Digital Commons Network^™

The Socioeconomic & Environmental Factors Influencing Prevalence Of Zoonotic Pathogens In Rats: A Meta-Analysis, Katelyn Wing

Honors Theses

Background/Question/Methods

Global rat populations are increasing at an alarming rate across the world. In turn, this increases the risk of human-rat interactions and the potential spread of zoonotic pathogens and parasites. Rats are the second most common host of disease and can have detrimental effects in urban ecosystems. Rattus rattus and R. norvegicus are the two most abundantly distributed species of rats and are the target organism for this study. The aim of this study is to understand the connection between environmental and socioeconomic factors that influence the rate of zoonotic disease in rats. We developed two hypotheses to gain …

Deepening Knowledge Of Nutrient Dynamics In Coastal Waters, Meirinawati Hanny, Wahyudi A'An Johan

ASEAN Journal on Science and Technology for Development

Nutrients are important compounds in waterbodies that regulate primary productivity and phytoplankton growth, the basis of food webs. Increased nutrient concentration has become a serious concern because it causes eutrophication and threatens the sustainability of ecosystems. Eutrophication is the process of nutrient enrichment in water bodies that affects their productivity and decreases water quality. Although information about nutrient distribution, limiting nutrients, and nutrient budgets is important for coastal water management, studies of wide-scale nutrient dynamics in Indonesian waters remain limited. To provide comprehensive data on nutrients, this review summarized the concentrations and compositions of nutrients in coastal waters, compared the …

Grand Design For Merapi Irrigation Channel System Using Watershed And River Region Approaches Based On Community Development In Yogyakarta, Indonesia, Suprayogi Slamet, Gunawan Totok, Murti Sigit Heru, Prihantarto Wikan Jaya, Alatas Masrur

ASEAN Journal on Science and Technology for Development

This paper proposes a grand design for Merapi Irrigation Channel, an irrigation channel system spanning from Turi to Cangkringan District in Yogyakarta, Indonesia. This design is based on Geographic Information System research to assess the feasibility of the system from two aspects, namely geophysics using site selection approaches (watershed and river region) and community aspirations, analyze potential water resource availability to support its sustainability, and construct a grand design. Primary data acquired from IKONOS image interpretation were used to collect geophysical and ?eld data for parameter mapping, and spatial data were modeled using Geographic Information System technology to determine paths, …

2021-2022 Program And Abstracts: Celebration Of Student Scholarship, Morehead State University. Undergraduate Research Fellowship Program.

2022 Celebration of Student Scholarship - Poster Presentations

The 2021-2022 Program and Abstracts for the Celebration of Student Scholarship at Morehead State University held on April 27, 2022. A Showcase of Student Research, Scholarship, Creative Work, and Performance Arts.

Fighting Food Insecurity In New York City: What Role For Street Trees?, Kristen Cooney

Environment and Sustainability Honors Papers

There is growing recognition that urban forests have the potential to combat food insecurity via their edible parts, namely fruits, berries, and nuts. I researched New York City’s street trees, by locating trees with edible parts within food insecure communities, to analyze this potential.

P-Flux: A Phosphorus Budget Dataset Spanning Diverse Agricultural Production Systems In The United States And Canada, M. R. Williams, P. Welikhe, J. Bos, K. King, M. Akland, D. J. Augustine, C. Baffaut, E. G. Beck, A. Bierer, D. D. Bosch, Elizabeth H. Boughton, C. B. Brandani, E. Brooks, Anthony R. Buda, M. Cavigelli, J. Faulkner, G. Feyereisen, A. Fortunato, B. Lee, Jason M. Unrine

Plant and Soil Sciences Faculty Publications

No abstract provided.

Effects Of Seasonal Variation Of Abiotic Factors On Edna Detection Of Two Groundwater Crayfish Species, Jared Prine Higgs

Honors Capstone Projects and Theses

No abstract provided.

