Digital Commons Network^™

Interdigitated Gear-Shaped Screen-Printed Electrode Using G-Pani Ink For Sensitive Electrochemical Detection Of Stress Related Hormones Dopamine And Cortisol, Pritu Parna Sarkar

Theses and Dissertations

This research introduces a novel interdigitated gear-shaped graphene-based electrochemical biosensor for the simultaneous detection of dopamine (DA) and cortisol. Modified with graphene–polyaniline (G–PANI) conductive ink, the sensor increased active surface area—94.52% and 57% higher than Metrohm DropSens 110 and circular printed sensors, respectively. Scanning Electron Microscopy (SEM), Fourier Transform Infrared (FTIR) Spectroscopy and X-ray diffraction (XRD) were employed for physicochemical characterization. The sensor detects dopamine and cortisol over a linear range of 0.1–100 µM, with limits of detection of 0.043 µM (R² = 0.98) and 0.0577 µg/mL (R² = 0.976), respectively, in phosphate-buffered saline (PBS) using redox probe. Electrochemical performance …

Effectiveness Of Electrosynthesized Hydrogen Peroxide In Urease Inactivation For Stabilization Of Source-Separated Urine To Recover Urea, Brooke E. Covert

All Theses

The practice of separating urine at a building scale, rather than mixing with domestic wastewater to be treated at water resource recovery facilities, allows for concentrated urine to be directly treated with the aim of resource recovery. However, source separation and treatment present challenges during separation, storage, and transport. This study evaluated the use of hydrogen peroxide-producing electrochemical cells, which represent a technology that uses electricity as an input, to stabilize urine through cathodically produced peroxide to enable downstream water and nutrient recovery. The electrochemical cells have been previously shown to stabilize urine with electrochemically produced peroxide as an effective …

Effect Of Cigarette Smoke Extract And Nutrient Deficiency On Energy Metabolism And Biosynthesis: An In Vitro Intervertebral Disc Explant Culture Study, Avery E. Madden

All Theses

Low back pain consistently ranks among the leading causes of disability worldwide, with degenerative changes in spinal intervertebral discs (IVDs) recognized as a key contributor. Degeneration arises from the disruption of mechanical and biological cues within the disc’s cartilaginous tissue, often exacerbated by aging or injury. In recent decades, cigarette smoking has also been identified as a significant risk factor, as IVD degeneration is more prevalent among individuals with a history of smoking. Smoke inhalation is thought to promote degeneration both directly, by exposing cells to water-soluble toxic chemicals in smoke; and indirectly, through nutrient deficiency resulting from vasoconstriction and …

Biological Hydrogen Process Improvements By High Temperature Simultaneous Saccharification And Fermentation, Frank W. Jeffries V

All Theses

The hyperthermophilic bacterium Thermotoga neapolitana is established as a versatile organism for fermentative hydrogen (H₂) production. Batch experiments were carried out to investigate the cell yield, product yield, and kinetic parameter values for individual media containing five carbohydrates. The highest H₂ yield of 15.56±0.31 mmol-H₂/g-carbohydrate was reported for glucose medium. H₂ yield was measured to be 14.51±0.38, 14.44±1.15, 11.88±0.84, and 11.53±0.73 mmol/g for media containing xylose, cellobiose, arabinose and xylan respectively. Acetic acid yield followed a similar trend, where the obtained values were 0.470±0.01, 0.462±0.04, 0.431±0.01, 0.409±0.03, and 0.406±0.01 g-acid/g-carbohydrate for glucose, cellobiose, xylose, …

Development Of A Machine Learning Framework For An Irrigation Decision Support System, Eric Wilkening, Derek M. Heeren, Yeyin Shi, Laila A. Puntel, Guillermo R. Balboa, Abia Katimbo, Kuan Zhang, Precious Nneka Amori, Bruno Lena

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Currently used irrigation scheduling techniques often require significant human intervention and are time consuming, particularly for variable rate irrigation. This research aimed to develop a conceptual framework that incorporates disparate data sources leveraging both mechanistic and machine learning (ML) approaches. The overarching objective is to utilize the growing availability of data and technology to manage irrigation more precisely, which will minimize negative impacts of irrigation on our water resources. An initial irrigation machine learning model was proposed and tested in this study as a key component of an edge-cloud computing and federated learning decision-making framework. The specific objectives were (1) …

