Digital Commons Network^™

Paleoparasitology And Pathoecology In Russia: Investigations And Perspectives, Sergey Slepchenko, Karl Reinhard

Karl Reinhard Publications

Russia, both as the USSR and the Russian federation, provided a source of parasitological theory for decades. A key figure in Russian parasitology was Yevgeny Pavlovsky. He developed the nidus concept, the conceptual basis for the field of pathoecology. He also coined the term “paleoparasitology.” Pathoecology is a foundation concept in archaeological parasitology. Paleoparasitology, as defined by Pavlovsky, is an avenue for understanding of host parasite evolution over very long time periods. These contributions are not fully recognized internationally. Similarly, the long history of Russian paleontological and archaeological investigations are not fully known. Most recently, discoveries from archaeological sites show …

The Paleoepidemiology Of Enterobius Vermicularis (Nemata: Oxyuridae) Among The Loma San Gabriel At La Cueva De Los Muertos Chiquitos (600–800 Ce), Rio Zape Valley, Durango, Mexico, Johnica J. Morrow, Karl Reinhard

Karl Reinhard Publications

One hundred coprolites excavated from La Cueva de los Muertos Chiquitos (600–800 CE) in the Rio Zape Valley of present-day Durango, Mexico, were examined for the presence of helminth eggs utilizing standard archaeoparasitological techniques. Eggs of the human pinworm (Enterobius vermicularis) were recovered from 34 of the 100 coprolites examined. Eggs of parasites were photographed and measured before egg concentration values were calculated for each positive sample. Egg concentration values demonstrated an overdispersed pattern of distribution among the samples (66% uninfected, 25% less than 100 eggs/g, 8% between 100 and 500 eggs/g, and 1% more than 500 eggs/g). …

Autologous Bone Flap Resorption Years After Subtemporal Craniotomy, John Oladapo Obafunwa, Emily E. Hammerl, David Jaskierny, Livia A. Taylor, Lynette Russell, Karl Reinhard

Karl Reinhard Publications

In Spring of 2012, the partially undressed and skeletonized remains of a homeless adult Hispanic male was found in a fairly open wooded area in Nebraska. The remains showed evidence of extensive pathologies, which included healed traumas and surgeries. Examination of the decedent's medical records revealed that he had a history of kidney and liver problems, alcohol abuse, several traumas including a major head injury that necessitated a craniotomy, and radiological features of neurocysticercosis. The autologous bone flap, which was replaced after the craniotomy, had resorbed significantly away from the edges of the injury. Death was variously attributed to craniocerebral …

Parallel Altitudinal Clines Reveal Trends In Adaptive Evolution Of Genome Size In Zea Mays, Paul Bilinski, Patrice S. Albert, Jeremy J. Berg, James A. Birchler, Mark N. Grote, Anne Lorant, Juvenal Quezada, Kelly Swarts, Jinliang Yang, Jeffrey Ross-Ibarra

Department of Agronomy and Horticulture: Faculty Publications

While the vast majority of genome size variation in plants is due to differences in repetitive sequence, we know little about how selection acts on repeat content in natural populations. Here we investigate parallel changes in intraspecific genome size and repeat content of domesticated maize (Zea mays) landraces and their wild relative teosinte across altitudinal gradients in Mesoamerica and South America. We combine genotyping, low coverage whole-genome sequence data, and flow cytometry to test for evidence of selection on genome size and individual repeat abundance. We find that population structure alone cannot explain the observed variation, implying that …

Framing Contemporary U.S. Wild Horse And Burro Management Processes In A Dynamic Ecological, Sociological, And Political Environment, J. Derek Scasta, Jacob D. Hennig, Jeffrey L. Beck

