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Cosee Ocean Inquiry Group Report: Opportunities For Creating Lifelong Ocean Science Literacy, Paul Boyle, Vince Breslin, Lisa Craig Brisson, John Fraser, Alan J. Friedman, Katie Gardner, Sarah Schoedinger, Jerry Schubel, Steve Uzzo, Steven Yalowitz

School for the Environment General Publications

This Inquiry Group Report for the Centers for Ocean Sciences Education Excellence Ocean Communities in Education And Social Networks (COSEE OCEAN) provides a fresh look at how broader ocean science literacy can be developed, especially through less-recognized channels such as opportunistic learning, the private and “third” sectors, and the enormously varied activities under the heading of informal science education. The 10 authors of this report (see Contributors section) have been working together for two years to find and review a range of issues and resources for current and potential ocean science literacy providers, both professional and volunteer.

Several chapters provide …

Ecotypes Of An Ecologically Dominant Prairie Grass (Andropogon Gerardii) Exhibit Genetic Divergence Across The U.S. Midwest Grasslands’ Environmental Gradient, Miranda M. Grey, Paul St. Amand, Nora M. Bello, Matthew B. Galliart, Mary Knapp, Karen A. Garrett, Theodore J. Morgan, Sarah G. Baer, Brian R. Maricle, Eduard D. Akhunov, Loretta C. Johnson

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Big bluestem (Andropogon gerardii) is an ecologically dominant grass with wide distribution across the environmental gradient of U.S. Midwest grasslands. This system offers an ideal natural laboratory to study population divergence and adaptation in spatially varying climates.

Objectives were to: (i) characterize neutral genetic diversity and structure within and among three regional ecotypes derived from 11 prairies across the U.S. Midwest environmental gradient, (ii) distinguish between the relative roles of isolation by distance (IBD) vs. isolation by environment (IBE) on ecotype divergence, (iii) identify outlier loci under selection and (iv) assess the association between outlier loci and climate.

Using two …

Sustainability Of Sustainability: Exploring Alternatives In Alternative Energy, Corey C. Cooling

Honors Program Theses

In light of a gap in the literature of what makes or breaks student biodiesel conversion programs, this thesis will give a review and analysis of select existing biodiesel conversion programs and suggest a model reflecting the characteristics of successful student programs.

The study’s research questions are:

1. What are the common themes or factors successful programs exhibit?

2. What institutional factors create a productive environment for biodiesel programs?

3. Can the tactics of successful programs be generalized?

Firstly, I define successful programs as programs that are financially feasible, develop student skills, lower the environmental impact of universities and foster …

Comparative Phylogeography Of Glassfrogs (Vitreorama) Endemic To The Brazilian Altantic Rainforest, Zoe Spanos

Dissertations and Theses

The Brazilian Atlantic Forest harbors one of the most diverse faunas of the world, including 2-3% of all known vertebrate species. Understanding the role of both climate and landscape in shaping current biodiversity patterns has been the focus of many recent phylogeographic studies. Here I explore multiple factors thought to have impacted the generation of local diversity in the Brazilian Atlantic Forest (AF) using two montane, stream-associated species of glassfrogs – V. eurygnatha and V. uranoscopa. I integrate species distribution modeling, path analysis, and molecular data to test the role of climatic stability, rivers, mountain chains, and geographic distance in …

Unintended Outcomes Of Farmers' Adaptation To Climate Variability: Deforestation And Conservation In Calakmul And Maya Biosphere Reserves, Claudia Rodriguez-Solorzano

Dartmouth Scholarship

Minimizing the impact of climate change on farmer livelihoods is crucial, but adaptation efforts may have unintended consequences for ecosystems, with potential impacts on farmers’ welfare. Unintended outcomes of climate adaptation strategies have been widely discussed, however, empirical exploration has been neglected. Grounded in scholarship on climate adaptation, environmental governance, social–ecological systems, and land-use change, this paper studies whether farmers’ climate adaptation contributes to deforestation or forest conservation. The paper draws on interviews with 353 farmers from 46 communities in Calakmul Biosphere Reserve in Mexico and Maya Biosphere Reserve in Guatemala. Farmers in the area of study have implemented adaptation …

Remediation Of Tetracycline From Water Sources Using Vetiver Grass (Chrysopogon Zizanioides L. Nash) And Tetracycline-Tolerant Root-Associated Bacteria, Aparupa Sengupta