Curved Confinement Directs Anchoring-Mediated Structural Transitions In Highly Chiral Liquid Crystal Shells, Sepideh Norouzi, Jeremy Money, Stiven Villada-Gil, José Martínez-Gonález, Monirosadat Sadati

Faculty Publications

Cholesteric liquid crystals (CLCs) confined in curved geometries exhibit a rich spectrum of defectmediated morphologies governed by the interplay between chirality, curvature, surface anchoring, and confinement. This study systematically investigates structural transitions in highly chiral CLC shells under asymmetric anchoring conditions, focusing on the effects of shell thickness and curvature on pitch axis reorientation and defect formation. Utilizing microfluidic techniques, we generate core–shell droplets with independently tunable anchoring at inner and outer aqueous interfaces. Transitioning from planar–planar to planar-homeotropic boundary conditions via surfactant-mediated modulation induces profound reorganizations in the director field, giving rise to focal conic domains (FCDs), stripe patterns, …

Axicons For Improved Resolution And Depth Of Focus In Adaptive Optics Scanning Light Ophthalmoscopy, Ruth E. Woehlke, Robert F. Cooper

Biomedical Engineering Faculty Research and Publications

Adaptive optics scanning light ophthalmoscopes are instrumental for studying the eye, yet they use truncated Gaussian illumination and are limited by diffraction, restricting resolution and depth of focus (DOF). Non-diffractive Bessel beams have emerged as an alternative. Here, we use two axicons configured as: (1) an extended DOF beam for resolving multiple retinal layers; and (2) an annular beam for increasing lateral resolution. We compare both approaches to truncated Gaussian illumination using a variety of metrics. Using Configuration 1, we successfully observed multiple retinal layers simultaneously. Using Configuration 2, we observed enhanced lateral resolution but decreased signal-to-noise ratio.

Designing Self-Healable Aromatic Copolymers And Olefinic Composites, Samruddhi Yashwant Gaikwad

All Dissertations

Self-healing polymers capable of recovering from mechanical damage are promising materials for advanced applications, especially those involving mechanical and/or physical fatigue. In these studies, we have developed techniques to achieve autonomous self-healing in commodity Styrene/n-butyl acrylate copolymers. The mechanism of self-healing in the designed polymers involves inter-and/or intrachain non-covalent interactions between π-cloud and polar linkages of acrylic nBA in random/preferentially alternating copolymers. A combination of spectroscopic tools, thermo-mechanical analysis, and molecular dynamics (MD) simulations has been used to elucidate the mechanism of self-healing. These studies further show the incorporation of dipolar C-F groups to understand the effect of having fluorinated …

Synthesis And Characterization Of Magnetic Nanoparticles To Study Effective Magnetic Anisotropy For Biomedical And Catalytic Applications, Alexander Malaj

All Dissertations

This dissertation focuses on understanding how to tune the magnetic properties of nanoparticles through controlling the effective magnetic anisotropy (Keff), which is a key variable in determining a nanoparticle’s Néel relaxation time, which will dictate its magnetic behavior in various applications. In this work, magnetocrystalline anisotropy is tuned by synthesizing tri-metallic substituted ferrite (Fe3-x-yMnxCoyO4) nanoparticles with specific metallic compositions that were informed by computer simulations using density functional theory (DFT) to target magnetocrystalline anisotropy values. A drip synthesis was used to control the size and composition of the tri-metallic ferrites, which were revealed to be monodisperse and compositionally mixed by …

Synthesis, Structural Characterization And Optical Studies Of Silver-Indium-(Zinc)-Chalcogenide Fluorescent Quantum Dots, Sujal Acharya