Human–Wildlife Interactions

The Wild Free-Roaming Horses and Burros Act (WFRHBA) of 1971 established all “unbranded or unclaimed” equids on U.S. public lands as “living symbols of the historic and pioneer spirit of the West.” Today, >72,000 feral horses (Equus ferus caballus) and burros (E . asinus ; WHB) live on western U.S. public rangelands. The number of WHBs exceeds the Bureau of Land Management’s maximum Appropriate Management Level (AML) of 26,715 by a factor of approximately 2.7 and has nearly doubled from 2007–2015. The AML was set to balance WHB numbers with rangeland health and support other uses such as wildlife habitat …

Resource Selection Of Free-Ranging Horses Influenced By Fire In Northern Canada, Sonja E. R. Leverkus, Samuel D. Fuhlendorf, Marten Geertsema, Brady W. Allred, Mark Gregory, Alexandre R. Bevington, David M. Engle, J. Derek Scasta

Human–Wildlife Interactions

Free-ranging or feral horses (Equus ferus caballus) were important to the livelihood of First Nations and indigenous communities in Canada. The early inhabitants of the boreal region of British Columbia (BC) capitalized on naturally occurring wildfires and anthropogenic burning to provide forage for free-ranging horses and manage habitat for wildlife. This form of pyric herbivory, or grazing driven by fi re via the attraction to the palatable vegetation in recently burned areas, is an evolutionary disturbance process that occurs globally. However, its application to manage forage availability for free-ranging horses has not been studied in northern Canada. Across Canada, there …

College Student Alcohol Use And Engagement In Prevention Programming, Alexis H. Branch, Shimona Kumar, Christina Mcgrath

UROP Posters

Social problems and adverse consequences have been associated with risky alcohol use (Paschall et al, 2015). Personalized Normative Feedback (PNF) has been utilized to address these problems (White and Hingson, 2014) by comparing students’ alcohol use to campus or national norms (Butler et al, 2009). The current investigation sought to understand differences in alcohol use behaviors in freshmen who did and did not report completion of a personalized feedback intervention (PFI) in a diverse sample of college students from the Spit for Science (S4S) project. S4S is a campus-wide, longitudinal study on the genetic and environmental factors that contribute to …

Functional Variation In The Mitochondrial Genome Of The Yeast Saccharomyces Cerevisiae, John F. Wolters

Graduate Dissertations and Theses

Mitochondrial haplotypes contribute to functional diversity in natural populations. Uniparental inheritance makes it difficult to characterize the genetic architecture of mitochondrially driven phenotypes. In this work I explored the natural diversity of mitochondrial genomes in the yeast Saccharomyces cerevisiae. Few complete mitochondrial genomes were available for S. cerevisiae owing to challenges in high-throughput sequencing. I developed sequencing strategies using new technologies to generate complete high quality yeast mitochondrial genomes. Comparisons of 100 complete yeast mitochondrial genomes demonstrated extensive variation between populations in coding sequences and variable introns.

I demonstrated that these mitochondrial variants directly caused growth differences in strains with …

Effects Of Texting On Neck Muscle Activity And Neck Flexion In College Students., Matalgah Haneen

Honors Theses

College students are susceptible to tech neck, a possible musculoskeletal disorder producing neck strain due to texting. The primary aim of this study was to determine whether texting among college students produces any significant effects on the trapezius and sternocleidomastoid muscles and neck flexion. To the best ofmy knowledge, no study in the literature has studies the effects of texting taking into consideration factors specific to college students, such as carrying a backpack and different environments (e.g. stairs, hallways). This justifies my primary aim of examining collegiate factors (i.e. backpack, environment) influence on neck muscle activity and flexion in students …

Forest Type Influences Population Densities Of Nocturnal Lemurs In Manompana, Northeastern Madagascar, Alex Miller, Harriet R. Mills, Tantely Ralantoharijaona, Nicole A. Volasoa, Chantal Misandeau, Lounès Chikhi, Roberta Bencini, Jordi Salmona

