Digital Commons Network^™

Heavy Metal Uptake By Four Plant Species: Radish, Indian Mustard, Corn, And Soybean., Oluwasogo Bolaji Alonge

Graduate Theses, Dissertations, and Problem Reports (ETD)

Metal contaminated soils are a problem throughout the world. Because metals accumulate in the food chain they have been linked to adverse human and ecosystem health. One promising approach to remediating metal contaminated soils is phytoremediation but success has been limited by an incomplete understanding of the factors that control metal uptake by plants, including the effects when more than one contaminant metal is present in the system. Metal contaminated soil for this study was collected from near Spelter in Harrison County WV, the site of a former zinc smelting site that has contaminated residential soils and stream sediments with …

Evaluating And Prioritizing Stream Restoration In Mined Appalachian Watersheds., Eric Mitchell Miller

Graduate Theses, Dissertations, and Problem Reports (ETD)

The state of West Virginia requires stream mitigation to offset anthropogenic impacts to streams; consequently there is a high concentration of mitigation projects in the mountaintop mining/valley fill region. Projects are typically outside mine boundaries and sites are selected at the discretion of the West Virginia Department of Environmental Protection. This dissertation evaluated current in-stream, natural channel design (NCD) structures and prioritized future project locations. First, we assessed the Little Coal River, which is one of the largest physical restoration projects in the state. The Little Coal drains 994 km2 with extensive historic and contemporary coal mining. The objectives of …

Natural Resources / Graduate Students / Wright & Andrews / Cornell University / 2013, Sarah J. Wright, Camille Andrews

Data Information Literacy Case Study Directory

This case study describes a 6 week for credit Data Information Literacy course taught at Cornell University for students in Natural Resources. Subject covered include: data management, data organization, data analysis and visualization, data sharing, and data quality and documentation. Materials include a book chapter describing the case study, a rubric for developing a data management plan, a class exercise in finding and evaluating data repositories, and the evaluation form used for the course.

Comparison Of Canopy Temperature-Based Water Stress Indices Formaize, Kendall C. Dejonge, Saleh Taghvaeian, Thomas J. Trout, Lousie H. Thomas

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Infrared thermal radiometers (IRTs) are an affordable tool for researchers to monitor canopy tempera-ture. In this maize experiment, six treatments of regulated deficit irrigation levels were evaluated. Themain objective was to evaluate these six treatments in terms of six indices (three previously proposedand three introduced in this study) used to quantify water stress. Three are point-in-time indices whereone daily reading is assumed representative of the day (Crop Water Stress Index – CWSI, Degrees AboveNon-Stressed – DANS, Degrees Above Canopy Threshold – DACT) and three integrate the cumulativeimpact of water stress over time (Time Temperature Threshold – TTT, Integrated Degrees Above …

Clonal Integration In Ludwigia Hexapetala Under Different Light Regimes, Rachael Glover, Rebecca E. Drenovsky, Caryn J. Futrell, Brenda J. Grewell

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Physiological integration among ramets of invasive plant species may support their colonization and spread in novel aquatic environments where growth-limiting resources are spatially heterogeneous. Under contrasting light conditions, we investigated how clonal integration influences growth, biomass allocation and morphology of Ludwigia hexapetala, an emergent floating-leaved macrophyte that is highly invasive in a range of wetland habitat types. In aquatic mesocosms, stolons of offspring ramets were either connected or severed from parent plants, with the pairs exposed to homogenous or heterogeneous combinations of sun or 85% shade. Morphological traits of all ramets were strongly influenced by light environment, and low light …

Fitness Costs Of Resistance To Cry3bb1 Maize By Western Corn Rootworm, A M. Hoffmann, B W. French, R L. Hellmich, N Lauter, A J. Gassmann

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Crops producing toxins derived from the bacterium Bacillus thuringiensis (Bt) are widely planted to manage insect pests including western corn rootworm, Diabrotica virgifera virgifera LeConte (Coleoptera: Chrysomelidae), which is a significant pest of maize in the United States and Europe. However, the widespread use of Bt maize places intense selection pressure on pest populations to evolve resistance, and field-evolved resistance to Bt maize by western corn rootworm has been documented in the United States. In conjunction with non-Bt refuges, fitness costs of Bt resistance can delay resistance evolution. Fitness costs arise in the absence of Bt toxin when individuals with …

