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The Use Of Machine Learning Algorithms For Water Quality Index Prediction In The Sai Gon River, Vietnam, Thuy Nguyen Thi Diem, Mai Nguyen Thi Huynh, Tra Tran Quang Jan 2025

The Use Of Machine Learning Algorithms For Water Quality Index Prediction In The Sai Gon River, Vietnam, Thuy Nguyen Thi Diem, Mai Nguyen Thi Huynh, Tra Tran Quang

Applied Environmental Research

Accurate prediction of the water quality index (WQI) lays the groundwork for integrated river basins and sustainable water resource management. Recent and accelerated advances in machine learning have led to various promising applications in water quality assessment. The present study leverages the predictive performance of several ML algorithms, including extreme gradient boosting (XGB), the gradient boosting model (GBM), support vector regression (SVR), and the radial basic function (RBF), to predict the WQI at three monitoring sites on the Sai Gon River from 2015–2019. In comparison, the results indicate that the XGB model outperforms the other models when eight parameters, including …


Kinetics Of Hexavalent Chromium Adsorption And Reduction By Living Cells Of The Marine Bacterium Bacillus Cereus, Jittima Charoenpanich, Wachiraphorn Cherdchoo, Jutamas Pantab, Jariya Supakrit Jan 2025

Kinetics Of Hexavalent Chromium Adsorption And Reduction By Living Cells Of The Marine Bacterium Bacillus Cereus, Jittima Charoenpanich, Wachiraphorn Cherdchoo, Jutamas Pantab, Jariya Supakrit

Applied Environmental Research

This study identified Bacillus cereus, an efficient Cr(VI) bioreducer, isolated from marine sediment in Thailand. Batch experiments verified the complete removal of 25 mg L-1Cr(VI) from synthetic wastewater (pH 7.0) after 6 days at 37 °C, 50 rpm,and a biomass concentration of 25% (v/v) culture inoculum. The Freundlich isotherm model demonstrated the best correlation with the Cr(VI) adsorption equilibrium data in the 25–100 mg L-1concentration range (R2= 0.9831). Kinetic analyses indicated that the removal of Cr(VI) by living B. cereusfollowed a pseudo-second-order adsorption model (R2= 0.9875) and a pseudo-second-order reduction model (R2= 0.9807). The adsorption rate can be accuratelycharacterizedvia the …


Generation Z’S Perception Of Skin Cancer And How It Relates To Climate Change, Piercen Bogolea Jan 2025

Generation Z’S Perception Of Skin Cancer And How It Relates To Climate Change, Piercen Bogolea

Honors Undergraduate Theses

Skin cancer is the most common cancer worldwide, and climate change has been identified as a significant contributor. Preventative action early on can help reduce occurrence, but it is unknown if Generation Z is aware of this and is taking the necessary action now to protect themselves. This research aims to gauge the perception of Generation Z on the severity of skin cancer, the relationship between climate change and skin cancer, and the prevalence of preventative measures being taken. A survey was distributed to students aged 18 to 27 enrolled at the University of Central Florida through mixed sampling. The …


Earth Observations Reveal Impacts Of Climate Variability On Maize Cropping Systems In Sub-Saharan Africa, Adomas Liepa, Michael Thiel, Hannes Taubenböck, Doris Klein, Ingolf Steffan-Dewenter, Marcell K. Peters, Sarah Schönbrodt-Stitt, Insa Otte, Tobias Landmann, Zeyaur R. Khan, Michael Ochieng Obondo, Frank Chidawanyika, Emily A. Martin, Tobias Ullmann Jan 2025

Earth Observations Reveal Impacts Of Climate Variability On Maize Cropping Systems In Sub-Saharan Africa, Adomas Liepa, Michael Thiel, Hannes Taubenböck, Doris Klein, Ingolf Steffan-Dewenter, Marcell K. Peters, Sarah Schönbrodt-Stitt, Insa Otte, Tobias Landmann, Zeyaur R. Khan, Michael Ochieng Obondo, Frank Chidawanyika, Emily A. Martin, Tobias Ullmann