Research outputs 2014 to 2021

Forest loss, fragmentation, and anthropization threaten the survival of forest species all over the world. Shifting agriculture is one of these threatening processes in Madagascar. However, when its cycle is halted and the land is left to regenerate, the resulting growth of secondary forest may provide a viable habitat for folivorous and omnivorous lemur species. We aimed to identify the response of nocturnal lemurs to different successional stages of regenerating secondary, degraded mature, and mature forest across a mosaic-type landscape. We surveyed four nocturnal lemur species (Avahi laniger, Microcebus cf. simmonsi, Allocebus trichotis, and Daubentonia madagascariensis) in four forest types …

Spatial Distribution And Dietary Niche Breadth Of The Leopard Panthera Pardus (Carnivora: Felidae) In The Northeastern Himalayan Region Of Pakistan, Faraz Akrim, Tariq Mahmood, Muhammad Sajid Nadeem, Shaista Andleeb, Siddiqa Qasim

Turkish Journal of Zoology

Knowledge of a predato's diet is important for understanding its ecology and for predicting its influence on the dynamics of prey populations. We investigated the spatial distribution and diet composition of the leopard (Panthera pardus) in the northeastern Himalayan region of Pakistan. We used molecular scatology technique to identify scats of common leopard collected from the field. The leopard was recorded at 30 different surveyed sites with an elevational range between 757-1891 m a.s.l. Its diet comprised 17 prey species, including both wild and domestic prey. Frequency of occurrence of wild prey was approximately 35% of the total leopard diet, …

Influences Of Forest Edges And Human Activities On The Dry Season Ranging Patterns Of Chimpanzees (Pan Troglodytes Schweinfurthii) In Nyungwe National Park, Rwanda, Enathe Hasabwamariya

Antioch University Dissertations & Theses

Great apes, our closest biological relatives are threatened globally by the increasing anthropogenic pressures on their habitat. The major threats to the eastern chimpanzees (Pan troglodytes schweinfurthii) are hunting for bush meat and illegal trade in chimpanzee infants, habitat loss or fragmentation and disease transmission (IUCN, 2010). Nyungwe National Park (NNP), Rwanda has a population of chimpanzees that face several threats, including hunting for bushmeat, habitat degradation from forest fires and human-wildlife conflicts, and much of these impacts are concentrated at forest edges. The main objectives of this research were to assess the use of forest edges by chimpanzees along …

Evaluating Elasmobranch Bycatch And Shark Depredation In The Georgia Shrimp Fishery, Matthew M. Scanlon

College of Graduate Studies: Theses & Dissertations

The Georgia shrimp fishery has seen a dramatic decrease in profit and productivity since the 1980’s due to a number of economic factors. Additional, yet undocumented, pressures on this fishery include interactions between foraging sharks with trawl gear. Fishermen report that sharks frequently bite nets in an attempt to prey on netted fish, resulting in large holes in the gear. Further elasmobranch interactions with trawl gear occur as bycatch; shrimp trawls represent nearly 100% of elasmobranch commercial bycatch in Georgia state waters, the species composition of which is largely unstudied. Shark interactions with nets were detailed through fishery-dependent observations on …

Why Do We Want To Think Humans Are Different?, Colin A. Chapman, Michael A. Huffman

Animal Sentience

One harmful consequence of creating categories where one group is unique and superior to others is that it justifies committing negative, often atrocious, acts on the members of the inferior group. Correcting divisive human categorizations (racial superiority, gender superiority) has bettered society. Scholars have often claimed that humans are unique and superior to nonhuman animals. These claims need to be reevaluated. Many have already been refuted. Animals have been shown to outperform humans in many tasks, including cognitive ones. Here we raise the question: Has the false sense of superiority been used to justify human cruelty to animals?

