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Articles 28201 - 28230 of 34234
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Biological Opinion On The Operation Of The Missouri River Main Stem System, Operation And Maintenance Of The Missouri River Bank Stabilization And Navigation Project, And Operation Of The Kansas River Reservoir System
United States Army Corps of Engineers, Omaha District
The U.S. Army Corps of Engineers (Corps) prepared this annual report for interested parties in accordance with reporting recommendations of the Biological Opinion on the Operation of the Missouri River Main Stem System (System), Operation and Maintenance of the Missouri River Bank Stabilization and Navigation Project and Operation of the Kansas River Reservoir System, prepared by the U.S. Fish and Wildlife Service (USFWS) dated November 30, 2000, and the Amendment thereto, dated December 16, 2003 (BiOp). This annual report also documents the Corps’ activities implemented under the Missouri River Bank Stabilization and Navigation Fish and Wildlife Mitigation Project, Iowa, Nebraska, …
Adaptive Management: Background For Stakeholders In The Missouri River Recovery Program, Heida Diefenderfer, Craig Fleming
Adaptive Management: Background For Stakeholders In The Missouri River Recovery Program, Heida Diefenderfer, Craig Fleming
United States Army Corps of Engineers, Omaha District
Since adaptive ecosystem management was described, the need for such a process has been widely recognized by restoration ecologists and managers. In the United States, for example, the National Research Council (NRC) has recommended that ecological restoration projects be designed and executed according to the principles of adaptive planning and management. The NRC report highlights the fact that inflexible restoration goals and plans are unlikely to succeed given that knowledge of natural and social systems is imperfect. As the restoration ecologist John Cairns, Jr., stated: “whatever restoration measures we take, the outcome is highly uncertain.” The reliable existence …
Missouri River Recovery Program: Shallow Water Habitat Program
Missouri River Recovery Program: Shallow Water Habitat Program
United States Army Corps of Engineers, Omaha District
Historically, the Missouri River was a shallow, shifting river well known for muddy waters and rapidly changing channel conditions. The dynamic river provided a wide range of depth, velocity and sediment conditions. Within this environment, the amount of shallow water habitat was quite prevalent, with estimated amounts of more than 100 acres per mile. Shallow water habitat is an aquatic area less than five feet deep where the river flows slowly – less than two feet per second.
Over the years, the U.S. Army Corps of Engineers has been charged by Congress to remove snags, protect banks, construct navigation channels …
Technology-Aided Participative Methods In Environmental Assessment: An International Perspective, Ainhoa Gonzalez, Alan Gilmer, Ronan Foley, John Sweeney, John Fry
Technology-Aided Participative Methods In Environmental Assessment: An International Perspective, Ainhoa Gonzalez, Alan Gilmer, Ronan Foley, John Sweeney, John Fry
Articles
Provisions for citizen involvement in the assessment of potential environmental effects of certain plans, programmes and projects are present in current legislation. An international survey revealed that public participation is common practice in European and some other countries worldwide. However, a number of issues are observed to affect public involvement in EIA/SEA processes and expert opinion differs when evaluating the effectiveness of existing participative methods. Results suggest that technology-aided methods can improve traditional participation processes. In particular, GIS has the potential to increase community knowledge and enhance involvement by communicating information more effectively. Variable accessibility to technology and data quality …
Mapping Of Pressure Losses Through Microchannels With Sweeping-Bends Of Various Angle And Radii, Chase Hansel
Mapping Of Pressure Losses Through Microchannels With Sweeping-Bends Of Various Angle And Radii, Chase Hansel
Electronic Theses and Dissertations
MEMS (Micro Electro Mechanical Systems) have received a great deal of attention in both the research and industrial sectors in recent decades. The broad MEMS category, microfluidics, the study of fluid flow through channels measured on the micrometer scale, plays an important role in devices such as compact heat exchangers, chemical and biological sensors, and lab-on-a-chip devices. Most of the research has been focused on how entire systems operate, both experimentally and through simulation. This paper strives, systematically, to map them through experimentation of the previous to untested realm of pressure loss through laminar square-profile sweeping-bend microchannels. Channels were fabricated …
Analogical Reasoning In The Engineering Design Process And Technology Education Applications, Jenny Daugherty, Nathan Mentzer
Analogical Reasoning In The Engineering Design Process And Technology Education Applications, Jenny Daugherty, Nathan Mentzer
Publications
This synthesis paper discusses the research exploring analogical reasoning, the role of analogies in the engineering design process, and educational applications for analogical reasoning. Researchers have discovered that analogical reasoning is often a fundamental cognitive tool in design problem solving. Regarding the possible role of analogical reasoning in the context of technology education; analogies may be a useful tool to develop student’s design skills, teach abstract or complex concepts, and build students’ analogical reasoning skills for general problem solving. The positive and negative educational implications of analogical reasoning being explored by researchers are also discussed.
