Digital Commons Network^™

Effects Of Elevated Temperature On 8-Ohdg Expression In The American Oyster (Crassostrea Virginica): Induction Of Oxidative Stress Biomarkers, Cellular Apoptosis, Dna Damage And Γh2ax Signaling Pathways, Md Faizur Rahman, Mohammad Maruf Billah, Richard Kline, Md Saydur Rahman

School of Earth, Environmental, & Marine Sciences Faculty Publications

Global temperature is increasing due to anthropogenic activities and the effects of elevated temperature on DNA lesions are not well documented in marine organisms. The American oyster (Crassostrea virginica, an edible and commercially important marine mollusk) is an ideal shellfish species to study oxidative DNA lesions during heat stress. In this study, we examined the effects of elevated temperatures (24, 28, and 32 °C for one-week exposure) on heat shock protein-70 (HSP70, a biomarker of heat stress), 8-hydroxy-2’-deoxyguanosine (8-OHdG, a biomarker of pro-mutagenic DNA lesion), double-stranded DNA (dsDNA), γ-histone family member X (γH2AX, a molecular biomarker of DNA damage), …

Gut Microbial Communities Of Hybridising Pygmy Angelfishes Reflect Species Boundaries, Megan J. Huggett, Jean-Paul A. Hobbs, Federico Vitelli, Michael Stat, Tane H. Sinclair-Taylor, Michael Bunce, Joseph D. Dibattista

Research outputs 2022 to 2026

Hybridisation and introgression of eukaryotic genomes can generate new species or subsume existing ones, with direct and indirect consequences for biodiversity. An understudied component of these evolutionary forces is their potentially rapid effect on host gut microbiomes, and whether these pliable microcosms may serve as early biological indicators of speciation. We address this hypothesis in a field study of angelfishes (genus Centropyge), which have one of the highest prevalence of hybridisation within coral reef fish. In our study region of the Eastern Indian Ocean, the parent fish species and their hybrids cohabit and display no differences in their diet, behaviour, …

Vegetated Coastal Ecosystems In The Southwestern Atlantic Ocean Are An Unexploited Opportunity For Climate Change Mitigation, Vanessa Hatje, Margareth Copertino, Vinicius F. Patire, Ximena Ovando, Josiah Ogbuka, Beverly J. Johnson, Hilary Kennedy, Pere Masque, Joel C. Creed

Research outputs 2022 to 2026

Vegetated coastal ecosystems (mangroves, seagrasses, and saltmarshes, often called Blue Carbon ecosystems) store large carbon stocks. However, their regional carbon inventories, sequestration rates, and potential as natural climate change mitigation strategies are poorly constrained. Here, we systematically review organic carbon storage and accumulation rates in vegetated coastal ecosystems across the Central and Southwestern Atlantic, extending from Guyana (08.28°N) to Argentina (55.14°S). We estimate that 0.4 Pg organic carbon is stored in the region, which is approximately 2-5% of global carbon stores in coastal vegetated systems, and that they accumulate 0.5 to 3.9 Tg carbon annually. By ecosystem type, mangroves have …

