important food source for the other zooplanktons, fishes, and whales. Though studies have been conducted regarding their biology, ecology, …

Spatial And Temporal Dynamics Of Human–Wildlife Conflicts In The Kenya Greater Tsavo Ecosystem, Joseph M. Mukeka, Joseph O. Ogutu, Erustus Kanga, Eivin Røskaft

Human–Wildlife Interactions

Biodiversity conservation in developing countries is faced with many and mounting challenges, including increasing human–wildlife conflicts (HWCs). In Africa and other developing countries, increasing HWCs, particularly those adjacent to protected areas, can adversely affect local stakeholder perceptions and support for conservation. We analyzed HWC reports for multiple wildlife species compiled >23 years (1995–2017) from the Greater Tsavo Ecosystem (GTE) in Kenya to determine HWC trends. The GTE is the largest protected area in Kenya, covering 22,681 km². Overall, 39,022 HWC incidents were reported in 6 GTE regions (i.e., Taveta, Mutomo, Kibwezi, Rombo, Galana, Bachuma). The 5 wildlife species …

Using Gis And Geostatistics To Study Spatial Variation Of Soil Test Phosphorus In Grassland, Weijun Fu, H. Tunney, C. Zhang

IGC Proceedings (1977-2023)

No abstract provided.