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Carbon Dioxide, Methane, And Nitrous Oxide Fluxes From Managed Aquatic Systems Of The Rio Grande Valley, Siena Rose Stassi

Theses and Dissertations

Greenhouse gas (GHG) dynamics from small-scale inland water remain relatively understudied, with knowledge gaps across ecosystem types and regions. In South Texas, there is a unique system of managed distributaries and their associated ox-bow lakes, commonly known as resacas. Most resacas are artificially managed and considered novel ecosystems, yet their GHG dynamics are unknown. Two resaca systems were monitored throughout one year to understand the magnitude, temporal variation, and environmental drivers of diffusive fluxes of carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O), along with ebullitive CH4 emissions. Emissions of both CO2 and CH4 peaked in hot summer months, …

Spatio-Temporal Pattern Of Nutrient Dynamics In The South Texas Coastal Watershed, Mohammad Sadman Alam

Theses and Dissertations

Eutrophication threatens aquatic ecosystems by altering productivity through excessive nutrient inputs. In some systems, primary productivity is limited by nitrogen (N), phosphorus (P), or both, based on the N:P ratio defined by the "Redfield" ratio. South Texas, facing rapid urban growth and industrialization, is at risk of higher nutrient loads, but research on nutrient dynamics in this region is limited. This study investigates nutrient variations in the freshwater (FW) abandoned distributaries of the Rio Grande and hypersaline saltwater (SW) systems. Results showed a significant decrease in dissolved inorganic nitrogen (DIN) and an increase in dissolved inorganic phosphorus (DIP), shifting the …

Climate Prediction As An Adaptive Force-Multiplier: Reasons For Hope In A Rapidly Changing World, Matthew D. Laplante

All Graduate Theses and Dissertations, Fall 2023 to Present

It's not unreasonable to feel pessimistic about our future under climate change. But "believing the science" doesn't require you to accept that we are headed toward apocalypse. It is true that human-caused climate change is real, it is underway, and our societies face many increased risks because of it. But that's just part of what climate science tells us about our future world. This same field is responsible for the recent and rapid development of tools and techniques that permit the identification of patterns in our oceans and atmosphere that will aid us in making increasingly accurate predictions about climate—the …

Novel Methods For Assessing And Prioritizing Road-Stream Crossings For Aquatic Organism Passage, Lesley E. Twiner

All Theses

Anthropogenic barriers such as dams and culverts have led to riverine habitat fragmentation and decreased fish diversity worldwide. Low-head structures such as culverts are far more abundant than large dams and may have a larger cumulative impact on river connectivity. Many efforts to inventory road crossing barriers and prioritize removal and restoration efforts do not consider temporal variation in flow. We used cameras to gain continuous water level monitoring data to quantify the relationship between precipitation events and outlet drop height. In the spring of 2024, we selected 25 culvert sites in upstate South Carolina and set up cameras to …

Effects Of Environmentally Relevant Concentrations Of Roundup On Oxidative-Nitrative Stress, Cellular Apoptosis, Prooxidant-Antioxidant Homeostasis, Renin And Cyp1a Expressions In Goldfish: Molecular Mechanisms Underlying Kidney Damage During Roundup Exposure, Md Imran Noor, Md Saydur Rahman

School of Earth, Environmental, & Marine Sciences Faculty Publications

Roundup is one of the most widely used glyphosate-based harmful herbicides in the United States as well as globally, which poses a severe risk for terrestrial and aquatic organisms. In order to identify the detrimental effects of Roundup exposure in aquatic organisms, we investigated the environmentally relevant concentrations of Roundup exposure (low dose: 0.5 μg/L and high dose: 5.0 μg/L for 2 weeks) on renin expression, oxidative-nitrative stress biomarkers (e.g., 2,4-dinitrophenol, DNP; and 3-nitrotyrosine protein, NTP), prooxidant-antioxidant enzymes expressions (e.g., superoxide dismutase, SOD; and catalase, CAT), cellular apoptosis, and cytochrome P450 1A (CYP1A) mRNA levels in the kidneys of goldfish …

