Digital Commons Network^™

Drivers Of Flight Performance Of California Condors (Gymnogyps Californianus), Sophie R. Bonner, Sharon A. Poessel, Joseph C. Brandt, Molly T. Astell, James R. Belthoff, Todd E. Katzner

Biology Faculty Publications and Presentations

Flight behavior of soaring birds depends on a complex array of physiological, social, demographic, and environmental factors. California Condors (Gymnogyps californianus) rely on thermal and orographic updrafts to subsidize extended bouts of soaring flight, and their soaring flight performance is expected to vary in response to environmental variation and, potentially, with experience. We collected 6298 flight tracks described by high-frequency GPS telemetry data from five birds ranging in age from 1 to 19 yr old and followed over 32 d in summer 2016. Using these data, we tested the hypothesis that climb rate, an indicator of flight performance, …

The Global Virome In One Network (Virion): An Atlas Of Vertebrate-Virus Associations, Colin J. Carlson, Rory J. Gibb, Gregory F. Albery, Liam Brierley, Ryan P. Connor, Tad Dallas, Evan A. Eskew, Anna C. Fagre, Maxwell J. Farrell, Hannah K. Frank, Renata L. Muylaert, Timothée Poisot, Angela L. Rasmussen, Sadie J. Ryan, Stephanie N. Seifert

Faculty Publications

Data that catalogue viral diversity on Earth have been fragmented across sources, disciplines, formats, and various degrees of open sharing, posing challenges for research on macroecology, evolution, and public health. Here, we solve this problem by establishing a dynamically maintained database of vertebrate-virus associations, called The Global Virome in One Network (VIRION). The VIRION database has been assembled through both reconciliation of static data sets and integration of dynamically updated databases. These data sources are all harmonized against one taxonomic backbone, including metadata on host and virus taxonomic validity and higher classification; additional metadata on sampling methodology and evidence strength …

Importance Of Local Weather And Environmental Gradients On Demography Of A Broadly Distributed Temperate Frog, Hallie Lingo, James C. Munger

Biology Faculty Publications and Presentations

Amphibian populations are sensitive to environmental temperatures and moisture, which vary with local weather conditions and may reach new norms and extremes as contemporary climate change progresses. Using long-term (11–16 years) mark-recapture data from 10 populations of the Columbia spotted frog (Rana luteiventris) from across its U.S. range, we addressed hypotheses about how demographic relationships to weather depend upon a population’s position along climate gradients. We estimated the effect of seasonal weather on annual survival probability and recruitment rates both within populations and across the species’ range from subalpine forests to semi-arid deserts. We calculated population-specific weather variables …

Global Education In Stem And Healthcare: Implications Of Covid-19, Jessica Hallet, Santanu De

Biology Faculty Articles

The Coronavirus Infectious Disease 2019 (COVID-19) was declared a pandemic in March of 2020. Since then, most schools, colleges, and universities across the globe stopped delivering classes face-to-face and transitioned into virtual modalities of instruction. This reformation of academics has had an impact on every field of study, especially those students in the areas of Science, Technology, Engineering, and Mathematics (STEM), and in the realm of healthcare education. Ranging from middle/high school to undergraduate and graduate programs, STEM degrees require intensive curricula integrating extensive lectures on theoretical topics and laboratory exercises to apply those concepts in a practical setting. Likewise, …

Geospatial Assessment Of Groundwater Quality With The Distinctive Portrayal Of Heavy Metals In The United Arab Emirates, Imen Ben Salem, Yousef Nazzal, Fares M. Howari, Manish Sharma, Jagadish Kumar Mogaraju, Cijo M. Xavier

All Works

Groundwater is a valuable resource, and its quality is critical to human survival. Optimal farming and urbanization degraded groundwater reserves. This research investigates and reports the spatial variability of selected heavy metals developed in the Liwa area of the United Arab Emirates. Forty water samples were collected from existing wells and analyzed for different elements. Principal components analysis was applied to a subgroup of the data set in terms of their usefulness for determining the variability of groundwater quality variables. Geographic information systems were used to produce contour maps to analyze the distribution of heavy metals. Ordinary kriging was used …