Dissertations, Master's Theses and Master's Reports - Open

Antibiotics are emerging contaminants worldwide. Due to insufficient policy regulations, public awareness, and the constant exposure of the environment to antibiotic sources has created a major environmental concern. Wastewater treatment plants (WWTP) are not equipped to filter-out these compounds before the discharge of the disinfected effluent into water sources (e.g., lakes and streams) and current available technologies are not equipped to remediate these compounds from environmental sources. Hence, the challenge remains to establish a biological system to remove these antibiotics from wastewater. An invitro hydroponic remediation system was developed using vetiver grass (Chrysopogon zizanioides L. Nash) to remediate tetracycline …

Enzyme Optimization For Lignocellulose Hydrolysis Using Mechanistic Modeling, Adam S. Marlowe

Dissertations, Master's Theses and Master's Reports - Open

A novel mechanistic model for the saccharification of cellulose and hemicellulose is utilized to predict the products of hydrolysis over a range of enzyme loadings and times. The mechanistic model considers the morphology of the substrate and the kinetics of enzymes to optimize enzyme concentrations for the enzymatic hydrolysis of cellulose and hemicellulose simultaneously. Substrates are modeled based on their fraction of accessible sites, glucan content, xylan content, and degree of polymerizations. This enzyme optimization model takes into account the kinetics of six core enzymes for lignocellulose hydrolysis: endoglucanase I (EG1), cellobiohydrolase I (CBH1), cellobiohydrolase II (CBH2), and endo-xylanase (EX) …

Characterizing And Improving Production Of Fermentable Sugars And Co-Products From A Forest Product Industry Wastewater Stream, Jifei Liu

Dissertations, Master's Theses and Master's Reports - Open

Hardboard processing wastewater was evaluated as a feedstock in a bio refinery co-located with the hardboard facility for the production of fuel grade ethanol. A thorough characterization was conducted on the wastewater and the composition changes of which during the process in the bio refinery were tracked. It was determined that the wastewater had a low solid content (1.4%), and hemicellulose was the main component in the solid, accounting for up to 70%. Acid pretreatment alone can hydrolyze the majority of the hemicellulose as well as oligomers, and over 50% of the monomer sugars generated were xylose. The percentage of …

Denitrification In Soils: From Genes To Environmental Outcomes, Jianqiu Zheng

Dissertations, Master's Theses and Master's Reports - Open

Denitrification is an important process of global nitrogen cycle as it removes reactive nitrogen from the biosphere, and acts as the primary source of nitrous oxide (N₂O). This thesis seeks to gain better understanding of the biogeochemistry of denitrification by investigating the process from four different aspects: genetic basis, enzymatic kinetics, environmental interactions, and environmental consequences. Laboratory and field experiments were combined with modeling efforts to unravel the complexity of denitrification process under microbiological and environmental controls.

Dynamics of denitrification products observed in laboratory experiments revealed an important role of constitutive denitrification enzymes, whose presence were further confirmed …

Characterization Of A Plant Gene Family Expanded In Glycine Max, Lisa Snoderly-Foster

Masters Theses

"Glycine max, commonly named the cultivated soybean, is one of the oldest and most important food crops in the world. The study of the G. max genome provides valuable insight into the molecular mechanisms that govern its reproduction and environmental responsiveness, key factors in maximizing crop yield. Since the complete sequencing of the genome in 2010, the analysis has become faster and easier, especially with the development of numerous web-based, publically accessible bioinformatics tools.

This research effort utilizes these tools to characterize a small, unannotated G. max gene family. Although no definitive evidence was uncovered for the production of a …

Dephosphorylation Of Iqg1 By Cdc14 Temporally Regulates Actin Ring Formation, Daniel Patrick Miller

Masters Theses

"Cytokinesis is the final step in cell division when the cell separates the cytoplasm by contracting a ring composed of filamentous actin (F-actin) and type II myosin. Iqg1, an IQGAP family member, is an essential scaffolding protein in budding yeast (S. cerevisiae) required for actin recruitment to, and contraction of, the actomyosin ring. Actin is recruited by the calponin homology domain (CHD) in anaphase after Iqg1 is localized to the bud neck. Consensus sites for the cyclin-dependent kinase (CDK) Cdc28 were identified flanking the CHD. This led us to the hypothesis that phosphorylation of Iqg1 by Cdc28 negatively regulates actin …