Characterization Of Changes In Hyaluronan Following Epidermal Barrier Injury In An Organotypic Model, Gati Ajani
Characterization Of Changes In Hyaluronan Following Epidermal Barrier Injury In An Organotypic Model, Gati Ajani
ETD Archive
The stratum corneum, the outermost layer of the epidermis of skin, provides a functional permeability barrier that is essential for our survival and must be rapidly repaired after injury. Of interest to us, a ubiquitous matrix molecule called hyaluronan (HA) has come to the forefront in wound healing research because it is induced after epidermal injury and may be crucial for barrier repair. This thesis examines the role of HA during recovery from the most fundamental form of skin injury, i.e. selective damage to the stratum corneum. The overall question is whether this form of stratum corneum injury can lead …
Novel Antifreeze Protein Constructs For Improved Activity, Ozge Can
Novel Antifreeze Protein Constructs For Improved Activity, Ozge Can
ETD Archive
Many organisms are exposed to subzero temperatures in nature and can survive these temperatures by the effect of antifreeze proteins (AFPs), which inhibit ice crystal growth and change the morphology of ice crystals. Although the effects of these proteins, such as recrystallization inhibition, ice growth inhibition, and crystal habit changes, are known, a conclusive description of the protein-ice crystal interaction including interaction energy, surface coverage, and lifetime of adsorbate has been elusive. In this study, different antifreeze protein constructs are designed and expressed such that they can be conjugated to polymers to increase the thermal hysteresis activity especially at low …
Mems (Micro-Electro-Mechanical-Systems) Based Microfluidic Platforms For Magnetic Cell Separation, Pulak Nath
Mems (Micro-Electro-Mechanical-Systems) Based Microfluidic Platforms For Magnetic Cell Separation, Pulak Nath
ETD Archive
Microfluidic platforms for magnetic cell separation were developed and investigated for isolation of magnetic particles and magnetically tagged cells from a fluidic sample. Two types of magnetic separation platforms were considered: an Isodynamic Open Gradient Magnetic Sorter (OGMS) and a multistage bio-ferrograph. Miniaturized magnets were designed using magnetostatic simulation software, microfluidic channels were fabricated using microfabrication technology and magnetic separation was investigated using video microscopy and digital image processing. The isodynamic OGMS consisted of an external magnetic circuit and a microfabricated channel (biochip) with embedded magnetic elements. The biochip is placed inside the magnetic field of the external circuit to …
Bio-Signal Analysis In Fatigue And Cancer Related Fatigue;Weakening Of Corticomuscular Functional Coupling, Qi Yang
ETD Archive
Fatigue is a common experience that reduces productivity and increases chance of injury, and has been reported as one of most common symptoms with greatest impact on quality-of-life parameters in cancer patients. Neural mechanisms behind fatigue and cancer related fatigue (CRF) are not well known. Recent research has shown dissociation between changes in brain and muscle signals during voluntary muscle fatigue, which may suggest weakening of functional corticomuscular coupling (fCMC). However, this weakening of brain-muscle coupling has never been directly evaluated. More important information could be gained if fCMC is directly detected during fatigue because a voluntary muscle contraction depends …
Road Surface Condition Detection And Identification And Vehicle Anti-Skid Control, Maosheng Ye
Road Surface Condition Detection And Identification And Vehicle Anti-Skid Control, Maosheng Ye
ETD Archive