Microplastics In Coastal And Marine Environments: A Critical Issue Of Plastic Pollution On Marine Organisms, Seafood Contaminations, And Human Health Implications, Rebecca Muñiz, Md. Saydur Rahman

School of Earth, Environmental, & Marine Sciences Faculty Publications

Plastic has quickly become one of the world's most prevalent environmental pollutants. Population growth has only amplified the demand, resulting in 430 million tons of plastic produced annually, with 11 million tons ending up in our oceans. Without intentional intervention, plastic waste in the oceans is expected to triple, posing severe risks for the aquatic ecosystems, animals, and humans dependent on these waters. As plastic accumulates in oceans and other water environments, the non-biodegradable particles break down into micro- and nano-plastics, invading coastal and marine organisms and causing considerable physiological and morphological damage. This is especially concerning for the millions …

More Concerns About Atmospheric Methane Removal Efforts, Joshua Luczak

Research Collection College of Integrative Studies

The National Oceanic and Atmospheric Administration reported record-high global atmospheric carbon dioxide levels (419.3 ppm) in 2023, alongside atmospheric methane levels (1922.6 ppb) now over 160% above pre-industrial levels. The World Meteorological Organization predicts 2024 could surpass 2023 as the warmest year on record, with more frequent and severe extreme weather events. Meeting the Paris Climate goal of limiting global warming to well below 2°C—or ideally 1.5°C—above pre-industrial levels is becoming increasingly difficult. To address these challenges, efforts are expanding beyond reducing greenhouse gas emissions. While carbon dioxide removal (CDR) technologies have been the focus, attention is now turning to …

Controls On Nutrient And Sediment Export In A Non-Perennial Agricultural Stream, Kathleen Cutting

Graduate Theses and Dissertations

Climate change is expected to increase flow variability and intermittency in streams, changing the magnitude and timing nutrient and sediment delivery. This may exacerbate water quality issues in agricultural landscapes, where nutrient and sediment inputs are often elevated. Elevated nutrients can drive eutrophication in downstream waterways, and excess sediment loss can decrease primary productivity. Non-perennial headwater streams are particularly vulnerable to the impacts of climate change and agriculture as they serve as key sites for nutrient cycling at the terrestrial-aquatic interface. Despite their importance, the interactive effects of agriculture and stream intermittency, as well as unpaved roads in rural watersheds …

Quantifying The Effects Of Urbanization On Stream Nutrient Loads And Decomposition, Caroline Anscombe

Graduate Theses and Dissertations

Urban stream syndrome (USS) refers to the common symptoms of degradation in urban streams globally. Two symptoms of USS are increased nutrient and salt concentrations in streams, affecting ecosystem structure and function. Excess nutrients negatively impact freshwater ecosystems, placing downstream habitats at risk of eutrophication and harmful algal blooms. Excess salt runoff, derived from road salt application, is toxic to freshwater organisms and affects leaf litter decomposition, the base of aquatic food webs. Here, I aimed to quantify the effects of nutrient pollution and salinization on urban water quality and ecosystem function. Despite the widespread consequences of nutrient pollution, most …

A Comprehensive Review Of Carbon Sequestration And Its Assessment Techniques Using Remote Sensing And Geospatial Methods, Imen Ben Salem

All Works

Global warming has elevated carbon sequestration as a critical strategy for mitigating climate change, while enhancing sustainability in productivity. Agricultural land use systems contribute substantially to CO2 emissions due to crop residues, shifting cultivation practices, low-biomass crops, land degradation, and deforestation. The significant rise in CO2 emissions over the past thirty years is associated with burning fossil fuels, leading to substantial environmental changes, including global warming. Remote sensing (RS) and Geographic Information Systems (GIS) are advanced geospatial technologies that facilitate the rapid evaluation of terrestrial carbon stock over extensive regions. An integrated RS-GIS approach for carbon stock estimation and precision …

