Digital Commons Network^™

Msh1 Influence On Plant Mitochondrial Genome Recombination And Phenotype In Tobacco, Peibei Sun

School of Biological Sciences: Dissertations, Theses, and Student Research

Plant mitochondrial genomes are composed of unusually complex structures, due to active recombination at numerous repeated sequences in the genome. The maintenance of mitochondrial genome stability is under the control of identifiable nuclear genes. In plants, three nuclear genes (MSH1, RECA3 and OSB1) have been shown to participate in recombination surveillance and the suppression of illegitimate recombination in mitochondria. Disruption of these loci in Arabidopsis results in reproducible mitochondrial genome rearrangements. We demonstrated that repeat-mediated de novo recombination was also enhanced in both Arabidopsis and tobacco during passage through in vitro culture. Furthermore, in vitro conditions led …

Tracking Large Carnivore Dispersal Using Isotopic Clues In Claws: An Application To Cougars Across The Great Plains, Viviane Hénaux, Larkin A. Powell, Keith A. Hobson, Clayton Kent Nielsen, Michelle A. Larue

School of Natural Resources: Faculty Publications

1. Cougar (Puma concolor) populations, like other large carnivores, have increased during recent decades and may be recolonizing their former ranges in Midwestern North America. The dispersal routes taken by these animals from established populations are unknown and insight into these movements would facilitate their conservation and management.

2. We inferred the origin and migration route of four dispersing cougars using stable hydrogen (δD) and carbon (δ¹³C) isotope values along one of their claws. We compared isotopic variations within claws to regional and large-scale isoscapes of δD and δ¹³C values in prey species. Using …

Demasculinization And Feminization Of Male Gonads By Atrazine: Consistent Effects Across Vertebrate Classes, Krista A. Mccoy

Integrative Biology Faculty and Staff Publications

Atrazine is the most commonly detected pesticide contaminant of ground water, surface water, and precipitation. Atrazine is also an endocrine disruptor that, among other effects, alters male reproductive tissues when animals are exposed during development. Here, we apply the nine so-called “Hill criteria” (Strength, Consistency, Specificity, Temporality, Biological Gradient, Plausibility, Coherence, Experiment, and Analogy) for establishing cause–effect relationships to examine the evidence for atrazine as an endocrine disruptor that demasculinizes and feminizes the gonads of male vertebrates. We present experimental evidence that the effects of atrazine on male development are consistent across all vertebrate classes examined and we present a …

Nitrogen Acquisition By Annual And Perennial Grass Seedlings: Testing The Roles Of Performance And Plasticity To Explain Plant Invasion, A. J. Leffler, T. A. Monaco, J. J. James

Natural Resource Management Faculty Publications

Differences in resource acquisition between native and exotic plants is one hypothesis to explain invasive plant success. Mechanisms include greater resource acquisition rates and greater plasticity in resource acquisition by invasive exotic species compared to non-invasive natives. We assess the support for these mechanisms by comparing nitrate acquisition and growth of invasive annual and perennial grass seedlings in western North America. Two invasive exotic grasses (Bromus tectorum and Taeniatherum caput-medusae) and three perennial native and exotic grasses (Pseudoroegneria spicata, Elymus elymoides, and Agropyron cristatum) were grown at various temperatures typical of autumn and springtime when resource are abundant and dominance …

Distribution Of The American Milliped Genus Boraria Chamberlin, 1943: Introductions Of B. Stricta (Brölemann, 1896) In New York And B. Infesta (Chamberlin, 1918) In Connecticut; Indigenous Occurrence Of B. Profuga (Causey, 1955) In Louisiana (Diplopoda: Polydesmida: Xystodesmidae)., Rowland M. Shelley, Chris T. Mcallister, Christopher M. Nagy, Mark E. Weckel, Roderick G. Christie, Paul Wilson, Allan Wilson