Road surface condition is greatly dependent on the surface's friction coefficient. The abrupt change of the coefficient results in variation of wheel slip which likely leads to vehicle instability. Vehicle steering model and the dynamic equations for four-wheel drive vehicle is developed. A new observer, called Extended State Observer (ESO) is used to estimate the longitudinal velocity, lateral velocity and yaw rate, and more importantly an additional quantity known as system dynamics. A trained neural network was employed to help determine the friction coefficient. Fuzzy logic was employed to quickly detect the change of road surface condition and further classify …
Effective Elution Of Rdx And Tnt From Particles Of Comp B In Surface Soil, John S. Furey, Herbert L. Fredrickson, Margaret J. Richmond, Michael Michel
Effective Elution Of Rdx And Tnt From Particles Of Comp B In Surface Soil, John S. Furey, Herbert L. Fredrickson, Margaret J. Richmond, Michael Michel
United States Army: Publications
During live fire training exercises, large amounts of explosives are consumed. Low order detonations of high explosive payloads result in the patchy dispersal of particles of high explosive formulations over large areas of firing range soils. Dissolution of explosives from explosive formulation particles into soil pore water is a controlling factor for transport, fate, and effects of explosive compounds. We developed an empirical method to evaluate soils based on functionally defined effective dissolution rates. An automated Accelerated Solvent Extractor was used to determine the effective elution rates under controlled conditions of RDX and TNT from soil columns containing particles of …
Detection Of The Superoxide Radical Anion Using Various Alkanethiol Monolayers And Immobilized Cytochrome C, Xiaojun J. Chen, Alan C. West, Donald M. Cropek, Scott Banta
Detection Of The Superoxide Radical Anion Using Various Alkanethiol Monolayers And Immobilized Cytochrome C, Xiaojun J. Chen, Alan C. West, Donald M. Cropek, Scott Banta
United States Army: Publications
The superoxide radical anion (SO) is a critical biomarker for monitoring cellular stress responses. Electrochemical SO biosensors are frequently constructed through the covalent immobilization of cytochrome c (Cyt c) onto self-assembled monolayers (SAMs); however, a detailed comparison of these systems as well as configuration influence on SO detection is needed to enable robust applications. Two reaction pathways, oxidation of SO by the SAM-modified gold electrode or electron transfer through a protein and monolayer relay, may be involved during the electrochemical detection of SO with Cyt c, depending on the SAM that is used. Although electrodes with SAMs alone can exhibit …
Phase 2a Trial Of 0, 1, And 3 Month And 0, 7, And 28 Day Immunization Schedules Of Malaria Vaccine Rts,S/As02 In Malaria-Naive Adults At The Walter Reed Army Institute Of Research, Kent E. Kester, James F. Cummings, Christian F. Ockenhouse, Robin Nielsen, B. Ted Hall, Daniel M. Gordon, Robert J. Schwenk, Urszula Krzych, Carolyn A. Holland, Gregory Richmond, Megan G. Dowler, Jackie Williams, Robert A. Wirtz, Nadia Tornieporth, Laurence Vigneron, Martine Delchambre, Marie-Ange Demoitie, W. Ripley Ballou, Joe Cohen, D. Gray Heppner Jr.
Phase 2a Trial Of 0, 1, And 3 Month And 0, 7, And 28 Day Immunization Schedules Of Malaria Vaccine Rts,S/As02 In Malaria-Naive Adults At The Walter Reed Army Institute Of Research, Kent E. Kester, James F. Cummings, Christian F. Ockenhouse, Robin Nielsen, B. Ted Hall, Daniel M. Gordon, Robert J. Schwenk, Urszula Krzych, Carolyn A. Holland, Gregory Richmond, Megan G. Dowler, Jackie Williams, Robert A. Wirtz, Nadia Tornieporth, Laurence Vigneron, Martine Delchambre, Marie-Ange Demoitie, W. Ripley Ballou, Joe Cohen, D. Gray Heppner Jr.
United States Army: Publications
Background: Immunization with RTS,S/AS02 consistently protects some vaccinees against malaria infection in experimental challenges and in field trials. A brief immunization schedule against falciparum malaria would be compatible with the Expanded Programme on Immunization, or in combination with other prevention measures, interrupt epidemic malaria or protect individuals upon sudden travel to an endemic area.