Global Dataset Of Soil Organic Carbon In Tidal Marshes, Tania L. Maxwell, André S. Rovai, Maria F. Adame, Janine B. Adams, José Álvarez-Rogel, William E. N. Austin, Kim Beasy, Francesco Boscutti, Michael E. Böttcher, Tjeerd J. Bouma, Richard H. Bulmer, Annette Burden, Shannon A. Burke, Saritta Camacho, Doongar R. Chaudhary, Gail L. Chmura, Margareth Copertino, Grace M. Cott, Christopher Craft, John Day, Carmen B. De Los Santos, Lionel Denis, Weixin Ding, Joanna C. Ellison, Carolyn J. E. Lewis, Luise Giani, Maria Gispert, Swanne Gontharet, José A. González-Pérez, M. Nazaret González-Alcaraz, Connor Gorham, Anna E. L. Graversen, Anthony Grey, Roberta Guerra, Qiang He, James R. Holmquist, Alice R. Jones, José A. Juanes, Brian P. Kelleher, Karen E. Kohfeld, Dorte Krause-Jensen, Anna Lafratta, Paul S. Lavery, Edward A. Laws, Carmen Leiva-Dueñas, Pei S. Loh, Catherine E. Lovelock, Carolyn J. Lundquist, Peter I. Macreadie, Inés Mazarrasa, J. Patrick Megonigal, Joao M. Neto, Juliana Nogueira, Michael J. Osland, Jordi F. Pagès, Nipuni Perera, Eva-Maria Pfeiffer, Thomas Pollmann, Jacqueline L. Raw, María Recio, Ana C. Ruiz-Fernández, Sophie K. Russell, John M. Rybczyk, Marek Sammul, Christian Sanders, Rui Santos, Oscar Serrano, Matthias Siewert, Craig Smeaton, Zhaoliang Song, Carmen Trasar-Cepeda, Robert R. Twilley, Marijn Van De Broek, Stefano Vitti, Livia V. Antisari, Baptiste Voltz, Christy N. Wails, Raymond D. Ward, Melissa Ward, Jaxine Wolfe, Renmin Yang, Sebastian Zubrzycki, Emily Landis, Lindsey Smart, Mark Spalding, Thomas A. Worthington

Research outputs 2022 to 2026

Tidal marshes store large amounts of organic carbon in their soils. Field data quantifying soil organic carbon (SOC) stocks provide an important resource for researchers, natural resource managers, and policy-makers working towards the protection, restoration, and valuation of these ecosystems. We collated a global dataset of tidal marsh soil organic carbon (MarSOC) from 99 studies that includes location, soil depth, site name, dry bulk density, SOC, and/or soil organic matter (SOM). The MarSOC dataset includes 17,454 data points from 2,329 unique locations, and 29 countries. We generated a general transfer function for the conversion of SOM to SOC. Using this …

Substantial Blue Carbon Sequestration In The World’S Largest Seagrass Meadow, Chuancheng Fu, Sofia Frappi, Michelle N. Havlik, Wells Howe, S. David Harris, Elisa Laiolo, Austin J. Gallagher, Pere Masqué, Carlos M. Duarte

Research outputs 2022 to 2026

Seagrass meadows are important sinks for organic carbon and provide co-benefits. However, data on the organic carbon stock in seagrass sediments are scarce for many regions, particularly The Bahamas, which accounts for up to 40.7% of the documented global seagrass area, limiting formulation of blue carbon strategies. Here, we sampled 10 seagrass meadows across an extensive island chain in The Bahamas. We estimate that Bahamas seagrass meadows store 0.42–0.59 Pg organic carbon in the top-meter sediments with an accumulation rate of 2.1–2.9 Tg annually, representing a substantial global blue carbon hotspot. Autochthonous organic carbon in sediments decreased from ~1980 onwards, …

How Beavers (Castor Canadensis) Affect Habitat Availability For Two Native Oregon Turtles: Actinemys Marmorata And Chrysemys Picta Bellii, Rodé Krige

University Honors Theses

Oregon is home to two native freshwater turtle species: the northwestern pond turtle and the western painted turtle. Both turtles are Oregon conservation strategy species with a status rating of sensitive, indicating declining populations. Oregon's decline in these turtle's populations is thought to be predominantly due to loss and degradation of habitat that results from development and urbanization. Beavers' ability to dam streams and create ponds may be creating habitat usable by turtles, but the relationship is under-studied. This study assessed water temperature, basking habitat, and overall turtle habitat suitability at beaver-dammed and control ponds in Portland, Oregon. Average basking …

The Effects Of Salt Marsh Restoration On The Hydrology Of Salt Marsh Channels, Isis Kontas

University Honors Theses

Salt marshes produce many ecosystem services, from water purification to protection from hurricanes. Despite their benefits, salt marshes have been impacted negatively by human activities. There are many salt marsh restoration projects that intend to bring back all ecological functions and services. Quantifiable measurements are needed to evaluate the effectiveness of such restoration efforts. Earlier work by Reagan Thomas demonstrated what happens to the hydrology of salt marsh channels when they are adjacent to restored salt marshes. This study builds on Thomas’ work and uses the sinuosity of channels as a quantitative, representative metric of salt marsh hydrology restoration effectiveness. …

