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Diet Of Three Mormoopid Bats (Mormoops Blainvillei, Pteronotus Quadridens, And Pteronotus Portoricensis ) On Puerto Rico, Ashley K. Rolfe Jan 2011

Diet Of Three Mormoopid Bats (Mormoops Blainvillei, Pteronotus Quadridens, And Pteronotus Portoricensis ) On Puerto Rico, Ashley K. Rolfe

Master's Theses and Doctoral Dissertations

This study used visual analysis to determine the percent volume and percent frequency of orders of insects in the guano of the Antillean ghost-faced bat (Mormoops blainvillei), sooty mustached bat (Pteronotus quadridens), and Puerto Rican mustached bat (Pteronotus portoricensis). The most common orders for all three species were Coleoptera, Hymenoptera, and Lepidoptera, although the relative proportions of these orders differed among species. Variation in diet was primarily due to species, but season, habitat, and sex also affected the composition of insects in the feces. In addition, species-level identification of prey was achieved through molecular techniques …


Using Whatman Fta® Cards To Collect Dna For Bird-Strike Identifications, Carla J. Dove, Nor Faridah Dahlan, Marcy A. Heacker, James F. Whatton Jan 2011

Using Whatman Fta® Cards To Collect Dna For Bird-Strike Identifications, Carla J. Dove, Nor Faridah Dahlan, Marcy A. Heacker, James F. Whatton

Human–Wildlife Interactions

Identification of species of birds is fundamental to implementation of all management and mitigation issues involving bird–aircraft collisions (bird strikes). Methods of identifying bird remains have recently been enhanced to include the use of molecular techniques but the degraded condition of the fi eld sample remains problematic. The Whatman FTA® card is a novel way to instantly fi x DNA and inhibit degradation of DNA samples post-collection. During 2008–2009, we analyzed >200 FTA cards containing tissue blots, body fluids, or blood samples from bird strikes to evaluate the performance of these cards in real-time situations. We analyzed the success of …


Development And Testing Of An Unmanned Aircraft System For Environmental Science, Jerald James Brady Jan 2011

Development And Testing Of An Unmanned Aircraft System For Environmental Science, Jerald James Brady

Open Access Theses & Dissertations

For some environmental science applications, Unmanned Aircraft Systems (UASs) are increasingly recognized for their capacity to collect remotely sensed data in a safer, more efficient and effective manner than is permitted with manned aircraft and satellite remote sensing platforms. To date, however, technological, human, and other challenges have constrained adoption of UASs in the environmental sciences. This study developed and tested a new UAS for an archetypical environmental science research group (stakeholder) composed of non-UAS experts. Specifically, this thesis: 1) Assessed the research and operational needs of the stakeholder to determine the optimum UAS platform; 2) Developed an Unmanned Aerial …


A Taxonomic Revision Of The New World Hypoponera Santschi, 1938 (Hymenoptera: Formicidae), Shawn Thomas Dash Jan 2011

A Taxonomic Revision Of The New World Hypoponera Santschi, 1938 (Hymenoptera: Formicidae), Shawn Thomas Dash

Open Access Theses & Dissertations

The New World taxa of the pantropic ant genus Hypoponera (Ponerinae: Ponerini) is revised for the first time. The 55 previously recognized taxa have been evaluated using morphological and, when possible, ecological and biogeographical data to resolve taxon validity and species limits. Currently I recognize 42 species of Hypoponera , a number of which are new. I propose the following taxonomic outline: Hypoponera agilis (Borgmeier), Hypoponera aliena (F. Smith), Hypoponera antoniensis (Forel) stat. nov., Hypoponera apateae sp. nov., Hypoponera capilosa sp. nov., Hypoponera clinei sp. nov., Hypoponera clavatula (Emery) [= fiebrigi (Forel) syn. nov., = neglecta (Santschi) syn. nov.], Hypoponera …


Comparative Conservation Genetics Of Two Endangered Darters, Percina Rex And Percina Jenkinsi, Anna L. George, David A. Neely, Richard L. Mayden Dec 2010

Comparative Conservation Genetics Of Two Endangered Darters, Percina Rex And Percina Jenkinsi, Anna L. George, David A. Neely, Richard L. Mayden

Southeastern Fishes Council Proceedings

No abstract provided.