Methods: We conducted an open label, Phase 2a trial of two different full dose schedules of RTS,S/AS02 in 40 healthy malaria-naıve adults. Cohort 1 (n = 20) was immunized on a 0, 1, and 3 month schedule and Cohort 2 (n = 20) on a 0, …
Utility Of Lipid Biomarkers In Support Of Bioremediation Efforts At Army Sites, D. Ringelberg, M. Richmond, K. Foley, C. Reynolds
Utility Of Lipid Biomarkers In Support Of Bioremediation Efforts At Army Sites, D. Ringelberg, M. Richmond, K. Foley, C. Reynolds
United States Army: Publications
Lipid biomarker analysis has proven valuable in testing the hypothesis that attributes of the extant microbiota can directly reflect the occurrence of contaminant biodegradation. Two past research efforts have demonstrated this utility and are described here.
A 4.5 m vertical core was obtained from a diesel fuel oil contamination plume. Core material was assayed for total petroleum hydrocarbons (TPH) and bacterial membrane phospholipids (PLFA) via a single solvent extraction. Microbial viable biomass and the relative abundance of Gram-negative bacterial PLFA biomarkers were found to be significantly correlated with TPH concentration. The core TPH profile also revealed two distinct areas where …
Moderate Zinc Restriction Affects Intestinal Health And Immune Function In Lipopolysaccharide-Challenged Mice, Daniel G. Peterson, Angus G. Scrimgeour, James P. Mcclung, Elizabeth A. Koutsos
Moderate Zinc Restriction Affects Intestinal Health And Immune Function In Lipopolysaccharide-Challenged Mice, Daniel G. Peterson, Angus G. Scrimgeour, James P. Mcclung, Elizabeth A. Koutsos
United States Army: Publications
Zinc (Zn) is an essential nutrient that affects immune function, especially within the digestive system, although the underlying mechanisms are not well understood. This study examined the effects of short-term moderate Zn restriction on intestinal health and immune function in lipopolysaccharide (LPS)-challenged mice through plasma cytokine profiling and histological evaluation of intestinal tissue sections. Adult male mice were fed with a Zn-adequate (40 ppm) or a Zn-marginal (4 ppm) diet for 4 weeks, and then a bacterial challenge was simulated by intraperitoneal injection of LPS (10 μg/g body weight [BW]) or saline (control). BW was recorded weekly, and feed intake …
The 2008 Strategy For United States Air Force Intelligence, Surveillance And Reconnaissance, United States Air Force
The 2008 Strategy For United States Air Force Intelligence, Surveillance And Reconnaissance, United States Air Force
United States Air Force: Publications
Since the inception of the Air Force, our Nation has asked us to create aerospace forces that no adversary could "out gun" under any circumstances. For over six decades we have answered that call. Now the Nation demands that we also create a set of capabilities that no adversary can "out smart" in the future. This strategy outlines our response in the realm of Intelligence, Surveillance and Reconnaissance (ISR).
This is a new document that specifies why and how our Air Force will provide the capacity and capability for full spectrum ISR. It provides the foundation for enabling our air …
Characterization Of Aerosols Containing Zn, Pb, And Cl From An Industrial Region Of Mexico City, Ryan C. Moffet, Yury Desyaterik, Rebecca J. Hopkins, Alexei V. Tivanski, Mary K. Gilles, Y. Wang, V. Shuthanandan, Luisa T. Molina, Rodrigo Gonzalez Abraham, Kirsten S. Johnson, Violeta Mugica, Mario J. Molina, Alexander Laskin, Kimberly A. Prather
Characterization Of Aerosols Containing Zn, Pb, And Cl From An Industrial Region Of Mexico City, Ryan C. Moffet, Yury Desyaterik, Rebecca J. Hopkins, Alexei V. Tivanski, Mary K. Gilles, Y. Wang, V. Shuthanandan, Luisa T. Molina, Rodrigo Gonzalez Abraham, Kirsten S. Johnson, Violeta Mugica, Mario J. Molina, Alexander Laskin, Kimberly A. Prather
United States Department of Energy: Publications
