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Habitat Utilization By Bottlenose Dolphins (Tursiops Truncatus) In Biscayne Bay, Florida, Christine A. Hudak

HCNSO Student Theses and Dissertations

Bottlenose dolphins (Tursiops truncatus) exhibit variable distribution patterns, depending upon their geographic location. Habitat utilization patterns in Biscayne Bay, Florida, were examined using the Biscayne Bay Bottlenose Dolphin Photo-ID database obtained from the National Oceanic and Atmospheric Administration (NOAA) Southeast Fisheries Science Center (SEFSC) Miami Laboratory. Habitat coverages in Biscayne Bay were obtained from the Atlas of Marine Resources Version 1.3B CD and the Biscayne Bay National Park CD. Dolphin sightings were overlaid on the habitat coverages using GIS Arcview software.

The effects of habitat, season, behavior, zone (sectioned area of Biscayne Bay), and depth on patterns …

Wild Horses And Burros In The United States, Allen T. Rutberg

State of the Animals 2003

Treatment of wild horses and burros has improved remarkably over the last fifty years. In the mid-twentieth century, free-ranging horses and burros suffered horribly at the hands of “mustangers” who captured them at will and whim, sometimes using the most brutal of techniques, including aerial pursuit and shooting or crippling key herd members. The horses were packed into livestock trucks hurt, bleeding, and exhausted, and shipped to slaughter without stopping for rest or watering (Ryden 1999). Unprotected by law, only the good will of a few ranchers protected these abused animals. Public awareness of the plight of the wild horses …

Spatial Heterogeneity Of Soil Nutrients, Nitrogen Dynamics, And Vegetation In A 3rd Order Stream Floodplain In Southwestern West Virginia, David Allen Dick

Theses, Dissertations and Capstones

Soil processes often exhibit spatial heterogeneity within ecosystems and this heterogeneity may influence community structure. This study was conducted to determine spatial patterns and variability of soil nutrients and plant communities within different vegetation types in a stream floodplain in southwestern West Virginia. One 5-m × 5-m site was established in each of three vegetation/drainage types: pasture (PA), old field (OF), and wetland scar (SC). Pasture and SC sites were located ~25 m apart on flat bottomland; the OF site was located on a moderate slope 6.3 m above bottomland, ~200 m from PA and SC. A 10-m × 1-m …

Developing Methods For The Rapid Molecular Assessment Of Aquatic Microbial Communities, Traci D. Hudson

Theses, Dissertations and Capstones

Molecular investigations of microbial community structure and dynamics involve costly and time-consuming methods. This approach is limiting when rapid assessment and detection of microbial organisms are needed. In aquatic environments, especially freshwater environments which may be used as a water source, rapid detection of pathogenic microbes is essential. Likewise, monitoring for the presence or absence of various functional genes can be used to indicate the type of microbial community present in the environment of interest. Therefore, the aim of this study was to develop and optimize methods necessary for the rapid assessment of freshwater microbial community structure and dynamics. Primers …

Megapode Newsletter 17(1)-21(2) (2003-2008), World Pheasant Association, Birdlife International, Ssc Megapode Specialist Group

Galliformes Specialist Group and Affiliated Societies: Newsletters

Volume 17, Number 1 (April 2003)

Editors: René W. R. J. Dekker and Darryl N. Jones

Viable population of Bruijn's Brush-turkey Aepypodius bruijnii discovered, Iwein Mauro

A new, a forgotten and a lost specimen of Bruijn's Brush-turkey Aepypodius bruijnii, C. W. Moeliker, C. J. Heij, J. N. J. Post, and E. J. O. Kompanje

Successful synanthropy in an Australian megapode, Darryl N. Jones

Monitoring the Nicobar megapode Megapodius nicobariensis: Phase I, Current status and conservation of the Nicobar megapode Megapodius nicobariensis, K. Sivakumar