Multi-Scale Mapping Of Australia’S Terrestrial And Blue Carbon Stocks And Their Continental And Bioregional Drivers, Lewis Walden, Oscar Serrano, Mingxi Zhang, Zefang Shen, James Z. Sippo, Lauren T. Bennett, Damien T. Maher, Catherine E. Lovelock, Peter I. Macreadie, Connor Gorham, Anna Lafratta, Paul S. Lavery, Luke Mosley, Gloria M. S. Reithmaier, Jeffrey J. Kelleway, Sabine Dittmann, Fernanda Adame, Carlos M. Duarte, John B. Gallagher, Pawel Waryszak, Paul Carnell, Sabine Kasel, Nina Hinko-Najera, Rakib Hassan, Madeline Goddard, Alice R. Jones, Raphael A. Viscarra Rossel

Research outputs 2022 to 2026

The soil in terrestrial and coastal blue carbon ecosystems is an important carbon sink. National carbon inventories require accurate assessments of soil carbon in these ecosystems to aid conservation, preservation, and nature-based climate change mitigation strategies. Here we harmonise measurements from Australia’s terrestrial and blue carbon ecosystems and apply multi-scale machine learning to derive spatially explicit estimates of soil carbon stocks and the environmental drivers of variation. We find that climate and vegetation are the primary drivers of variation at the continental scale, while ecosystem type, terrain, clay content, mineralogy and nutrients drive subregional variations. We estimate that in the …

Through The Lens Of A Naturalist: How Learning About Nature Promotes Nature Connectedness Via Awe, Shu Tian Ng, Angela K. Y. Leung, Sarah Hian May Chan

Research Collection School of Social Sciences

Environmental educators stress the importance of engaging with the wonders of the Earth in promoting nature connectedness. However, it remains unclear if learning about nature has an incremental effect beyond mere exposure to nature and what psychological mechanism can explain such a learning effect if it exists. To fill this gap, we propose a mediation model in which learning about nature promotes a sense of awe—a self-transcendent emotion associated with the recognition of vastness in nature. A sense of awe, in turn, promotes nature connectedness. Study 1 employed a cross-sectional survey and offered preliminary support for the proposed model, with …

The Staying Power Of Asbestos Hazards: A Critical Environmental Justice Case Analysis, Emily Qian

Sociology Between the Gaps: Forgotten and Neglected Topics

No abstract provided.

Effect Of Different Pre-Growth Temperatures On The Survival Kinetics Of Salmonella Enterica And Listeria Monocytogenes In Fresh-Cut Salad During Refrigerated Storage, Avninder Kaur, Veerachandra K. Yemmireddy

School of Earth, Environmental, & Marine Sciences Faculty Publications

The effect of the pre-growth temperature of bacterial cultures on their subsequent survival kinetics in fresh-cut produce during refrigerated storage was investigated in this study. Three-strain cocktails of Listeria monocytogenes and Salmonella enterica, cultured at different growth temperatures (4, 21, and 37 °C) were inoculated on fresh-cut mixed salad and on individual produce in the mixed salad. The inoculated samples were stored at 4 °C and 80 ± 2% relative humidity (RH) for up to 72 h and the growth, survival, or death kinetics were determined at regular intervals. The results indicate that depending upon the type of pathogen …

Solar Radiation Modification Governance In The Context Of Temperature Overshoot, Janos Pasztor

New England Journal of Public Policy

As the climate crisis escalates, governments—and recently even those in the wealthier countries in the Global North—are struggling to manage the impacts we are experiencing around the world in frightening abundance, including record-setting temperatures, fires, floods, and glacial and ice melt. Behind closed doors, policymakers are concerned as they contemplate the increasing likelihood, even under the most ambitious emission reduction pathways, that the world will overshoot the goal agreed upon in the Paris Agreement to limit global average temperature rise to 1.5oC beyond pre-industrial levels.