Crispr Genetic Editing: Paths For Christian Acceptance And Analysis Of In Vivo And In Vitro Efficiency, Mandeep Sandhu

Scripps Senior Theses

With advancements in CRISPR-cas9 broadening the potential paths for clinical usage of genetic editing, conversations about genetic editing have grown to outside simply scientific communities and into mainstream conversations. This study focuses specifically on Christian discourse of genetic editing and locates four major tensions for many Christians when they think about genetic editing: beginning of life, Creator-human relationship, imago Dei, and stewardship. With these major concerns in mind, I identify epigenetics, somatic cell genetic editing, and in vivo genetic editing research as important research paths to pursue as they can potentially produce techniques that more Christian individuals would feel comfortable …

Analysing Intonation Of The Pied Butcherbird, Jean-Michel Maujean

Theses : Honours

Native to Australia, the Pied Butcherbird has been extensively studied and transcribed by previous composers, notably including Olivier Messiaen. This may be due to richness and diversity in each bird’s repertoire, along with parallels drawn from Western Tonality. Hollis Taylor has conducted extensive study in this field, notably with an analysis of a transcription made by Messiaen, that was incorporated in his piece Éclairs sur l'au- delà (1988-91). Coupled with the original field recording, Taylor’s analysis and Messiaen’s score, this study will reanalyse the original recording from which Messiaen made his transcription.

Zoomusicology is a practice that represents the …

Evaluating Nubian Population Structure From Cranial Nonmetric Traits: Gene Flow, Genetic Drift, And Population History Of The Nubian Nile Valle, Kanya Godde, Richard L. Jantz

Human Biology Open Access Pre-Prints

Paleolithic archaeological and skeletal remains from the Nile Valley have yielded a complex picture of life along the river. Sociocultural and sociopolitical events during this timeframe shaped population structure, while gene flow and genetic drift further developed it. In this paper, we take a population genetics approach to modeling Nubian biological relationships in an effort to describe how an accumulation of events formed Nubian population structure. A variety of Nubian samples were utilized, spanning the Mesolithic-Christian time periods, and geographically, from just above the first through the third cataracts. Population genetics statistics were employed to estimate and depict biological affinities …

Fake Or Not: Two Prerequisites For Jealousy, Juliane Bräuer, Federica Amici

Animal Sentience

Cook and colleagues (2018) use a novel approach to test jealousy in dogs. Although such a non-invasive approach is more than welcome in comparative research, several methodological shortcomings limit the impact of this study. We briefly outline two main problems. (1) There is no evidence that the fake dogs in the study were perceived as real, and thus as social rivals, which would be a prerequisite for jealousy. (2) It is questionable whether dogs generally show the cognitive prerequisites for jealousy, such as attentiveness toward a social rival, the ability to understand intentions, and a sense of fairness. We suggest …

"Squeezed Between The Gunshots And The Gentrifiers”: Urban Agriculture In Philadelphia's Kensington Neighborhood, Arianna Hall-Reinhard

Graduate Theses, Dissertations, and Problem Reports (ETD)

Urban agriculture (UA) is part of the broader alternative food movement and a potential avenue through which to “do” food justice work. UA projects in the urban Global North are frequently motivated by social and food justice goals. Despite these guiding ideals, UA projects in America are rife with internal contradictions, including those related to racial inequalities, complex gentrification dynamics, and funding realities. In this paper, I employ the conceptual frameworks of food justice and urban political ecology to consider how gentrification and UA project funding structures affect five specific UA projects in Philadelphia’s Kensington neighborhood. While the loss of …

Taphonomic Considerations On Pinworm Prevalence In Three Ancestral Puebloan Latrines, Morgana Camacho, Alena M. Iñiguez, Karl Reinhard

Karl Reinhard Publications

For archaeological studies it is always necessary to consider taphonomic factors that could have influenced in ancient material preservation. Parasite eggs are usually highly degraded in ancient sites dated from all periods of time and taphonomic factors are mentioned to explain absence and low quantity of eggs found. In this study, we compare parasite egg recovery of three Great House latrines: two from Aztec Ruins (Rooms 219 and 225) and one from Salmon Ruins. We compared through statistical regression the recovery of eggs with the abundance of two classes of decomposers: mites and nematodes. These microorganisms have relation with nematode …

New Evidence Of Ancient Parasitism Among Late Archaic And Ancestral Puebloan Residents Of Chaco Canyon, Rachel E. Paseka, Carrie C. Heitman, Karl Reinhard