The Diversity Of Norm Psychologies: A Challenge For The Law, Paul Sheldon Davies

William & Mary Law Review

Can we craft a coherent set of laws applicable to populations with deep cultural diversity? The full force of this question—call it the generalization challenge—has emerged recently thanks to advances in the sciences of the human, especially theories of neuroscience and psychology framed by theories of biological and especially cultural evolution. The goal of this Article is to describe enough of those advances to make clear the force of the challenge. The motivation is simple: as we endeavor to imagine the future of law in light of discoveries in neuroscience and related disciplines, being apprised of the generalization challenge may …

Making (Remote) Sense Of Lianas, Geertje M. F. Van Der Heijden, Ashley D. C. Proctor, Kim Calders, Chris J. Chandler, Richard Field, Giles M. Foody, Sruthi M. Krishna Moorthy, Stefan A. Schnitzer, Catherine E. Waite, Doreed S. Boyd

Biological Sciences Faculty Research and Publications

1. Lianas (woody vines) are abundant and diverse, particularly in tropical ecosystems. Lianas use trees for structural support to reach the forest canopy, often putting leaves above their host tree. Thus they are major parts of many forest canopies. Yet, relatively little is known about distributions of lianas in tropical forest canopies, because studying those canopies is challenging. This knowledge gap is urgent to address because lianas compete strongly with trees, reduce forest carbon uptake and are thought to be increasing, at least in the Neotropics.
2. Lianas can be difficult to study using traditional field methods. Their pliable stems often twist …

Ecopsychologists' Vital Importance In The Time Of Climate Crises, Nicole B. Auckerman Psyd

Antioch University Dissertations & Theses

Ecopsychology is a systems-based philosophy that expands the therapeutic lens to include client interactions with and perceptions of the natural environment as an integral element of well-being or pathology. Ecopsychology, known forward as EP, also looks at the pathology of our culture and what kind of diagnoses lead to practices that put our planet at risk. In recent decades, the field has amassed a substantial amount of empirical evidence supporting its effectiveness but remains largely underutilized. First generation EP suggested a cultural reordering shifting away from consumer culture and reordering our way of life. Second generation posits working within the …

The Evolutionary History Of An Accidental Model Organism, The Leopard Gecko Eublepharis Macularius (Squamata: Eublepharidae), Ishan Agarwal, Aaron M. Bauer, Tony Gamble, Varad B. Giri, Daniel Jablonski, Akshay Khandekar, Pratyush P. Mohapatra, Rafaqat Masroor, Anurag Mishra, Uma Ramakrishnan

Biological Sciences Faculty Research and Publications

The leopard gecko, Eublepharis macularius, is a widely used model organism in laboratory and experimental studies. The high phenotypic diversity in the pet trade, the fact that the provenance of different breeding lines is unknown, and that distinct Eublepharis species are known to hybridize, implies that the continued use of E. macularius as a model requires clarity on the origin of the lineages in the pet trade. We combine multi-locus sequence data and the first range-wide sampling of the genus Eublepharis to reconstruct the evolutionary history of the Eublepharidae and Eublepharis, with an updated time-tree for the Eublepharidae. …

An Analysis Of The Effects Of Large Wildfires On The Hydrology Of Three Small Catchments In Central Chile Using Tritium-Based Measurements And Hydrological Metrics, Francisco Balocchi, Diego Rivera, José Luis Arumi, Uwe Morgenstern, Donald A. White, Richard P. Silberstein, Pablo Ramírez De Arellano

Research outputs 2022 to 2026

Wildfires are an important disturbance affecting catchments’ soil and hydrological processes within. Wildfires are predicted to increase in both frequency and severity under climate change. Here, we present measurements of tritium (3H) in surface water of three streams before and after the ‘las Máquinas’ megafire of January 2017 in central Chile and streamflow metrics. Mean transit times (MTTs) of water were calculated in three coastal catchments with the Mediterranean climate type, covered by native forest, a mixture of native forest and Pinus radiata D. Don, and P. radiata. Lumped parameter models (LPMs) were used to obtain MTTs. Tritium activities from …