Harnessing Edna Metabarcoding To Monitor Species Diversity In Restoration Sites: Insights From Laikipia, Kenya, Cornelius Okello, Nina Wambiji, Susana W. Kihia, Nehemiah Ongeso, Samuel Mwakisha Mwamburi, Anthony Wandera, Marie Estelle Demory, Margaret Awuor Owuor

All Peer-Reviewed Publications

Restoration of degraded arid and semi-arid lands (ASALs) dryland ecosystems gained traction globally with the enactment of the Bonn Challenge and UN Decade of Restoration. This has been domesticated in Kenya's context by The Forest and Landscape Restoration Implementation Plan (FOLAREP). However, effectively monitoring restored ecosystems is crucial but challenging because of data gaps and technical hurdles, highlighting the need for innovative approaches to assess and restore biodiversity. This study aimed to pilot soil environmental DNA (eDNA) metabarcoding to detect species compositions rapidly, evaluate population structures and abundances, and characterize taxonomic groups. The results from this study serve as a …

Thermal Performance Drifts Between The Egg Parasitoid Telenomus Remus And The Fall Armyworm May Threaten The Efficacy Of Biological Control Under Climate Change, Macdonald Mubayiwa, Honest Machekano, Brighton M. Mvumi, Winnifred A. Opio, Bame Segaiso, Frank Chidawanyika, Casper Nyamukondiwa

All Peer-Reviewed Publications

The fall armyworm, Spodoptera frugiperda J.E. Smith, is a significant global agricultural pest known for its rapid invasion and devastating impact on crops. While pesticides may be effective for controlling the pest in the short-term, they cause several socioeconomic and ecological costs that highlight the need for more sustainable management strategies. Telenomus remus (Nixon) is a promising egg parasitoid for its biological control. For the parasitoid to provide effective ecosystem services, it should be able to survive and coexist within the same ecological niches as its host. However, there is limited information regarding the potential responses of T. remus to …

Potamogeton Crispus Invasion: Impacts On Native Aquatic Plants And Associated Faunal Habitat, Meghan-Grace Slocombe

All Graduate Theses and Dissertations, Fall 2023 to Present

Aquatic invasive plants are non-native plants that invade a water body and displace native aquatic plants. Invasion depletes the native plant community's ability to provide ecosystem services, including improved water quality, decreased problematic algae, and increased animal habitat. The loss of these ecosystem services reduces the value of fishing, boating, and swimming opportunities in aquatic ecosystems. The potential changes in plant communities and services are particularly important at sites targeted for restoration because project goals typically include increasing ecosystem services, including wildlife habitat. Curly-leaf pondweed (Potamogeton crispus L.) is a problematic invasive species in North America. To better manage …

Managing For Disturbance: Trade-Offs Associated With Population Resilience And Ecosystem Size, Ellie Wallace

All Graduate Theses and Dissertations, Fall 2023 to Present

Populations can recover from and withstand disturbance through characteristics such as reproduction and maintaining large abundances. While these traits are beneficial to native species conservation, they can simultaneously challenge effective invasive species management. Effective invasive species control requires sufficient efforts to overcome a population's ability to recover from disturbance, such as harvest. My dissertation aimed to address how the size of an invasive population and its ability to recover from disturbance impact a suite of invasive species control methods, including those that (1) target mainly larger and older individuals (i.e., mechanical removal), (2) target all sizes of individuals (i.e., targeted …

Assessing Relationships Between Water Quality, Precipitation, Land Cover And Stormwater Conveyance Type Across A Range Of Sub-Watersheds In The Southeastern Coastal Zone, Kevencia Sabine Gabriel Faton

