Digital Commons Network^™

Establishing Tobacco Origin From Pollen Identification: An Approach To Resolving The Debate, Shane Williams, Shelby Hubbard, Karl Reinhard, Sérgio Augusto De Miranda Chaves

Karl Reinhard Publications

Previous research into pollen content of tobacco resulted in a debate. We address this debate and determine that pollen analysis may be able to assist with identifying geographical origin of tobacco. However, the value of any results should be assessed on a case-by-case regional basis until sufficient database information is available for an objective interpretation to be undertaken on a global basis. As a first step toward developing comparative data for South America, we analyzed a tobacco sample from Brazil in an effort to identify signature taxa from the state of Minas Gerais. We also assessed the role of honey …

Interview With Steven R. Winiger (Fa 779), Manuscripts & Folklife Archives

Folklife Archives Oral Histories

Transcription of an interview with Steven R. Winiger by Sara E. Carrico about family farms and farming in south central Kentucky.

Interview With Kenton L. Winiger (Fa 779), Manuscripts & Folklife Archives

Folklife Archives Oral Histories

Transcription of an interview with Kenton L. Winiger by Sara E. Carrico about family farms and farming in south central Kentucky.

Nuwuvi (Southern Paiute) Ecological Knowledge Of Piñon-Juniper Woodlands: Implications For Conservation And Sustainable Resource Use In Two Southern Nevada Protected Areas, Brian John Lefler

Dissertations and Theses

Nuwuvi (Southern Paiute) have inhabited the southern Great Basin for thousands of years, and consider Nuvagantu (where snow sits) in the Spring Mountains landscape to be the locus of their creation as a people. Their ancestral territory spans parts of Nevada, Utah, Arizona, and California. My research identifies and describes the heterogeneous character of Nuwuvi ecological knowledge (NEK) of piñon-juniper woodland ecosystems within two federal protected areas (PAs) in southeastern Nevada, the Spring Mountains National Recreation Area (SMNRA) and the Desert National Wildlife Refuge (DNWR), as remembered and practiced to varying degrees by 22 select Nuwuvi knowledge holders. I focus …

Collapse Of An Ecological Network In Ancient Egypt, Justin Yeakel, Mathias Pires, Lars Rudolf, Nathaniel Dominy

Dartmouth Scholarship

The dynamics of ecosystem collapse are fundamental to determining how and why biological communities change through time, as well as the potential effects of extinctions on ecosystems. Here, we integrate depictions of mammals from Egyptian antiquity with direct lines of paleontological and archeological evidence to infer local extinctions and community dynamics over a 6,000-y span. The unprecedented temporal resolution of this dataset enables examination of how the tandem effects of human population growth and climate change can disrupt mammalian communities. We show that the extinctions of mammals in Egypt were nonrandom and that destabilizing changes in community composition coincided with …

Effects Of Extreme Climate Events On Tea (Camellia Sinensis) Functional Quality Validate Indigenous Farmer Knowledge And Sensory Preferences In Tropical China, Selena Ahmed, John Richard Stepp, Colin M. Orians, Timothy S. Griffin, Corene Matyas, Albert Robbat, Sean Cash, Dayuan Xue, Chunlin Long, Uchenna Unachukwu, Sarabeth Buckley, Edward J. Kennelly

Publications and Research

Climate change is impacting agro-ecosystems, crops, and farmer livelihoods in communities worldwide. While it is well understood that more frequent and intense climate events in many areas are resulting in a decline in crop yields, the impact on crop quality is less acknowledged, yet it is critical for food systems that benefit both farmers and consumers through high-quality products. This study examines tea (Camellia sinensis; Theaceae), the world’s most widely consumed beverage after water, as a study system to measure effects of seasonal precipitation variability on crop functional quality and associated farmer knowledge, preferences, and livelihoods. Sampling was conducted in …

Arboretum Annual Report 2013-2014, Glenn Dreyer

Annual Reports

No abstract provided.