Insecta Mundi

The southern Appalachian millipeds Boraria stricta (Brölemann, 1896) and B. infesta (Chamberlin, 1918) (Diplopoda: Polydesmida: Xystodesmidae) have become established in Westchester Co., New York, and Hartford Co., Connecticut, respectively. Only three individuals are available for the latter, but B. stricta has established a reproducing population in southern New York state. This species is also recorded from Bland Co., Virginia, in the Ridge and Valley Physiographic Province. Boraria profuga (Causey, 1955) comprises two allopatric populations, one in Montgomery Co., Arkansas, and the other in Ouachita Parish, Louisiana. Distributional records and gonopod drawings are presented for these species plus B. deturkiana (Causey, …

The Fecal Viral Flora Of Wild Rodents, Tung G. Phan, Beatrix Kapusinszky, Chunlin Wang, Robert K. Rose, Howard L. Lipton, Eric L. Delwart

Biological Sciences Faculty Publications

The frequent interactions of rodents with humans make them a common source of zoonotic infections. To obtain an initial unbiased measure of the viral diversity in the enteric tract of wild rodents we sequenced partially purified, randomly amplified viral RNA and DNA in the feces of 105 wild rodents (mouse, vole, and rat) collected in California and Virginia. We identified in decreasing frequency sequences related to the mammalian viruses families Circoviridae, Picobirnaviridae, Picornaviridae, Astroviridae, Parvoviridae, Papillomaviridae, Adenoviridae, and Coronaviridae. Seventeen small circular DNA genomes containing one or two replicase genes distantly related to the Circoviridae representing several potentially …

Severe 2010 Cold-Water Event Caused Unprecedented Mortality To Corals Of The Florida Reef Tract And Reversed Previous Survivorship Patterns, Diego Lirman, Stephanie Schopmeyer, Derek Manzello, Lewis J. Gramer, William F. Precht, Frank E. Muller-Karger, Kenneth Banks, Brian Barnes, Erich Bartels, Amanda Bourque, James Byrne, Scott Donahue, Janice Duquesnel, Louis Fisher, David S. Gilliam, James C. Hendee, Meaghan E. Johnson, Kerry Maxwell, Erin Mcdevitt, Jamie Monty, Digna Rueda, Rob Ruzicka, Sara Thanner

Marine & Environmental Sciences Faculty Articles

Background

Coral reefs are facing increasing pressure from natural and anthropogenic stressors that have already caused significant worldwide declines. In January 2010, coral reefs of Florida, United States, were impacted by an extreme cold-water anomaly that exposed corals to temperatures well below their reported thresholds (16°C), causing rapid coral mortality unprecedented in spatial extent and severity.

Methodology/Principal Findings

Reef surveys were conducted from Martin County to the Lower Florida Keys within weeks of the anomaly. The impacts recorded were catastrophic and exceeded those of any previous disturbances in the region. Coral mortality patterns were directly correlated to in-situ and satellite-derived …

In Situ Infrared Videography Of Sand Scorpion Nighttime Surface Activity, Douglas D. Gaffin

Euscorpius

Sand scorpions make burrows from which they emerge at night to seek mates and prey. Previous ecological studies have documented scorpion activities on the sand surface. Few studies, however, have videotaped scorpion movements in the context of understanding their sensory neurobiology. Our objective is to understand which signals guide scorpions as they emerge from and return to their burrows. Candidate stimuli include chemical trails, footsteps, celestial patterns, geomagnetic cues, humidity and/or temperature gradients, distinctive scents from the burrow, seismic echolocation, memory, or landmark orientation. We videotaped scorpions to learn whether they return to their burrows by the same path they …

Temperature Thresholds And Degree-Day Model For Marmara Gulosa (Lepidoptera: Gracillariidae), M. J. O'Neal, David H. Headrick, Gregory H. Montez, E.E. Grafton-Cardwell

Horticulture and Crop Science

The developmental thresholds for Marmara gulosa Guillen & Davis (Lepidoptera: Gracillariidae) were investigated in the laboratory by using 17, 21, 25, 29, and 33°C. The lowest mortality occurred in cohorts exposed to 25 and 29°C. Other temperatures caused >10% mortality primarily in egg and Þrst and second instar sap-feeding larvae. Linear regression analysis approximated the lower developmental threshold at 12.2°C. High mortality and slow developmental rate at 33°C indicate the upper developmental threshold is near this temperature. The degree-day (DD) model indicated that a generation requires an accumulation of 322 DD for development from egg to adult emergence. Average daily …