All Peer-Reviewed Publications

In Kenya, climate variability and change threaten smallholder, rainfed farms, with crop failures, yield reductions, and pest infestations. Efficient agroecological strategies, such as Push-Pull intercropping, offer documented benefits including pest control, improved soil fertility, and water conservation compared to traditional maize monocropping. To date, no studies exist comparing traditional maize monocropping and Push-Pull intercropping using earth observation tools over several growing seasons in East Africa. Our research addresses this by harmonizing Landsat 7, 8, 9 with Sentinel-2 remote sensing time series from 2016 to 2023. Phenological metrics of 15 growing seasons are extracted based on a threshold method using the …


Spatial Analytics To Elucidate The Incubation Period And Drivers Of Visceral Leishmaniasis: Case Of Turkana County In Kenya, Kennedy Senagi, Maureen Nzilani, Evans Omondi, David P. Tchouassi, Tobias Landmann, Damaris Matoke-Muhia, Emmanuel Okunga, Barrington Gesimba, Elfatih M. Abdel-Rahman, Dawn Maranga, Joseph M. Ndungu, Daniel Masiga Jan 2025

Spatial Analytics To Elucidate The Incubation Period And Drivers Of Visceral Leishmaniasis: Case Of Turkana County In Kenya, Kennedy Senagi, Maureen Nzilani, Evans Omondi, David P. Tchouassi, Tobias Landmann, Damaris Matoke-Muhia, Emmanuel Okunga, Barrington Gesimba, Elfatih M. Abdel-Rahman, Dawn Maranga, Joseph M. Ndungu, Daniel Masiga

All Peer-Reviewed Publications

Introduction: Visceral leishmaniasis (VL) is a severe and neglected tropical disease of public health concern. VL is fatal if not treated. Kenya has experienced multiple outbreaks of the disease since 2017. The underlying drivers of the disease risk dynamics, as well as the incubation period, are not well understood. Methods: We implemented statistical (spatial logistic regression and Bayesian spatial) and machine learning (random forest, support vector machine, AdaBoost, logistic regression, and extra trees) models to estimate the incubation period and predict areas of low/high risk in Turkana County, an endemic VL foci in Kenya. Two-year (2019–2020) patient data were sourced …


Assessment Of The Genetic Population Structure And Extent Of Clonality In A Rare Serpentine Endemic, Lathyrus Biflorus T.W. Nelson & J.P. Nelson (Fabaceae), Using Ddrad Sequencing, Ashley Dickinson Jan 2025

Assessment Of The Genetic Population Structure And Extent Of Clonality In A Rare Serpentine Endemic, Lathyrus Biflorus T.W. Nelson & J.P. Nelson (Fabaceae), Using Ddrad Sequencing, Ashley Dickinson

Cal Poly Humboldt theses and projects

Lathyrus biflorus, or the two-flowered pea, is a rare herbaceous perennial restricted to a single population in Northern California. The species is considered critically imperiled but remains unprotected under state or federal endangered species acts. Despite its rarity, little is known about its life history, reproductive biology, or genetic diversity. Using genome-wide reduced representation sequencing, this study aimed to address these gaps by investigating the molecular evidence of clonality, the number and diversity of genets (unique genetic individuals which can be made up of one or many clonal units or ramets), and overall genetic health of the population. My …


Home Range, Habitat Use, And Fall Migration Of Lewis’S Woodpeckers In The Eastern Cascade Range, Oregon, Cameron Piper Jan 2025

Home Range, Habitat Use, And Fall Migration Of Lewis’S Woodpeckers In The Eastern Cascade Range, Oregon, Cameron Piper

Cal Poly Humboldt theses and projects

Lewis’s woodpecker (Melanerpes lewis), a burn specialist, is experiencing range-wide population declines despite increasing fire activity in the western U.S. The White River Wildlife Area in Oregon hosts the state's only year-round population, raising questions about their breeding, habitat use, and migration. In summer 2024, we tracked nine woodpeckers using telemetry to estimate home range size and overlap. Full home ranges averaged 428 ha, with 66 ha core areas, and showed evidence of growing after nesting. Home ranges overlapped extensively (Full: 91 ± 13%; Core: 63 ± 29%), though individuals had distinct areas of intense use. Males had …


An Integrated Wetland Condition Index And Environmental Metric Framework For The Prairie Pothole Region, Mercedes L. Batalla Jan 2025