Iowa Academy Of Science: The New Bulletin, V10n3, Fall 2014, Iowa Academy Of Science

New Bulletin

Inside This Issue:

--Message from the Executive Director

--Member Only Website Log-in

--ICTM-ISTS Math Science Fall Conference

--New IAS Program Coordinator

--New REAP Grant

--New Academy Website

--Iowa Science Foundation

--Recognizing Excellence

--Events and Deadlines

--Excellence in Science Teaching Award

Multidimensional Approach To Comparative Avian Visual Systems, Bret Alan Moore

Open Access Dissertations

Since the birth of visual ecology, comparative studies on how birds see their world have been limited to a small number of species and tended to focus on a single visual trait. This approach has constrained our ability to understand the diversity and evolution of the avian visual system. The goal of this dissertation was to characterize multiple visual dimensions on bird groups that are highly speciouse (e.g., Passeriformes), and test some hypotheses and predictions, using modern comparative tools, on the relationship between different visual traits and their association with visual information sampling behaviors. First, I developed a novel method …

The Ecology Of Infancy And Early Childhood In Rural Senegal; A Five Year Old Can Boot But Not Foot, An Exploration Of Where Biology Meets Culture, Heather Mills

Independent Study Project (ISP) Collection

This research project explores the life stages of infancy and early childhood in the village of Ndiane in the Thies region of Senegal. I will discuss how biology meets culture to influence children, parenting styles, and expectations of the life stage. How does ecology, the interaction of physical, biological and cultural landscapes, characterize childhood and the intertwined belief systems that influence parenting? The information was gathered using a combination of participant observation and free list interviews.

Rough Hands: Family Conceptions Of Rural Morocco’S Agricultural Labor, A Case Study, Leah Kahler

Independent Study Project (ISP) Collection

Conceptions of success for people in any capitalist context are tangled with social hierarchies of work. The rural women of Morocco have been specifically singled out as the objects discourses about their domestic and agricultural work, agency, gender identity and role, and their use of private and public space ownership. This project will examine the justifications, conceptions, and satisfaction with rural-agricultural work in a small-scale family farm in Morocco’s Al Hoceima province. Using the case study approach, I will live with a family in Sidi Bouafif and work alongside the family for an eight-day fieldwork period. Through participant observation and …

Genetics Of The Pig Tapeworm In Madagascar Reveal A History Of Human Dispersal And Colonization, Tetsuya Yanagida, Jean-François Carod, Yasuhito Sako, Minoru Nakao, Eric P. Hoberg, Akira Ito

Harold W. Manter Laboratory of Parasitology: Faculty Publications

An intricate history of human dispersal and geographic colonization has strongly affected the distribution of human pathogens. The pig tapeworm Taenia solium occurs throughout the world as the causative agent of cysticercosis, one of the most serious neglected tropical diseases. Discrete genetic lineages of T. solium in Asia and Africa/Latin America are geographically disjunct; only in Madagascar are they sympatric. Linguistic, archaeological and genetic evidence has indicated that the people in Madagascar have mixed ancestry from Island Southeast Asia and East Africa. Hence, anthropogenic introduction of the tapeworm from Southeast Asia and Africa had been postulated. This study shows that …

Ethnomedical, Ecological And Phytochemical Studies Of The Palauan Flora, Christopher Kitalong

Dissertations, Theses, and Capstone Projects

There has been a serious deterioration of Palauan culture, language and traditional practices over the last century. To promote health and avoid this deterioration of tradition, ecological, ethnobotanical and phytochemical studies have been carried out on the plant Phaleria nisidai Kaneh. (Thymelaeaceae), "Delal a Kar", Palauan for "Mother of Medicine". This study is the first study that sets the foundations for the development of natural Palauan therapeutics, through validation of ethnomedically significant plants. Validations of these plants is done through documenting Palauan plant ethnomedical data; mapping the distribution of Palauan plants on limestone Rock Islands; and analyzing ethnopharmacological and phytochemical …

The Santa Clara, 2014-09-25, Santa Clara University

The Santa Clara

No abstract provided.