It is in this “overshoot context” that interest is growing in an emerging, potentially supplementary …

Breaking The Loop: Strategies For Fighting Climate Change On U.S. Farms, Ashley Barry

Honors Capstones

Climate change is an increasingly urgent area of research due to the hardships it causes for lands and communities across the globe. Specifically in regard to the United States (U.S.), climate change has many concerning implications on our agricultural system. Increased weather hazards, decreased crop production, and drought are just a few of the hardships American farmers are facing in their fight to keep their farms alive and feed their communities, despite a rapidly changing climate. This study investigates how farmers can fight and prevent climate change through the use of specific mitigation and adaptation strategies on their farms. Semi- …

Joint Global Responsibility Fund For Climate, Conservation, And Communities: A Proposed Innovative Tax-Based Funding Mechanism, Tamar Ron

New England Journal of Public Policy

Nature-based solutions address biodiversity loss, climate change, and societal challenges at the local, national, regional, and global levels. The costs of their conservation, however, are mostly local and national in nature. Confronting the rolling dual crisis of biodiversity loss and climate change requires us to recognize nature’s intrinsic value. Moreover, we must find practical ways for their monetary valuation to be channeled as payment for the services of conservation custodians. It is suggested here to translate the value of natural assets and the understanding of the local costs and global benefits of their conservation, into an innovative and ambitious funding …

Emerging Sensing, Imaging, And Computational Technologies To Scale Nano-To Macroscale Rhizosphere Dynamics – Review And Research Perspectives, Amir H. Ahkami, Odeta Qafoku, Tiina Roose, Quanbing Mou, Yi Lu, Zoe G. Cardon, Yuxin Wu, Chunwei Chou, Joshua B. Fisher, Tamas Varga, Pubudu Handakumbura, Jayde A. Aufrecht, Arunima Bhattacharjee, James J. Moran

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The soil region influenced by plant roots, i.e., the rhizosphere, is one of the most complex biological habitats on Earth and significantly impacts global carbon flow and transformation. Understanding the structure and function of the rhizosphere is critically important for maintaining sustainable plant ecosystem services, designing engineered ecosystems for long-term soil carbon storage, and mitigating the effects of climate change. However, studying the biological and ecological processes and interactions in the rhizosphere requires advanced integrated technologies capable of decoding such a complex system at different scales. Here, we review how emerging approaches in sensing, imaging, and computational modeling …

Understanding Marsh Elevation And Accretion Processes And Vulnerability To Rising Sea Levels Across Climatic And Geomorphic Gradients In California, Usa, Karen M. Thorne, Mckenna L. Bristow, Lyndsay L. Rankin, Katya E. Kovalenko, Justine A. Neville, Chase M. Freeman, Glenn R. Guntenspergen

State & Federal Reports and Publications

Tidal marshes build elevations by below- and aboveground organic and mineral soil processes. Marsh elevation and accre- tion data can be used to determine if marshes are keeping pace with sea-level rise. Using a network of 54 deep rod surface elevation tables with paired feldspar marker horizon plots, we tracked elevation and accretion trends across 16 marshes in California, USA. All sites had overall positive gains across years that included severe drought conditions and extreme rain events. Marsh elevation relative to tidal datum (z*) was the key predictor for elevation and accretion rates, with higher change rates at lower z* …

Ortho-Fluoro Or Ortho Effect? Oxidative Addition Of Zerovalent Nickel Into The C–Cn Bond Of Substituted Benzonitriles, Tülay Ateşin, William D. Jones, Abdurrahman C. Atesin

School of Earth, Environmental, & Marine Sciences Faculty Publications

A recent study of the oxidative addition of zerovalent Ni to the C–CN bond of F-substituted benzonitriles showed significantly increased stabilization of the C–CN oxidative addition products with o-F groups (−6.6 kcal/mol per o-F) compared to m-F groups (−1.8 kcal/mol per m-F). To answer the question of whether this is an o-F effect or an ortho effect, in this study the effect of CF3 and CH3 groups on the oxidative addition of the [Ni(dmpe)] fragment [dmpe = 1,2-bis(dimethylphosphino)ethane] to the C–CN bond of benzonitriles has been studied. A density functional theory study of the reaction …