Number 52 (December 2010), Southern Fishes Council Dec 2010

Number 52 (December 2010), Southern Fishes Council

Southeastern Fishes Council Proceedings

(December 2010) - Comparative Conservation Genetics of Two Endangered Darters, Percina rex and Percina jenkinsi By Anna L. George, David Neely, and Richard Mayden

Invasion of Gulf Menhaden in the Alabama River By T. Heath Haley, R. Kyle Bolton, and Carol E. Johnston

Southeastern Fishes Council State Reports

Minutes, Business Meeting, 35th Annual Meeting, Southeastern Fishes Council

2009 Treasurer's Report for the Southeastern Fishes Council


Ecology And Transmission Of Buruli Ulcer Disease: A Systematic Review, Richard W. Merritt, Edward D. Walker, Pamela L. C. Small, John R. Wallace, Paul D. R. Johnson, Mark Eric Benbow, Daniel A. Boakye Dec 2010

Ecology And Transmission Of Buruli Ulcer Disease: A Systematic Review, Richard W. Merritt, Edward D. Walker, Pamela L. C. Small, John R. Wallace, Paul D. R. Johnson, Mark Eric Benbow, Daniel A. Boakye

Biology Faculty Publications

Buruli ulcer is a neglected emerging disease that has recently been reported in some countries as the second most frequent mycobacterial disease in humans after tuberculosis. Cases have been reported from at least 32 countries in Africa (mainly west), Australia, Southeast Asia, China, Central and South America, and the Western Pacific. Large lesions often result in scarring, contractual deformities, amputations, and disabilities, and in Africa, most cases of the disease occur in children between the ages of 4–15 years. This environmental mycobacterium, Mycobacterium ulcerans, is found in communities associated with rivers, swamps, wetlands, and human-linked changes in the aquatic environment, …


Life History And Habitat Use Of The Juvenile Alabama Shad (Alosa Alabamae) In Northern Gulf Of Mexico Rivers, Paul Fraser Mickle Dec 2010

Life History And Habitat Use Of The Juvenile Alabama Shad (Alosa Alabamae) In Northern Gulf Of Mexico Rivers, Paul Fraser Mickle

Dissertations

The Alabama shad, Alosa alabamae, is an anadromous species that is in decline and has seen extirpations from impoundments as well as decreased water quality. Alabama shad live in the Gulf of Mexico and ascend Northern Gulf of Mexico Drainages to reproduce early in the year (January-May). The juveniles spend the majority of the year in these freshwater systems before emigrating out to the Gulf of Mexico as late as December.

This dissertation focuses on the juvenile life stages that occur within the Northern Gulf of Mexico drainages. Spawning conditions of the river, as well as the habitat and diet, …


Distributions Of Sharks Across A Continental Shelf In The Northern Gulf Of Mexico, J. Marcus Drymon, Sean P. Powers, John Dindo, Brian Dzwonkowski, Terry A. Henwood Dec 2010

Distributions Of Sharks Across A Continental Shelf In The Northern Gulf Of Mexico, J. Marcus Drymon, Sean P. Powers, John Dindo, Brian Dzwonkowski, Terry A. Henwood

University Faculty and Staff Publications

Declines in shark populations have sparked researchers and fishery managers to investigate more prudent approaches to the conservation of these fish. As managers strive to improve data collection for stock assessment, fisheries-independent surveys have expanded to include data-deficient areas such as coastal regions. To that end, a catch series from a nearshore survey off Alabama was combined with data from a concurrent offshore survey with identical methodology to examine the depth use of sharks across the continental shelf (2–366 m). The combined data set contained 22 species of sharks collected from 1995 to 2008: 21 species in the offshore data …


Twenty-Eight Years Of The Us-Lter Program: Experience, Results, And Research Questions, James R. Gosz, Robert B. Waide, John J. Magnuson Dec 2010

Twenty-Eight Years Of The Us-Lter Program: Experience, Results, And Research Questions, James R. Gosz, Robert B. Waide, John J. Magnuson

Long Term Ecological Research Network

The U.S. Long Term Ecological Research program (hereafter US-LTER) concentrates on ecological processes that play out at the time scales spanning decades to centuries. This focuses US-LTER research between the most common time scales for ecological studies (1-3 years; Tilman 1989; Figure 1) and the much longer temporal fact of disciplines such as paleoecology. The importance of the decade-to-century time scale is particularly evident in light of the rapid changes in ecological forcing functions that are occurring at a broad range of spatial scales (Millennium Ecosystem Assessment 2005, Intergovernmental Panel on Climate Change 2007). Long-term data sets from programs such …


The Landscape Similarity Toolbox: New Tools For Optimizing The Location Of Control Sites In Experimental Studies, Thomas E. Dilts, Jian Yang, Peter J. Weisberg Nov 2010