Exploring Interactions Between Arkansas Urban Producers: Social Networks And Modes Of Information Seeking, Catherine E. Sanders, Don W. Edgar, Casandra K. Cox, Leslie D. Edgar

Journal of Human Sciences and Extension

The purpose of this study was to explore the social networks and interactions between urban producers in Arkansas through a social network analysis. Using a mixed-methods approach, the current study collected data about participants’ social network interactions and methods of seeking information for urban farming. Results indicated how and where participants preferred to obtain information, peer-to-peer interactions within the network, and key players or opinion leaders in the network. The methods used in the current study may serve as an example of social network articulation for populations without a formal network to assist with outreach to communities potentially underserved by …

Full Issue, Volume 10, Number 2, Julie Fox, Donna J. Peterson, Scott Cummings

Journal of Human Sciences and Extension

No abstract provided.

2022- The Twenty-Sixth Annual Symposium Of Student Scholars

Symposium of Student Scholars Program Books

The full program book from the Twenty-sixth Annual Symposium of Student Scholars, held on April 19, 2022. Includes abstracts from the presentations and posters.

In The Face Of Climate Change, Does Human Trampling Affect Dune Resilience And Alter Ecosystem Services?, Alexandra O. Findlay

Honors College Theses

Sand dunes play a valuable role on the coastline supporting unique native species and protecting beach communities. The City of Tybee Island, Georgia, USA has undergone extensive dune restoration to expand and rehabilitate its shoreline to better defend the town against the increasing frequency of hurricanes and storm surge. The project included the recovery of existing dune structures and construction of new dunes filled with sand pumped from offshore and vegetated with a variety of native species. To analyze the impact of human trampling on dune vegetation occurring adjacent to footpaths and crossovers in new and established dunes, we measured …

Two Fingerprinting Sets For Humulus Lupulus Based On Kasp And Microsatellite Markers, Mandie Driskill, Katie Pardee, Kim E. Hummer, Jason D. Zurni, Keenan L. Amundsen, Annette Wiles, Claudia Wiedowi, Josef Patza, John A. Henningi, Nahla V. Bassili

Department of Agronomy and Horticulture: Faculty Publications

Verification of clonal identity of hop (Humulus lupulus L.) cultivars within breeding programs and germplasm collections is vital to conserving genetic resources. Accurate and economic DNA-based tools are needed in dioecious hop to confirm identity and parentage, neither of which can be reliably determined from morphological observations. In this study, we developed two fingerprinting sets for hop: a 9-SSR fingerprinting set containing high-core repeats that can be run in a single PCR reaction and a kompetitive allele specific PCR (KASP) assay of 25 single nucleotide polymorphisms (SNPs). The SSR set contains a sex-linked primer pair, HI-AGA7, that was used …

The Presence Of Ehrlichia In White-Tailed Deer In Central Virginia, Brenna Kurtz

Liberty University Research Week

Undergraduate

Theoretical Proposal

Something Fishy In Seafood Trade?, Kathy Baylis, Lia Nogueira, Linlin Fan, Kathryn Pace

Cornhusker Economics

The safety of food imports continues to be in the spotlight. Globally, each year, contaminated food causes almost 1 in 10 people to fall ill and 420 thousand people to die (WHO, 2017). Protecting consumers from unsafe foods is complicated by the increased role of international trade in our food system. The U.S. Centers for Disease Control and Prevention found that disease outbreaks associated with imported food increased from 1996 to 2014, with fish and produce being the main culprits (Gould et al., 2017). For example, in 2019, two separate cases of tuna from Vietnam were found to have sickened …

Adaptive Coping For Covid-Related Stress, Sandra Maloy

Undergraduate Research Conference

The restrictions placed on society by the COVID- 19 pandemic for the purpose of limiting spread of the disease appear to have produced a different set of potential chronic health issues. Through lockdown and social distancing measures the general public lost access to key elements of daily life. The literature and qualitative interview data primarily support a negative association between participation in spiritual and physical activity and COVID-19 related stress. These findings are not surprising based on previous research investigating coping and other chronic stressors.