Megapode Genetics Project proposal, Gillian C. Baker

Polynesian megapode Megapodius pritchardii status survey on …

A Key To The Eggs And Nests Of Iowa Turtles, James L. Christiansen, Jeffrey R. Parmelee

Journal of the Iowa Academy of Science: JIAS

Biologists often need to identify destroyed turtle nests where a predator has excavated and eaten the eggs. We present a dichotomous key to the eggs and nests of Iowa's turtles based on egg or nest morphology and known range of the species. Egg and nest morphology clearly separated most nests of the families Chelydridae and Kinosternidae and many of the Emydidae. However, egg morphology must be combined with known range to distinguish wood turtles (Glyptemys insculpta) from other emydids. These factors will also separate most false map turtles (Graptemys pseudogeographica) from other species. Similarities among egg morphologies, nest morphologies, and …

An Ecological Study Of The Spotted Salamander, Ambystoma Maculatum, And Jefferson Salamander, A. Jeffersonianum, In West Virginia, Seth J. Myers

Theses, Dissertations and Capstones

The movements of Spotted Salamanders, Ambystoma maculatum, and Jefferson Salamanders, A. jeffersonianum, in and out of an ephemeral wetland in West Virginia were monitored for one breeding season using a drift fence lined with funnel traps. Significant movements of A. jeffersonianum coincided with rainfall and maximum daily air temperatures reaching a minimum of 5° C. Significant movements of A. maculatum coincided with rainfall and maximum daily air temperatures of at least 10° C. A. jeffersonianum preceded A. maculatum to the breeding site. Males of both species preceded females. The mark-recapture estimate of A. maculatum is 67 males and 25 females. …

Dragonflies (Odonata) Of The Ouachita National Forest, George L. Harp, Phoebe A. Harp

Journal of the Arkansas Academy of Science

The Ouachita National Forest (ONF) was established in 1907 and encompasses 1.8 million acres (728,450 ha) in Arkansas and Oklahoma, almost entirely within the Ouachita Mountains Natural Division. The adult dragonfly species richness, seasonal and spatial distribution, and relative abundance were surveyed during 2002. Fifty-four collections were made at 43 sites during 10-19 May (20 collections), 10-22 July (19 collections) and 9-17 September (15 collections). Literature records were searched, as well as records from pertinent museums and individuals. Eighty-three species are reported here for the ONF, 77 of which were collected during 2002. Nehallenia integricollis newly reported for Arkansas, as …

Fungal Biology And Agriculture: Revisiting The Field, O. Yarden, D. J. Ebbole, S. Freeman, R. J. Rodriguez, M. B. Dickman

Department of Plant Pathology: Faculty Publications

Plant pathology has made significant progress over the years, a process that involved overcoming a variety of conceptual and technological hurdles. Descriptive mycology and the advent of chemical plant-disease management have been followed by biochemical and physiological studies of fungi and their hosts. The later establishment of biochemical genetics along with the introduction of DNA-mediated transformation have set the stage for dissection of gene function and advances in our understanding of fungal cell biology and plant–fungus interactions. Currently, with the advent of high-throughput technologies, we have the capacity to acquire vast data sets that have direct relevance to the numerous …

Impact Of Fire Management On The Ecology Of Collared Lizard (Crotaphytus Collaris) Populations Living On The Ozark Plateau, Jennifer A. Brisson, Jared L. Strasburg, Alan R. Templeton

School of Biological Sciences: Faculty Publications

Eastern collared lizards (Crotaphytus collaris collaris) on the Ozark Plateau of southern Missouri are restricted to islands of rocky glade habitat located throughout the oak–hickory forests of the region. Human mediated suppression of fire negatively impacts collared lizard populations by permitting the overgrowth and consequent disappearance of this glade habitat and also leads to a dense forest understorey that impedes movement of lizards between glades. We present data examining the effects of a fire management regime on collared lizard populations we monitored via mark/recapture from 1998 to 2001. We demonstrate increased glade-to-glade dispersal, colonization of previously unoccupied glades, …