Pastoralist Conservation: Local Ecological Knowledge And Collective Action For Grassland Conservation In Sierra De Segura (Spain), P. Sanosa-Cols, F. Ravera, F. Dominguez, M. Ventura

IGC Proceedings (1977-2023)

Even if Pastoralism is not practised anymore by a majority of families in the Sierra de Segura (south-eastern Andalusia, Spain), it is still considered a paradigmatic way of life and management of its highlands and a key cultural heritage deeply rooted in local identity. In this article we explore two pastoral communities of this region, Santiago and Pontones, with their body of situated knowledge of the territory and natural resources, which helps pastoralists to organize their livelihoods, while requiring collective organization to manage access to grasslands. Through an ethnographic research based on participant observation and in-depth interviews, we explore the …

Endangered Sustainable Innovation: Indigenous Milk Hygiene And Preservation Techniques By Maasai Too Valuable To Lose, J. Y. Laffa, C. R. Mcculloch, D. Schoder

IGC Proceedings (1977-2023)

The indigenous Parakuyo Maasai communities of Tanzania are traditional pastoralists who depend on fresh cow’s milk as a staple food. However, the arid climate and a lack of clean water challenge milk production and conventional milk hygiene practices.

By conducting informational interviews in eight Parakuyo Maasai regions and 13 districts of Tanzania we sought to identify the key indigenous plants preferred and establish their traditional manner of use. A semi-structured questionnaire was designed to: (i) determine the plants used, (ii) the parts used, (iii) methods of preparation and utensil smoking, (iv) therapeutic applications and associated health benefits of these plants, …

Comparative Analysis Of Cbrm Cases In Kenya, Ethiopia And Tunisia, I. N. Nganga, L. W. Robinson, B. Eba, F. Flintan, E. M. Ontiri, M. Sghaier, N. H. Abdu, S. S. Moiko

IGC Proceedings (1977-2023)

In various countries, development and conservation organizations and national policymakers have been experimenting with ways of applying the community-based natural resource management approach to the unique social and biophysical characteristics of pastoralist rangeland settings, with mixed results. We carried out comparative case study research on community-based rangeland management (CBRM) in a variety of settings in Ethiopia, Kenya and Tunisia with the objective of identifying what kinds of strategies and methods work in which social and ecological contexts. We used an “options by context” approach guided by a research protocol that includes key variables and descriptors for characterizing the implementing organization’s …

An Analysis Of Community-Based Values Informing Land Management On The Midwestern Prairie Band Potawatomi Nation Of Kansas, Usa, Heidi Mehl, Diana L. Restrepo-Osorio, Melinda Howard, Cynthia Annett

IGC Proceedings (1977-2023)

The focus of this study is to examine the interface between land management practices and values within a tribal community in rural midwestern North America. The Prairie Band Potawatomi Nation (PBPN) reside on a tribal reservation with a checkerboard distribution amongst private, non-tribal landowners. Previous studies have indicated that landowners may have different value-systems leading to variations in land-management practices. This can impose discontinuous land management in areas within shared biological boundaries, such as watersheds, especially between tribal and non-tribal entities. Preliminary spatial analysis in and around the PBPN landscape determined that the tribally-managed lands present more vegetative cover per …

The First Report Of Lissomus Dalman (Coleoptera: Elateridae: Lissominae) From The Greater Antilles, With Two New Species From The Dominican Republic, Paul J. Johnson