A Diverse Flea (Shiponaptera) Assemblage From The Small Mammals Of Central New Mexico, Dianne Esther Peterson

Biology ETDs

The geographical ranges of many mammals and their associated parasites are dynamic. Comprehensive documentation of these communities over time provides a foundation for interpreting how changing environmental conditions, driven by accelerating climate change, other anthropogenic disturbances, and natural events may influence host-parasite interactions. Fleas (Order Siphonaptera) are obligate, hematophagous parasites of birds and mammals with medical interest due to their role in transmitting pathogens. From 2016 to 2019, we sampled the small mammal and associated flea communities in El Malpais National Conservation Area (El Malpais) in Cibola County, New Mexico. Among 898 mammalian specimens, 925 fleas representing 29 species were …

Comparative Sequence Analysis Elucidates The Evolutionary Patterns Of Yersinia Pestis In New Mexico Over Thirty-Two Years, M. Elizabeth Warren

Theses and Dissertations

Yersinia pestis, a gram-negative bacterium, is the causative agent of plague. Y. pestis is a zoonotic pathogen that occasionally infects humans, and is endemic in the western United States. History gives evidence of three main plague pandemics. The first, originating in Egypt in 541AD, is known as the Justinian plague. The second, perhaps most well-known, is thought to have emerged in 1347AD in China, and is called the Black Death. The third, and current plague pandemic, also emerged in China in 1855. In 1899, Y. pestis was established in California, and the plague in other parts of America evolved from …

Characterisation Of Drug-Resistant Mycobacterium Tuberculosis Mutations And Transmission In Pakistan, Gary Napier, Anwar Sheed Khan, Abdul Jabbar, Muhammad Tahir Khan, Sajid Ali, Muhammad Qasim, Noor Mohammad, Rumina Hasan, Zahra Hasan, Susana Campino

Department of Pathology and Laboratory Medicine

Tuberculosis, caused by Mycobacterium tuberculosis, is a high-burden disease in Pakistan, with multi-drug (MDR) and extensive-drug (XDR) resistance, complicating infection control. Whole genome sequencing (WGS) of M. tuberculosis is being used to infer lineages (strain-types), drug resistance mutations, and transmission patterns-all informing infection control and clinical decision making. Here we analyse WGS data on 535 M. tuberculosis isolates sourced across Pakistan between years 2003 and 2020, to understand the circulating strain-types and mutations related to 12 anti-TB drugs, as well as identify transmission clusters. Most isolates belonged to lineage 3 (n = 397; 74.2%) strain-types, and were MDR (n = …

Ecosystem Service Values Of Gardens In The Yellow River Basin, China, Ge Qianqian, Xu Wenjie, Fu Meichen, Han Yingxin, An Guoqiang, Xu Yuetong

Journal of Arid Land

Studies on the ecosystem service value (ESV) of gardens are critical for informing evidence- based land management practices based on an understanding of the local ecosystem. By analyzing equivalent value factors (EVFs), this paper evaluated the values of 11 ecosystem services of gardens in the Yellow River Basin of China in 2019. High-precision land use survey data were used to improve the accuracy of the land use classification, garden areas, and spatial distribution of the ESVs of gardens. The results showed that garden ecosystem generally had high ESVs, especially in terms of the ESV of food production, which is worthy …

Host-Pathogen Coevolution Between Tasmanian Devils (Sarcophilus Harrisii) And Devil Facial Tumor Disease, Dylan Garret Gallinson

USF Tampa Graduate Theses and Dissertations

Coevolution is a driving force of rapid evolution, yet the complexity of coevolutionary interactions has made it difficult to characterize the genomic basis of traits mediating such relationships. Coevolutionary dynamics are especially important in host-pathogen systems where the host and pathogen must constantly adapt to one another. The Tasmanian devil and its species-specific transmissible cancer, devil facial tumor disease (DFTD), provide the rare opportunity to study host-pathogen coevolution in a complex natural system. Extensive spatiotemporal devil sampling, high linkage disequilibrium in devils, and a large selective pressure imposed by DFTD facilitate a system tractable for study. Here, we characterized devil …

Fungi In A Warmer World: Fungal Diversity In The Tropical Miocene Climate Optimum Of The Clarkia Region Of Idaho, Usa, J. Fairchild, L. Lennex-Stone, T. Horsfall, L. Tarlton, S. Jones, A. Caldwell, O. Vanderespt, L. Smallwood, A. Patel, J. O'Keefe, I. Romero, N. Nunnez Otano, M. Pound