Theses and Dissertations

The expansion of urban land use/cover along the coast may degrade water quality by introducing a plethora of pollutants and pathogens that negatively impact human and ecological health. It is hypothesized that anthropogenic contaminants associated with stormwater runoff increase with increasing urban density and vary with the timing and magnitude of rainfall. In this study, we examined land use/cover change and relationships between Escherichia coli (E. coli), turbidity, nutrients, and the timing and magnitude of rainfall in two different types of stormwater conveyances (ditches and ponds) within Murrells Inlet, SC during the summer of 2023. Our results indicate …

The Effects Of Climate Change On The Advancement Of West Nile Virus, Mackenzie R. Epperson

ATU Scholars Symposium

The West Nile virus (WNV) first emerged in the United States in the year 1999 within the state of New York and has become endemic throughout the country over time. This virus is contracted from an avian species acting as the reservoir host, by the vector species which are mosquitoes. From this point, the mosquitoes transmit the virus to humans and other mammals, which are the dead end hosts. The WNV often presents itself as flu-like symptoms, but in serious cases can cause severe arboviral neurological disease. Since this is an arbovirus, it is important to have the ability to …

From The Ground Up: Community-Based Participatory Research Reclaiming The Science Of Lead, Juan Manuel Rubio, Bavisha Kaylan, Anthony Diaz, Patricia Flores, Maya Cheav, David C. Bañuelas, Ashley Green, Annika Hjelmstad, Ariane Jong-Levinger, Tim Schütz, Maya Carrasquillo, Alana M. W. Lebron, Jun Wu

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

For decades, the dominant approach to lead poisoning has been to focus on homes affected by lead paint and to treat children who are already suffering from lead poisoning. This individualizing approach developed in the context of the defunding and deregulation of government agencies in the 1980s. In recent years, however, community–academic partnerships have reframed lead as an environmental issue produced by the development of the lead industry in the twentieth century and connected to overlapping histories of exploitation, discrimination, and inaction. These community-based projects have contributed to shifting research agendas (by emphasizing historical analysis and the study of the …

Quantifying And Characterizing Microplastics In The Greater Philadelphia Region, Emily Lybashev

Biology Honors Papers

Plastic is one of the world's most useful and versatile materials, so it is no wonder that 400 million tons are produced yearly. When exposed to weathering, heat, water, and organisms, plastic degrades and produces microplastics. These microplastics have managed to leach into our oceans, local waterways, bodies, and even our atmosphere. The negative implications of microplastic contamination in our environment are slowly being uncovered with concerns of toxin buildup. Additionally, the amount of microplastics we are exposed to through local waterways is rarely quantified. Though microplastic research is picking up pace, the Schuylkill River which spans the Greater Philadelphia …

Mine Closure Planning Must Face The Challenge Of Delivering Nature Positive Outcomes, Luis E. Sanchez, Angus Morrison-Saunders

Research outputs 2022 to 2026

The need to address and reverse global biodiversity decline is imperative across all of society including the practices of mine closure planning. Nature Positive is the latest global biodiversity-focused initiative which calls for at least 30% of biodiversity to be enhanced through effective restoration relative to the 2020 baseline. This paper conceptualizes and explains what is necessary in mine closure planning and implementation to meaningfully contribute to this and other nature-positive goals, with some illustrative examples. Issues considered include application of the mitigation hierarchy, rehabilitation in mining and the time lag challenge for restoring biodiversity, biodiversity offsetting, conserving nature while …

Diversity And Habitat Use Of Bats In Modified Suburban Landscapes, Brittany Morgera

Biology Presentations

Bats occupy critical ecological niches and perform important ecosystem services like controlling insect populations. However, humans have altered bat habitat substantially, resulting in the reduction of bat populations. The goals of this research are to assess bat diversity and habitat use across different levels of suburban habitat modification. To accomplish this, we deployed passive acoustic recorders at twelve locations with varying human impact in Montgomery County, Pennsylvania. In accordance with The North American Bat Monitoring Program’s standards, acoustic analysis software was used to identify bat species. Manual identification methods from The Canadian Wildlife Health Cooperative were used to verify these …