Insecta Mundi

Lissomus quisqueya new species and L. woodruffi new species are described. Both species are reported from the Dominican Republic on the island of Hispaniola. These are the first species of Lissomus Dalman reported from the Greater Antilles. Lissomus quisqueya is recorded from montane mesic forests in the Cordillera Central from Dajadon and La Vega provinces. Lissomus woodruffi is recorded from Barahona, Independencia and Pedernales provinces from montane mesic forest in the Sierra de Bahoruco. Morphologically, these species are most similar to members of the L. discedens Bonvouloir species group from Mesoamerica and South America. Known sites of occurrence of L. …

Making The Case For Rangelands To Become The Poster Child Of The Sdgs: How Rangelands Provide Fertile Ground For An Interconnected Approach To The Three Pillars Of Sustainable Development, B. Jones

IGC Proceedings (1977-2023)

The Sustainable Development Goals (SDGs) are a collection of 17 ambitious goals set by global leaders to transform the world by 2030 and create a sustainable future for all. They are founded on the three pillars of sustainable development – environmental, economic and social sustainability, or as they are more colloquially known, “people, planet and profit”. Creating a better world requires an integrated approach that simultaneously improves livelihoods and reduces inequalities whilst dramatically reducing environmental damage.

This paper argues that rangelands are an ideal arena for showcasing the SDGs because they are, by their very nature, interconnected landscapes in which …

The Planted Catalog: The Role Of The Botanical Garden In Botany, Douglas Tuers

Journal of the South Carolina Academy of Science

This article will investigate the role of the botanical garden in botany. What its role is and how it fills it. This article will take the Missouri Botanical Garden as a case study, drawing heavily from archival material compromised mostly of letters between Henry Shaw and the prominent botanists of his day. This study also draws on the prominent histories of the Missouri Botanical Garden. The analysis use the philosophical tradition around reference in logic and language. This study argues that the botanical garden is a bridge between locality and herbaria. The order of the flora travels to the locality …

Scientific And Technological Reasons, Contents And Corresponding Policies Of Constructing “Coastal Grass Belt”, Weihua Xu, Jianlin Wang, Xiaojing Liu, Qi Xie, Weicai Yang, Xiaofeng Cao, Zhensheng Li

Bulletin of Chinese Academy of Sciences (Chinese Version)

Not only the grain rations must be secured absolutely in China, but also the feed grains. However, the limited arable land resource in China determines that grass planting shall not "compete for land with staple food". Planting high quality salt-tolerant forage grass on the saline wasteland and developing animal husbandry production can not only meet the demand of increasing proportion of animal protein in Chinese diet structure, but more importantly, it can help to solve the problems of insufficient forage planting and import over-dependence. Hence it plays an important role in guaranteeing national food security. Therefore, it is necessary to …

Biogeosciences Perspectives On Integrated, Coordinated, Open, Networked (Icon) Science, D. Dwivedi, A. L. D. Santos, M. A. Barnard, T. M. Crimmins, A. Malhotra, K. A. Rod, K. S. Aho, S. M. Bell, B. Bomfim, F. Q. Brearley, H. Cadillo-Quiroz, J. Chen, C. M. Gough, E. B. Graham, C. R. Hakkenberg, L. Haygood, G. Koren, E. A. Lilleskov, L. K. Meredith, S. Naeher, Z. L. Nickerson, O. Pourret, H.-S. Song, M. Stahl, N. Taş, R. Vargas, S. Weintraub-Leff

Department of Food Science and Technology: Faculty Publications

This article is composed of three independent commentaries about the state of Integrated, Coordinated, Open, Networked (ICON) principles in the American Geophysical Union Biogeosciences section, and discussion on the opportunities and challenges of adopting them. Each commentary focuses on a different topic: (a) Global collaboration, technology transfer, and application (Section 2), (b) Community engagement, community science, education, and stakeholder involvement (Section 3), and (c) Field, experimental, remote sensing, and real-time data research and application (Section 4). We discuss needs and strategies for implementing ICON and outline short- and long-term goals. The inclusion of global data and international …

What Kigali’S Open‑Air Markets Reveal About Achieving Food And Nutrition Security: The Role Of African Indigenous Crops, Eugene Baraka, Mary S. Willis, Brice A. Ishimwe