Identifying And Evaluating A Suitable Index For Agricultural Drought Monitoring In The Texas High Plains, Jerry E. Moorhead, Prasanna H. Gowda, Vijay P. Singh, Dana O. Porter, Thomas H. Marek, Terry A. Howell, B A. Stewart

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Drought is a complex and highly destructive natural phenomenon that affects portions of the United States almost every year, and severe water deficiencies can often become catastrophic for agricultural production. Evapotranspiration (ET) by crops is an important component in the agricultural water budget; thus, it is advantageous to include ET in agricultural drought monitoring. The main objectives of this study were to (1) conduct a literature review of drought indices with a focus to identify a simple but simultaneously adequate drought index for monitoring agricultural drought in a semiarid region and (2) using the identified drought index method, develop and …

Octocoral Mitochondrial Genomes Provide Insights Into The Phylogenetic History Of Gene Order Rearrangements, Order Reversals, And Cnidarian Phylogenetics, Diego F. Figueroa, Amy R. Baco

School of Earth, Environmental, & Marine Sciences Faculty Publications

We use full mitochondrial genomes to test the robustness of the phylogeny of the Octocorallia, to determine the evolutionary pathway for the five known mitochondrial gene rearrangements in octocorals, and to test the suitability of using mitochondrial genomes for higher taxonomic-level phylogenetic reconstructions. Our phylogeny supports three major divisions within the Octocorallia and show that Paragorgiidae is paraphyletic, with Sibogagorgia forming a sister branch to the Coralliidae. Furthermore, Sibogagorgia cauliflora has what is presumed to be the ancestral gene order in octocorals, but the presence of a pair of inverted repeat sequences suggest that this gene order was not conserved …

Air Quality And Respiratory Health Among Adolescents From The United Arab Emirates, Caroline Barakat-Haddad, Sheng Zhang, Ayesha Siddiqua, Rania Dghaim

All Works

© 2015 Caroline Barakat-Haddad et al. Purpose. To examine the role of air quality in relation to chronic bronchitis, emphysema, asthma, wheeze, and dry cough among adolescents from the United Arab Emirates (UAE). Methods. A survey was administered on 6,363 adolescents from 9 UAE regions. Data consists of demographic, socioeconomic, residential, and behavioural variables, such as location of residence, residing near industry/gas stations/dumpsites/construction sites, residing near overhead power line/plants, exposure to tobacco, residential exposure, ethnicity, concern over air pollution, smoking, and purposely smelling gasoline fumes/glue/correctors/car exhaust/burning black ants. Logistic regression modeling was used to determine significant predictors of respiratory health. …

Vegetation-Based Metrics Of Biotic Integrity For Assessing The Ecological Condition Of Wetlands Of Kentucky, Tanner Matthew Morris

Online Theses and Dissertations

Over the last two centuries, wetland acreage across the world has significantly declined due to human disturbances. It has been estimated that Kentucky has lost over 80% of its wetland area. In response to these losses occurring across the United States, the Clean Water Act was passed to halt this dramatic decline and to restore the ecological integrity of waters of the United States. To enforce the Clean Water Act, a number of ecological assessment techniques have been developed to quantify the ecological quality of the waters of the United States. Kentucky recently adopted a rapid method for assessing the …

Validating A Kentucky Wetland Rapid Assessment Method For Forested Riverine Wetlands Using Vegetation, Bird Surveys, And Landscape Analysis, Johnryan Andrew Polascik

Online Theses and Dissertations

Within the last two centuries, Kentucky has undergone wetland losses exceeding 80 percent (approximately 500,000 hectares). As a response to these losses, the Kentucky Division of Water (KDOW) and Eastern Kentucky University (EKU) developed the Kentucky Wetland Rapid Assessment Method (KY-WRAM) to evaluate the condition of Kentucky's remaining wetlands. The goal of this study was to validate the KY-WRAM for forested riverine wetlands using a vegetation index of biotic integrity (VIBI), bird surveys, and landscape development index (LDI). Specific objectives of this study were to: 1) determine the correlation between bird species richness, VIBI, and LDI with the KY-WRAM in …