Graduate Theses and Dissertations

Developing a non-toxic, high-performance fluorescent nanomaterial is crucial for overcoming the environmental and health restrictions of current cadmium, and lead based quantum dots (QDs), which limit the application of quantum dots in optoelectronics and bioimaging. In this thesis, we synthesized environmentally friendly AgInS2 QDs by a colloidal method, systematically altering the In/Ag precursor ratio from 2 to 6 to study the impact on their optical and photophysical properties. Our goals were to find the optimal stoichiometry for maximum quantum efficiency and stability. We also investigated further improving optical and photophysical properties through shelling with ZnS. The emission spectra appeared broad, …

Synergistic Enhancement Of Tribological Behavior And Colloidal Stability In Cuo Nanolubricants Via Ligand Tuning, Sherif Elsoudy, Sayed Akl Akl Dr, Sayed Akl A. Akl Dr, Esm Lane, Abas Hadawey, Philip D. Howes

Mechanical Engineering

Nanoparticle-based lubricants, or nanolubricants, can exhibit superior tribological properties compared to unmodified base oils. However, these performance gains are highly dependent on the nanoparticle surface chemistry, particularly in maintaining stable colloidal dispersions. This study explores the influence of oleic acid (OA) and oleylamine (OAm) functionalization on the tribological and colloidal properties of CuO nanoparticles dispersed in an SAE 20W50 base oil. We present a hybrid optimization framework combining Response Surface Methodology (RSM) with Bayesian Optimization (BO) to identify the optimal OA to OAm ratio (OA–OAm) for CuO nanolubricants. Unlike prior studies that employed either RSM alone or trial-and-error approaches, this …

Microstructural Investigation Of Graphene Reinforced Nickel Aluminum Bronze Prepared Via Laser Powder Bed Fusion, Wen Qian, Maxwyll Mcconnell, Jazmin Ley, Luke Schwaninger, Xin Chen, Bai Cui, Joseph A. Turner

Mechanical Engineering Faculty Publications

Nickel aluminum bronze (NAB) powders coated with reduced graphene oxide (RGO) were successfully fabricated using additive manufacturing (AM) via laser powder bed fusion. The resulting samples were characterized using a suite of complementary techniques, including x-ray diffraction, scanning electron microscopy, energy-dispersive x-ray spectroscopy, nanoindentation, x-ray computed tomography, and electron backscatter diffraction. These methods were employed to reveal the micro- and nanoscale features within the fine dendritic microstructure. The as-fabricated microstructures were observed to deviate significantly from typical as-cast configurations. In the AM RGO-coated NAB specimens, the formation of the κ_I phase was notably suppressed and is attributed to the …

Drift Dynamics Of Early Life-Stage Invasive Carps, Saurav Karki

Department of Civil and Environmental Engineering: Dissertations, Theses, and Student Research

Asian carp species pose significant ecological threats to North American freshwater systems due to their invasive nature and prolific reproduction. Their semi buoyant eggs develop while drifting downstream with the river current. Understanding early life-stage transport is therefore critical for predicting recruitment potential and guiding management efforts. Existing fluvial egg drift models, including those relying on 1-D hydraulics and fully 3-D CFD-based models, are either inadequate for complex braided rivers or too computationally demanding for large-scale application. The Platte River in Nebraska, characterized by wide, shallow, multi-threaded channels, is dominated by two-dimensional flow conditions, making a depth-averaged 2-D modeling approach …

Development And Evaluation Of Supported Ionic Liquid Membrane And Porphyrin Frameworks For Carbon Capture Separation, Sarang Ismail

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

The global urgency to mitigate anthropogenic CO₂ emissions has intensified the pursuit of energy-efficient separation technologies. Supported Ionic Liquid Membranes (SILMs) have emerged as promising candidates for CO₂ capture due to their tunable solubility-selectivity and low energy requirements. However, challenges such as mechanical instability, limited scalability, and trade-offs in transport performance have impeded their widespread adoption.