Recent ice core measurements show lead concentrations increasing since 1970, suggesting new non automobile-related sources of Pb are becoming important worldwide (1). Developing a full understanding of the major sources of Pb and other metals is critical to controlling these emissions. During the March, 2006 MILAGRO campaign, single particle measurements in Mexico City revealed the frequent appearance of particles internally mixed with Zn, Pb, Cl, and P. Pb concentrations were as high as 1.14 μg/m3 in PM10 and 0.76 μg/m3 in PM2.5. Real time measurements were used to select time periods of interest …
Assignment Of Polarization-Dependent Peaks In Carbon K-Edge Spectra From Biogenic And Geologic Aragonite, Dong Zhou, Rebecca A. Metzler, Tolek Tyliszczak, Jinghua Guo, Mike Abrecht, Susan N. Coppersmith, P. U. P. A. Gilbert
Assignment Of Polarization-Dependent Peaks In Carbon K-Edge Spectra From Biogenic And Geologic Aragonite, Dong Zhou, Rebecca A. Metzler, Tolek Tyliszczak, Jinghua Guo, Mike Abrecht, Susan N. Coppersmith, P. U. P. A. Gilbert
United States Department of Energy: Publications
Many biominerals, including mollusk and echinoderm shells, avian eggshells, modern and fossil bacterial sediments, planktonic coccolithophores, and foraminifera, contain carbonates in the form of biogenic aragonite or calcite. Here we analyze biogenic and geologic aragonite using different kinds of surface- and bulksensitive X-ray absorption near-edge structure (XANES) spectroscopy at the carbon K-edge, as well as highresolution scanning transmission X-ray microscopy (STXM). Besides the well-known main π* and σ* carbonate peaks, we observed and fully characterized four minor peaks, at energies between the main π* and σ* peaks. As expected, the main peaks are similar in geologic …
Challenges In Earth System Modelling: Approaches And Applications, D.J. Erickson Ill, Robert J. Oglesby, S. Elliott, W. Steffen, G. Brasseur
Challenges In Earth System Modelling: Approaches And Applications, D.J. Erickson Ill, Robert J. Oglesby, S. Elliott, W. Steffen, G. Brasseur
United States Department of Energy: Publications
Earth system modelling has taken on increasing importance over the past several years. These models are being used to address an increasing number of environmental and global change problems of societal concern (e.g. Adams et al., 1998; Easterling et al., 2000; Foley et al., 2003). Perhaps most commonly known is the application to possible greenhouse-gas induced warming (Hoffman et al., 2005). Other compelling problems include the climatic effects of land use changes, aerosols (including sulphate emissions, and smoke from biomass burning; Erickson et al., 1995; Oglesby et al., 1999), changing trace gas fluxes, interactions and feedbacks with the global carbon …
Biogeochemical Processes In Ethanol Stimulated Uranium-Contaminated Subsurface Sediments, Santosh R. Mohanty, Bharati Kollah, David B. Hedrick, Aaron D. Peacock, Ravi K. Kukkadapu, E. E. Roden
Biogeochemical Processes In Ethanol Stimulated Uranium-Contaminated Subsurface Sediments, Santosh R. Mohanty, Bharati Kollah, David B. Hedrick, Aaron D. Peacock, Ravi K. Kukkadapu, E. E. Roden
United States Department of Energy: Publications
A laboratory incubation experiment was conducted with uranium contaminated subsurface sediment to assess the geochemical and microbial community response to ethanol amendment. A classical sequence of terminal electron-accepting processes (TEAPs) was observed in ethanol-amended slurries, with NO3- reduction, Fe(III) reduction, SO42- reduction, and CH4 production proceeding in sequence until all of the added 13Cethanol (9 mM) was consumed. Approximately 60% of the U(VI) content of the sediment was reduced during the period of Fe(III) reduction. No additional U(VI) reduction took place during the sulfate-reducing and methanogenic phases of the experiment. Only gradual reduction of NO …
Reduction Of Tc(Vii) By Fe(Ii) Sorbed On Al (Hydr)Oxides, T. Peretyazhko, J.M. Zachara, S.M. Heald, Ravi K. Kukkadapu, C. Liu, A.E. Plymale, C.T. Resch
