Digital Commons Network^™

Quantifying Spatial Resilience, Craig R. Allen, David G. Angeler, Graeme S. Cumming, Carl Folke, Dirac L. Twidwell, Daniel R. Uden

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

1. Anthropogenic stressors affect the ecosystems upon which humanity relies. In some cases when resilience is exceeded, relatively small linear changes in stressors can cause relatively abrupt and nonlinear changes in ecosystems.

2. Ecological regime shifts occur when resilience is exceeded and ecosystems enter a new local equilibrium that differs in its structure and function from the previous state. Ecological resilience, the amount of disturbance that a system can withstand before it shifts into an alternative stability domain, is an important framework for understanding and managing ecological systems subject to collapse and reorganization.

3. Recently, interest in the influence of …

Biological Invasions, Ecological Resilience And Adaptive Governance, Brian C. Chaffin, Ahjond S. Garmestani, David G. Angeler, Dustin L. Herrmann, Craig A. Stow, Magnus Nystrom, Jan Sendzimir, Matthew E. Hopton, Jurek Kolasa, Craig R. Allen

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

In a world of increasing interconnections in global trade as well as rapid change in climate and land cover, the accelerating introduction and spread of invasive species is a critical concern due to associated negative social and ecological impacts, both real and perceived. Much of the societal response to invasive species to date has been associated with negative economic consequences of invasions. This response has shaped a war-like approach to addressing invasions, one with an agenda of eradications and intense ecological restoration efforts towards prior or more desirable ecological regimes. This trajectory often ignores the concept of ecological resilience and …

Avoiding Decline: Fostering Resilience And Sustainability In Midsize Cities, Craig R. Allen, Hannah E. Birge, Shannon L. Bartelt-Hunt, Rebecca Bevans, Jessica L. Burnett, Barbara A. Cosens, Ximing Cai, Ahjond S. Garmestani, Igor Linkov, Elizabeth A. Scott, Mark D. Solomon, Daniel R. Uden

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Eighty-five percent of United States citizens live in urban areas. However, research surrounding the resilience and sustainability of complex urban systems focuses largely on coastal megacities (>1 million people). Midsize cities differ from their larger counterparts due to tight urban-rural feedbacks with their immediate natural environments that result from heavy reliance and close management of local ecosystem services. They also may be less path-dependent than larger cities due to shorter average connection length among system components, contributing to higher responsiveness among social, infrastructural, and ecological feedbacks. These distinct midsize city features call for a framework that organizes information and …

Identification Of Putative Geographically Isolated Wetlands Of The Conterminous United States, Charles R. Lane, Ellen D'Amico

United States Environmental Protection Agency: Publications

Geographically isolated wetlands (GIWs) are wetlands completely surrounded by uplands. While common throughout the United States (U.S.), there have heretofore been no nationally available, spatially explicit estimates of GIW extent, complicating efforts to understand the myriad biogeochemical, hydrological, and habitat functions of GIWs and hampering conservation and management efforts at local, state, and national scales. We used a 10-m geospatial buffer as a proxy for hydrological or ecological connectivity of National Wetlands Inventory palustrine and lacustrine wetland systems to nationally mapped and available stream, river, and lake data. We identified over 8.3 million putative GIWs across the conterminous U.S., encompassing …

Water Consumption Estimates Of The Biodiesel Process In The Us, Qingshi Tu, Mingming Lu, Y. Jeffrey Yang, Don Scott

United States Environmental Protection Agency: Publications

As a renewable alternative to petroleum diesel, biodiesel has been widely used in the US and the world. However, its potential impact on water resources has not been much evaluated. This study investigates water consumption from the biodiesel process, which includes three stages: soybean irrigation, soybean-to-soybean oil processing, and biodiesel manufacturing, at both national and state levels. Mass-based allocation is performed and water consumption at the three stages is obtained on the basis of million gallons per year and gallon water per gallon biodiesel (gal/gal). The normalized water consumption (water intensity) of the irrigation, oil processing, and biodiesel production stages …

Quantitative Structure–Mesothelioma Potency Model Optimization For Complex Mixtures Of Elongated Particles In Rat Pleura: A Retrospective Study, Philip M. Cook, Joseph Swintek, Timothy D. Dawson, David Chapman, Mathew A. Etterson, Dale Hoff