Department of Nutrition and Health Sciences: Faculty Publications

Background: Household dietary diversity in Rwanda remains low and significantly contributes to the double burden of malnutrition. Rwanda has one of the highest under five stunting rates globally, and malnutrition remains one of the most pressing public health issues; therefore, factors that shape food and nutrition security are of utmost concern. Globally, the variety of foods available in open-air markets has been shown to affect dietary diversity. Furthermore, the consumption of indigenous foods can contribute to a diverse diet and improve nutrition status. At present, there are limited data on foods available for purchase in open-air markets in Africa. …

Harnessing The Four-Dimensional Ecology Education Framework To Redesign An Introductory Ecology Course In A Changing Higher Education Landscape, Nathan Ruhl, Patrick Crumrine, Jennifer Oberle, Courtney Richmond, Shelly Thomas, Sara Wright

School of Earth & Environment Departmental Research

As higher education undergoes rapid and fundamental change, eco-educators need to be prepared to promote the inclusion of the ecological sciences in the biological sciences curriculum of the future. Here, we present an instructional alignment for an introductory ecology course, which is informed by and integrated with the Four-Dimensional Ecology Education (4DEE) Framework. Our instructional alignment was created collaboratively among faculty involved in teaching the course and emphasizes the relevance and utility of the ecological sciences. We believe that this approach positions the ecological sciences for continued success and inclusion in the biological sciences curriculum of tomorrow.

Harnessing The 4dee Framework To Redesign An Introductory Ecology Course In A Changing Higher Education Landscape, Nathan Ruhl, Patrick Crumrine, Jennifer Oberle, Courtney Richmond, Shelly Thomas, Sara Wright

College of Science & Mathematics Departmental Research

As higher education undergoes rapid and fundamental change, eco-educators need to be prepared to promote the inclusion of the ecological sciences in the biological sciences curriculum of the future. Here, we present an instructional alignment for an introductory ecology course, which is informed by and integrated with the Four-Dimensional Ecology Education (4DEE) Framework. Our instructional alignment was created collaboratively among faculty involved in teaching the course and emphasizes the relevance and utility of the ecological sciences. We believe that this approach positions the ecological sciences for continued success and inclusion in the biological sciences curriculum of tomorrow.

Helminths Of Thomomys Species (Rodentia: Geomyidae) Of Oregon, Malorri Rene Hughes

Dissertations and Theses

Although often viewed as inconsequential, parasites have significant ecological and evolutionary importance, and studying them can generate knowledge regarding their environments and their hosts. Helminths (intestinal parasites) infecting Western pocket gophers (Thomomys species) in Oregon had been documented based only on morphology prior to this study. Basing parasite identification solely on morphology is problematic because the characteristics used to identify species can be vague or similar, leading to misidentification or obscuring the true biodiversity present. Using molecular markers to verify species present not only is more reliable but also can be informative in terms of the host-parasite association. To …

Performance Determinants Of Unsupervised Clustering Methods For Microbiome Data, Yushu Shi, Liangliang Zhang, Christine B Peterson, Kim-Anh Do, Robert R Jenq

Faculty, Staff and Student Publications

Background: In microbiome data analysis, unsupervised clustering is often used to identify naturally occurring clusters, which can then be assessed for associations with characteristics of interest. In this work, we systematically compared beta diversity and clustering methods commonly used in microbiome analyses. We applied these to four published datasets where highly distinct microbiome profiles could be seen between sample groups, as well a clinical dataset with less clear separation between groups.