Examining The Impacts Of Valley Fills In Stream Ecosystems On Amphibian And Aquatic Insect Communities In Southeastern Kentucky, John Clayton Bourne

Online Theses and Dissertations

Chapter 1. Abstract: Biodiversity is not evenly distributed, and understanding factors that determine spatial patterns of species diversity remains a key question in ecology. Because of their relatively high abundance and complex life cycles, stream salamanders and aquatic insects are important trophic links and serve a critical role in transferring energy. Despite this importance little research has examined their community structure simultaneously in aquatic ecosystems. The primary objective of this research was to determine the structure of these communities across natural areas of southeastern Kentucky and understand what factors impact their abundances and distributions. To address this, we sampled eight …

A Comparison Of Management Strategies For The Federally Endangered Running Buffalo Clover (Trifolium Stoloniferum) On The Blue Grass Army Depot, Ky, Alexi David Dart-Padover

Online Theses and Dissertations

Running buffalo clover (Trifolium stoloniferum) is a federally endangered plant that appears to depend on habitat disturbance, although proposed management strategies such as cattle grazing, mowing, and herbicide application have never been compared in a controlled study. We evaluate the efficacy of these techniques on the Blue Grass Army Depot (BGAD) in Madison County, KY, where one of T. stoloniferum’s largest populations occurs. Fifty-nine patches of T. stoloniferum on the BGAD were treated annually between 2012 and 2014 with combinations of mowing and grass-specific herbicide. Patches of T. stoloniferum also were exposed to one of three types of cattle exposure …

Sheep Updates 2015 - Ravensthorpe, Bruce Mullan, Kate Pritchett, Kimbal Curtis, Chris Wilcox, Mike Hyder, Leigh Sonnerman, Lynne Bradshaw, Geoff Lindon, Katherine Davies, Joe Young, Stephen Lee, Ian Robertson, Lucy Anderton, Hayley Norman, Ed Barrett-Lenard, Jackie Jarvis, Ben Patrick

Sheep Updates

This session covers fourteen papers from different authors:

1. The Sheep Industry Business Innovation project, Bruce Mullan, Sheep Industry Development Director, Department of Agriculture and Food, Western Australia

2. Western Australian sheep stocktake, Kate Pritchett and Kimbal Curtis, Research Officers, Department of Agriculture and Food, Western Australia

3. Wool demand and supply - short term volatility, long term opportunities, Chris Wilcox, Principal of Poimena Analysis

4. Lifetime management for maternal ewes, Mike Hyder, Research Officer, Department of Agriculture and Food, Western Australia

5. National Livestock Identification System (NLIS) for sheep and goats - what is the NLIS database? Leigh Sonnermann, …

Stability Of Monomethylmercury In Water, Sarah Elyse Harvey

Browse all Theses and Dissertations

Monomethylmercury (MMHg) bioaccumulates in aquatic food webs, leading to concentrations in fish that increase health risks for humans who consume fish. As a result of processes that produce and decompose it, MMHg concentrations are notoriously unstable in many natural waters. I examined the stability of MMHg in both filter-sterilized (< 0.1 µm) reagent-grade water and 0.22-µm filtered sediment pore water from Grand Lake St. Marys, Auglaize and Mercer Counties, Ohio, each at three MMHg treatment concentrations (1, 5, and 50 ng/L). Reagent-grade water samples were incubated under both light and dark conditions at either 5 or 26 °C for 112 days. Pore water samples were incubated in the dark at 26 °C, mimicking environmental conditions, for a period of 98 days. Decay constants (± 95% CI) for solutions containing either 1 or 5 ng/L MMHg in reagent-grade water ranged from 0.0009 ± 0.0013 to 0.1225 ± 0.0150 d-1, with greater decay constants at higher temperature and no significant effect of light exposure. In contrast, decay constants for 50 ng/L MMHg in reagent-grade water were much less than those in more dilute solutions, ranging from 0.0018 ± 0.0015 to 0.0055 ± 0.0023 d-1, with both light and temperature influencing MMHg decomposition. Decay constants of MMHg in pore water were found to be independent of initial concentration of MMHg; however, decay constants in pore water samples were 3-fold higher than those in reagent-grade water amended with the same initial concentration (p = 0.007). These results suggest that natural constituents in pore water accelerate MMHg decay reactions.