United States Environmental Protection Agency: Publications

Cancer potencies of mineral and synthetic elongated particle mixtures, including asbestos fibers, are influenced by changes in fiber dose composition, bioavailability, and biodurability in combination with relevant cytotoxic dose-response relationships. An extensive rat intrapleural dose characterization data set with a wide variety of elongated particles physicochemical properties facilitated statistical analyses of pleural mesothelioma response data combined from several studies for evaluation of alternative dose-response models. Utilizing logistic regression of individual elongated particle dimensional variations within each test sample, four major findings emerged: (1) Mild acid leaching provides superior prediction of tumor incidence compared to samples that were not leached; (2) …

Gross And Microscopic Lesions In Corals From Micronesia, T. M. Work, G. S. Aeby, K. A. Hughen

United States Geological Survey: Staff Publications

The authors documented gross and microscopic morphology of lesions in corals on 7 islands spanning western, southern, and eastern Micronesia, sampling 76 colonies comprising 30 species of corals among 18 genera, with Acropora, Porites, and Montipora dominating. Tissue loss comprised the majority of gross lesions sampled (41%), followed by discoloration (30%) and growth anomaly (29%). Of 31 cases of tissue loss, most lesions were subacute (48%), followed by acute and chronic (26% each). Of 23 samples with discoloration, most were dark discoloration (40%), with bleaching and other discoloration each constituting 30%. Of 22 growth anomalies, umbonate growth anomalies composed …

A Personal Perspective On Searching For The Ivory-Billed Woodpecker: A 41-Year Quest, Paul W. Sykes Jr.

United States Geological Survey: Staff Publications

I first learned about the Patuxent Wildlife Research Center (Patuxent) in Laurel, MD, while attending high school in the mid-1950s. Patuxent wildlife biologists Brooke Meanley, Chandler (Chan) S. Robbins, and Robert (Bob) E. Stewart, Sr., visited me at my parents’ home in Norfolk, VA. I was the compiler of the Norfolk County Christmas Bird Count (which included the eastern portion of the Virginia sector of the Dismal Swamp). As part of that count, we had for several years been estimating populations of red-winged blackbirds (Agelaius phoeniceus) and common grackles (Quiscalus quiscula) in the millions. Patuxent was …

Patuxent’S Role In The Development Of The North American Breeding Bird Survey, John R. Sauer

United States Geological Survey: Staff Publications

The North American Breeding Bird Survey (BBS) is a roadside survey of the breeding birds of North America. The BBS provides data from the contiguous United States, Alaska, southern and central Canada, and northern Mexico. Begun in 1966 by Chandler (Chan) S. Robbins at the U.S. Geological Survey (USGS) Patuxent Wildlife Research Center (Patuxent), and now jointly managed by Patuxent, the Canadian Wildlife Service, and the Mexican Commission for the Knowledge and Use of Biodiversity, the survey is conducted primarily in June along more than 5,000 roadside survey routes that are surveyed once each year. Volunteer observers drive the 39.4-kilometer …

Patuxent’S Long-Term Research On Wolves, David L. Mech

United States Geological Survey: Staff Publications

The gray wolf (Canis lupus) was one of the first species placed on the Endangered Species List in 1967. The Endangered Species Act of 1973 legally protected the wolf along with other listed species. Patuxent Wildlife Research Center (Patuxent) in Laurel, MD, began its Endangered Wildlife Program in 1966, and U.S. Fish and Wildlife Service (USFWS) biologist Ray Erickson was assigned to lead it. In 1973, I was transferred to the program from Region 3 of the USFWS, having been employed there since 1969 to study wolves in Minnesota. Endangered Species Act protection of the wolf fostered its …

Phosphorus Retention In A Lowland Neotropical Stream Following An Eight-Year Enrichment Experiment, Gaston E. Small, Marcelo Ardón, John H. Duff, Alan P. Jackman, Alonso Ramírez, Frank J. Triska, Catherine M. Pringle

United States Geological Survey: Staff Publications

Human alteration of the global P cycle has led to widespread P loading in freshwater ecosystems. Much research has been devoted to the capacity of wetlands and lakes to serve as long-term sinks for P inputs from the watershed, but we know much less about the potential of headwater streams to serve in this role. We assessed storage and retention of P in biotic and abiotic compartments after an 8-y experimental P addition to a 1st-order stream in a Neotropical wet forest. Sediment P extractions indicated that nearly all P storage was in the form of Fe- and Al-bound P …