The Influence Of Grazing Systems On Bird Species Richness And Density In The Nebraska Sandhills, Silka L.F. Kempema, Walter H. Schacht, Larkin A. Powell

School of Natural Resources: Faculty Publications

Grazing is the de facto method of habitat management used in much of the Nebraska Sandhills. Ranchers use a variety of grazing systems, and our goal was to evaluate the effects of systems on grassland birds. We estimated the species richness and density of grassland birds for three grazing systems used on private ranches: long, medium, and short duration grazing systems. We observed sixty species, and the grazing system with pastures utilizing long duration grazing periods had the highest estimates of species richness as well as the most heterogeneous habitat structure. Differences in species richness among systems were most pronounced …

Integration Of Algae And Biomass Processes To Synthesize Renewable Bioproducts For The Circular Economy, Jessica Martin

USF Tampa Graduate Theses and Dissertations

Rapid population growth and global industrialization have substantially heightened the demand for fossil-based fuels and products in various sectors of the global economy, including energy production, transportation fuels, and as raw materials for petrochemicals. The intense consumption of fossil fuels has caused immense environmental impacts, especially pertaining to carbon dioxide emissions. Shifting to renewable feedstocks (raw materials) is expected to reduce these emissions by lowering the carbon footprint of fuels and products compared to traditional fossil-derived alternatives. This transition aligns with the goal of creating a sustainable and circular economy, emphasizing efficient resource use, and reducing waste generation through recycling …

Pathogenicity In Chickens And Turkeys Of A 2021 United States H5n1 Highly Pathogenic Avian Influenza Clade 2.3.4.4b Wild Bird Virus Compared To Two Previous H5n8 Clade 2.3.4.4 Viruses, Mary J. Pantin-Jackwood, Erica Spackman, Christina Leyson, Sungsu Youk, Scott A. Lee, Linda M. Moon, Mia K. Torchetti, Mary L. Killian, Julianna B. Lenoch, Darrell R. Kapczynski, David E. Swayne, David L. Suarez

United States Department of Agriculture Wildlife Services: Staff Publications

Highly pathogenic avian influenza viruses (HPAIVs) of subtype H5 of the Gs/GD/96 lineage remain a major threat to poultry due to endemicity in wild birds. H5N1 HPAIVs from this lineage were detected in 2021 in the United States (US) and since then have infected many wild and domestic birds. We evaluated the pathobiology of an early US H5N1 HPAIV (clade 2.3.4.4b, 2021) and two H5N8 HPAIVs from previous outbreaks in the US (clade 2.3.4.4c, 2014) and Europe (clade 2.3.4.4b, 2016) in chickens and turkeys. Differences in clinical signs, mean death times (MDTs), and virus transmissibility were found between chickens and …

The Fierce Green Fire: Vol. 14 Issue 9, Wofford College Environmental Studies Program

The Fierce Green Fire

No abstract provided.

Draft Final 2023 Residential Metals Abatement Program (Rmap) Whitehall Borrow Submittal, Pioneer Technical Services, Inc.

Silver Bow Creek/Butte Area Superfund Site

No abstract provided.

Draft Final 2023 Residential Metals Abatement Program (Rmap) Whitehall Borrow Submittal, Pioneer Technical Services, Inc.

Silver Bow Creek/Butte Area Superfund Site

No abstract provided.

Evaluating The Contamination By Indoor Dust In Dubai, Yousef Nazzal, Alina Bărbulescu, Manish Sharma, Fares Howari, Muhammad Naseem

All Works

Nowadays, people spend most of their time indoors. Despite constantly cleaning these spaces, dust apparition cannot be avoided. Since dust can contain chemical elements that negatively impact people's health, we propose the analysis of the metals from the indoor dust component collected in different locations in Dubai, UAE. Multivariate statistics (correlation matrix, clustering) and quality indicators (QI)-Igeo, PI, EF, PLI, Nemerow-were used to assess the contamination level with different metals in the dust. We proposed two new QIs (CPI and AQI) and compared the results with those provided by the most used indices-PLI and Nemerow. It is shown that high …

The Ecological Consequences Of Salty Fresh Waters, Bill Hintz

Sustainability Seminar Series

Freshwater ecosystems worldwide are getting saltier. This will change the ecology and functioning of freshwater ecosystems and threatens the services fresh waters provide us as humans, such as drinking water quality. In this presentation, Dr. Hintz will explain new research that investigates the ecological consequences of freshwater salinization and how current water quality guidelines need to be reevaluated to protect freshwater ecosystems.