The Landscape Similarity Toolbox: New Tools For Optimizing The Location Of Control Sites In Experimental Studies, Thomas E. Dilts, Jian Yang, Peter J. Weisberg

Articles

Large‐scale manipulative experiments are critically important for linking ecological theory with land management at a relevant spatial scale. Statistically powerful inferential approaches such as the before‐after‐control‐impact design involve pairing a small number of treatment sites with control sites of analogous ecological structure and landscape context. Pairing treatment and control sites that are as analogous as possible is an important step to ensuring that differences are due to a treatment effect. The Landscape Similarity Toolbox provides tools for optimizing the location of potential control sites based upon the spatial characteristics of the treatment site.


Distribution And Genetic Structure Of Pocket Gophers (Genus Geomys) In Kansas, Zachary J. Schwenke Nov 2010

Distribution And Genetic Structure Of Pocket Gophers (Genus Geomys) In Kansas, Zachary J. Schwenke

Master's Theses or Doctor of Nursing Practice

The development of informed management practices and insightful research depends not only on an understanding of species natural history and ecology, but information regarding the distributions of these species and how they interact with adjacent taxa. The study of a species distribution can become complicated if the geographic variation within the species is not understood. Pocket gophers, including those in the genus Geomys, display morphological and chromosomal variation across their range, even within the same species. Genetic techniques, including Amplified Fragment Length Polymorphism (AFLP), have clarified population relationships and characterized zones of contact. Previous studies have suggested 2 species and …


A Regional Guidebook For Applying The Hydrogeomorphic Approach To The Functional Assessment, Hans Michael Williams, Adam J. Miller, Rachel Mcnamee, Charles V. Klimas Oct 2010

A Regional Guidebook For Applying The Hydrogeomorphic Approach To The Functional Assessment, Hans Michael Williams, Adam J. Miller, Rachel Mcnamee, Charles V. Klimas

eBooks

The Hydrogeomorphic (HGM) Approach is a method for developing and applying indices for the site-specific assessment of wetland functions. The HGM Approach was initially designed to be used in the context of the Clean Water Act Section 404 Regulatory Program permit review process to analyze project alternatives, minimize impacts, assess unavoidable impacts, determine mitigation requirements, and monitor the success of compensatory mitigation. However, a variety of other potential uses have been identified, including the design of wetland restoration projects, and management of wetlands.


Ranked Risk Assessment For Bycatch In Multiple Fisheries: A Bioregional Risk Assessment Method, Richard Evans, Brett W. Molony Oct 2010

Ranked Risk Assessment For Bycatch In Multiple Fisheries: A Bioregional Risk Assessment Method, Richard Evans, Brett W. Molony

Fisheries Research Reports

This report demonstrates a method to rapidly assess the cumulative risk to sustainability of bycatch species of multiple fisheries. The method draws on other techniques already published in scientific literature and adds a new cumulative ranked estimate of total catch across multiple fisheries.


Landscape Factors Impacting Survival Of Sympatric Red-Necked Wallabies (Macropus Rufogriseus) And Swamp Wallabies (Wallabia Bicolor) In Urbanized Areas, Karen Zusi Oct 2010

Landscape Factors Impacting Survival Of Sympatric Red-Necked Wallabies (Macropus Rufogriseus) And Swamp Wallabies (Wallabia Bicolor) In Urbanized Areas, Karen Zusi

Independent Study Project (ISP) Collection

Urbanization and infrastructure build-up often includes many processes that can damage the natural environment in surrounding areas. Road, powerline, and dam construction, as well as mining, drilling, and overall land-clearing, have severe impacts that resonate through the adjacent wildlife communities. Some species, however, are able to persist in the fringes of urban environments; the swamp wallaby, Wallabia bicolor, is one such example in Australia. A different species of macropod, the red-necked wallaby (Macropus rufogriseus), is similar to the swamp wallaby in many ways but has failed to persist in the outskirts of urban areas. This study aimed to quantitatively differentiate …


Stable Isotope Analysis Reveals Detrital Resource Base Sources Of The Tree Hole Mosquito, Aedes Triseriatus, Michael G. Kaufman, Kirsten S. Pelz-Stelinski, Donald A. Yee, Steven A. Juliano, Peggy H. Ostrom, Edward D. Walker Oct 2010