Volume 16, Maggie Duncan, Madeline Little, Alicia Hoffman, Megan Livesay, Gabrielle Quaresma, Serenity Allen, Laina Pfountz, Ainslie Allred, Sabrina Robles, Nicholas J. Duellman, Trinity L. Deguzman, Melissa H. Savage, Margaret Dudley, Jocelyn Escobar, Olivia Hildreth, Olivia Hopkins, Benjamin Gettier, Lee Kassay, Jade Riddle, Ashley Seiders

Incite: The Journal of Undergraduate Scholarship

Introduction Dr. Amorette Barber, Director, Office of Student Research

From the Editor Dr. Hannah Dudley-Shotwell

Artist’s Statement Maggie Duncan

On Mentoring Dr. Lee Millar Bidwell

The Hujum Campaign in Uzbekistan and its Consequences by Madeline Little

Wet Cupping Compared to Dry Needling for Treatment of Patients with Low Back Pain: A Critically Appraised Topic by Alicia Hoffman and Megan Livesay

Optimization of eDNA Air Sampling Via 3D Printed Fan by Gabrielle Quaresma

Beyond the Classroom: A Qualitative Study of Teacher Attrition and Retention by Serenity Allen and Laina Pfountz

The Treatment of Subacromial Impingement Syndrome with Platelet-Rich plasma Injections Verses …

Examining The Effects Of Symbiotic State And Environmental Pollution On Wound Healing In Coral, Jonathan De Montagnac

College Honors Program

Understanding coral reef health requires comprehension of the biological processes that support live coral cover. Corals are frequently exposed to physical abrasion from various sources, thereby necessitating vital resources be directed towards wound recovery. For corals and other organisms that harbor photosynthetic symbionts, the balance between autotrophic versus heterotrophic energy contributions influences their fitness. Experimentally disentangling the individual effects of environmental stress and symbiotic state on coral health is difficult in most tropical corals due to the obligate nature of their symbiosis. However, determining how nutritional dynamics, environmental stressors, and health interact is crucial to understanding coral resilience. To examine …

Trenching And Compost Sustain Grain Yield Increases Over Nine Years On Deep Sands But At A Cost, David J.M. Hall, Tom J. Edwards

Grain and Other Field Crops Research Articles

Context. Crops grown on deep sands on the south coast of WA are limited by soil physical and chemical properties including compaction and poor nutrition. Aims. Crops grown on deep sands on the south coast of Western Australia are limited by soil physical and chemical properties including compaction and poor nutrition. Our aim was to determine what effects deep-placed organic amendments have on soil properties and crop production in a deep sand and whether such amendments are profitable. Methods. A long-term field trial was conducted over nine years (2015–2023) to investigate soil amendments including lime (0 and …

Advancing Aerial Survey Techniques For Non-Breeding Waterfowl Populations: A Comprehensive Review And Application In Northeastern Louisiana, Victoria L. Drake

LSU Master's Theses

Aerial surveys play a crucial role in monitoring North America's waterfowl populations and habitat conditions, and consistency across geographies and years allows biologists to track trends through time. The goal of this project was to redesign the northeastern portion of the Louisiana wintering waterfowl survey to align with statistically robust transect surveys conducted in neighboring states within the Mississippi Alluvial Valley. To identify the optimal sampling method, we evaluated three transect weighting schemes: stratified random (unweighted), stratified by watershed, and stratified by expert opinion. Approximately 10% of the total sampling area was randomly selected for each survey period, adhering to …

Global Ocean Bottom Temperature Observation Design: Observing System Simulation Experiments For Strategic Deployment Of Smart Subsea Cables, Karen E. Renninger-Rojas

LSU Master's Theses

Deep-ocean observations below 2000 meters remain limited, restricting our ability to model global ocean processes critical to climate prediction. This thesis evaluates the potential of SMART (Science Monitoring and Reliable Telecommunications) subsea cables to address these observational gaps by conducting Observing System Simulation Experiments (OSSEs) and adjoint sensitivity analyses using the MITgcm ocean model and ECCO outputs.