Integrating Geoscience Into Undergraduate Education About Environment, Society, And Sustainability Using Place-Based Learning: Three Examples, David Gosselin, Steven Burian, Tim Lutz, Julie Maxson

Department of Earth and Atmospheric Sciences: Faculty Publications

From water to energy, and from climate change to natural hazards, the geosciences (marine, Earth, and atmospheric science) have an important role to play in addressing a wide range of societal issues, with particular relevance to how humans can live sustainably on Earth. Although arguably important to developing solutions for many societal issues, more often than not, students have limited exposure to the geosciences in high school or college. To address this geoscience literacy problem, the Interdisciplinary Teaching of Geoscience for a Sustainable Future (InTeGrate) Talent Expansion Center has engaged members of the geoscience community and their colleagues in allied …

Water Quality Of The Upper Little Miami River Watershed In Ohio: Impacts Of Natural And Anthropogenic Processes, David Allan Huff

Browse all Theses and Dissertations

Stream water quality is increasingly threatened by expanding anthropogenic activities, mainly through point source discharges and urban and agricultural runoffs of contaminants getting through a water body's watershed resulting in pollution. Concerns developed as to whether urban or agricultural type activities were causing most water quality impairment issues in the upper Little Miami River watershed in southwest Ohio.

Characterizing the upper Little Miami River (LMR) watershed with respect to water chemistry and Land Use/Land Cover (LULC) while evaluating the sources of any higher than expected natural parameter concentrations, with a strong emphasis on the nutrients phosphorus and nitrate, serves as …

Evaluating Threats To The Rare Butterfly, Pieris Virginiensis, Samantha Lynn Davis

Browse all Theses and Dissertations

Humans have caused drastic changes in ecosystems and communities through their modification of the natural landscape. Rare species, often highly specialized, are more impacted by these changes. Pieris virginiensis is a rare butterfly native to eastern North America that is a species of concern due to negative influences from habitat loss and plant invasion. This thesis discusses several threats to P. virginiensis, including habitat loss, climate change, competition, and the cascading effects of a novel European invasive plant, Alliaria petiolata, that attracts oviposition but does not allow for larval survival.

First, I examined a local extinction event and …

World-Wide Body Size Patterns In Freshwater Fish By Geography, Size Class, Trophic Level, And Taxonomy, Shishir Adhikari

Browse all Theses and Dissertations

The unifying themes of my thesis are patterns in world-wide freshwater fish body sizes and their underlying mechanisms. First, I explored Bergmann's rule in unprecedented detail, which states that body size is negatively correlated to temperature. Categorizing species by body size into quantiles and by trophic levels, I regressed the classes against latitude, temperature, seasonality, minimum temperature and habitable space. I found that Bergmann's rule applies to freshwater fish in general but the strength varies by size class and trophic levels. I concluded that Bergmann's rule in fish is driven by the exclusion of small fish from cold climate due …

Accelerated Degradation Of Chlorinated Solvents By Nanoscale Zero-Valent Iron Coated With Iron Monosulfide And Stabilized With Carboxymethyl Cellulose, Shirin Ghahghaei Nezamabadi

Browse all Theses and Dissertations

Nanoscale zero-valent iron (nZVI) injections have proven to be a promising approach for the remediation of aquifers contaminated by chlorinated organic pollutants. This study compares the efficacy of nZVI in sulfidated and unamended forms in degrading selected chlorinated hyrocarbons (CHCs). Results show that nZVI amended with iron monosulfide (FeS) increases the rate of dechlorination of CT, CF and 1,1,1-TCA compared to that by unamended nZVI. The focus of this research was to characterize degradation kinetics and degradation byproduct distributions of CT, CF and 1,1,1-TCA by nZVI coated by iron monosulfide, which is represented as nZVI/FeS. To prevent nZVI particles from …