Addressing Biased Occurrence Data In Predicting Potential Sierra Nevada Red Fox Habitat For Survey Prioritization, Casey Cleve, John D. Perrine, Barbara Holzman, Ellen Hines

Biological Sciences

The Sierra Nevada red fox Vulpes vulpes necator is listed as a threatened species under the California Endangered Species Act. It originally occurred throughout California’s Cascade and Sierra Nevada mountain regions. Its current distribution is unknown but should be determined in order to guide management actions. We used occurrence data from the only known population, in the Lassen Peak region of northern California, combined with climatic and remotely sensed variables, to predict the species’ potential distribution throughout its historic range. These model predictions can guide future surveys to locate additional fox populations. Moreover, they allow us to compare the relative …

Climate And Vegetation Change In The Newberry Mountains, Southern Clark County, Nevada, Ross Joseph Guida

UNLV Theses, Dissertations, Professional Papers, and Capstones

Ecological studies have shown worldwide that vegetation is being affected by climate change. Species are shifting to new elevations and physiographic positions to adapt to changes in their environment. More specifically, paleoecology studies in the Mojave Desert have shown shifting vegetation patterns in response to past warming and precipitation changes. Recent studies have shown mortality among desert plants related to extended drought and warming. However, few studies have shown how the geographic distribution of Mojave Desert species has changed during this most recent period of warming. This study addresses this gap in the literature by focusing on several plant species …

Diet And Feeding-Related Morphometrics Of The Blackstripe Topminnow, Fundulus Notatus, In Allotropic And Syntopic Populations With The Blackspotted Topminnow, Fundulus Olivaceus, Charles Michael Champagne

Master's Theses

The Fundulus notatus species complex consists of three described species: F. notatus, F. olivaceus and F. euryzonus. Both F. notatus and F. olivaceus have broad overlapping ranges with many populations being found within and outside of contact zones. Contact zones are generally found in midreaches with F. olivaceus dominating headwaters and F. notatus in larger rivers downstream. Both species share similar ecological niches so the mechanism allowing for stable coexistence in contact zones is unknown. The purpose of this study was to examine variability in diet and feeding morphology of F. notatus in syntopic and allotopic populations across …

The Decline And Conservation Status Of North American Bumble Bees, Jonathan B. Koch

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Several reports of North American bumble bee (Bombus Latreille) decline have been documented across the continent, but no study has fully assessed the geographic scope of decline. In this study I discuss the importance of Natural History Collections (NHC) in estimating historic bumble bee distributions and abundances, as well as in informing current surveys. To estimate changes in distribution and relative abundance I compare historic data assembled from a >73,000 specimen database with a contemporary 3-year survey of North American bumble bees across 382 locations in the contiguous U.S.A. Based on my results, four historically abundant bumble bees, B. …

Role Of Belowground Fungal Mutualisms And Nutrient Cycling Alteration In Invasion Success Of Polygonum Cuspidatum Sieb. & Zucc. (Polygonaceae) In The Eastern United States, Gretchen Addington

All Theses

Plant species invasion is problematic around the world due to its negative effects on native plant biodiversity, ecosystem function, and ecosystem stability. Understanding the mechanisms of plant species invasion is necessary to predict new invasions and to control current problematic species. Polygonum cuspidatum Sieb. & Zucc. (Polygonaceae, Japanese Knotweed) is an invasive species found in 40 of the 50 United States and listed as a noxious species in nine states. It is known to exclude native plant communities, and its eradication is nearly impossible. The extensive negative effects associated with this species make understanding its mechanism of invasion a prerogative. …