An Integrated Wetland Condition Index And Environmental Metric Framework For The Prairie Pothole Region, Mercedes L. Batalla

Electronic Theses and Dissertations

The USDA-NRCS Agricultural Conservation Easement Program (ACEP) assists landowners with protecting, restoring, and enhancing wetlands. Evaluating wetland conservation efforts is crucial for informing future management decisions. However, assessment frameworks vary across regions and among stakeholders. The Prairie Pothole Region is an ecologically unique landscape characterized by its abundance of wetlands that provide important ecosystem services. To evaluate wetlands enrolled in ACEP, I sampled forty-five semi-permanent wetlands in the Prairie Pothole Region from July – August 2023 and 2024. I selected and sampled twenty-six wetlands enrolled in ACEP. Nineteen additional wetlands not enrolled in ACEP were also sampled; these included nine …


Geomorphic And Sedimentary Impact On Beaches Of Eastern Visayas (Philippines) After Typhoon Haiyan In 2013 – Short-Term Recovery And Post-Depositional Changes, Eva Quix, Max Engel, Fabian Boesl, Lia A.L. Gonzalo, Francesca V. Llanes, Mark A.C Bahala, Rodrigo C. Eco, Jan A.M. Galang, Dominik Brill, S. Matthias May, Helmut Brückner Jan 2025

Geomorphic And Sedimentary Impact On Beaches Of Eastern Visayas (Philippines) After Typhoon Haiyan In 2013 – Short-Term Recovery And Post-Depositional Changes, Eva Quix, Max Engel, Fabian Boesl, Lia A.L. Gonzalo, Francesca V. Llanes, Mark A.C Bahala, Rodrigo C. Eco, Jan A.M. Galang, Dominik Brill, S. Matthias May, Helmut Brückner

Research outputs 2022 to 2026

Tropical cyclones and storm surges are a major threat to coastal communities of the Philippines. On 08th November 2013, category 5 Typhoon Haiyan (local name: Yolanda) made landfall on the islands of Eastern Visayas and caused more than 6000 casualties and severe damage to infrastructure and habitats. To assess the geomorphic impact of one of the strongest tropical cyclones on record, three post-typhoon surveys were conducted in 2014, 2015 and 2016 at two severely affected sites on the islands of Leyte and Samar. They aimed at documenting Haiyan-related erosional features and sand deposits. The sites have different geomorphic and geological …


Dataset On Indoor And Outdoor Pm2.5 Concentrations At Two Residences Using Low-Cost Sensors In The Rio Grande Valley Region Of South Texas, Kabir Bahadur Shah, Sai Deepak Pinakana, Mkhitar A. Hobosyan, Armando Montes, Amit U. Raysoni Jan 2025

Dataset On Indoor And Outdoor Pm2.5 Concentrations At Two Residences Using Low-Cost Sensors In The Rio Grande Valley Region Of South Texas, Kabir Bahadur Shah, Sai Deepak Pinakana, Mkhitar A. Hobosyan, Armando Montes, Amit U. Raysoni

School of Earth, Environmental, & Marine Sciences Faculty Publications

Fine particulate matter (PM2.5) is one of the criteria air pollutants associated with adverse respiratory and cardiovascular health effects. This dataset contains hourly and daily averaged measurements of PM2.5 concentrations (µg/m3) collected from two residential homes in the Rio Grande Valley (RGV) Region of South Texas, using PurpleAir-II-SD low-cost sensor. In addition, the dataset also includes temperature (ºC) and relative humidity (%) measured by the sensors. The data was collected for one month during the summer season from indoor (kitchen) and outdoor (front yard) environments at two locations: Home-1 in Weslaco City from June 16, 2024, to July 16, 2024, …


Canary In The Alpine: Shifts In Snowbed Plant Communities Over Time In The Adirondack Mountains Of New York, Katie Rhodes Jan 2025

Canary In The Alpine: Shifts In Snowbed Plant Communities Over Time In The Adirondack Mountains Of New York, Katie Rhodes

Antioch University Dissertations & Theses

Due to their unique species diversity and vulnerability, alpine snowbed communities have the potential to serve as early detection or ‘canary’ communities that can inform scientific understanding of the timing and physical manifestation of a changing alpine ecosystem. In the summer of 2008, fifteen alpine snowbed vegetation community transects over 5 mountain summits were established and studied in the High Peaks Wilderness Complex within the Adirondack State Park by the New York Natural Heritage Program. Each transect was 5 meters long and encompassed five 1x1 meter subplots. These transects were relocated and surveyed again in the summer of 2024 in …