Cover Crops And Ecosystem Services: Insights From Studies In Temperate Soils, Humberto Blanco-Canqui, Tim M. Shaver, John L. Lindquist, Charles A. Shapiro, Roger Wesley Elmore, Charles A. Francis, Gary W. Hergert

Department of Agronomy and Horticulture: Faculty Publications

Cover crops (CCs) can provide multiple soil, agricultural production, and environmental benefits. However, a better understanding of such potential ecosystem services is needed. We summarized the current state of knowledge of CC effects on soil C stocks, soil erosion, physical properties, soil water, nutrients, microbial properties, weed control, crop yields, expanded uses, and economics and highlighted research needs. Our review indicates that CCs are multifunctional. Cover crops increase soil organic C stocks (0.1–1 Mg ha^–1 yr^–1) with the magnitude depending on biomass amount, years in CCs, and initial soil C level. Runoff loss can decrease by up …

Nutrient Contributions From Alluvial Soils Associated With The Restoration Of Shallow Water Habitat In The Lower Missouri River, D C. Heimann, D M. Morris, T R. Gemeinhardt

United States Geological Survey: Staff Publications

The Missouri River has been extensively altered as the result of channelization, bank stabilization, and the construction of six main stem reservoirs. In response to the resultant habitat loss, the US Army Corps of Engineers was tasked with restoring approximately 8100 ha of shallow water habitat (SWH), in part, for the benefit of the endangered pallid sturgeon (Scaphirhynchus albus). Construction of off-channel habitats involves the removal and disposal of excavated alluvium either by direct discharge into the river or by secondary erosion, which raised concerns regarding the introduction of sediment and associated nutrients into the Missouri River. Soils from nine …

A Simple Web-Based Tool To Compare Freshwater Fish Data Collected Using Afs Standard Methods, Scott A. Bonar, Norman Mercado-Silva, Matt Rahr, Yuta T. Torrey, Averill Cate Jr.

United States Geological Survey: Staff Publications

The American Fisheries Society (AFS) recently published Standard Methods for Sampling North American Freshwater Fishes. Enlisting the expertise of 284 scientists from 107 organizations throughout Canada, Mexico, and the United States, this text was developed to facilitate comparisons of fish data across regions or time. Here we describe a user-friendly web tool that automates among-sample comparisons in individual fish condition, population length-frequency distributions, and catch per unit effort (CPUE) data collected using AFS standard methods. Currently, the web tool (1) provides instantaneous summaries of almost 4,000 data sets of condition, length frequency, and CPUE of common freshwater fishes collected …

A Popular And Potentially Sustainable Fishery Resource Under Pressure-Extinction Risk And Conservation Of Brazilian Sciaenidae (Teleostei: Perciformes), Ning L. Chao, Flávia L. Frédou, Manuel Haimovici, Monica B. Peres, Beth Polidoro, Marcelo Raseira, Rosana Subira, Kent E. Carpenter

Biological Sciences Faculty Publications

Croakers (Sciaenidae) are major fishery resource in Brazil; constituting 22% of marine and 9% of freshwater fishery landings. Croakers are subject to heavy fishing pressure throughout Brazil, but habitat alteration is also an important threat to regional populations. In this regional Sciaenidae assessment, each species was analyzed for relative risk of extinction, including the identification and quantification of the impact of major threats and existing conservation measures, based on application of the Categories and Criteria of the IUCN Red List of Threatened Species. Of the 52 species of Sciaenid fishes (34 marine and 18 freshwater) present in Brazilian waters, the …

Dynamic Ocean Management: Defining And Conceptualizing Real-Time Management Of The Ocean, Sara M. Maxwell, Elliot L. Hazen, Rebecca L. Lewison, Danial C. Dunn, Helen Bailey, Steven J. Bograd, Dana K. Briscoe, Sabrina Fossette, Alistair J. Hobday, Meredith Bennett