2022 Celebration of Student Scholarship - Poster Presentations

A knowledge gap associated with how fungal communities change in response to climate was identified in the 2018 State of the World Fungi report (Willis, 2018). While it is virtually impossible to test in the present, fungal assemblage changes can be studied in sediments from a warmer-than-present period such as the Miocene Climate Optimum (MCO) (Romero et al. 2021; O’Keefe 2017). The Fungi in a Warmer World project aims to generate and analyze a global-scale data set of fungal biodiversity, ecology, and associated flora from MCO sediments. This dataset will be used to model past fungal assemblage changes across the …

Survey Of Spiders Within Eastern Kentucky, Mercy Hailu, Bailey Bullock, Joshua Hicks, Eliana Eldridge, Sean O'Keefe

2022 Celebration of Student Scholarship - Poster Presentations

Biodiversity is known to be the variation of living organisms compromising several levels, beginning from genes, then species, communities, then finally ecosystems. Biodiversity is crucial in maintaining ecological balance, boosting ecosystem productivity, and determining the quality of ecosystem services such as pest management in agriculture. Being aware of biodiversity's importance can also help with the prevention of continuous threats to biodiversity and be best prepared to manage conservation challenges. Typically, mammals, birds, and plants are used to assess biodiversity. However, spiders may be effective in indicating environmental change because they are taxonomically quite diverse, species fill a variety of ecological …

Fungi In A Warmer World: Middle Miocene Fungal Assemblages And Diversity From Alum Bluff, Florida, Savannah Jones, Taylor Horsfall, Laikin Tarlton, Abigayle Caldwell, Liberty Smallwood, Jolene Fairchild, Libby Lennex-Stone, Alyssa Patel, Olivia Vanderespt, Ingrid Romero, Jennifer O'Keefe, Noelia Nunez Otano, Sophie Warny, Matthew Pound

2022 Celebration of Student Scholarship - Poster Presentations

Fungi play a key role in the terrestrial carbon cycle, soil formation, and overall plant growth as terrestrial decomposers (1, 2). Thus, the study of fungi, especially in the fossil record, is critical to understanding how fungal assemblages will react to future warming events. Fossil fungi provide a large-scale, long-term dataset unavailable from modern records, allowing for the generation of viable paleoclimate reconstructions and predictions (3, 4). Despite their importance and advantages in forming ecological and climatological interpretations, deep-time fungi have been underutilized (3). The Fungi in a Warmer World (FiaWW) project aims to deliver the first global view of …

Making Forests, Making Communities: An Ethnography Of Reforestation In Monteverde, Costa Rica, Megan Brown

Anthropology Theses and Dissertations

Reforestation is not just planting trees in the ground. More than net increase in forest cover, reforestation is a complex political endeavor undertaken by both humans and non-humans and a popular climate change mitigation tactic. However, little research has examined the dynamics between selection of specific reforestation strategies, health, and community resilience, particularly with attention to entanglements between the lives of both human and non-human forest dwellers. This ethnographic work, based on six months of in-person fieldwork and six months of digital ethnography, examines reforestation and forest relations in Costa Rica’s Monte Verde zone, a region which experienced widespread deforestation, …

Smokejumper Magazine, April 2022, National Smokejumper Association

Smokejumper and Static Line Magazines

This issue of the National Smokejumper Association (NSA) Smokejumper Magazine contains the following articles: Message from the President; Standing Tall-Making a Difference: Merv George, Supervisor Rogue River-Siskiyou National Forest; Oakus of the Doakus on the Gobi; Odds and Ends; The Homecoming; Recording Smokejumper History; 1944 Rookies-The Civilian Public Service Years; NSA's Most Successful Membership Drive; Sounding Off from the Editor; That First Season-An Almost Love Affair; Siskiyou Rappellers-A Force That Does the Job; Ring of Fire; The Silent Mountain; Gates of the Arctic National Park-Alaska; The Jump List; Travel Air NC8182 Is Flying Again; Pick Your Own Tree; Touching All …

Summer Food Habits Of Myotis Leibii In The Central Appalachians Ecoregion And Comparison To Similar Studies, John O. Whitaker Jr., Virgil Brack Jr., James D. Kiser Jr.