Stable Isotope Analysis Reveals Detrital Resource Base Sources Of The Tree Hole Mosquito, Aedes Triseriatus, Michael G. Kaufman, Kirsten S. Pelz-Stelinski, Donald A. Yee, Steven A. Juliano, Peggy H. Ostrom, Edward D. Walker

Faculty Publications

  1. Detritus that forms the basis for mosquito production in tree hole ecosystems can vary in type and timing of input. We investigated the contributions of plant‐ and animal‐derived detritus to the biomass of Aedes triseriatus (Say) pupae and adults by using stable isotope (15N and 13C) techniques in laboratory experiments and field collections.
  2. Laboratory‐reared mosquito isotope values reflected their detrital resource base, providing a clear distinction between mosquitoes reared on plant or animal detritus.
  3. Isotope values from field‐collected pupae were intermediate between what would be expected if a single (either plant or animal) detrital source dominated the …


My Life In Biology: Paul A. Johnsgard, Paul A. Johnsgard Sep 2010

My Life In Biology: Paul A. Johnsgard, Paul A. Johnsgard

Nebraska Bird Review

An autobiographical article by ornithologist Paul A. Johnsgard that spans his early years in North Dakota, undergraduate and graduate studies, his arrival and professional years at the University of Nebraska, his writings and writing influences, artwork, teaching and Cedar Point Biological Station, hunting and photography, conservation, religious beliefs, and numerous writing projects underway.


My Life In Biology: Paul A. Johnsgard, Paul A. Johnsgard Sep 2010

My Life In Biology: Paul A. Johnsgard, Paul A. Johnsgard

Papers in Ornithology

I was born in 1931 in the very small town of Christine, North Dakota, on the Red River about 20 miles south of Fargo. My granddad owned a general store there, and my father worked in that store for as long as we lived in Christine, which was until 1939. These were the Depression years, and my major memories of that time are of hot dusty streets in the summer and bitterly cold winters, when I had to walk across town to school. ...

Waterfowl became increasingly important to me because of my mother's cousin "Bud" Morgan, who at that …


The Identity Of Zachaenus Roseus Cope, 1890 (Anura: Species Inquirenda), Esteban O. Lavilla, J. J. Nuñez, F. E. Rabanal, José A. Langone, Rafael O. De Sá Aug 2010

The Identity Of Zachaenus Roseus Cope, 1890 (Anura: Species Inquirenda), Esteban O. Lavilla, J. J. Nuñez, F. E. Rabanal, José A. Langone, Rafael O. De Sá

Biology Faculty Publications

Zachaenus roseus Cope, 1890, has puzzled systematists working in southern South America. A single individual, the holotype, has ever been collected and this specimen is in extremely poor preservation condition. Herein, the precise location of the type locality of Z. roseus is determined based on a historical review of the literature. Furthermore, following a careful comparison with all species that inhabit the southern austral forest, and that could potentially correspond to Zachaenus roseus, we conclude that this taxon is placed in the synonymy of Eupsophus calcaratus (Günther, 1881)


Sierra Nevada Red Fox (Vulpes Vulpes Necator): A Conservation Assessment, John D. Perrine, Lori A. Campbell, Gregory A. Green Aug 2010

Sierra Nevada Red Fox (Vulpes Vulpes Necator): A Conservation Assessment, John D. Perrine, Lori A. Campbell, Gregory A. Green

Biological Sciences

One goal of the Sierra Nevada Forest Plan Amendment (SNFPA) 2001 and 2004 Records of Decision was to protect and recover native Sierra Nevada red fox (Vulpes vulpes necator) populations in the Sierra Nevada (USDA Forest Service 2001 p. 14). To accomplish this goal, the ROD commits the U.S. Department of Agriculture (USDA) Forest Service to completing a conservation assessment for the Sierra Nevada red fox in cooperation with other federal, state, and local agencies, as well as Tribal governments. This conservation assessment synthesizes the best available scientific information and thought concerning habitat relationships, population status and trends, historical and …


Detection Methods For The Genus Lysobacter And The Species Lysobacter Enzymogenes, Hu Yin Aug 2010

Detection Methods For The Genus Lysobacter And The Species Lysobacter Enzymogenes, Hu Yin

School of Biological Sciences: Dissertations, Theses, and Student Research

Strains of Lysobacter enzymogenes, a bacterial species with biocontrol activity, have been detected via 16S rDNA sequences in soil in different parts of the world. In most instances, however, their occurrence could not be confirmed by isolation, presumably because the species occurred in low numbers relative to faster-growing species of Bacillus or Pseudomonas. In this study, we developed DNA-based detection and enrichment culturing methods for Lysobacter spp. and L. enzymogenes specifically. In the DNA-based method, a region of 16S rDNA conserved among Lysobacter spp. (L4: GAG CCG ACG TCG GAT TAG CTA GTT), was used as the forward …