Water Current, Volume 48, No. 1, Winter 2016

Water Current Newsletter

2016 tour to Colorado’s South Platte basin June 14-16

Research, awards, speaking engagements, new staff position

Uptake Of Nanoparticles By Vibrio Gazogenes, Shonda Renee Jones

Theses and Dissertations

Vibrio gazogenes, a Gram-negative species of marine bacteria, was capable of transporting 20 nm (diameter) surface-carboxylated, polystyrene, fluorescent FluoSpheres® microspheres (excitation/emission = 505/515) through the outer membrane, which was indicated by a detectable decrease in the fluorescence intensity of the nanoparticles in the culture medium. A mechanism of transport was investigated involving the ATP-binding cassette (ABC) protein transporters that traverse the outer membrane. Inhibition of the ABC transporters did not prevent the entry of the nanoparticles into the cell, suggesting there was an alternate mechanism of transport. The addition of nanoparticles to the culture medium also did not provide any …

Development Of A Dreissena Bioassay To Assess The Toxicity Of Contaminants Across Two Life-History Stages, Caroline Joyce Addis

Wayne State University Theses

Dreissenid mussels (Dreissena polymorpha and D. bugensis) have rapidly become widespread and ubiquitous in North America since their introduction into the Great Lakes in the 1980s. The resulting environmental and economic impacts of their invasion have been extensive, negatively affecting biodiversity and costing millions of dollars in control efforts and damage to power generation and water treatment facilities. Although dreissenids are often associated with negative impacts, they may present a practical tool for toxicology studies. The typically sessile behavior of the benthic adults coupled with the planktonic nature of the veligers allow for a more complete evaluation of water quality …

Integration Of Deterministic And Stochastic Models In A 1,4-Dioxane Contaminated Glacial Aquifer System, Washtenaw County, Michigan, Lena Kristin Pappas

Wayne State University Theses

Hybrid models incorporating stochastic variability within a deterministic hydrostratigraphic framework provide an effective way to assess uncertainty in flow and transport model predictions. This study evaluated the distribution of groundwater flow and contaminant transport pathways in two ensembles of spatially variable hydraulic conductivity (K) distributions. The models comprised a 360 ft-thick sequence of Pleistocene glacial sediments in in an approximately 8 mi2 area across Washtenaw County, Michigan. Conditioned K fields were generated using Sequential Gaussian Simulation (SGS) and Sequential Indicator Simulation (SIS) constructed using indicator classes based on natural gamma ray logs from 77 monitoring wells. K fields were modeled …

Understanding The Structure And Functioning Of Polar Pelagic Ecosystems To Predict The Impacts Of Change, E. E. Murphy, R. D. Cavanagh, K. F. Drinkwater, S. M. Grant, J. J. Heymans, E. E. Hofmann, G. L. Hunt Jr., N. M. Johnston

CCPO Publications

The determinants of the structure, functioning and resilience of pelagic ecosystems across most of the polar regions are not well known. Improved understanding is essential for assessing the value of biodiversity and predicting the effects of change (including in biodiversity) on these ecosystems and the services they maintain. Here we focus on the trophic interactions that underpin ecosystem structure, developing comparative analyses of how polar pelagic food webs vary in relation to the environment. We highlight that there is not a singular, generic Arctic or Antarctic pelagic food web, and, although there are characteristic pathways of energy flow dominated by …

Wetlands And Coastal Systems: Protecting And Restoring Valuable Ecosystems, Carmen T. Agouridis, Kyle R. Douglas-Mankin, Anna C. Linhoss, Aaron R. Mittelstet

Biosystems and Agricultural Engineering Faculty Publications

Wetlands and coastal systems are unique, highly productive, and often threatened landscapes that provide a host of services to both humans and the environment. This article introduces a five-article Wetlands and Coastal Systems Special Collection that evolved from a featured session at the 2015 ASABE Annual International Meeting in New Orleans, Louisiana. The Collection provides perspectives on tools and techniques for enhancing the protection and restoration of wetlands and coastal systems with emphasis on vegetation, hydrology, water quality, and planning. Topics span the Florida Everglades (two articles) and Virginia floodplain (one article) wetland systems and include remote sensing (one article) …

Effects Of Chemical Amendments To Swine Manure On Runoff Quality, Elizabeth L. Bullock, Dwayne R. Edwards, Phillip A. Moore Jr., Richard S. Gates