Behavioral Response Of Wild Greater Caribbean Manatees (Trichechus Manatus Manatus) To Playbacks Of Conspecifics In Maya Beach, Belize, Phoebe Sonia Hodson Jan 2025

Behavioral Response Of Wild Greater Caribbean Manatees (Trichechus Manatus Manatus) To Playbacks Of Conspecifics In Maya Beach, Belize, Phoebe Sonia Hodson

Antioch University Dissertations & Theses

The behavioral response of the wild Greater Caribbean manatee (Trichechus manatus manatus) to the acoustic vocalizations of their closely related subspecies, the Florida manatee (Trichechus manatus latirostris), was examined for the first time in Placencia Lagoon, Maya Beach, Belize. The main goal of this study was to determine how vocalizations from conspecifics influence the behavior of the wild Greater Caribbean manatee and how this behavioral change may give insight into the functionality of manatee vocalizations. Three call types (squeak, squeal and high squeak) and chewing sounds were played to varying size aggregations of manatees. Broad behavioral …


Mapping Kirtland’S Warbler (Setophaga Kirtlandii) Stationary Non-Breeding Habitat: Characterizing Land Cover Within The South-Central Bahamas And Evaluating The Impacts Of Sea Level Rise, Cole Anthony Scrivner Jan 2025

Mapping Kirtland’S Warbler (Setophaga Kirtlandii) Stationary Non-Breeding Habitat: Characterizing Land Cover Within The South-Central Bahamas And Evaluating The Impacts Of Sea Level Rise, Cole Anthony Scrivner

Antioch University Dissertations & Theses

Understanding the spatial distribution of current and future habitat for the Kirtland’s Warbler (Setophaga kirtlandii) and other threatened species is critical for guiding conservation planning in The Bahamas. Our study mapped land cover and impacts of sea level rise across the south-central Bahamian islands, as an initial step to determine suitable areas for Kirtland’s Warblers in the region. We used a Random Forest (RF) classification of multispectral satellite image bands and indices from Landsat and Sentinel-2 image composites to predict land cover. The classification identified tropical dry forest communities (broadleaved, semi-evergreen trees and shrubs known as coppice) as …


Characterization Of Microbial Biofilms On Marine Plastics: Community Development And Density Implications For Vertical Transport Dynamics, Gregory M. Joern, Rut Pedrosa-Pàmies, Xiangtao Jiang, Zhanfei Liu, Alexander B. Bochdansky Jan 2025

Characterization Of Microbial Biofilms On Marine Plastics: Community Development And Density Implications For Vertical Transport Dynamics, Gregory M. Joern, Rut Pedrosa-Pàmies, Xiangtao Jiang, Zhanfei Liu, Alexander B. Bochdansky

OES Faculty Publications

Marine plastic pollution poses a significant and escalating threat to ocean ecosystems, with microbial colonization on plastics playing a critical role in determining their environmental fate. Despite the recognized importance of microbial biofilms, their composition, dynamics, and functional contributions on buoyant plastics remain poorly understood. In this study, we leveraged a novel integrative approach by simultaneously employing 16S, 18S, and ITS sequencing alongside microscopy, lipidomics, pigment analysis, adenosine triphosphate and biogenic silica quantification. This comprehensive methodology allowed for a thorough characterization of microbial growth and community dynamics on plastic debris in a mid-latitude, tidal sub-estuary. Our analyses consistently identified diatoms, …


Seasonality Of Submarine Groundwater Discharge Pathways In A Coastal Lagoon Revealed By Radium Isotopes: The Importance Of Porewater Exchange In Summer, Júlia Rodriguez-Puig, Valentí Rodellas, Marc Diego-Feliu, Andres Alcolea, Joaquín Jiménez-Martínez, Irene Alorda-Montiel, Aaron Alorda-Kleinglass, Francisco Pereira, Marisol Manzano, Javier Gilabert, Jordi Garcia-Orellana Jan 2025