This thesis explores a systematic approach to designing and optimizing SILMs for enhanced CO₂ separation by tailoring polymer–ionic liquid interactions, processing conditions, and material architectures. A comprehensive set of studies were conducted using poly(vinylidene fluoride) (PVDF) with varying molecular weights, different grades of PEBAX®, …

Anisotropic Object-Based Shifts Of Attention Arise From Unequal Influences Of Visual Field Meridians On Neural Attention Gradients, David H. Hughes, Adam J. Barnas, Adam S. Greenberg

Biomedical Engineering Faculty Research and Publications

Object-based attention prioritizes the processing of information appearing within a selected object. We previously showed an object-based shift direction anisotropy (SDA) whereby horizontal shifts are more efficient than vertical shifts (Barnas AJ, Greenberg AS. Atten Percept Psychophys 78: 1985–1997, 2016; Barnas AJ, Greenberg AS. Vis Cogn 27: 768–791, 2019), an effect modulated by the visual field meridians (Barnas AJ, Greenberg AS. Q J Exp Psychol (Hove) 77: 2516–2532, 2024). Our present aim was to understand how the functional brain mechanisms of attention give rise to the SDA. We hypothesized that the SDA arises from attentional resources being partitioned differently by …

Computational Modeling For Automatic Superconducting Cavity Fault Prediction And Classification Using Time Series Signals, Md Monibor Rahman

Electrical & Computer Engineering Theses & Dissertations

Processing multivariate time series signals collected from sensor networks is challenging because of complex temporal dependencies and non-stationarity. With the advent of artificial intelligence (AI) like machine learning and deep learning, it has become possible to process sensor-driven time series data more effectively than traditional statistical methods.

This dissertation aims to develop machine learning and deep learning models to address machine fault diagnosis using multivariate time series signals collected from the Continuous Electron Beam Accelerator Facility (CEBAF) at Jefferson Lab. The first goal of the proposed work is to develop deep learning–based classification models and an unsupervised fault clustering approach …

Two Analytic Issues Arising From Models In Probability And Materials Science, Giang Vu Thanh Nguyen

Mathematics & Statistics Theses & Dissertations

This dissertation explores two distinct topics centered on mathematical models in probability theory and materials science. The first part investigates a series of functions derived from an adaptive algorithm designed to address the score-based secretary problem, a classic challenge in probability theory. This problem involves making immediate decisions to select the best candidate from a sequence of interviews. The algorithm aims to maximize the probability of selecting the optimal candidate based on observed scores. We prove two fundamental analytic properties of this sequence of functions as a theoretic support of the algorithm: first, the functions in the sequence each possess …

Systems Statistical Engineering – Hierarchical Fuzzy Constraint Propagation, Hengameh Fakhravar

Engineering Management & Systems Engineering Theses & Dissertations

Driven by the growing need in the 21st century for integrating rigorous statistical analysis into engineering research, there is a movement to develop an integrated statistical engineering science within statistics and quality communities (Hoerl & Snee, 2010; Anderson-Cook et al., 2012). Systems Statistical Engineering research seeks to integrate the Causal Bayesian hierarchical modeling (Pearl, 2009) and cybernetic control theory within Beer’s Viable System Model (1972, 1979, 1985) and the Complex Systems Governance framework (Keating, 2014; Keating & Katina, 2015, 2016) to produce multivariate systemic models for robust dynamic systems mission performance. Cotter & Quigley (2018) set forth the Bayesian systemic …

A Strict Physicality-Preserving Scheme For A 2d Q-Tensor Flow With A Singular Potential, Md Mashud Parvez

Mathematics & Statistics Theses & Dissertations

Nematic liquid crystals are a state of matter that exhibit properties between those of conventional liquids and solid crystals. Their unique ability to align molecules in specific directions makes them essential in various applications, including display technologies and advanced materials. To model their complex behavior, mathematical frameworks such as the Q-tensor model are used to describe the orientation and degree of molecular order. In this work, we introduce a numerical scheme for a two-dimensional (2D) dynamic Q-tensor model, which is formulated as an L²-gradient flow driven by the liquid crystal free energy and incorporates a singular potential to …

Towards Improving Computational Modeling Of The Lumbar Spine - Impact Of Material Properties And Laminotomy On Spinal Biomechanics, Isaac K. Kumi

Mechanical & Aerospace Engineering Theses & Dissertations

Spinal ligaments play a crucial role in maintaining the mechanical stability of the lumbar spine. These dense, collagenous tissues not only resist excessive motion but also distribute loads between spinal components to protect neural structures. Traditionally, the mechanical response of ligaments has been modeled using linear elastic assumptions, which treat the tissue as having a constant stiffness regardless of loading history. While this simplifies analysis, it fails to capture the time-dependent behaviors, such as creep, stress relaxation, and hysteresis, that are characteristic of biological tissues.