Results: Although no single method outperformed the others consistently, we did identify the key scenarios where certain methods can underperform. Specifically, the Bray Curtis (BC) metric resulted in poor …

Charcoal Value Chain As A Complimentary Livelihood Activity For Pastoralists In The Rangelands, S. Teyie, Oliver Vivian Wasonga, C. Bergmann, M. Petersen

IGC Proceedings (1977-2023)

Global charcoal production has more than tripled over the past 50 years from 17.3 million tons in 1964 to 53.1 million tons in 2014. 61% of the present global charcoal production occurs in Africa, mostly to satisfy demand for cooking fuel from urban and peri-urban households. Despite the adverse environmental impacts associated with charcoal production, a significant global population relies on it for energy needs, while many producers depend on it as a livelihood source. Whereas this calls for efforts to promote sustainable charcoal production practices, this has to be informed by in-depth understanding of the charcoal value chain to …

Filling The Gap: Molting Behavior Of Colima Warblers And Research Opportunities For Understudied North American Songbirds, Benjamin Gochanour, Jose L. Alcantara, Paula Cimprich, Jeffrey F. Kelly, Andrea Contina

School of Integrative Biological & Chemical Sciences Faculty Publications

We implemented stable isotope analysis to evaluate the molt behavior of the Colima warbler (Leiothlypis crissalis), an understudied migratory songbird occurring in Mexico and recently discovered breeding in the southern part of Texas, USA. We built a geostatistical model showing variation in deuterium precipitation values (d2Hp) across a latitudinal gradient within the Colima warbler breeding range in northeastern Mexico. Then, based on stable isotope ratios of deuterium in feathers (d2Hf), we assigned wintering Colima warblers captured in Central Mexico to possible molting areas near the southwestern portion of the species' breeding range. To the best of our knowledge, this is …

The Nexus Of Gut Microbiota, Diet, And Health, Sajal Bhattarai, Srinivas Janaswamy

Dairy Science and Food Science Faculty Publications: 2022 to Present

The gut microbiome incorporates the ecological niche specific to the totality of the microorganisms in the human gut. Unique to every individual, the blueprint of the microbiome sets up at birth and functions as a human organ and plays a significant role in digestion, detoxification, fighting pathogens, modulating the immune system, and improving health. The gut microbiota and associated health implications are influenced by factors such as birth and age, diseases, use of antibiotics and food components (e.g., complex carbohydrates and dietary fibers, plant proteins, unsaturated fatty acids, and functional compounds of natural origin such as flavones, flavonoids, polyphenols, and …

College Of Natural Sciences Newsletter, February 2022, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Volume 3, Issue 2

Page 1 Dean's Message
Page 2 Awards & Recognition
Page 3-4 Media Coverage of CNS
Page 5- 6 Local Boy Scouts Earn Their Chemistry Merit Badges
Page 7-8 Mount Vernon Teacher Wins 2022 South Dakota Outstanding Physical Science Teacher Award
Page 9 Middle Schoolers Visit SDSU
Page 10 Microbiology Club Tours POET
Page 11 53rd Geography Convention
Page 12 Open PRAIRIE Data

Drought Imprints On Crops Can Reduce Yield Loss: Nature's Insights For Food Security, Peng Fu, Deepak Jaiswal, Justin M. Mcgrath, Shaowen Wang, Stephen P. Long, Carl J. Bernacchi

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

The Midwestern “Corn-Belt” in the United States is the most productive agricultural region on the planet despite being predominantly rainfed. In this region, global climate change is driving precipitation patterns toward wetter springs and drier mid- to late-summers, a trend that is likely to intensify in the future. The lack of precipitation can lead to crop water limitations that ultimately impact growth and yields. Young plants exposed to water stress will often invest more resources into their root systems, possibly priming the crop for any subsequent mid- or late-season drought. The trend toward wetter springs, however, suggests that opportunities for …

Climate Change Awareness In The United Arab Emirates, Mariam Matar Abdulla Mohammed Almheiri

Theses

Climate change has focused public attention in the United Arab Emirates (UAE) on the role of society in environmental protection. The objective of this study was to determine the level of public awareness of climate change in the seven emirates of the UAE. The study also aimed to determine the spatial and geographical distribution and gender differences, as well as to investigate the possible influence of human activities on climate change impacts. In a cross-sectional survey, the researcher used a questionnaire to collect data from a sample of 4000 participants to answer the research questions. The drop-off pick-up (DOPU) method …