Addressing Public Health Risks Of Persistent Pollutants Through Nutritional Modulation And Biomimetic Nanocomposite Remediation Platforms, Bradley J. Newsome

Theses and Dissertations--Chemistry

Due to their relative chemical stability and ubiquity in the environment, chlorinated organic contaminants such as polychlorinated biphenyls (PCBs) pose significant health risks and enduring remediation challenges. Engineered nanoparticles (NPs) provide a novel platform for sensing/remediation of these toxicants, in addition to the growing use of NPs in many industrial and biomedical applications, but there remains concern for their potential long-term health effects. Research highlighted herein also represents a transdisciplinary approach to address human health challenges associated with exposure to PCBs and NPs. The objectives of this dissertation research are two-fold, 1) to develop effective methods for capture/sensing and remediation …

Wetlands And Greenhouse Gas Fluxes: Causes And Effects Of Climate Change – A Meta-Analysis, Robert E. Ventura

Pomona Senior Theses

Climate change is one of the largest problems facing this generation. Anthropogenically caused increases of greenhouse gas emissions is a significant culprit to this problem. Although the obvious problems such as cars, industry, and urbanism garnish a significant amount of the criticism, natural sources such as wetlands are also beginning to contribute to this issue. This is becoming increasingly significant as wetlands shift from being sinks of greenhouse gases to becoming sources as various anthropogenic impacts, including global warming itself, begin to affect the health of the wetlands. The aim of this project is to look at four common types …

Spingolipid Metabolism In A Reptillian Protozoan, Entamoeba Invadens, Duran Dogan Debons

Open Access Theses & Dissertations

Entamoeba invadens (hereinafter E. invadens) is an anaerobic parasitic protozoan that can be found in water and soil. Although the host organisms for this parasite are snakes, lizards, and other reptile species, the parasite is morphologically identical to Entamoeba histolytica, a causative agent of human amebiasis. Entamoeba inavdens exists in two morphological forms--(1) a replicative trophozoite, and (2) a relatively dormant cyst. While the transformation of cyst to trophozoites (called "excystation") takes place in the stomach, the differentiation of trophozoites to cyst (known as "encystation"), occurs in the small intestine. Unlike the cyst, a trophozoite is unable to survive …

Biofuel Feedstock Optimization Considering Different Land Cover Scenarios And Watershed Impacts, Rodney Wayne Vance

Open Access Theses & Dissertations

With an increased demand for renewable energy production, especially the conversion of biomass to biofuels, perennial grasses are gaining interest as a renewable source of biofuel feedstocks. Identifying the trade-offs between bioenergy crop cultivation and nutrient runoff, erosion, and water requirements will be important as the demand for these crops continues to grow. The primary objective of this study is develop an integrated optimal control model that estimates the potential effects on water quality and demand and soil erosion from cultivating switchgrass and other perennial grasses instead of conventional crops at the watershed scale. The Soil and Water Assessment Tool …

Furthering Our Understanding And Assessing The Effectiveness Of Scaling Patterns And Controls Of Land-Atmosphere Carbon Exchange In A Shrubland Of The Chihuahuan Desert With Novel Cyberinfrastructure, Aline Jaimes

Open Access Theses & Dissertations

Over the last century, arid and semiarid regions have undergone intense desertification and in many regions, vegetation has shifted from grassland to shrubland dominated ecosystems. This land cover change has important implications for how desert ecosystems function - especially with regards to land-atmosphere exchange of carbon, water, and energy. Although the extent of desertified landscapes is expected to expand over the next 30 to 40 years, there is a relatively poor understanding of how this state transition will impact ecosystem function and feedbacks to other components of the earth system. Key to addressing this challenge is an improved understanding of …

Effects Of Forest Fragmentation On Central Amazonian Bird Demography, Jared Desmond Wolfe

LSU Doctoral Dissertations

Avian diversity in degraded fragmented Amazonian landscapes depends on the persistence of species in cleared and disturbed areas. Regenerating forest facilitates bird dispersal within degraded Amazonian landscapes and may tip the balance in favor of persistence in previously depauperate habitat patches. Despite the potential value of Amazonian second growth, we lack comparisons of demography among second growth, continuous forest, forest fragments in regenerating landscapes, and truly isolated fragments. Here, we used point-count and capture data to compare Amazonian bird communities among continuous forest plots, 100 ha forest fragments with adjacent second growth, 100 ha forested islands bounded by water, young …

Green Siting For Green Energy, Amy Wilson Morris, Jessica Owley, Emily Capello

Journal Articles

No abstract provided.