Changes In Life History Within An Individual's Lifetime, Eric J. Billman

Theses and Dissertations

A central goal of life history theory is to understand the selective factors that generate the diversity of reproductive patterns observed in nature. Within lifetime changes in reproductive investment will determine an organism's fitness; however, this area of life history theory has received less attention than comparisons among population that characterize life history traits as a single population mean. Reproductive allocation can be affected by multiple cues; the integration of these cues across an organism's lifetime generates the diversity in life history strategies observed in nature. Life history studies should examine the interacting effects of multiple cues on life history …

Frequency Of Extended Diapause In Nebraska Populations Of Diabrotica Barberi Smith And Lawrence, Ryan W. Geisert

Department of Entomology: Dissertations, Theses, and Student Research

This study was conducted to measure the frequency of extended diapause in populations of the northern corn rootworm, Diabrotica barberi Smith and Lawrence from eastern Nebraska. Adult D. barberi collections were made during late summer 2008 and 2009 from eight sites each year (seven sites were consistent over years). Eggs were obtained from 12-20 females per site and were held on moist soil under appropriate temperature profiles to facilitate egg survival, diapause development, and diapause termination within and among years. Percentage egg hatch was recorded after the first and second year for the 2008 collection and after the first year …

Spatial Estimation Of Euphausiid Biomass Along The Pacific Coast Of Eastern Hokkaido, Japan In Early Summer Of 2008, Naoki Tojo, Kenji Minami, Ryuichi Matsukura, Yohei Kawauchi, Tetsuichiro Funamoto, Masayuki Chimura, Akira Nishimura, Kazushi Miyashita

Journal of Marine Science and Technology–Taiwan

This study focused on euphausiid distribution and biomass estimation over the coastal shelf of the Pacific coast of Hokkaido Japan in early summer 2008. Acoustic data were obtained in both day (6:00-18:00) and night (18:00-6:00) using a quantitative echosounder (EK60, Simrad) with two frequencies (120 and 38 kHz). Echoes of euphausiids were specified based on the ΔMVBS, calculated with seasonal theoretical target strength of Euphausia pacifica. The best-fit kriging models were used to quantitatively interpolate euphausiid distribution. The detected euphausiid biomass reached 38,278 t (> 15 gWWm-2), suggesting abundant prey for large fishes over study area. On the other hand, …

Personality Traits Predict Hierarchy Rank In Male Rainbowfish Social Groups, Mathieu Colléter, Culum Brown

Sentience Collection

Personality traits are becoming increasingly important in explaining adaptive individual differences in animal behaviour and probably represent a leading edge of the evolutionary process. Despite the newfound interest in animal personality among behavioural ecologists, fewstudies have investigated the link between personality traits and fitness measures. We examined this link using male rainbowfish, Melanotaenia duboulayi, as a model species and found that a range of personality traits (aggression, activity and boldness) covaried with a male’s position in a hierarchy, which is directly related to reproductive success in this and many other species. Dominant fish were more aggressive, active, bold and also …

Distribution Of Crayfish Species In Select North Dakota Streams, Cari-Ann Hayer, Terrance L. Velazquez, Mclain S. Johnson, Brian Graeb

The Prairie Naturalist

Crayfish have an integral role in aquatic ecosystems, serving as herbivores, predators, detritivores, and prey for fishes and other aquatic and terrestrial animals (Momot 1995, Taylor et al. 1996, Martin 1997). Many crayfish populations are currently declining as a result of habitat alteration (Taylor et al. 1996) and invasive predators (e.g., rusty crayfish Orconectes rusticus [Girard; Lodge et al. 2000]). Knowledge of crayfish distribution and biology in North America and specifically North Dakota is sparse or lacking (Taylor et al. 1996) and baseline information is necessary to identify effects of anthropogenic alterations. Early inventories documented 3 crayfish species in North …

Habitat Selection By Female Swift Foxes (Vulpes Velox) During The Pup- Rearing Season, Indrani Sasmal, Jonathan A. Jenks, Troy W. Grovenburg, Shubham Datta, Greg. M. Schroeder, Robert W. Klaver, Kevin M. Honness