Vertical decorrelation analysis showed that temperature and salinity in key regions decouple from the upper ocean beyond 2000 m. Over 60% of the proposed SMART cable sites exhibited decorrelation depths exceeding Argo’s maximum sampling depth, highlighting their strategic value for deployment.

A comparison …

From Food To Fashion: Bio-Based Textiles Advancing Sustainability And Socioeconomic Growth In Emerging Markets, Andrew Burnstine

Faculty and Staff Publications & Presentations

The global fashion industry is undergoing a profound shift towards sustainability, driven by innovations in bio-based textiles derived from agricultural byproducts such as cactus, pineapple, banana, coconut, fungi, and bacterial cultures. This article comprehensively explores the technological advancements, industry adoption trends, socioeconomic impact on emerging markets, and barriers to widespread adoption of bio-based textiles. The alignment of these innovations with global sustainability initiatives, key industry collaborations, and policy interventions are also examined.

Development Of Isoscapes For Hong Kong Freshwater Streams As A Basis For Ecological Studies, Hon Tim Yip

Lingnan Theses (MPhil & PhD)

Applications of isoscapes in terrestrial and marine ecosystems have grown notably as a tool for studying animal movement. However, isoscapes are rarely used in freshwater ecosystem because current iterations of isoscapes commonly model baseline distributions of bulk stable isotope analysis (SIA) data, which may be inadequate for providing the necessary resolution for fine spatial scale stream environments. This issue could potentially be addressed using compound specific stable isotope analysis, a new method that measures the isotopic composition of individual compounds to provide more comprehensive information than bulk SIA. My study focuses on δ¹³C of essential amino acids (EAA-δ …

Comparing Thermal Imaging Of New York City From 1988 To 2025, Amelia R. Slaton

Scholars Week

My project compared the urban heat island effect on New York City from 1988 to 2025. After looking at the risks associated with the heat island effect on local life I compared Landsat 5 imaging from 1988 and 1989 to Landsat 9 imaging from 2025 to find any differences between the thermal output of New York City. I then used images from both inner and long island area of New York from both time periods. As well as, the reason for New York's large thermal output compared to other surrounding areas and what the city is doing to combat the …

Depth Patterns Of Redear Sunfish Lepomis Microlophus In Kentucky Lake, Justin Graben

Scholars Week

Redear Sunfish Lepomis microlophus are a highly sought sportfish known for their size potential, but their ecological behavior in large reservoirs remain poorly understood. In this study, we looked at how Redear Sunfish Lepomis microlophus move vertically in Kentucky Lake. We used acoustic tags with depth sensors to measure the movement of Redear Sunfish both diurnally and seasonally within Kentucky Lake.

During the day, Redear Sunfish occupied significantly deeper waters compared to dawn, dusk, and night (p < 0.0001.). Many fish, including the species in the Lepomis genus, may have a preference for specific light levels for optimal foraging and predation avoidance, even if predation is not the primary concern at larger sizes. This daily pattern was consistent through most seasons, except on average the fish were deeper during the winter season (p < 0.0001).

Understanding the movement patterns of Redear Sunfish is essential for effective species management, especially as their popularity grows and they potentially compete with …

Discovery Of Suitable Habitat For Freshwater Mussel Species In The Appomattox River Through The Use Of Environmental Dna., Nicholas Duellman

Longwood Senior Thesis Proposal

Freshwater mussels are a keystone species providing crucial ecosystem services and river composition resiliency. Anecdotal evidence suggests the presence of freshwater mussels within the Appomattox river, the specifics of population sizes and suitable habitat remains an open question. Environmental DNA (eDNA) usage in conservation ecology has exploded in use within the past two decades, being far less invasive and cost-demanding than traditional methods. An eDNA metabarcoding pipeline of the 16s mitochondrial ribosomal subunit was built in R v. 4.4.2, using dada2 v. 3.2.1 package to trim MinION single read ASV outputs for freshwater mussel species identification in the interest of …