Seasonality Of Submarine Groundwater Discharge Pathways In A Coastal Lagoon Revealed By Radium Isotopes: The Importance Of Porewater Exchange In Summer, Júlia Rodriguez-Puig, Valentí Rodellas, Marc Diego-Feliu, Andres Alcolea, Joaquín Jiménez-Martínez, Irene Alorda-Montiel, Aaron Alorda-Kleinglass, Francisco Pereira, Marisol Manzano, Javier Gilabert, Jordi Garcia-Orellana

OES Faculty Publications

Chemical fluxes supplied by Submarine Groundwater Discharge (SGD) can be relevant for coastal ecosystems, particularly lagoonal environments. An appropriate understanding of SGD requires constraining the magnitude and composition of its different pathways. However, the evaluation of SGD pathways is often limited to independent estimations, lacking a comprehensive understanding of the groundwater processes at play. In this study, we combined a Ra mass balance and hydrogeological modeling to simultaneously estimate different SGD pathways flowing into a coastal lagoon. We assessed water fluxes derived from fresh SGD, long-scale recirculation of seawater, and porewater exchange (PEX) into Mar Menor, a highly anthropized coastal …


Successful Eastern Oyster (Crassostrea Virginica) Recruitment On Intertidal Artificial Substrates In Virginia, Usa, Rochelle D. Seitz, Kathleen E. Knick, Emily Suchonic, Amanda Pysher Jan 2025

Successful Eastern Oyster (Crassostrea Virginica) Recruitment On Intertidal Artificial Substrates In Virginia, Usa, Rochelle D. Seitz, Kathleen E. Knick, Emily Suchonic, Amanda Pysher

OES Faculty Publications

Declines of eastern oyster (Crassostrea virginica) populations and scarcity of natural oyster shell necessitate quantifying the effectiveness of artificial oyster reef substrates over varying environmental conditions. Oyster castles are often used in intertidal areas with moderate wave energy; however, new concrete, natural-looking substrates, GROW Reef Tiles, are now available. Eastern oyster recruitment and size on oyster castles (OC) and GROW Reef Tiles (GT), with 27% higher surface area on OC, were assessed three times over 25 months in locations with varying salinity. Four sites in the Chesapeake Bay region were examined: Cherrystone Inlet, Mockhorn Bay, Elizabeth River, and …


Synthesis And Assessment Of Biobased Acrylated Epoxidized Soybean Oil Resins For Stereolithography 3d Printing Of Microfluidic Devices, Natalie S. Romero Figueroa Jan 2025

Synthesis And Assessment Of Biobased Acrylated Epoxidized Soybean Oil Resins For Stereolithography 3d Printing Of Microfluidic Devices, Natalie S. Romero Figueroa

College of Graduate Studies: Theses & Dissertations

This research focuses on the development and characterization of a biobased photocurable resin synthesized from soybean oil for use in stereolithography (SLA) 3D printing of microfluidic devices. The study explores a sustainable alternative to petroleum-based resins by performing an acrylation reaction on epoxidized soybean oil (ESO) to produce acrylated epoxidized soybean oil (AESO), which was then formulated into a photocurable resin with the addition of a photo initiator. The fabrication process involved designing microfluidic molds in SolidWorks and printing them using an Elegoo Mars 4 SLA printer under various exposure and layer thickness parameters. The printed samples consisted of microchannels …


Mapping The End Of Coal: How Policy Strength, Ownership, Finance Shape Global Plant Retirements, Jiwon Kim, Theodor Florian Cojoianu, Theodor F. Cojoianu, Maretno Agus Harjoto, Dariusz Wojcik Jan 2025

Mapping The End Of Coal: How Policy Strength, Ownership, Finance Shape Global Plant Retirements, Jiwon Kim, Theodor Florian Cojoianu, Theodor F. Cojoianu, Maretno Agus Harjoto, Dariusz Wojcik

Research Collection College of Integrative Studies

This study examines how national environmental performance, institutional investor divestment from fossil fuels, investment in renewable energy, and ownership type influence the global phase-out of coal power plants, and whether these effects are constrained by geographical boundaries. Using data on coal plant retirements across 90 countries, we test whether domestic and cross-border factors shape the timing and likelihood of asset closure. We find that companies headquartered in countries with stronger environmental performance are more likely to retire domestic but not foreign plants. While institutional investors divestment is often assumed to exert cross-border influence, our findings show that divestment pressure by …