Virginia Journal of Science

Food habits of Myotis leibii, Eastern Small-footed Myotis, were studied during summer in the Central Appalachians Ecoregion. Moths were 70.0% of the diet by volume and were in 97.7% of samples (percent frequency). Beetles, flies, and spiders comprised much of the remaining diet. Percent volume and percent frequency metrics produce similar results. These data and past studies indicate this bat eats a relatively low-diversity diet centered on terrestrial-based arthropod prey across a broad geographical area, irrespective of season, sex, or age. The presence of spiders in the diet may indicate gleaning.

Fragile Foal Syndrome: Its Past, Present, And Future, Alena Martin, Alena M. Martin

Honors College Theses

Though Fragile Foal Syndrome (FFS) has been around for some time, the public interest in FFS is recent. The hype spread rapidly from a public media announcement that a stallion at a prominent North American stud farm was a carrier (Brooks, 2021). As with most genetic mutations, FFS likely arose due to the increased inbreeding that results from human selection (Orlando & Librado, 2019). Fragile Foal Syndrome affects the enzyme responsible for developing the connective tissues. Two recent case studies highlighted the devastating effect of FFS on every part of the equine body (Metzger, et al., 2020; Grillos, 2021). So …

Recently Evolved Francisella-Like Endosymbiont Outcompetes An Ancient And Evolutionarily Associated Coxiella-Like Endosymbiont In The Lone Star Tick (Amblyomma Americanum) Linked To The Alpha-Gal Syndrome, Deepak Kumar, Surendra Raj Sharma, Abdulsalam Adegoke, Ashley Kennedy, Holly C. Tuten, Andrew Y. Li, Shahid Karim

Faculty Publications

Background: Ticks are hematophagous arthropods that transmit various bacterial, viral, and protozoan pathogens of public health significance. The lone star tick (Amblyomma americanum) is an aggressive human-biting tick that transmits bacterial and viral pathogens, and its bites are suspected of eliciting the alpha-gal syndrome, a newly emerged delayed hypersensitivity following consumption of red meat in the United States. While ongoing studies have attempted to investigate the contribution of different tick-inherent factors to the induction of alpha-gal syndrome, an otherwise understudied aspect is the contribution of the tick microbiome and specifically obligate endosymbionts to the establishment of the alpha-gal …

College Of Natural Sciences Newsletter, March & April 2022, College Of Natural Sciences

College of Natural Sciences Newsletters and Reports

Volume 3, Issue 3

Page 1 Dean's Message
Page 2-3 Awards and Recognition
Page 4 2022 URSCAD - CNS Snaps
Page 5 Geography Convention Recap
Page 6 Attention Students!
Page 7-8 Media Coverage of CNS
Page 9 Spring Break Outreach, Adopt the Pantry,
Page 10 Discovery on Tap Event
Page 11 CNS Students Visit State Capital
Page 12 Celebrating 50 Years of Sally
Page 13 Open PRAIRIE Data
Page 14 Grants Awarded and Bio-Micro Day of Scholars
Page 15 -17 2022 Geography Convention Snaps
Page 18 Sally Krueger's 50th Work Anniversary

Using Deep Learning And Uav Imagery To Detect Elkhorn Coral In St. Croix’S East End Marine Park, Samuel Wyatt

Master's Theses

Elkhorn coral, or Acropora palmata, is an important reef building species that promotes species abundance and other ecological services to the communities in the US Virgin Islands. We captured high resolution imagery of a reef in St. Croix’s East End Marine Park using a Wingtra One UAV. We then used deep learning techniques to detect individual coral colonies. We compared two deep learning models, FasterRCNN and MaskRCNN, and found that the models achieved accuracy shores up to 0.78. These scores improved when examining only larger corals in shallow waters. The model was able to both detect Elkhorn coral and …