Viscoelastic modeling may provide a more physiologically accurate representation by incorporating both elastic and viscous …

Advanced Analytical Biosensing For Cancer Detection And Neural Diagnostics Using Tapered Optical Fiber (Tof), Protonic, And High Throughput Microplate –Based Technologie, Bayan Hassan Alharbi

Chemistry & Biochemistry Theses & Dissertations

This dissertation investigates the development and application of advanced biosensing technologies to enhance early disease detection, neurological diagnostics, and bioactive compound evaluation. The research spans four key areas. First, it introduces tapered optical fiber (TOF)-based plasmonic biosensors for the non-invasive detection of prostate cancer, demonstrating high sensitivity and specificity compared to conventional diagnostic methods.

Second, it explores the use of fluorescent biosensors to test the Transmembrane Electrostatically Localized Proton (TELP) theory, shedding light on the role of localized protons in neuronal signaling and energy transfer. Third, the work presents a high-throughput, microplate-based biosensing platform for analyzing mitochondrial function under nanosecond …

Inter-Cellular Forces Modulate Cell-Ecm Traction Forces, Zaria Booth

Mechanical & Aerospace Engineering Theses & Dissertations

Epithelial cells are among the most abundant cell types in the human body, making up sheets of epithelial tissues that cover the linings of organs and body cavities. Cellular adhesion and force transmission across epithelial tissues are crucial in maintaining tissue integrity and ensuring proper tissue regeneration. Defects in cellular force transmission have been found in various diseases, including cancer. Force transmission at cell-cell and cell-ECM junctions drive cell survival and development. It has been previously shown that changes in cell-ECM traction directly modulates forces at cell-cell contacts. In this study, we aim to determine the effects of perturbations in …

Population Analysis Of Cyanobacteria In Rotating Algal Biofilm Reactors, Eric H. Matthews

All Graduate Theses and Dissertations, Fall 2023 to Present

Algal biofilms have numerous applications in wastewater treatment and bioproduct production. The Sustainable Waste-to-Bioproducts Engineering Center at Utah State University is working to develop rotating algal biofilm reactors (RABRs) to remove excess nitrogen and phosphorus from wastewater effluent while producing biomass for downstream production.

Genetic analysis of algal biofilms on various RABRs was performed to gain improved understanding of the biofilm populations. This analysis focuses on a pilot-scale RABR and how it compares to several other RABRs. Additionally, old methods of genetic analysis filtered out important cyanobacterial populations. A new method was developed to identify the cyanobacteria within the biofilms. …

Precision Agriculture Applications In Tart Cherries: Yield Mapping Technologies And Remote Sensing For Water Stress Estimation, Anderson Luiz Dos Santos Safre

All Graduate Theses and Dissertations, Fall 2023 to Present

Tart cherry is an important specialty crop in the United States, particularly in Utah where the area dedicated to tart cherry cultivation is larger than any other fruit grown in the state. However, growers face increasing challenges due to rising land prices, limited water availability, and extreme weather events. These factors make it essential to adopt new technologies that improve efficiency and sustainability. Precision agriculture, which uses data-driven tools to manage crops more effectively, can help address these challenges. However, most tart cherry orchards still rely on traditional practices due to a lack of specialized technologies for this crop. This …

A Provable Semi-Infinite Programming Approach For Solving Dynamic Nash Games, Tyler C. Gardner

All Graduate Theses and Dissertations, Fall 2023 to Present

Many engineering problems must account for the non-cooperative decisions and actions of multiple players. These problems can be modeled within a game-theoretic framework. The approach herein is to model problems as Nash games, convert them to semi-infinite programs, and leverage provable semi-infinite algorithms to solve the original problem. A particular algorithm that leverages off-the-shelf solvers is used to solve four low-dimensional benchmark problems successfully. Two types of linear quadratic dynamic games are then investigated: ones where each player’s problem is convex and ones where at least one player’s problem is nonconvex. Within each type, variations based on information structure, communication …