The Prairie Naturalist

The swift fox (Vulpes velox) was historically distributed in western South Dakota including the region surrounding Badlands National Park (BNP). The species declined during the mid-1800s, largely due to habitat loss and poisoning targeted at wolves (Canis lupis) and coyotes (C. latrans). Only a small population of swift foxes near Ardmore, South Dakota persisted. In 2003, an introduction program was initiated at BNP with swift foxes translocated from Colorado and Wyoming. We report on habitat use by female swift foxes during the pup-rearing season (May–July) in 2009. Analyses of location data from 13 radiomarked female foxes indicated disproportional use (P < 0.001) of some habitats relative to their availability within swift fox home ranges. Swift foxes used grassland (ŵ = 1.01), sparse vegetation (ŵ = 1.43) and prairie dog towns (ŵ = 1.18) in proportion to their availability, whereas they were less likely to use woodland (ŵ = 0.00), shrubland (ŵ = 0.14), pasture/agricultural-land (ŵ = 0.25) and development (ŵ = 0.16) relative to availability. Swift foxes typically are located in habitats that provide greater visibility, such as shortgrass prairie and areas with sparse vegetation; which allow detection of approaching coyotes (e.g., primary predator of swift foxes).

Phragmites Australis In South Dakota: Historical Distribution And Environment, Carol A. Johnston, Kayla L. Miller

The Prairie Naturalist

Common reed, Phragmites australis, has long been a component of Northern Plains wetlands, but impending invasion by the non-native P. australis haplotype M may displace native haplotypes in the future. To increase understanding of historical Phragmites occurrence, we developed a geographic information system (GIS) protocol to improve the georeferencing of specimens from South Dakota herbaria, and mapped the distribution of Phragmites relative to geology, physiographic regions, and water bodies. There were 91 Phragmites herbarium specimens from South Dakota and adjacent Wyoming. Phragmites collections occurred in nearly all physiographic regions of the state, with concentrations occurring in the Prairie Coteau of …

Changes In Leaf Morphology, Photosynthesis And Nitrogen Content In Two Coastal Shrubs, Elizabeth Kost

Theses and Dissertations

It is important to understand mechanisms that facilitate expansion of two common shrubs, Morella cerifera and Baccharis halimifolia in coastal environments. The purpose of my study was to investigate the physiological and structural changes that occur as leaves age. Photosynthesis, incident light, chlorophyll, and leaf C:N ratios were quantified for young, intermediate, and old leaves (distal, central and proximal leaves, respectively). Leaf structural differences were also compared. Leaves did not change morphologically with age. Light decreased with leaf age and during winter months. Photosynthesis showed no seasonal or age related patterns. Chlorophyll increased initially and then declined with age due …

Riparian Bird-Habitat Association Models: A Framework For Informing Management And Developing Restoration Guidelines In Utah, Hillary M. White

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Approximately 75% of the avian species in Utah use riparian habitats at some time during their life cycles and at least 80% of this habitat in Utah has been lost or altered since settlement; currently 0.6% of land cover in Utah is considered riparian. In 1992, with the support of Utah Partner's in Flight, the Utah Division of Wildlife Resources began a statewide neotropical migratory bird (NTMB) and habitat monitoring program to assess the status of bird populations at 31 sites. Additional sites (up to 52) were added in later years; bird and habitat assessments at 37 riparian sites have …

Summaries Of Arkansas Cotton Research 2010, Derrick M. Oosterhuis

Arkansas Agricultural Experiment Station Research Series

No abstract provided.