Biosystems and Agricultural Engineering Faculty Publications

Land-applied swine manure can be an environmental concern when runoff losses of manure constituents occur. The use of chemical amendments to mitigate these losses has been investigated for poultry litter, but materials such as swine manure have received less attention in this context, particularly at the plot scale or larger. The objective of this experiment was to evaluate the impacts of aluminum sulfate (alum; Al₂(SO₄)₃), aluminum chloride (AlCl₃), and ferric chloride (FeCl₃) addition on runoff of selected constituents of land-applied swine manure. Manure was collected from feeder pigs fed a …

The Roles Of Introduced Eucalyptus In The Conservation And Expansion Of Ethiopian Orthodox Church Forests In The Northern Ethiopian Highlands, Janice Liang

Honors Theses

Species of the genus Eucalyptus (common name eucalyptus) are widely planted all across Ethiopia – including on large areas of land previously allocated to food production. In recent decades eucalyptus has also increasingly been planted on lands around and within “church forests,” sacred groves of old-aged Afromontane trees surrounding Ethiopian Orthodox Tewahido churches. These revered holy sites have long been recognized for their cultural values and also for their ecosystem services – including their potential to support species conservation and restoration, as church forests are some of the only remaining sanctuaries for many of Ethiopia’s indigenous and endemic plant and …

Ecology Of Two Reintroduced Black Bear Populations In The Central Appalachians, Sean Mccarthy Murphy

Theses and Dissertations--Animal and Food Sciences

Reintroduced populations are vulnerable to demographic and environmental stochasticity, deleterious genetic effects, and reduced population fitness, all of which can increase extinction probability. Population viability is principle to determining the status of reintroduced populations and for guiding management decisions. To attempt to reestablish black bear (Ursus americanus) populations in the central Appalachians, two reintroductions using small founder groups occurred during the 1990s in the Big South Fork area along the Kentucky-Tennessee border (BSF) and in the Jefferson National Forest along the Kentucky-Virginia border (KVP). My objectives were to estimate demographic and genetic parameters, and to evaluate long-term viability …

The Role Of Microbial Exopolymers In Determining The Fate Of Oil And Chemical Dispersants In The Ocean, Antonietta Quigg, Uta Passow, Wei-Chun Chin, Chen Xu, Shawn Doyle, Laura Bretherton, Manoj Kamalanathan, Alicia K. Williams, Jason B. Sylvan, Zoe V. Finkel, Anthony H. Knap, Kathleen A. Schwehr, Saijin Zhang, Luni Sun, Terry L. Wade, Wassim Obeid, Patrick G. Hatcher, Peter H. Santschi

Chemistry & Biochemistry Faculty Publications

The production of extracellular polymeric substances (EPS) by planktonic microbes can influence the fate of oil and chemical dispersants in the ocean through emulsification, degradation, dispersion, aggregation, and/or sedimentation. In turn, microbial community structure and function, including the production and character of EPS, is influenced by the concentration and chemical composition of oil and chemical dispersants. For example, the production of marine oil snow and its sedimentation and flocculent accumulation to the seafloor were observed on an expansive scale after the Deepwater Horizon oil spill in the Northern Gulf of Mexico in 2010, but little is known about the underlying …

Assessing The Cost Of Global Biodiversity And Conservation Knowledge, Diego Juffe-Bignoli, Thomas M. Brooks, Stuart H. M. Butchart, Richard B. Jenkins, Kaia Boe, Michael Hoffman, Ariadne Angulo, Steve Bachman, Monica Böhm, Neil Brummitt, Kent E. Carpenter

Biological Sciences Faculty Publications

Knowledge products comprise assessments of authoritative information supported by standards, governance, quality control, data, tools, and capacity building mechanisms. Considerable resources are dedicated to developing and maintaining knowledge products for biodiversity conservation, and they are widely used to inform policy and advise decision makers and practitioners. However, the financial cost of delivering this information is largely undocumented. We evaluated the costs and funding sources for developing and maintaining four global biodiversity and conservation knowledge products: The IUCN Red List of Threatened Species, the IUCN Red List of Ecosystems, Protected Planet, and the World Database of Key Biodiversity Areas. These are …

Powerlessness Repurposed: The Feminist Ethos Of Judy Bonds, Mary Beth Pennington

English Faculty Publications

No abstract provided.