Reduction Of Tc(Vii) By Fe(Ii) Sorbed On Al (Hydr)Oxides, T. Peretyazhko, J.M. Zachara, S.M. Heald, Ravi K. Kukkadapu, C. Liu, A.E. Plymale, C.T. Resch
United States Department of Energy: Publications
Under oxic conditions, Tc exists as the soluble, weakly sorbing pertechnetate [TcO4-] anion. The reduced form of technetium, Tc(IV), is stable in anoxic environments and is sparingly soluble as TcO2 ·nH2O(s). Here we investigate the heterogeneous reduction of Tc(VII) by Fe(II) adsorbed on Al (hydr)oxides [diaspore (α-AlOOH) and corundum (α-Al2O3)]. Experiments were performed to study the kinetics of Tc(VII) reduction, examine changes in Fe surface speciation during Tc(VII) reduction (Mössbauer spectroscopy), and identify the nature of Tc(IV)-containing reaction products (X-ray absorption spectroscopy). We found that Tc(VII) was completely …
Long-Term Dynamics Of Uranium Reduction/Reoxidation Under Low Sulfate Conditions, John Komlos, Aaron Peacock, Ravi K. Kukkadapu, Peter R. Jaffe
Long-Term Dynamics Of Uranium Reduction/Reoxidation Under Low Sulfate Conditions, John Komlos, Aaron Peacock, Ravi K. Kukkadapu, Peter R. Jaffe
United States Department of Energy: Publications
The biological reduction and precipitation of uranium in groundwater has the potential to prevent uranium migration from contaminated sites. Although previous research has shown that uranium bioremediation is maximized during iron reduction, little is known on how long-term iron/uranium reducing conditions can be maintained. Questions also remain about the stability of uranium and other reduced species after a long-term biostimulation scheme is discontinued and oxidants (i.e., oxygen) re-enter the bioreduced zone. To gain further insights into these processes, four columns, packed with sediment containing iron as Fe-oxides (mainly Al-goethite) and silicate Fe (Fe-containing clays), were operated in the laboratory under …
Kinetics Of Reduction Of Fe(Iii) Complexes By Outer Membrane Cytochromes Mtrc And Omca Of Shewanella Oneidensis Mr-1, Zheming Wang, Chongxuan Liu, Xuelin Wang, Matthew J. Marshall, John M. Zachara, Kevin M. Rosso, Michel Dupuis, James K. Fredrickson, Steve Heald, Liang Shi
Kinetics Of Reduction Of Fe(Iii) Complexes By Outer Membrane Cytochromes Mtrc And Omca Of Shewanella Oneidensis Mr-1, Zheming Wang, Chongxuan Liu, Xuelin Wang, Matthew J. Marshall, John M. Zachara, Kevin M. Rosso, Michel Dupuis, James K. Fredrickson, Steve Heald, Liang Shi
United States Department of Energy: Publications
Because of their cell surface locations, the outer membrane c-type cytochromes MtrC and OmcA of Shewanella oneidensis MR-1 have been suggested to be the terminal reductases for a range of redox-reactive metals that form poorly soluble solids or that do not readily cross the outer membrane. In this work, we determined the kinetics of reduction of a series of Fe(III) complexes with citrate, nitrilotriacetic acid (NTA), and EDTA by MtrC and OmcA using a stopped-flow technique in combination with theoretical computation methods. Stopped-flow kinetic data showed that the reaction proceeded in two stages, a fast stage that was completed …
Hydrogenase- And Outer Membrane C-Type Cytochrome-Facilitated Reduction Of Technetium(Vii) By Shewanella Oneidensis Mr-1, Matthew J. Marshall, Andrew Plymale, David W. Kennedy, Liang Shi, Zheming Wang, Samantha B. Reed, Alice Dohnalkova, Cody Simonson, Chongxuan Liu, Daad A. Saffarini, Margaret F. Romine, John M. Zachara, Alexander S. Beliaev, James K. Fredrickson
Hydrogenase- And Outer Membrane C-Type Cytochrome-Facilitated Reduction Of Technetium(Vii) By Shewanella Oneidensis Mr-1, Matthew J. Marshall, Andrew Plymale, David W. Kennedy, Liang Shi, Zheming Wang, Samantha B. Reed, Alice Dohnalkova, Cody Simonson, Chongxuan Liu, Daad A. Saffarini, Margaret F. Romine, John M. Zachara, Alexander S. Beliaev, James K. Fredrickson
United States Department of Energy: Publications