Invasiveness Of Some Biological Control Insects And Adequacy Of Their Ecological Risk Assessment And Regulation, Svata M. Louda, Amy E. Arnett, Tatyana A. Rand, F. L. Russell

School of Biological Sciences: Faculty Publications

The problem of invasive species has reignited interest in biological control as a management tool. Classical biological control involves deliberate release of exotic natural enemies into new environments in an attempt to limit the density of an invasive species. Persistent, sustained limitation of invasive species by coevolved natural enemies is a seductive concept. Evidence now suggests, however, that biological control through the release of natural enemies can carry unanticipated ecological risks. There have been ecological side effects of distributing a deliberately introduced weevil (Rhinocyllus conicus) and an adventitious weevil (Larinus planus) for the biological control of …

Improving Precision And Reducing Bias In Biological Surveys: Estimating False-Negative Error Rates, Andrew J. Tyre, Brigitte Tenhumberg, Scott A. Field, Darren Niejalke, Kirsten Parris, Hugh P. Possingham

School of Biological Sciences: Faculty Publications

The use of presence/absence data in wildlife management and biological surveys is widespread. There is a growing interest in quantifying the sources of error associated with these data. We show that false-negative errors (failure to record a species when in fact it is present) can have a significant impact on statistical estimation of habitat models using simulated data. Then we introduce an extension of logistic modeling, the zero-inflated binomial (ZIB) model that permits the estimation of the rate of false-negative errors and the correction of estimates of the probability of occurrence for false-negative errors by using repeated visits to the …

Connectivity Between Coastal Habitats Of Two Oceanic Caribbean Islands As Inferred From Ontogenetic Shifts By Coral Reef Fishes, I. Nagelkerken, G. Van Der Velde

Gulf and Caribbean Research

Mangroves and seagrass beds are considered important nursery habitats for juveniles of coral reef fishes. Studies have mostly focused on the fish community of just one habitat, so the connectivity between different coastal habitats is often unclear. In this study, density and size of reef fish were determined using a single sampling technique in four non-estuarine bay habitats and four reef zones in Curaçao and Bonaire (Netherlands Antilles). The data indicate that of the complete reef fish community at least 21 species show ontogenetic crossshelf shifts in habitat utilization. The 21 species mainly utilized shallow-water habitats (mangroves, seagrass beds, channel …

Spatial And Temporal Heterogeneity Of Anopheles Mosquitoes And Plasmodium Falciparum Transmission Along The Kenyan Coast, Charles M. Mbogo, Joseph M. Mwangangi, Joseph G. Nzovu, Weidong Gu, Guiyan Yan, James T. Gunter, Chris Swalm, Joseph Keating, James L. Regens, Josephat I. Shililu, John I. Githure, John C. Beier

All Peer-Reviewed Publications

The seasonal dynamics and spatial distributions of Anopheles mosquitoes and Plasmodium falciparum parasites were studied for one year at 30 villages in Malindi, Kilifi, and Kwale Districts along the coast of Kenya. Anopheline mosquitoes were sampled inside houses at each site once every two months and malaria parasite prevalence in local school children was determined at the end of the entomologic survey. A total of 5,476 Anopheles gambiae s.l. and 3,461 An. funestus were collected. Species in the An. gambiae complex, identified by a polymerase chain reaction, included 81.9% An. gambiae s.s., 12.8% An. arabiensis, and 5.3% An. merus. Anopheles …

Malariasphere: A Greenhouse-Enclosed Simulation Of A Natural Anophelesgambiae (Diptera: Culicidae) Ecosystem In Western Kenya, Bart G.J. Knols, Basilio N. Njiru, Evan M. Mathenge, Wolfgang R. Mukabana, John C. Beier, Gerry F. Killeen