Temporal And Spatial Assessment Of Evaporation, Transpiration, And Soil Moisture Redistribution, Brian M. Bird Aug 2010

Temporal And Spatial Assessment Of Evaporation, Transpiration, And Soil Moisture Redistribution, Brian M. Bird

UNLV Theses, Dissertations, Professional Papers, and Capstones

At a native stand of creosote bush (Larrea tridentata) in North Las Vegas, a rainfall simulation study was conducted over a 12 month period from October 2005 to October 2006. Simulated rainfall occurred during the winter, spring, summer, and fall periods. Rainfall simulation systems were positioned on each of 12 plots, each containing a single creosote bush. Simulated rainfall events occurred at night with multiple short pulses designed to maximize infiltration while minimizing ponding. Yearly simulated rainfall amounts were set at 0, 15, 30 and 60 cm (replicated three times) and were approximately 0, 1.5, 3.0 and 6.0 times the …


Multidisciplinary Assessment And Documentation Of Past And Present Human Impacts On The Neotropical Forests Of Petén, Guatemala, Christopher Stephen Balzotti Jul 2010

Multidisciplinary Assessment And Documentation Of Past And Present Human Impacts On The Neotropical Forests Of Petén, Guatemala, Christopher Stephen Balzotti

Theses and Dissertations

Tropical forests provide important habitat for a tremendous diversity of plant and animal species. However, limitations in measuring and monitoring the structure and function of tropical forests has caused these systems to remain poorly understood. Remote-sensing technology has provided a powerful tool for quantification of structural patterns and associating these with resource use. Satellite and aerial platforms can be used to collect remotely sensed images of tropical forests that can be applied to ecological research and management. Chapter 1 of this article highlights the resources available for tropical forest remote sensing and presents a case-study that demonstrates its application to …


Evolution Of Host Associations In Symbiotic Zoanthidea, Timothy D. Swain Jul 2010

Evolution Of Host Associations In Symbiotic Zoanthidea, Timothy D. Swain

Oceanography Faculty Theses and Dissertations

Symbioses are pervasive in life and confer novel adaptive capabilities that enable ecological expansion into unexplored niches. Evolutionary transitions in symbiosis (terminations, origins, host shifts, or changes in relationship outcomes) can therefore have dramatic effects on the fitness, life history, and distribution of organisms. Because symbiotic interactions require coordination among traits that control recognition, colonization, and maintenance of symbiosis, transitions in symbiosis should generally be rare and conserved across evolutionary time. Cnidarians in the order Zoanthidea (class Anthozoa) are symbionts of taxa representing at least five invertebrate phyla and occur in most major benthic habitats from the intertidal to the …


Present Effects Of Past Wildfires On Leaf Litter Breakdown In Stream Ecosystems, Peter Koetsier, Teresa R. B. Krause, Quenton M. Tuckett Jul 2010

Present Effects Of Past Wildfires On Leaf Litter Breakdown In Stream Ecosystems, Peter Koetsier, Teresa R. B. Krause, Quenton M. Tuckett

Biology Faculty Publications and Presentations

We investigated the present effects from a 10-year-old wildfire on leaf litter breakdown rates in 3 headwater streams in central Idaho. These systems experienced a massive debris flow one year after the fire. Based on soil instability and burn patterns, we identified 3 stream conditions: unburned, burned only, and burned/scoured. We placed leaf bags containing willow leaves (Salix sp.) in each stream type and removed bags at various time intervals until all bags were collected 100 days after their introduction. Leaf material was dried and weighed, and decay rate coefficients were calculated. Macroinvertebrates colonizing the bags were enumerated and identified, …


Community Structure And Dynamics Of Monogenea And Trematoda In Three North American Cyprinid Species In The Salt Valley Watershed, Nebraska, Alaine Kathryn Knipes Jul 2010

Community Structure And Dynamics Of Monogenea And Trematoda In Three North American Cyprinid Species In The Salt Valley Watershed, Nebraska, Alaine Kathryn Knipes