Natural Hydrogen Soil Gas Emissions Near Harvey, Perth Basin: A Comparative Study Of Survey Methods, Krista Davies, Peter W. Haines, Charmaine Thomas, Leon Normore Jan 2025

Natural Hydrogen Soil Gas Emissions Near Harvey, Perth Basin: A Comparative Study Of Survey Methods, Krista Davies, Peter W. Haines, Charmaine Thomas, Leon Normore

Research outputs 2022 to 2026

Quantifying natural hydrogen soil gas emissions and their controlling factors is critical for assessing hydrogen storage viability and improving exploration strategies. This study provides the first detailed comparison of hydrogen emissions near the DMP Harvey-2 well in the Perth Basin and compares the effectiveness of repeated point surveys and autonomous monitoring in capturing emission variability. Hydrogen concentrations ranged from 0 to >1000 ppm in point surveys, with transient pulses up to 598 ppm detected through continuous monitoring, indicating episodic release. Repeated point surveys successfully captured the overall range of emissions but failed to resolve dynamic processes, such as abrupt flux …


Nesting Population Trend Of The Leatherback Sea Turtle In Bocas Del Toro Province And Comarca Ngäbe-Buglé, Panama For The Period 2002–2022, Sonia Gutiérrez Parejo, Susan E. Piacenza, Raúl García, Cristina Ordóñez, Roldán A. Valverde Jan 2025

Nesting Population Trend Of The Leatherback Sea Turtle In Bocas Del Toro Province And Comarca Ngäbe-Buglé, Panama For The Period 2002–2022, Sonia Gutiérrez Parejo, Susan E. Piacenza, Raúl García, Cristina Ordóñez, Roldán A. Valverde

School of Earth, Environmental, & Marine Sciences Faculty Publications

Sea turtle biologists have made sustained efforts to understand the global status of leatherback sea turtle populations. However, despite progress in assessments, demographics, and ecology, key uncertainties persist in tracking leatherback population trends. Trend analyses have historically focused on nesting beaches, with nest counts providing a widely used index for population abundance. Here, we analysed 20 years of annual nest abundance at four main nesting beaches (Soropta, Bluff, Playa Larga and Chiriquí) in Bocas del Toro province and the Comarca Ngäbe-Buglé, Panama, which constitute the largest nesting leatherback sea turtle population in Central America. We conducted daily nest counts during …


Safety And Sustainability In The Domestic Ferry Sector : A Pci Framework For Esg-Aligned Maritime Governance, Mirza Zeeshan Baig Jan 2025

Safety And Sustainability In The Domestic Ferry Sector : A Pci Framework For Esg-Aligned Maritime Governance, Mirza Zeeshan Baig

World Maritime University Ph.D. Dissertations

The domestic ferry sector is a significant component of maritime transportation. It strengthens social ties, supports economic growth and connects communities. Despites its importance, this industry faces ongoing challenges. These include fragmented governance, operational adequacies, safety risks and environmental concerns. The study deals with these issues by combining a systems-based approach with governance and change management theories. It examines the interplay between human, technical and organizational aspects. The study integrates the rule-based and rights-based maritime governance along with the Lewin’s three stage change management model (Unfreeze, Change, and Refreeze).

At the core of the study is the development of a …


Morphometric Characterization Of Invasive Diaphorina Citri Infesting Citrus And Orange Jasmine In Ghana, Kodwo Dadzie Ninsin, Maxwell Kelvin Billah, Bernard Agyeman Boateng, Jonathan Osei-Owusu, Fred Kormla Ablormeti, Samuel Opuni-Basoa, Aboagye Kwarteng Dofuor, George Edusei, Steve B.S. Baleba, Owusu Fordjour Aidoo Jan 2025

Morphometric Characterization Of Invasive Diaphorina Citri Infesting Citrus And Orange Jasmine In Ghana, Kodwo Dadzie Ninsin, Maxwell Kelvin Billah, Bernard Agyeman Boateng, Jonathan Osei-Owusu, Fred Kormla Ablormeti, Samuel Opuni-Basoa, Aboagye Kwarteng Dofuor, George Edusei, Steve B.S. Baleba, Owusu Fordjour Aidoo