Geology And Abiotic Factors: Their Effect On An Aquatic Insect Fauna On The Shawangunk Ridge, Beryl Kahn, Howard Feldman

Lander College for Women - The Anna Ruth and Mark Hasten School Publications and Research

The Shawangunk Ridge in the lower mid-Hudson Valley extends from the vicinity of Rosendale through New Jersey, Pennsylvania, Maryland and Virginia. Within the first thirty miles can be found five “sky lakes”: Mohonk, Minnewaska, Awosting, Mud Pond and Maratanza. Since these lakes occur on the top of the ridge they have no drainage basin. Here we report on the pH and other abiotic factors that impact the aquatic fauna of the Lily Pond (pH 6.58), a small, shallow body of water with a diverse faunal community on the grounds of Mohonk Mountain House. The pH of Mohonk Lake is 7 …

"Mining" For A Reference Condition In Southern West Virginia Streams, Matthew Rouch

Theses and Dissertations

Quarterly samples were used to estimate assemblage-level (all species combined) fish production within three minimally-impacted, southern West Virginia streams. The total annual fish production estimate was highest in Slaunch Fork (37.52 kg∙ha^-1∙y^-1), a tributary of the Tug Fork River, and lowest in Cabin Creek (10.59 kg∙ha^-1∙y^-1), a Guyandotte River tributary. Creek Chub Semotilus atromaculatus, Mottled Sculpin Cottus bairdii and Blacknose Dace Rhinicthys atratulus were the most abundant species among sites, accounting for >90% of all sampled individuals. Reference condition criteria were also selected and metrics calculated for each of the three …

Plant Inhabiting Phytoseiid Predators Of Midwestern Brazil, With Emphasis On Those Associated With The Tomato Red Spider Mite, Tetranychus Evansi (Acari: Phytoseiidae, Tetranychidae), Imeuda P. Furtado, Gilberto José De Moraes, Serge Kreiter, Carlos H.W. Flechtmann, Marie Stéphanne Tixier, Markus Knapp

All Peer-Reviewed Publications

The fauna of phytoseiid mites in the state of Mato Grosso do Sul, in midwestern Brazil, is poorly known. The tomato red spider mite, Tetranychus evansi Baker and Pritchard, is an important pest of Solanaceae in several countries, but it is usually found in low densities in Brazil. It has been hypothesized that this is due to the effect of natural enemies. The objective of this study was to identify phytoseiid mites from Mato Grosso do Sul associated with T. evansi, to identify promising biological control agents for T. evansi in Africa. A survey was conducted in October – November …

Osmb Final Report: Task 6. Tenmile Lake Boat Wash Effectiveness Monitoring, Samuel Cimino, Angela L. Strecker

Center for Lakes and Reservoirs Publications and Presentations

Public awareness of aquatic invasive species and proper boat cleaning procedures may prove to be beneficial in reducing the transport and establishment of aquatic invasive species like New Zealand mud snails and zebra and quagga mussels as well as hydrilla and Eurasian watermilfoil. The primary objectives of this research project were to observe the use and determine the efficacy of a public boat wash station as well as increase the public’s awareness of proper boat cleaning procedures and aquatic invasive species. The Tenmile Lakes Basin Partnership, Oregon State Marine Board, and the United States Forest Service (USFS) have undertaken an …

A Review Of The Hyporheic Zone, Stream Restoration, And Means To Enhance Denitrification, Leanne Merill, David J. Tonjes

Technology & Society Faculty Publications

The hyporheic zone is the subsurface area below and adjacent to a stream where groundwater mixes with stream water, through vertical, lateral, and longitudinal flows. The hyporheic zone connects the stream to uplands and other terrestrial environments. It is a zone of distinct faunal communities, high biological diversity and ecological complexity, and is the site of chemical processing and transformations of ground- and stream waters. The hyporheic zone is important to the overall ecosystem ecology of the stream, and it can influence stream water chemistry. Flows, reactions, and biota in the hyporheic zone are heterogeneous and patchy, making it difficult …