Pertechnetate, 99Tc(VII)O4–, is a highly mobile radionuclide contaminant at US Department of Energy sites that can be enzymatically reduced by a range of anaerobic and facultatively anaerobic microorganisms, including Shewanella oneidensis MR-1, to poorly soluble Tc(IV)O2(s). In other microorganisms, Tc(VII)O4– reduction is generally considered to be catalysed by hydrogenase. Here, we provide evidence that although the NiFe hydrogenase of MR-1 was involved in the H2-driven reduction of Tc(VII)O4– [presumably through a direct coupling of H2 oxidation and Tc(VII) reduction], the deletion of both hydrogenase genes did not completely eliminate …
Electron Transfer At The Microbe–Mineral Interface: A Grand Challenge In Biogeochemistry, James K. Fredrickson, John M. Zachara
Electron Transfer At The Microbe–Mineral Interface: A Grand Challenge In Biogeochemistry, James K. Fredrickson, John M. Zachara
United States Department of Energy: Publications
The interplay between microorganisms and minerals is a complex and dynamic process that has sculpted the geosphere for nearly the entire history of the Earth. The work of Dr. Terry Beveridge and colleagues provided some of the first insights into metal–microbe and mineral–microbe interactions and established a foundation for subsequent detailed investigations of interactions between microorganisms and minerals. Beveridge also envisioned that interdisciplinary approaches and teams would be required to explain how individual microbial cells interact with their immediate environment at nano- or microscopic scales and that through such approaches and using emerging technologies that the details of such interactions …
The Minimum Information About A Genome Sequence (Migs) Specification, Dawn Field, George Garrity, Tanya Gray, Norman Morrison, Jeremy Selengut, Peter Sterk, Tatiana Tatusova, Nicholas Thomson, Michael J. Allen, Samuel V. Angiuoli, Michael Ashburner, Nelson Axelrod, Sandra Baldauf, Stuart Ballard, Jeffrey Boore, Guy Cochrane, James Cole, Peter Dawyndt, Paul De Vos, Claude Depamphilis, Robert Edwards, Nadeem Faruque, Robert Feldman, Jack Gilbert, Paul Gilna, Frank Oliver Glöckner, Philip Goldstein, Robert Guralnick, Dan Haft, David Hancock, Henning Hermjakob, Christiane Hertz-Fowler, Phil Hugenholtz, Ian Joint, Leonid Kagan, Matthew Kane, Jessie Kennedy, George Kowalchuk, Renzo Kottmann, Eugene Kolker, Saul Kravitz, Nikos Kyrpides, Jim Leebens-Mack, Suzanna E. Lewis, Kelvin Li, Allyson L. Lister, Phillip Lord, Natalia Maltsev, Victor Markowitz, Jennifer Martiny, Barbara Methe, Ilene Mizrachi, Richard Moxon, Karen Nelson, Julian Parkhill, Lita Proctor, Owen White, Susanna-Assunta Sansone, Andrew Spiers, Robert Stevens, Paul Swift, Chris Taylor, Yoshio Tateno, Adrian Tett, Sarah Turner, David Ussery, Bob Vaughan, Naomi Ward, Trish Whetzel, Ingio San Gil, Gareth Wilson, Anil Wipat
The Minimum Information About A Genome Sequence (Migs) Specification, Dawn Field, George Garrity, Tanya Gray, Norman Morrison, Jeremy Selengut, Peter Sterk, Tatiana Tatusova, Nicholas Thomson, Michael J. Allen, Samuel V. Angiuoli, Michael Ashburner, Nelson Axelrod, Sandra Baldauf, Stuart Ballard, Jeffrey Boore, Guy Cochrane, James Cole, Peter Dawyndt, Paul De Vos, Claude Depamphilis, Robert Edwards, Nadeem Faruque, Robert Feldman, Jack Gilbert, Paul Gilna, Frank Oliver Glöckner, Philip Goldstein, Robert Guralnick, Dan Haft, David Hancock, Henning Hermjakob, Christiane Hertz-Fowler, Phil Hugenholtz, Ian Joint, Leonid Kagan, Matthew Kane, Jessie Kennedy, George Kowalchuk, Renzo Kottmann, Eugene Kolker, Saul Kravitz, Nikos Kyrpides, Jim Leebens-Mack, Suzanna E. Lewis, Kelvin Li, Allyson L. Lister, Phillip Lord, Natalia Maltsev, Victor Markowitz, Jennifer Martiny, Barbara Methe, Ilene Mizrachi, Richard Moxon, Karen Nelson, Julian Parkhill, Lita Proctor, Owen White, Susanna-Assunta Sansone, Andrew Spiers, Robert Stevens, Paul Swift, Chris Taylor, Yoshio Tateno, Adrian Tett, Sarah Turner, David Ussery, Bob Vaughan, Naomi Ward, Trish Whetzel, Ingio San Gil, Gareth Wilson, Anil Wipat
United States Department of Energy: Publications