Habitat Selection In Transformed Landscapes And The Role Of Novel Ecosystems For Native Species Persistence, Lina Maria Sanchez Clavijo

Electronic Theses and Dissertations

To understand native species persistence in transformed landscapes we must evaluate how individual behaviors interact with landscape structure through ecological processes such as habitat selection. Rapid, widespread landscape transformation may lead to a mismatch between habitat preference and quality, a phenomenon known as ecological traps that can have negative outcomes for populations. I applied this framework to the study of birds inhabiting landscapes dominated by forest remnants and shade coffee plantations, a tropical agroforestry system that retains important portions of native biodiversity. I used two different approaches to answer the question: What is the role of habitat selection in the …

Stochastic Models Of Evidence Accumulation In Changing Environments, Alan Veliz-Cuba, Zachary P. Kilpatrick, Krešimir Josić

Mathematics Faculty Publications

Organisms and ecological groups accumulate evidence to make decisions. Classic experiments and theoretical studies have explored this process when the correct choice is fixed during each trial. However, we live in a constantly changing world. What effect does such impermanence have on classical results about decision making? To address this question we use sequential analysis to derive a tractable model of evidence accumulation when the correct option changes in time. Our analysis shows that ideal observers discount prior evidence at a rate determined by the volatility of the environment, and the dynamics of evidence accumulation is governed by the information …

University Of North Florida Environmental Center Annual Report 2016, Natalie Sassine, Tiffany Torres, James W. Taylor, Maria Mark

Annual Reports

2016 Annual Report of the Environmental Center at the University of North Florida

Effects Of Hydrology On The Growth And Recruitment Of Stream Fish In The Eastern Broadleaf Province Of Minnesota, Eric J. Krumm

All Graduate Theses, Dissertations, and Other Capstone Projects

Agricultural practices and urban development have altered streamflows within the Eastern Broadleaf Province of Minnesota. Stream-flow alteration can produce significant changes in native freshwater communities. Therefore, knowledge of streamflow effects on representative freshwater populations and communities within the province are needed to maintain ecological integrity. Fish community and population dynamics often display predictable responses to flow regimes, which can make fishes model organisms for examining flow-ecology relationships.

In lotic systems, annual variation in streamflow can influence the annual growth and recruitment of fishes. Understanding the growth and recruitment of fish populations is essential for management and conservation efforts. Growth can …

Development And Evaluation Of A Habitat Suitability Model For White-Tailed Deer In An Agricultural Landscape, Eric Anstedt

All Graduate Theses, Dissertations, and Other Capstone Projects

White-tailed deer (Odocoileus virginianus) are an ecological, economical, and socially significant species that occupy a variety of ecoregions. White-tailed deer are mobile habitat generalists that prefer habitats containing woody cover. Deer have successfully adapted to habitat-fragmented, agricultural landscapes. As a result, deer are not uniformly distributed across intensively cultivated areas, which make field surveys difficult with often highly variable spatial data. To increase sampling efficiency (deer observed / sampling effort), the landscape can be stratified based upon preferred habitat types. Habitat suitability models (HSI) have been used to represent hypothesized wildlife-habitat relationships, and therefore the likelihood of deer being observed …

Early Detection Of Mountain Pine Beetle Damage In Ponderosa Pine Forests Of The Black Hills Using Hyperspectral And Worldview-2 Data, Kyle Edward Mullen

All Graduate Theses, Dissertations, and Other Capstone Projects

A leading cause for mortality in the pine forests of western North America, the mountain pine beetle, has impacted over 400,000 acres of ponderosa pine forest in the Black Hills of South Dakota since 1996. Methods aimed at earlier detection, prior to visual manifestation of a mountain pine beetle damage in the tree crown, have not been successful because of the overlap and variability of spectral response between the initial stages of attack (green-attacked) and non-attacked tree crowns. Needle-level reflectance spectra was measured from green-attack and non-attack ponderosa pine trees in early spring following an infestation and analyzed using a …

Uno Website Biology Uno Nature Preserves, Uno Department Of Biology

Student Support

Glacier Creek Preserve and T.L. Davis Preserve are managed by the Department of Biology to restore and preserve some of eastern Nebraska's natural prairie and woodland heritage. These preserves serve as education and research sites for the region as well as sites for those interested in enjoying the feel of our natural heritage.