Using The Minority Stress Model To Understand Depression In Lesbian, Gay, Bisexual, And Transgender Individuals In Nebraska, Molly Mccarthy, Christopher M. Fisher, Jay A. Irwin, Jason D. Coleman, Aja D. Kneip Pelster

Sociology and Anthropology Faculty Publications

Previous studies demonstrated the utility of the minority stress model in understanding health disparities for lesbian, gay, bisexual, and transgender (LGBT) populations. Since most research has considered large metropolitan areas, predominantly in coastal regions of the United States, this research focuses on a midwestern state, Nebraska. This study sought to assess the relationships between depressive symptoms experienced by participants (N = 770) and minority stress variables, including experiences with violence, perceptions of discrimination, and respondents’ degree of self-acceptance of their LGBT identity. Regression analysis revealed that after controlling for demographic variables, self-acceptance, and perceived discrimination were correlated with depressive symptoms. …

Annotated Bibliography: Attitudes Toward Animal Research (1998-2013), Erich Yahner

BIBLIOGRAPHIES

No abstract provided.

Park Rangers' Behaviors And Their Effects On Tourists And Tibetan Macaques (Macaca Thibetana) At Mt. Huangshan, China, Rie Usui, Lori K. Sheeran, Jin-Hua Li, Lixing Sun, Xi Wang, Alexander J. Pritchard, Alexander S. Duvall-Lash, R. Steven Wagner

Biology Faculty Scholarship

Previous studies have reported the negative impacts of tourism on nonhuman primates (NHPs) and tourists and advocated the improvement of tourism management, yet what constitutes good quality management remains unclear. We explored whether rates of macaque aggression and self-directed behaviors (SDBs) differed under the supervision of two park ranger teams at the Valley of the Wild Monkeys (VWM) in Mt. Huangshan, Anhui Province, China. The two ranger teams provisioned and managed a group of macaques on an alternating monthly basis. Monkey, tourist and ranger behaviors were collected from August 16–September 30, 2012. Macaque aggression and SDB rates did not differ …

Acceptance Of Evolution By America’S Educators Of Prospective Teachers, Guillermo Paz-Y-Miño-C, Avelina Espinosa

New England Science Public: Series Evolution

Paz-y-Miño-C G & Espinosa A. 2014. Acceptance of Evolution by America’s Educators of Prospective Teachers. New England Science Public: Series Evolution 2(1): 1-92 (ISSN: 2326-0971). In NESP Series Evolution Vol 2 No 1, Paz-y-Miño-C and Espinosa use the conceptual framework of the Incompatibility Hypothesis (i.e. science/evolution and belief in supernatural causation are incompatible) to document the patterns of acceptance of evolution of 495 Educators of Prospective Teachers affiliated with 281 colleges and universities widely distributed in 4 regions, 9 divisions, and 50 states in the United States. These higher-education professionals (65% PhD-, 22% doctorate-holders) were polled in five areas: (i) …

A Homogenizing Process Of Selection Has Maintained An 'Ultra-Slow' Acetylation Nat2 Variant In Humans, Blandine Patillon, Pierre Luisi, Estella S. Poloni, Sotiria Boukouvala, Pierre Darlu, E. Genin, Audrey Sabbagh

Human Biology Open Access Pre-Prints

N-acetyltransferase 2 (NAT2) is an important enzyme involved in the metabolism of a wide spectrum of naturally occurring xenobiotics, including therapeutic drugs and common environmental carcinogens. Extensive polymorphism in NAT2 gives rise to a wide interindividual variation in acetylation capacity which influences individual susceptibility to various drug-induced adverse reactions and cancers. Striking patterns of geographic differentiation have been described for the main slow acetylation variants of the NAT2 gene, suggesting the action of natural selection at this locus. In the present study, we took advantage of the whole-genome sequence data available from the 1000 Genomes project to investigate the …

Hla Class Ii Alleles In The Otomi Population Of The Mezquital Valley. A Genetic Approach To The History Of Interethnic Migrations In The Mexican Central Plateau, Ana Itzel Juárez-Martín, Blanca Zoila González-Sobrino, Ángel Eduardo Camarena Olvera, Ramcés Falfán-Valencia

Human Biology Open Access Pre-Prints

From a historic and genetic point of view, the Otomi of the Mezquital Valley are a frontier people that have played an important role in the making of the population dynamics of the Mexican Central Plateau. Due to their antiquity in the area, the Otomi may be bearers of ancient genetic variability, shared mainly today with other groups belonging to the Otomanguean linguistic family and with the Nahua.