With the quantity of genomic data increasing at an exponential rate, it is imperative that these data be captured electronically, in a standard format. Standardization activities must proceed within the auspices of open-access and international working bodies. To tackle the issues surrounding the development of better descriptions of genomic investigations, we have formed the Genomic Standards Consortium (GSC). Here, we introduce the minimum information about a genome sequence (MIGS) specification with the intent of promoting participation in its development and discussing the resources that will be required to develop improved mechanisms of metadata capture and exchange. As part of its …
Genomics: Gtl 2008 Strategic Plan, Sharlene Weatherwax
Genomics: Gtl 2008 Strategic Plan, Sharlene Weatherwax
United States Department of Energy: Publications
Table of Contents:
Mission-Inspired Science
GTL Concept and History
National Academy of Sciences Evaluation of GTL Program
GTL’s Fundamental Research Approach to Its Mission
Hallmarks of the GTL Research Approach
Multiscale Explorations
Office of Biological and Environmental Research User Facilities
Metamethods: Metagenomics and Metaproteomics
Robust Computational Framework for GTL Research
GTL Information and Data Sharing Policy
Elaboration of GTL Science for DOE Missions
Systems Biology for Energy Solutions
Systems Biology for Understanding the Carbon Cycle
Planet-Transforming Microbes
Systems Biology for Understanding Contaminant Transport in the Environment
Microbe-Mineral Interface in Contaminated Environments
DOE Office of Science
DOE Office of Biological and …
Cyanobacterial Harmful Algal Blooms: Chapter 31: Ecosystem Effects Workgroup Report, John Fournie, Elizabeth Hilborn, Geoffrey Codd, Michael Coveney, Juli Dyble, Karl Havens, Bas Ibelings, Jan Landsberg, Wayne Litaker
Cyanobacterial Harmful Algal Blooms: Chapter 31: Ecosystem Effects Workgroup Report, John Fournie, Elizabeth Hilborn, Geoffrey Codd, Michael Coveney, Juli Dyble, Karl Havens, Bas Ibelings, Jan Landsberg, Wayne Litaker
United States Environmental Protection Agency: Publications
Harmful cyanobacterial blooms represent one of the most serious ecological stressors in lakes, rivers, estuaries and marine environments. When there are persistent or frequent blooms with high biomass of cyanobacterial cells, colonies or filaments in the water, a wide range of impacts on the ecosystem may occur. These are well established in the scientific literature and are summarized in Paerl et al. (2001). Blooms may shade the water and thereby inhibit growth of other primary producers including phytoplankton, benthic algae and vascular plants and may elevate pH, particularly in poorly buffered waters. High population densities of large cyanobacteria interfere with …
Cyanobacterial Harmful Algal Blooms: Chapter 1: An Overview Of The Interagency, International Symposium On Cyanobacterial Harmful Algal Blooms (Isoc-Hab): Advancing The Scientific Understanding Of Freshwater Harmful Algal Blooms, H. Kenneth Hudnell, Quay Dortch, Harold Zenick
Cyanobacterial Harmful Algal Blooms: Chapter 1: An Overview Of The Interagency, International Symposium On Cyanobacterial Harmful Algal Blooms (Isoc-Hab): Advancing The Scientific Understanding Of Freshwater Harmful Algal Blooms, H. Kenneth Hudnell, Quay Dortch, Harold Zenick
United States Environmental Protection Agency: Publications
There is growing evidence that the spatial and temporal incidence of harmful algal blooms is increasing, posing potential risks to human health and ecosystem sustainability. Currently there are no US Federal guidelines, Water Quality Criteria and Standards, or regulations concerning the management of harmful algal blooms. Algal blooms in freshwater are predominantly cyanobacteria, some of which produce highly potent cyanotoxins. The US Congress mandated a Scientific Assessment of Freshwater Harmful Algal Blooms in the 2004 reauthorization of the Harmful Algal Blooms and Hypoxia Research and Control Act. To further the scientific understanding of freshwater harmful algal blooms, the US Environmental …