Effects Of Gypsy Moth Outbreaks On North American Woodpeckers, Walter D. Koenig, Eric L. Walters, Andrew M. Liebhold

Biological Sciences Faculty Publications

We examined the effects of the introduced gypsy moth (Lymantria dispar) on seven species of North American woodpeckers by matching spatially explicit data on gypsy moth outbreaks with data on breeding and wintering populations. In general, we detected modest effects during outbreaks: during the breeding season one species, the Red-headed Woodpecker (Melanerpes erythrocephalus), increased over pre-outbreak levels, while during the winter one species, the Yellow-bellied Sapsucker (Sphyrapicus varius), increased and one, the Downy Woodpecker (Picoides pubescens), decreased from pre-outbreak levels. Responses following outbreaks were similarly variable, and in general we were unsuccessful …

15n Tracer And Modeling Analyses Of Nutrient Transport Through Lakes In A Subalpine Watershed, David M. Epstein

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Lakes have historically been overlooked as important nutrient processors within their watersheds. In general ecologists have focused on streams as zones of uptake and transformation, while viewing lakes as simple nutrient traps. However, recent research has highlighted the large influence that lakes may have on water chemistry within their watersheds. Within the field of limnology, researchers have traditionally focused on the pelagic zone for in-lake production. Further research in shallow lakes has highlighted the role benthic production within the littoral zone plays in the lake ecosystem. The greater influence of lakes is highlighted when comparing watersheds containing lakes with watersheds …

An Ecological, Genetic, And Reproductive Study Of Big Bluestem (Andropogon Gerardii) Populations In The Carolinas, Robert Tompkins

All Dissertations

ABSTRACT
AN ECOLOGICAL, GENETIC, AND REPRODUCTIVE STUDY OF BIG BLUESTEM (ANDROPOGON GERARDII) POPULATIONS IN THE CAROLINAS
Andropogon gerardii (Big Bluestem) is a dominant grass of the North American tallgrass prairie and is also found in remnant populations in the eastern U.S., including North and South Carolina. This research included a systematic study of the ecology, genetics, and reproductive potential within and among A. gerardii populations in the Carolinas. Floristic composition and edaphic (soil) features were characterized for eight A. gerardii populations across various physiographic regions of North and South Carolina. A total of 362 quadrats (1 m x 1 m) …

An Ecological Study Of Peregrine Falcons (Falco Peregrinus) At Lake Mead National Recreation Area, 2006-2010, Joseph Graham Barnes

UNLV Theses, Dissertations, Professional Papers, and Capstones

Peregrine Falcons (Falco peregrinus) represent an encouraging conservation biology success story in North America during the twentieth century. Their distribution and population size suffered major restrictions after the initiation of widespread application of the synthetic pesticide dichloro-diphenyl-trichloroethane (DDT) within the U.S. in the 1940s. The species was federally listed as endangered in the U.S. in 1969 and was then delisted in 1999 after DDT was banned in 1972. Herein, I present my ecological research of peregrines within Lake Mead National Recreation Area (LMNRA), concentrating on the years 2006-2010. This thesis is comprised of two chapters. In the first chapter, I …

Co-Development Of Biological Soil Crusts, Soil-Geomorphology, And Landscape Biogeochemistry In The Mojave Desert, Nevada, U.S.A. – Implications For Ecological Management, Amanda Jean Williams

UNLV Theses, Dissertations, Professional Papers, and Capstones

Biological soil crusts (BSCs) are complex matrices of soil particles, mosses, lichens, and cyanobacteria that prevent erosion and influence water and energy balances, soil fertility, and vascular plant germination. The processes that form BSCs, the factors that control their distribution, and the ecosystem feedbacks that they sustain are poorly understood. This dissertation employed a novel interdisciplinary approach to address those research unknowns through investigations of the micromorphological structure, soil-geomorphic relationships, and biogeochemical feedbacks of BSCs in the Mojave Desert.

A micromorphological study of BSCs resulted in a succession model that illustrates how crust formative processes and structures change through time. …

Establishing Weed Prevention Areas And Evaluating Their Impact, Stephanie Christensen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The spread of invasive weeds continues to be a serious economic and environmental threat. Weed prevention has the potential to stop weeds before they become well established in an area conserving time, energy, and resources. Unfortunately, weed prevention is often overlooked. Weed Prevention Areas (WPAs) are a relatively new tool developed to help improve the application of weed prevention. They are cooperatively managed areas that focus on implementing prevention and early detection strategies at a community level. The purpose of this research was to establish baseline data that will be used to evaluate the overall effectiveness of the WPA concept, …