Evaluating Cyanotoxins In Surface Water And Aerosols Near Utah Lake, Dylan R. Mcpeake

All Graduate Theses and Dissertations, Fall 2023 to Present

Utah Lake is a freshwater lake in Utah County near Provo, Utah. It is the third- largest lake in Utah and is important for recreation and local businesses. However, from June to October, the lake often has cyanobacteria harmful algal blooms (cHABs), which contain a toxin called cyanotoxin. These toxins can be dangerous to people who come into contact with the water. Government agencies regularly check for cHABs and warn people when the water is unsafe for activities like swimming. Collecting water samples to test for cHABs can be risky because it can possibly result in direct contact with the …

Optimization And Utilization Of Microbial Electrolysis Cells In Waste To Product Applications, Hayden Harrison

All Graduate Theses and Dissertations, Fall 2023 to Present

As the world searches for cleaner and more sustainable energy solutions, turning waste into fuel is an increasingly attractive strategy. This research focuses on microbial electrolysis cells, a new technology that uses bacteria and a small amount of electricity to convert organic waste—like food scraps or wastewater—into useful gases such as hydrogen and methane. These gases can be used as energy sources to reduce dependency on more traditional fuels.

This thesis tackles two key challenges that limit the real-world use of microbial electrolysis systems. First, it introduces a simpler and more effective method to stop hydrogen losses in single-chamber cells. …

Mathematical Modeling Of Effects Of Tumor Location On Lung Function., Lamargaret Temukisa Johnson

Master of Engineering Theses

Lung cancer has the highest rates of incidence and mortality of all cancers. Most lung cancer tumors are Non-Small Cell Lung Cancer (NSCLC). NSCLC patients with lesions in the upper lobes are found to have better prognosis compared to those with lesions in the middle and lower lobes. Previous studies have suggested various causes for this discrepancy at both the organ-scale and tissue-scale. To model NSCLC growth in different locations within the lung, an organ scale lung model and tissue scale tumor model were coupled through the tissue pressure, and oxygen and carbon dioxide partial pressures. The coupling was used …

Techno-Economic Analysis (Tea) And Life-Cycle Assessment (Lca) Of Sustainable Aviation Fuel (Saf) Production Through Circular Economy (Ce) Practices: A Focus On Supply Chain Optimization And Policy Implications, Edmund Gyandoh

Chemical and Biological Engineering ETDs

This study provides a comprehensive systems-level evaluation of an integrated circular biorefinery for sustainable aviation fuel (SAF) production. Employing supply chain optimization, technoeconomic analysis, lifecycle analysis, policy modeling, and multicriteria decision analysis, the research assesses technical feasibility, economic viability, and environmental performance. The circular economy model demonstrates exceptional resource efficiency, achieving a 92.3% overall circularity score with strong material recycling, water reuse, waste minimization, and near-complete energy recovery, resulting in net-negative carbon emissions and net energy export. Scaling the facility to commercial capacity (500 million liters per year) enables significant economic improvements. The minimum fuel selling price (MFSP) decreases from …

Coal Mining Reclamation: Lessons Learned From Tropical And Subtropical Countries, Priyaji Agung Pambudi, Suyud Warno Utomo, Roni Setyo Handoko

Journal of Environmental Science and Sustainable Development

This study addresses the persistent environmental challenges associated with coal mining in tropical and subtropical regions, where complex microclimates and ecological variability hinder effective reclamation. Despite the increasing global coal demand, comparative cross-country insights remain limited. This research fills the gap by evaluating the best practices. This study employs a qualitative methodology with a comparative case study design, uses systematic literature review to evaluate ecology based reclamation policies and implementation practices. Data were sourced from peer-reviewed journals from Scopus and the Web of Science database and institutional reports, and analyzed using McHarg’s landscape ecology theory to evaluate reclamation policies, ecological …