Biological Sciences Faculty Publications

Most spatial marine management techniques (e.g., marine protected areas) draw stationary boundaries around often mobile marine features, animals, or resource users. While these approaches can work for relatively stationary marine resources, to be most effective marine management must be as fluid in space and time as the resources and users we aim to manage. Instead, a shift towards dynamic ocean management is suggested, defined as management that rapidly changes in space and time in response to changes in the ocean and its users through the integration of near real-time biological, oceanographic, social and/or economic data. Dynamic management can refine the …

Ecological Drivers And Habitat Associations Of Estuarine Bivalves, C. Seabird Mckeon, Björn G. Tunberg, Cora A. Johnston, Daniel J. Barshis

Biological Sciences Faculty Publications

Community composition of the infaunal bivalve fauna of the St. Lucie Estuary and southern Indian River Lagoon, eastern Florida was sampled quarterly for 10 years as part of a long-term benthic monitoring program. A total of 38,514 bivalves of 137 taxa were collected and identified. We utilized this data, along with sediment samples and environmental measurements gathered concurrently, to assess the community composition, distribution, and ecological drivers of the infaunal bivalves of this estuary system. Salinity had the strongest influence on bivalve assemblage across the 15 sites, superseding the influences of sediment type, water turbidity, temperature and other environmental parameters. …

Earthworm Populations In A Wheat-Soybean Double-Crop System Under Seven Years Of Established Residue Management Practices, Jill Thomason, Mary Savin, Kristofor Brye, Donn T. Johnson

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Earthworms improve soil structure, distribute litter and microbes, stimulate microbial activity, facilitate decomposition, and increase nitrogen (N) availability for plant growth. Earthworm density is often reduced in low organic matter soils that are intensively managed to grow row crops. This study was designed to relate earthworm density and community composition to residue management after seven years of established management practices in a wheat (Triticum aestivum L.)-soybean (Glycine max (L.) Merr.) double-crop system maintained in Marianna, Ark. Residue management practices included conventional tillage (CT) and no-tillage (NT), N fertilization to produce high and low wheat residue amounts left in the field, …

Speed And Resolution In The Age Of Technological Reproducibility, Shawn Taylor

Theses and Dissertations

The rate of acceleration of the biologic and synthetic world has for a while now, been in the process of exponentially speeding up, maxing out servers and landfills, merging with each other, destroying each other. The last prehistoric relics on Earth are absorbing the same oxygen, carbon dioxide and electronic waves in our biosphere as us. A degraded .jpeg enlarged to full screen on a Samsung 4K UHD HU8550 Series Smart TV - 85” Class (84.5” diag.). Within this composite ecology, the ancient limestone of the grand canyon competes with the iMax movie of itself, the production of Mac pros, …

Empirical Modelling Of Solid-Blocking Effect In A Blazka Respirometer For Gag, A Large Demersal Reef Fish, Richard J. Kline, Daryl C. Parkyn, Debra J. Murie

School of Earth, Environmental, & Marine Sciences Faculty Publications

The effect of solid-body blocking in a large (257 l) Blazka-style respirometer was examined in gag Mycteroperca microlepis. Gag ranging from 376-690 mm total length were tested at velocities from 10 to 91 cm s-1 . The solid blocking effect (SBE) due to fish size, swimming speed, and water temperature was investigated by direct measurement of flow velocity at the area of the fish’s maximum girth as compared to measurements at the rear (center) of the swimming chamber. Three models were compared as corrections for the SBE: the standard Bell and Terhune (BT), a novel modification of the Bell and …

Effect Of Turning Frequency And Season On Composting Materials From Swine High-Rise Facilities, K L. Cook, E L. Ritchey, J H. Loughrin, M Haley, K R. Sistani, C H. Bolster

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Composting swine slurries has several advantages, liquid slurries are converted to solids at lower moisture, the total volume and weight of material is reduced and the stabilized product is more easily transported off-site. Despite this, swine waste is generally stored, treated and applied in its liquid form. High-rise finishing facilities (HRFF) permit liquid slurries to be converted to solids which are partially decomposed underneath the HRFF and then finished in compost windrows. The purpose of this study was to evaluate the effect of turning frequency and ambient weather conditions on biological, physical and chemical properties of composted slurry-woodchip mixtures from …