This study analyzes the HLA class II allele frequencies reported in Mexican indigenous populations, in order to provide an intra-regional level historical perspective of the genetic relationships between the Otomi of the …

Anthropomorphism, Anthropectomy, And The Null Hypothesis, Kristin Andrews, Brian Huss

Experimentation Collection

We examine the claim that the methodology of psychology leads to a bias in animal cognition research against attributing ‘‘anthropomorphic’’ properties to animals (Sober in Thinking with animals: new perspectives on anthropomorphism. Columbia University Press, New York, pp 85–99, 2005; de Waal in Philos Top 27:225–280, 1999). This charge is examined in light of a debate on the role of folk psychology between primatologists who emphasize similarities between humans and other apes, and those who emphasize differences. Weargue that while in practice there is sometimes bias, either in the formulation of the null hypothesis or in the preference of Type-II …

Persistence And Stability Of Eastern Afromontane Forests: Evidence From Brevicipitid Frogs, Simon P. Loader, F. Sara Ceccarelli, Michele Menegon, Kim M. Howell, Roman Kassahun, Abebe A. Mengistu, Samy A. Saber, Fikirte Gebresenbet, Rafael O. De Sá, Et Al.

Biology Faculty Publications

Aim: The persistence and stability of habitats through time are considered predictors of high levels of biodiversity in some environments. Long-term habitat persistence and stability may explain the species-rich, endemic forest fauna and flora of the Eastern Afromontane Biodiversity Region (EABR). Using comple- mentary phylogenetic and biogeographical approaches, we examine evolution- ary patterns in EAR brevicipitid frogs. Using these data, we test whether brevicipitid history reflects patterns of long-term forest persistence and/or sta bility across the EABR.

Location: East Africa.

Methods: A dated phylogeny for brevicipitids was constructed using two nuclear and three mitochondrial markers. Alternative diversification modes were used …

Fall 2014

Scientia

CSH progress notes; Alumna entrepreneur finds success at the intersection of chemistry and law; Lions, lycopods and laboratories: CSH students thrive in summer internships; Fielding a team for a mission to Mars; Professor Craig Klugman on the medical humanities; Lab Notes

Population Genetic Structure Of Traditional Populations In The Peruvian Central Andes And Implications For South American Population History, Graciela S. Cabana, Cecil M. Lewis, Jr., Raúl Y. Tito, R. Alan Covey, Angela M. Cáceres, C. Leslie Castillo Pampas, Augusto F. De La Cruz, Diana Durand, Genevieve Housman, Brannon I. Hulsey, Gian Carlo Iannacone, Paul W. Lopez, Rolando Martínez, Ángel Medina, Olimpio Ortega Dávila, Karla Paloma Osorio Pinto, Susan I. Polo Santillán, Percy Rojas Domínguez, Meagan Rubel, Heather F. Smith, Silvia E. Smith, Verónica Rubín De Celis, Beatriz Lizárraga, Anne C. Stone

Human Biology Open Access Pre-Prints

Molecular-based characterizations of Andean peoples are traditionally conducted in the service of elucidating continental-level evolutionary processes in South America. Consequently, “western” Andean population genetic variation is often represented in relation to “eastern” variation among Amazon and Orinoco River Basin populations. This west-east contrast in patterns of population genetic variation is typically attributed to large-scale phenomena, such as dual founder colonization events and/or differing long-term microevolutionary histories. However, alternative explanations that consider the nature and causes of population genetic diversity within the Andean region remain underexplored.