All Peer-Reviewed Publications

Background: The development and implementation of innovative vector control strategies for malaria control in Africa requires in-depth ecological studies in contained semi-field environments. This particularly applies to the development and release of genetically-engineered vectors that are refractory to Plasmodium infection. Here we describe a modified greenhouse, designed to simulate a natural Anopheles gambiae Giles ecosystem, and the first successful trials to complete the life-cycle of this mosquito vector therein. Methods: We constructed a local house, planted crops and created breeding sites to simulate the natural ecosystem of this vector in a screen-walled greenhouse, exposed to ambient climate conditions, in western …

Incentives Toward Conservation Of Argaii Ovis Ammon: A Case Study Of Trophy Hunting In Western China, R. B. Harris, Dan H. Pletscher

Wildlife Biology Faculty Publications

We investigated management of wildlife, habitat and the hunting programme in Aksai County, Gansu Province, People's Republic of China, during 1997-2000. Argali Ovis amnion is the focal species both for conservation and hunting. The hunting programme is intended to produce incentives to conserve wildlife and habitat. Poaching, a serious concern throughout western China, has been reduced in recent years in Aksai. Wildlife population trends are unknown because standardized surveys were begun only in 2000. Threats to argali in Aksai include livestock grazing, placer gold mining, and development of a dam, reservoir and aqueduct. The number of hunters participating in the …

Red Rock Desert Learning Center & Wild Horse And Burro Facility: Oliver Ranch Feasibility Study, Yosemite National Institutes

Oliver Ranch Project

Yosemite National Institutes, a private, non-profit national environmental education leader, has been running successful residential science programs in national parks for 30 years in partnership with the National Park Service. The mission of YNI is to provide educational adventures in nature's classroom to inspire a personal connection to the natural world and responsible actions to sustain it. Early in 2000 in Las Vegas, a new organization, the Outside Las Vegas Foundation (OLVF), was forming. The OLVF is dedicated to preserving the federal public lands surrounding Las Vegas, enriching the experience of its visitors, enhancing the quality of life for local …

Reseeding Of Grazing Gastropods And Bivalves Into The Marine Environment In Western Australia, Jane Borg

Fisheries Management Papers

The Department of Fisheries does not want to embark on what is ‘new territory’ in Western Australia without a policy framework to define what is to happen, why it is to happen, and what will happen if the project does or does not succeed. This paper therefore attempts to do three things. 1. It sets in place accepted definitions of reseeding and stock enhancement within the general context of fisheries management in Western Australia. 2. It discusses the policy issues associated with reseeding grazing gastropods and bivalves into the natural environment. 3. It proposes a framework or process to be …

Fisheries Occasional Publication No. 2 - Scientific Workshop On The Margaret River Marron, Brett Molony

Fisheries Occasional Publications

Purpose of the Workshop

To gather together and review the scientific evidence around genetic and sustainability issues necessary for the management of Margaret River Marron (MRM)

The outcomes of the day will be to provide scientific advice, options and priorities to the relevant Programs within the Department of Fisheries to promote the sustainability of marron within MR.

* Introduction to, and comparison of, genetic techniques available to researchers. Presenter - Phil Vercoe

* What do we know about the genetic diversity of marron and other Cherax? Presenter - Chris Austin

* Morphology and Hybrids Presenter - Craig Lawrence

* The …

A Vascular Flora Of Choccolocco Creek: Calhoun, Cleburne, And Talladega Counties, Alabama, Loretta Richardson Weninegar

Theses

A study of the vascular flora of the wetland species of Choccolocco Creek, its floodplain, and other sensitive areas within the Choccolocco Creek watershed was conducted from March 1994 to May 2002. The creek, which originates in the Talladega National Forest in Cleburne County, is located in northeast Alabama. It flows in a south/southwest direction along the eastern border of Calhoun County and across northern Talladega County to its confluence with Logan Martin Lake near Talladega, Alabama. The floodplain occupies 6,514.67 hectares of the watershed that consists of 97,128 hectares of land in the three county study area.