School of Biological Sciences: Dissertations, Theses, and Student Research

An investigation was made of the communities of gill monogene genus Dactylogyrus (Platyhelminthes, Monogenea) and the populations of blackspot parasite (Platyhelminthes, Trematoda) of Pimephales promelas, Notropis stramineus, and Semotilus atromaculatus in 3 distinct sites along the 3 converging tributaries in southeastern Nebraska from 2004 to 2006. This work constitutes the first multi-site, multi-year study of a complex community of Dactylogyrus spp. and their reproductive activities on native North American cyprinid species. The biological hypothesis that closely related species with direct lifecycles respond differently to shared environmental conditions was tested. It was revealed that in this system that, Cyprinid …


Location-Specific Responses To Thermal Stress In Larvae Of The Reef-Building Coral Montastraea Faveolata, Nicholas R. Polato, Christian Voolstra, Julia Schnetzer, Michael K. Desalvo, Carly J. Randall, Alina M. Szmant, Mónica Medina, Iliana B. Baums Jun 2010

Location-Specific Responses To Thermal Stress In Larvae Of The Reef-Building Coral Montastraea Faveolata, Nicholas R. Polato, Christian Voolstra, Julia Schnetzer, Michael K. Desalvo, Carly J. Randall, Alina M. Szmant, Mónica Medina, Iliana B. Baums

Ocean Engineering and Marine Sciences Faculty Publications

The potential to adapt to a changing climate depends in part upon the standing genetic variation present in wild populations. In corals, the dispersive larval phase is particularly vulnerable to the effects of environmental stress. Larval survival and response to stress during dispersal and settlement will play a key role in the persistence of coral populations. Methodology/Principal Findings: To test the hypothesis that larval transcription profiles reflect location-specific responses to thermal stress, symbiont-free gametes from three to four colonies of the scleractinian coral Montastraea faveolata were collected from Florida and Mexico, fertilized, and raised under mean and elevated (up 1 …


Distinguishing Technology From Biology: A Critical Review Of The Use Of Gps Telemetry Data In Ecology, Mark Hebblewhite, Daniel T. Haydon Jun 2010

Distinguishing Technology From Biology: A Critical Review Of The Use Of Gps Telemetry Data In Ecology, Mark Hebblewhite, Daniel T. Haydon

Biological Sciences Faculty Publications

In the past decade, ecologists have witnessed vast improvements in our ability to collect animal movement data through animal-borne technology, such as through GPS or ARGOS systems. However, more data does not necessarily yield greater knowledge in understanding animal ecology and conservation. In this paper, we provide a review of the major benefits, problems and potential misuses of GPS/Argos technology to animal ecology and conservation. Benefits are obvious, and include the ability to collect fine-scale spatio-temporal location data on many previously impossible to study animals, such as ocean-going fish, migratory songbirds and long-distance migratory mammals. These benefits come with significant …


Correlation And Studies Of Habitat Selection: Problem, Red Herring Or Opportunity?, John Fieberg, Jason Matthiopoulos, Mark Hebblewhite, Mark S. Boyce, Jacqueline L. Frair Jun 2010

Correlation And Studies Of Habitat Selection: Problem, Red Herring Or Opportunity?, John Fieberg, Jason Matthiopoulos, Mark Hebblewhite, Mark S. Boyce, Jacqueline L. Frair

Biological Sciences Faculty Publications

With the advent of new technologies, animal locations are being collected at ever finer spatio-temporal scales. We review analytical methods for dealing with correlated data in the context of resource selection, including post hoc variance inflation techniques, ‘two-stage’ approaches based on models fit to each individual, generalized estimating equations and hierarchical mixed-effects models. These methods are applicable to a wide range of correlated data problems, but can be difficult to apply and remain especially challenging for use–availability sampling designs because the correlation structure for combinations of used and available points are not likely to follow common parametric forms. We also …


Estuarine Nitrifiers: New Players, Patterns And Processes, Anne E. Bernhard, Annette Bollmann Jun 2010

Estuarine Nitrifiers: New Players, Patterns And Processes, Anne E. Bernhard, Annette Bollmann

Biology Faculty Publications

Ever since the first descriptions of ammonia-oxidizing Bacteria by Winogradsky in the late 1800s, the metabolic capability of aerobic ammonia oxidation has been restricted to a phylogenetically narrow group of bacteria. However, the recent discovery of ammonia-oxidizing Archaea has forced microbiologists and ecologists to re-evaluate long-held paradigms and the role of niche partitioning between bacterial and archaeal ammonia oxidizers. Much of the current research has been conducted in open ocean or terrestrial systems, where community patterns of archaeal and bacterial ammonia oxidizers are highly congruent. Studies of archaeal and bacterial ammonia oxidizers in estuarine systems, however, present a very different …