Here we examine population genetic diversity in the Peruvian Central Andes using mtDNA HVI and …

The Genomic Architecture Of Population Divergence Between Subspecies Of The European Rabbit, Miguel Carneiro, Frank W. Albert, Sandra Afonso, Ricardo J. Pereira, Hernan Burbano, Rita Campos, Jose Melo-Ferreira, Jose A. Blanco-Aguiar, Rafael Villafuerte, Michael W. Nachman, Jeffrey M. Good, Nuno Ferrand

Biological Sciences Faculty Publications

The analysis of introgression of genomic regions between divergent populations provides an excellent opportunity to determine the genetic basis of reproductive isolation during the early stages of speciation. However, hybridization and subsequent gene flow must be relatively common in order to localize individual loci that resist introgression. In this study, we used next-generation sequencing to study genome-wide patterns of genetic differentiation between two hybridizing subspecies of rabbits (Oryctolagus cuniculus algirus and O. c. cuniculus) that are known to undergo high rates of gene exchange. Our primary objective was to identify specific genes or genomic regions that have resisted …

Identification Of Snps In The Coding Region Of Human Mtdna, Cassidy Punt, Elizabeth Smalley

Journal of Undergraduate Research at Minnesota State University, Mankato

Two novel single nucleotide polymorphisms (SNPs) were discovered within the coding region of the NADH dehydrogenase subunit 2 gene of mitochondrial DNA (mtDNA). mtDNA is of particular importance in forensic analysis as well as in the study of the origin and dispersal of humans. Two segments of the coding region of human mtDNA, as well as the hyper-variable region 2 (HV 2) were selected and sequenced in order to determine if any previously unknown SNPs were present in our test subjects. Target regions were designed to include known SNPs; appropriate primers were developed using the OLIGO 6 Primer Analysis Software. …

The Ontogeny Of Whistle Production In Infant Atlantic Bottlenose Dolphins (Tursiops Truncatus) During The First Thirty Days Of Life, Brittany Leigh Jones

Master's Theses

The manner in which dolphin calves acquire their whistle repertoire is largely unknown. This paper focuses on whistle development in four bottlenose dolphin calves during the first thirty days of life in order to increase our understanding of the early emergence of whistles and whistle-like vocalizations. The acoustic parameters of whistle-type vocalizations (i.e., whistles and whistlesquawks) that coincided with a bubblestream emission from the focal calf and/or its mother were analyzed, as were the behavioral states of the mother-calf pair during the emission of such vocals. Mother and calf whistle rates are inversely related, with the mother whistling more often …

Facing The Wreck: Death, Optimism, And The Fragmented Form, Rachael Marie Schaffner

Graduate Theses and Dissertations

Walter Benjamin described history as a winged angel who faces backwards, staring perpetually into the past as the violent winds of destiny carry him into the future (Illuminations). Despite a western, post-enlightenment myth of eternal progress, the wreckage of human contributions to history is clearly evident in our 21st-century understanding of anthropogenic impact on global ecology. In the context of these ecological crises (and the resulting political and economic questions), postmodern novels reveal a powerful ability to imagine different ways of living and interacting with the world. This thesis traces the relationship between fragmentation, death, and liminal experiences …

Expression And Functional Characterization Of Mtp Genes From Arabidopsis Thaliana In Saccharomyces Cerevisiae, Yessica E. Cerino

Theses and Dissertations - UTB/UTPA

In this study the functional characterization and overexpression of Metal Tolerance Protein (MTP) cDNA were evaluated using a transgenic yeast (Saccharomyces cerevisiae) model system as a preliminary means for the characterization of metal tolerance conferred by putative Group III MTP genes from Arabidopsis thaliana. Metal disc assays for nickel, zinc, cobalt and cadmium treatments were performed to measure the tolerance imparted to yeast by the MTP cDNAs. Statistical analysis from zinc and cadmium assays showed AtMTP1 imparted the highest zinc tolerance in yeast, while AtMTPB1 imparted the highest cadmium and cobalt tolerance. However, AtMTPA2 and AtMTPB produced a decrease in …

Infrared Thermal Image For Assessing Animal Health And Welfare, Irenilza Alencar Nääs, Rodrigo Garófallo Garcia, Fabiana Ribeiro Caldara

Assessment of Animal Welfare Collection

Infrared thermal imaging is a non-destructive testing technology that can be used to determine the superficial temperature of objects. This technology has an increasing use in detecting diseases and distress in animal husbandry within the poultry, pig and dairy production. The process can identify changes in peripheral blood flow from the resulting changes in heat loss and; therefore, have been a useful tool for evaluating the presence of disease, edema, and stress in animals. This paper reviews the current literature related to the use of infrared technology and discusses their results and implications in animal welfare issues, poultry, pig and …