All Peer-Reviewed Publications

Morphometric analysis plays a crucial role in the accurate identification and classification of insect pests, which is essential for implementing effective management strategies. The Asian citrus psyllid (Diaphorina citri Kuwayama; Hemiptera: Liviidae), an invasive species and a known vector of ‘Candidatus Liberibacter asiaticus’ and ‘Ca. Liberibacter americanus,’ the bacterial pathogens associated with Huanglongbing (HLB), has recently emerged as a pest of concern in Ghana. Despite its significance, little is known about the biological traits of field populations in the region. In this study, we examined morphometric variation in D. citri populations infesting citrus and orange jasmine (Murraya paniculata) across different …


Swatting Flies: Biting Insects As Non-Invasive Samplers For Mammalian Population Genomics, Anubhab Khan, Ryan Carter, Chengetai D. Mpamhanga, Daniel Masiga, Manun Channumsin, Marc Ciosi, Oliva Manangwa, Furaha Mramba, Umer Zeeshan Ijaz, Harriet Auty, Barbara K. Mable Jan 2025

Swatting Flies: Biting Insects As Non-Invasive Samplers For Mammalian Population Genomics, Anubhab Khan, Ryan Carter, Chengetai D. Mpamhanga, Daniel Masiga, Manun Channumsin, Marc Ciosi, Oliva Manangwa, Furaha Mramba, Umer Zeeshan Ijaz, Harriet Auty, Barbara K. Mable

All Peer-Reviewed Publications

Advances in next-generation sequencing have allowed the use of DNA obtained from unusual sources for wildlife studies. However, these samples have been used predominantly to sequence mitochondrial DNA for species identification while population genetics analyses have been rare. Since next-generation sequencing allows indiscriminate detection of all DNA fragments in a sample, technically it should be possible to sequence whole genomes of animals from environmental samples. Here we used a blood-feeding insect, tsetse fly, to target whole genome sequences of wild animals. Using pools of flies, we compared the ability to recover genomic data from hosts using the short-read sequencing (Illumina) …


Modelling The Impacts Of Recreational Catch-And-Release Variability On Fish Stock Dynamics, Brett Crisafulli Jan 2025

Modelling The Impacts Of Recreational Catch-And-Release Variability On Fish Stock Dynamics, Brett Crisafulli

Theses: Doctorates and Masters

Recreational fisheries often lack sufficient data for robust stock assessments, and post-release mortality (PRM) of discarded fish, particularly demersal species, poses a significant threat to sustainability. Because demersal fish often experience higher PRM (often due to barotrauma and stress), the substantial global interest in their recreational fisheries (e.g., Australia, Gulf of Mexico, Western Baltic Sea) raises conservation concerns. This study employs three distinct modelling approaches, applied to four reef-dwelling demersal species, to support effective recreational fisheries management by addressing data uncertainty, unintended consequences of management changes, and PRM effects. Specifically, this thesis (1) evaluates variability in average weights of recreationally-caught …


Snag Failure And Fuel Recovery Following Stand-Replacing Fire In The Klamath Mountains, Joseph R. Nicholas Jan 2025

Snag Failure And Fuel Recovery Following Stand-Replacing Fire In The Klamath Mountains, Joseph R. Nicholas

Cal Poly Humboldt theses and projects

High-severity wildfires can produce extensive patches of standing dead trees (snags), which later contribute to surface fuel loading and present a hazard as they decay and fall. In the Klamath Mountains of northwestern California and southwestern Oregon, recent increases in the occurrence of large stand-replacing wildfires have raised concerns about fuel and vegetation recovery trajectories, the likelihood of future fires, and resulting impacts to local communities. Nevertheless, the post-fire environment may offer opportunities to enhance ecological and community resilience. Estimates of snag failure and fuel loading can support land management planning and risk assessment following wildfire, though such work is …


Estimating Mariana Monitor (Varanus Tsukamotoi) Density With Multiple Methods On Islan Dåno’, Guam, And Its Relevance To Guam Rail (Hypotaenidia Owstoni) Conservation, Jack T. Christie Jan 2025