Karl Reinhard Publications

Archaeoparasitology provides a unique perspective on the health and habits of ancient cultures through the identification of parasite remains in archaeological materials. We identified eggs of the human whipworm, Trichuris trichiura, in coprolites recovered from Late Archaic (1926–1751 cal. BCE) and Ancestral Puebloan (1039–1163 cal. CE) sites in Chaco Canyon, New Mexico. Our findings represent the earliest record of T. trichiura in North America, the first record of the species from Chaco Canyon, and the first record of a macroparasite from a Late Archaic site (Atlatl Cave) on the Colorado Plateau. T. trichiura is common in the …

Science At Engineer Cantonment, Hugh H. Genoways, Brett C. Ratcliffe, Carl R. Falk, Thomas E. Labedz, Paul R. Picha, John R. Bozell

University of Nebraska State Museum: Mammalogy Papers

Conclusions

It is our contention that Thomas Say, Titian Peale, Edwin James, and their colleagues of the Stephen Long Expedition of 1819–1820 were heavily engaged in scientific research, which took the form of the first biodiversity inventory undertaken in the United States. This accomplishment has been overlooked both by biologists and historians, but it should rank among the most significant accomplishments of the expedition. The results of this inventory continue to inform us today about environmental, faunal, and floral changes along the Missouri River in an area that is known to be an ecotone between the deciduous forests of the …

Historical Observations And Identifications Of Plants And Animals In The Vicinity Of Engineer Cantonment In 1819-1820, Hugh H. Genoways, Brett C. Ratcliffe, Carl R. Falk, John R. Bozell

University of Nebraska State Museum: Mammalogy Papers

Historical observations and identifications of plants and animals in the vicinity of Engineer Cantonment in 1819–1820 (James 1822) are shown below in Roman and Roman italic print. Specimens identified through phytoarcheological and zooarcheological analysis of materials and believed to be reasonably associated or contemporaneous with the Long Expedition use of the site (AU4) are shown in boldface. Species present in both the historical and archeological data are marked by an asterisk (*). References used in this compilation include Benedict (1996), Brewer (1970 [1840]), Conant and Collins (1991), Ducey (2000), Evans (1997), Falk et al. (this volume), Genoways et al. (2008), …

Chemical Composition Of Glandular Secretions From A Pair-Living Monogamous Primate: Sex, Age, And Gland Differences In Captive And Wild Owl Monkeys (Aotus Spp.), Andrea Spence-Aizenberg, Bruce A. Kimball, Lawrence E. Williams, Eduardo Fernandez-Duque

United States Department of Agriculture Wildlife Services: Staff Publications

Broadening our knowledge of olfactory communication in strictly monogamous systems can inform our understanding of how chemosignals may facilitate social and reproductive behavior between the sexes. Compared to other social and mating systems, relatively little is known about olfactory communication in strictly monogamous non-human primates. Furthermore, platyrrhines are not well represented in chemical analyses of glandular secretions. We conducted semi-quantitative headspace gas chromatography with mass spectrometry to investigate the chemical components of glandular secretions from the subcaudal and pectoral glands of a strictly pair-living platyrrhine, the owl monkey (Aotus spp.). In this study, the first chemical analysis of a …

Invasive Rats (Rattus Sp.), But Not Always Mice (Mus Musculus), Are Ubiquitous At All Elevations And Habitats Within The Caribbean National Forest, Puerto Rico, Aaron B. Shiels, Gabriela E. Ramirez De Arellano

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive rodents, particularly rats (Rattus spp.), occupy >80% of the world’s islands and are among the greatest threats to native biodiversity and agriculture on islands. At the time of their introduction in the 1500s, there was at least 1 native rat species in Puerto Rico. Today there are no native rodents remaining in Puerto Rico, but R. norvegicus (Norway Rat) may be found in urban settings, and R. rattus (Black Rat) are the most common rat across the island including within natural areas, and invasive Mus musculus (House Mouse) may also be found in urban and non-urban habitats. The …