Degradable Plastics And Their Potential To Affect Solid Waste Systems, Krista L. Thyberg, David J. Tonjes

Technology & Society Faculty Publications

Plastic waste forms a substantial part of municipal solid waste and has caused environmental concerns, particularly due to chemical contamination of the environment and effects from persistent litter. Plastics also complicate waste management processes, such as by having poor recovery rates through recycling, and causing contamination in composting operations. One potential means to address some of these challenges is through degradable plastics which, unlike conventional plastics, are designed to decompose at an accelerated rate in specific environments. Degradable plastics aim to address the end-of-life of plastic products and are intended to reduce the environmental impacts associated with their use and …

Developing Rating Curves In A Small Iowa Watershed To Evaluate Nutrient Loading In Streams, Jennifer Mary Shepeck

Dissertations and Theses @ UNI

Dry Run Creek, a tributary to the Cedar River in northeast Iowa, is a watershed under high pressure from the surrounding region. With its headwaters located in farm fields and urban drainage ditches, it is subject to flash flooding and erosion and is on the DNR’s list of impaired waters. Dry Run Creek is similar to other small watersheds across eastern Iowa. As tributaries to the larger rivers that eventually flow into the Mississippi River and then to the Gulf of Mexico, they are significant contributors to the nutrient loading causing the hypoxia in the Gulf. The purpose of this …

Global Assessment Of Radiocarbon Isotopic Analysis For Particulate And Dissolved Organic Carbon In Riverine Systems, Ashley Tucker

Theses and Dissertations

Rivers are a significant source of particulate and dissolved organic carbon (POC, DOC) into inland waters and coastal systems and provide a fundamental linkage between the terrestrial, oceanic, and atmospheric carbon reservoirs. Recent studies have examined the relationship between the quantity and form (POC vs. DOC) of carbon delivered to the aquatic system; however, little is known about the age of POC and DOC exported and how the radiocarbon age may vary with latitude, topographic gradient, vegetation, and land use. I provide the first global synthesis of published radiocarbon values of POC and DOC (∆14C). Inclusion of DOC and POC …

Modelling Cholera In Periodic Environments, Drew Posny, Jin Wang

Mathematics & Statistics Faculty Publications

We propose a deterministic compartmental model for cholera dynamics in periodic environments. The model incorporates seasonal variation into a general formulation for the incidence (or, force of infection) and the pathogen concentration. The basic reproduction number of the periodic model is derived, based on which a careful analysis is conducted on the epidemic and endemic dynamics of cholera. Several specific examples are presented to demonstrate this general model, and numerical simulation results are used to validate the analytical prediction.

Ground Arthropod Abundance In Switchgrass And Diverse Prairie Agroenergy Crops, Stephanie Paape, Libby Torresani, Mark C. Myers

Undergraduate Student Work

The University of Northern Iowa’s Tallgrass Prairie Center converted corn and soybean fields in the Cedar River Natural Resource Area to four mixes of perennial tallgrass prairie species. Research plots were randomly seeded with one of four treatments of native prairie vegetation including a switchgrass monoculture and a 32-species prairie mix. We studied ground arthropod abundance in Switchgrass and the 32-species prairie mix at various distances from the nearest woody edge using pitfall traps. We hypothesized that a 32-species Prairie mix would support greater numbers of ground arthropods than a Switchgrass monoculture and that ground arthropod abundance would be greater …

Grassland Bird Nest Survival In Perennial Agroenergy Crops, Libby Torresani, Stephanie Paape, Mark C. Myers

Undergraduate Student Work

Previous research had been done in 2011 and 2012 regarding bird nest survival rates in the Cedar River Natural Resource Area in Washburn, IA. Further analysis of bird nest survival rates was done in this study to research how nest age, calendar date, soil type, and vegetation type influence the success or failure of these nests. New nests were identified in the prairie plots of the Cedar River Natural Resource Area and added to the previous sample size from the original study. A sample size of 97 bird nests total and 67 Dickcissel nests –SPAM (Spiza Americana) were …

Land Cover Changes And Their Biogeophysical Effects On Climate, Rezaul Mahmood

School of Natural Resources: Faculty Publications

No abstract provided.