The bulk …

Parallel Characterization Of Anaerobic Toluene-And Ethylbenzene-Degrading Microbial Consortia By Pcr-Denaturing Gradient Gel Electrophoresis, Rna-Dna Membrane Hybridization, And Dna Microarray Technology, Yoshikazu Koizumi, John J. Kelly, Tatsunori Nakagawa, Hidetoshi Urakawa, Said El Fantroussi, Saleh Al-Muzaini, Manubu Fukui, Yoshikuni Urushigawa, David A. Stahl

Biology: Faculty Publications and Other Works

A mesophilic toluene-degrading consortium (TDC) and an ethylbenzene-degrading consortium (EDC) were established under sulfate-reducing conditions. These consortia were first characterized by denaturing gradient gel electrophoresis (DGGE) fingerprinting of PCR-amplified 16S rRNA gene fragments, followed by sequencing. The sequences of the major bands (T-1 and E-2) belonging to TDC and EDC, respectively, were affiliated with the family Desulfobacteriaceae. Another major band from EDC (E-1) was related to an uncultured non-sulfate-reducing soil bacterium. Oligonucleotide probes specific for the 16S rRNAs of target organisms corresponding to T-1, E-1, and E-2 were designed, and hybridization conditions were optimized for two analytical formats, membrane and …

Fine Root Vitality And Its Application In A Minirhizotron Study Of A Co2 Enrichment In A Florida Scrub Oak Ecosystem, Brandon Todd Herbert

Biological Sciences Theses & Dissertations

Minirhizotron images are assigned color codes to approximate the age of individual roots in situ. Triphenyl-tetrazolium chloride (TTC) has been used to measure the vitality of plant tissue by detecting dehydrogenase activity. TTC was used to assess the vitality of root tissue by color in a scrub oak ecosystem at Kennedy Space Center in central Florida. Roots were excavated, sorted into four color classes and stained with TTC. The product of the reduction of TTC by dehydrogenase enzyme, formazan, was extracted and its absorbance recorded using a spectrophotometer. A significant difference (p2 enrichment being conducted on a scrub oak …

The Future Of Stock Enhancements: Lessons For Hatchery Practice From Conservation Biology, Culum Brown, Rachel L. Day

Aquaculture Collection

The world’s fish species are under threat from habitat degradation and over-exploitation. In many instances, attempts to bolster stocks have been made by rearing fish in hatcheries and releasing them into the wild. Fisheries restocking programmes have primarily headed these attempts. However, a substantial number of endangered species recovery programmes also rely on the release of hatchery-reared individuals to ensure long-term population viability. Fisheries scientists have known about the behavioural deficits displayed by hatchery-reared fish and the resultant poor survival rates in the wild for over a century. Whilst there remain considerable gaps in our knowledge about the exact causes …

Biological Synopsis Of The Black Bream, Acanthopagrus Butcheri (Munro) (Teleostei: Sparidae) In Western Australia With Reference To Information From Other Southern States, Jeffrey V. Norriss, J E. Tregonning, Rod C J Lenanton, Gavin A. Sarre

Fisheries Research Reports

This synopsis presents a review of the literature and research to April 2001on the biology of black bream, Acanthopagrus butcheri (Sparidae), particularly in relation to Western Australian populations. A. butcheri is a commercially and recreationally important species, and is endemic to the coastal lakes, estuaries, river systems and sheltered coastal waters of southern Australia, including Tasmania. Separate stocks reside within each river/estuarine system in southwestern Australia, and there is considerable variation in feeding, growth rates and age at maturity among stocks. For rivers/estuaries that are seasonally flushed in winter, downstream movement with the flush is followed by the annual upstream …

The Ecology Of Lianas And Their Role In Forests, Stefan A. Schnitzer, Frans Bongers