Description Of Phyllium (Phyllium) Conlei, New Species, And A First Look At The Phylliidae (Phasmatodea) Of The Lesser Sunda Islands, Indonesia, Royce T. Cumming, Pablo Valero Riquelme, Sierra N. Teemsma

Insecta Mundi

The Phylliidae (Phasmatodea) diversity of the Lesser Sunda Islands, Indonesia is preliminarily examined, and revealed to be notably lacking in completeness with only two species currently recorded. Of the nine islands/ island groups within the Lesser Sunda Islands, only the westerly islands (Bali and Lombok) have single species recorded: Phyllium (Pulchriphyllium) pulchrifolium Audinet-Serville, 1838, from Bali, and Phyllium (Phyllium) conlei Cumming, Valero, and Teemsma, new species, from Lombok. The latter species is herein described and differentiated from congenerics. To conclude, with so few species recorded from the Lesser Sunda Islands, a key to species for Java and the Lesser …

Use Of An Alternative Natural Weed Suppressant: Effects Of Parboiled Rice Hull Mulch On The Growth Of Container Weeds, Amy R. Fields-Taylor, Vanessa Slinger-Friedman

The Kennesaw Journal of Undergraduate Research

The Chattahoochee Nature Center (CNC) is one of the leading educational centers in Georgia about the ecology of the Chattahoochee River. Due to lack of man power, keeping down the weeds in the CNC plant nursery is one of those tasks that often gets left undone. The nursery becomes overgrown with invasive weed species. Understandably, they must sometimes resort to the use of herbicides, such as Roundup®, to keep the hundreds of native and endangered species of plants housed at CNC from being choked out by invasive weeds. This study tests the ability to suppress weed growth by use of …

Infanticide In Chimpanzees: Taphonomic Case Studies From Gombe, Claire A. Kirchhoff, Michael L. Wison, Deus C. Mjungu, Jane Raphael, Shadrack Kamenya, D. Anthony Collins

Biological Sciences Faculty Research and Publications

Objectives

We present a study of skeletal damage to four chimpanzee (Pan troglodytes) infanticide victims from Gombe National Park, Tanzania. Skeletal analysis may provide insight into the adaptive significance of infanticide by examining whether nutritional benefits sufficiently explain infanticidal behavior. The nutritional hypothesis would be supported if bone survivorship rates and skeletal damage patterns are comparable to those of monkey prey. If not, other explanations, such as the resource competition hypothesis, should be considered.

Methods

Taphonomic assessment of two chimpanzee infants included description of breakage and surface modification, data on MNE, %MNE, and bone survivorship. Two additional infants …

Science And Sentiment: Affecting Change In Environmental Awareness, Attitudes, And Actions Through The Daily Nature Project, Elizabeth D. Haynes Poronsky

The Transdisciplinary STEAM+ Journal

Knowledge about what motivates pro-environmental behavior is important to organizations that seek to encourage environmental stewardship. Research suggests that targeting emotions and beliefs about nature can be more effective in changing environmental actions than increasing knowledge. Daily Nature, a site on the social media platform Facebook, features a daily nature photograph, a quote from a notable historical person and a related lyrical written passage. The popularity of this site lends credence to the appeal of interdisciplinary formats, and underscores the benefits of encouraging emotional and aesthetic ties to nature.

Seasonal Resource Selection And Habitat Treatment Use By A Fringe Population Of Greater Sage-Grouse, Rhett Boswell

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Movement and habitat selection by Greater Sage-grouse (Centrocercus uropasianus) is of great interest to wildlife managers tasked with applying conservation measures for this iconic western species. Current technology has created small and lightweight GPS (Global Positioning Systems) transmitters that can be attached to sage-grouse. Using GIS software and statistical programs such as Program R, land managers can analyze GPS location data to assess how sage-grouse are geospatially interacting with their habitats. Within the Panguitch Sage-Grouse Management Area (SGMA) thousands of acres of land have been restored or manipulated to enhance sage-grouse habitat; this usually involves removal of pinyon pine …