Estimating Mariana Monitor (Varanus Tsukamotoi) Density With Multiple Methods On Islan Dåno’, Guam, And Its Relevance To Guam Rail (Hypotaenidia Owstoni) Conservation, Jack T. Christie

Cal Poly Humboldt theses and projects

The Mariana monitor (Varanus tsukamotoi), or hilitiai, is a medium-sized varanid lizard found throughout the Mariana islands. On Islan Dåno’, a small islet off the southwest coast of Guam, hilitai coexist with one of the rarest birds in the world, the Guam rail (Hypotaenidia oswtoni), or ko’ko’, which were introduced to the island in 2010. Since 2009, hilitai have been lethally removed from the island to reduce possible predation on ko’ko’. After 15 years of removal efforts, I sought to 1) estimate the abundance and density of hiltai, 2) assess the effect of removal effort and …


Spatial Analysis Of American Chestnut (Castanea Dentata) Distribution And Ecology In Kentucky’S Federal Lands, Jacob Raymond Pease Jan 2025

Spatial Analysis Of American Chestnut (Castanea Dentata) Distribution And Ecology In Kentucky’S Federal Lands, Jacob Raymond Pease

Murray State Theses and Dissertations

Anthropogenic factors have been the cause of the decline of tree species across the globe. From unsustainable logging and development to disease and improper management, threats to forests have taken their toll. The American chestnut (Castanea dentata) was once an integral basal tree species in Appalachian forests, but chestnut blight drove the species to functional extinction by the mid-1900s. The recent creation of genetically modified chestnuts gives hope for future restoration of the species throughout its historical range. Despite blight resistance, effective restoration will require optimal site selection for finding and planting chestnuts, which will maximize limited resources. …


Calibration Of A Low-Cost Air Quality Sensor Package Integrated Into The New York State Mesonet, Ellie Hojeily Jan 2025

Calibration Of A Low-Cost Air Quality Sensor Package Integrated Into The New York State Mesonet, Ellie Hojeily

Electronic Theses & Dissertations (2024 - present)

The University at Albany designed and manufactured 59 low-cost air quality sensor packages to continuously measure PM₂.₅, CO, O₃, NO₂, and NO at 38 New York State Mesonet (NYSM) sites located in the New York City Metropolitan Area. Prior to use for monitoring, low-cost sensors require calibration to correct for environmental sensitivities. Calibration models can be developed using data collected from co-location periods in which low-cost sensors are installed at sites with Federal Reference Methods and/or Federal Equivalent Methods instruments. In this study, packages were periodically co-located (calibrated) for 18 to 162 days at the New York State Department of …


Comparison Of Methane Emission Quantification Methods At Landfills In New York State, Alexandra M. Catena Jan 2025

Comparison Of Methane Emission Quantification Methods At Landfills In New York State, Alexandra M. Catena

Electronic Theses & Dissertations (2024 - present)

Greenhouse gas (GHG) emission increases are a consequence of global population rise and economic growth. It is well known that carbon dioxide is the dominant GHG by mass, but methane has received increasing attention recently due to its high warming potential and relatively short lifetime of about a decade. Methane has several different types of both natural and anthropogenic sources including wetlands, waste management, energy, agriculture and farming, and wildfires, which makes tracking and reducing methane emissions a complex problem. The emission rates of each of these sources are highly uncertain due to differing emission estimation methods, which can be …


Theoretical Foundations And Applied Performance Of Periodicity-Aware Imputation: Variable Bandpass Block Bootstrap Methods For Incomplete Time Series, Asmaa Ahmad Jan 2025

Theoretical Foundations And Applied Performance Of Periodicity-Aware Imputation: Variable Bandpass Block Bootstrap Methods For Incomplete Time Series, Asmaa Ahmad

Electronic Theses & Dissertations (2024 - present)

Time series data are prevalent across a wide range of disciplines, including health surveillance, public policy, and environmental monitoring. In the presence of underlying cyclical patterns, the integrity of time series analysis depends critically on the ability to detect, model, and impute structured missing data without compromising the temporal structure. This dissertation introduces and validates a novel imputation framework that integrates the Variable Bandpass Periodic Block Bootstrap (VBPBB) into multiple imputation procedures, improving the accuracy, robustness, and interpretability of time series models under high rates of missingness and noise. The overarching goal of this dissertation was to develop and evaluate …