Biological Sciences Faculty Research and Publications

Recent studies have demonstrated the increasingly important role of lianas (woody vines) in forest regeneration, species diversity and ecosystem-level processes, particularly in the tropics. Mechanisms responsible for the maintenance of liana species diversity could yield new insights into the maintenance of overall species diversity. Lianas contribute to forest regeneration and competition, not only by competing directly with trees, but also by differentially affecting tree species and thus changing how trees compete among themselves. In addition, they contribute considerably to ecosystem-level processes, such as whole-forest transpiration and carbon sequestration. As the rate of tropical forest disturbance increases, they are likely to …

Coyote Foraging Ecology, Vigilance, And Behavioral Cascades In Response To Gray Wolf Reintroduction In Yellowstone National Park, T. Adam Switalski

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Vigilance behavior can aid in the detection of predators and may also play a role in observation of conspecifics, in food acquisition, and in the prevention of kleptoparasitism. However, in most occasions, vigilance is most important as an antipredator function. Generally, factors that increase the risk of predation also increase the amount of vigilance. We examined whether the reintroduction of the large predator, the wolf, in Yellowstone National Park (YNP) would influence coyote vigilance and foraging ecology. From December 1997 to July 2000, we collected 1743 h of coyote activity budgets. Coyote home ranges occurred within wolf territories (termed high-use …

Statmod: A Tool For Interfacing Arcview® Gis With Statistical Software To Facilitate Predictive Ecological Modeling, Christine M. Garrard

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

As geographical information systems and spatial data become more accessible, predictive spatial modeling in ecology is becoming more common. Unfortunately, not all ecologists possess the necessary skills to successfully combine statistical models and geographical information systems. In response to this problem, I wrote an extension for ArcView^® GIS called StatMod. This extension interfaces ArcView GIS with SAS^® and S-PLUS^® statistical software and walks the user through creating and mapping logistic regression and classification and regression tree models.

StatMod was then used to run a series of analyses that would have been difficult without such a tool. A …

Anting Behavior In Birds: Ant Selection And Effect Of Ant Chemistry On Feather Ectoparasites, Hannah Carrington Revis

Biological Sciences Theses & Dissertations

Active anting behavior occurs when songbirds apply ants to their feathers. During anting displays, a bird draws its wings forward in front of the head and swings its tail around to the far right or left. Both wing and tail feathers are then rubbed with ants held in the bird's beak. The potential associations among ants, feather ectoparasites and birds make anting behavior an important community-level interaction. Although this behavior is cosmopolitan in distribution and occurs in a wide variety of passerine birds, it remains poorly understood. This dissertation tested hypotheses about anting behavior through controlled experiments with captive songbirds …

Summer Vertical Phytoplankton Distribution In The Lower Chesapeake Bay, Mollie Jill Weinstein

Biological Sciences Theses & Dissertations

Autotrophic picoplankton and phytoplankton composite samples were collected from the surface, pycnocline, and bottom water layers at three stations in the lower Chesapeake Bay between June and September 1993. Using light microscopy a total of 170 phytoplankton taxa were identified. Utilizing epifluorescent microscopy, the picoplankton taxa were distinguished by size, representing species with cells less than 2 microns. Diatoms were the dominant taxa during this period, with lesser representation by the other phytoplankton components. Within the picoplankton category, cyanobacteria were dominant. Statistical analyses of the data indicated the vertical composition and abundance of the phytoplankton was not significantly different over …

Draft Plan Of Management For The Proposed Miaboolya Beach Fish Habitat Protection Area., Department Of Fisheries Western Australia

Fisheries Management Papers

The aims of the proposal outlined in this draft management plan is to protect and rehabilitate the aquatic habitat of Miaboolya Beach, the associated mangrove ecosystem, and involve the community in their management.

By setting the area aside as a FHPA, the Department of Fisheries will establish a framework to promote and actively conserve all the habitats within the Miaboolya system, as described in Section 3 of this document.