Ecosystem Service Valuation Of Blue Carbon Habitats: A Review For Saltmarshes And Seagrasses, Geraldine Doolan, Stephen Hynes

Journal of Ocean and Coastal Economics

Oceans and coastal marine ecosystems, particularly vegetated coastal habitats such as mangroves, seagrass, and saltmarsh, play a significant role in the global carbon cycle as long-term carbon sinks. Ensuring that these habitats continue to function as sinks and do not become sources of emissions through habitat degradation is vital for climate and environmental policy goals. These blue carbon ecosystems also provide a number of other important ecosystem services to societies. Understanding the economic value of blue carbon ecosystems is necessary to make informed policy decisions that weigh the costs and benefits of ecosystem management plans. This paper reviews the current …

Draft Final 2023 Residential Metals Abatement Program (Rmap) Whitehall Borrow Submittal, Pioneer Technical Services, Inc.

Silver Bow Creek/Butte Area Superfund Site

No abstract provided.

Uavs And Deep Neural Networks: An Alternative Approach To Monitoring Waterfowl At The Site Level, Zachary J. Loken

LSU Master's Theses

Understanding how waterfowl respond to habitat restoration and management activities is crucial for evaluating and refining conservation delivery programs. However, site-specific waterfowl monitoring is challenging, especially in heavily forested systems such as the Mississippi Alluvial Valley (MAV)—a primary wintering region for ducks in North America. I hypothesized that using uncrewed aerial vehicles (UAVs) coupled with deep learning-based methods for object detection would provide an efficient and effective means for surveying non-breeding waterfowl on difficult-to-access restored wetland sites. Accordingly, during the winters of 2021 and 2022, I surveyed wetland restoration easements in the MAV using a UAV equipped with a dual …

Raccoon Spatial Ecology In The Rural Southeastern United States, Jacob E. Hill, Madison L. Miller, James L. Helton, Richard B. Chipman, Amy Gilbert, University Of Georgia, Guha Dharmarajan, Olin E. Rhodes Jr.

United States Department of Agriculture Wildlife Services: Staff Publications

The movement ecology of raccoons varies widely across habitats with important implications for the management of zoonotic diseases such as rabies. However, the spatial ecology of raccoons remains poorly understood in many regions of the United States, particularly in the southeast. To better understand the spatial ecology of raccoons in the southeastern United States, we investigated the role of sex, season, and habitat on monthly raccoon home range and core area sizes in three common rural habitats (bottomland hardwood, upland pine, and riparian forest) in South Carolina, USA. From 2018–2022, we obtained 264 monthly home ranges from 46 raccoons. Mean …

Raccoon Spatial Ecology In The Rural Southeastern United States, Jacob E. Hill, Madison L. Miller, James L. Helton, Richard B. Chipman, Amy T. Gilbert, James C. Beasley, Guha Dharmarajan, Olin E. Rhodes Jr.

United States Department of Agriculture Wildlife Services: Staff Publications

The movement ecology of raccoons varies widely across habitats with important implications for the management of zoonotic diseases such as rabies. However, the spatial ecology of raccoons remains poorly understood in many regions of the United States, particularly in the southeast. To better understand the spatial ecology of raccoons in the southeastern US, we investigated the role of sex, season, and habitat on monthly raccoon home range and core area sizes in three common rural habitats (bottomland hardwood, upland pine, and riparian forest) in South Carolina, USA. From 2018–2022, we obtained 264 monthly home ranges from 46 raccoons. Mean monthly …