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Naturally-Derived Molecular Ensembles In Medicine, Materials Science And Evolutionary Biology: An Interdisciplinary Study, Silvio Panettieri

Dissertations, Theses, and Capstone Projects

The first chapter will introduce the work carried out in collaboration with the Govind laboratory at CCNY. Our quest was set forth to investigate the intimate relationship lying between chronic inflammation and tumor development. For at least the last fifteen years much research has been conducted on this topic; yet, the level of complexity arising from exceedingly interwoven biochemical pathways in mammals has resulted in slow advancements in this field. This is why we resorted to a simple yet powerful immunogenetic model organism, the fruit fly Drosophila melanogaster, in combination with the administration of the most common anti-inflammatory drug, …

Floristic Response To Urbanization: Filtering Of The Bioregional Flora In Indianapolis, Indiana, Usa, Rebecca W. Dolan, Myla F.J. Aronson, Andrew L. Hipp

Biological Sciences

PREMISE OF THE STUDY: Globally, urban plant populations are becoming increasingly important, as these plants play a vital role in ameliorating effects of ecosystem disturbance and climate change. Urban environments act as filters to bioregional flora, presenting survival challenges to spontaneous plants. Yet, because of the paucity of inventory data on plants in landscapes both before and after urbanization, few studies have directly investigated this effect of urbanization.

METHODS: We used historical, contemporary, and regional plant species inventories for Indianapolis, Indiana USA to evaluate how urbanization filters the bioregional flora based on species diversity, functional traits, and phylogenetic community structure. …

Intrapopulation Diversity In Isotopic Niche Over Landscapes: Spatial Patterns Inform Conservation Of Bear–Salmon Systems, Megan S. Adams, Christina N. Service, Andrew Bateman, Mathieu Bourbonnais, Kyle A. Artelle, Trisalyn Nelson, Paul C. Paquet, Taal Levi, Chris T. Darimont

Population Distribution and Habitat Collection

Intrapopulation variability in resource acquisition (i.e., niche variation) influences population dynamics, with important implications for conservation planning. Spatial analyses of niche variation within and among populations can provide relevant information about ecological associations and their subsequent management. We used stable isotope analysis and kernel-weighted regression to examine spatial patterns in a keystone consumer–resource interaction: salmon (Oncorhynchus spp.) consumption by grizzly and black bears (Ursus arctos horribilis, n = 886; and Ursus americanus, n = 557) from 1995 to 2014 in British Columbia (BC), Canada. In a region on the central coast of BC (22,000 km² ), grizzly bears consumed …

Fishing As Therapy: Impacts On Job Satisfaction And Implications For Fishery Management, Tarsila Seara, Richard Pollnac, John J. Poggie, Carlos Garcia-Quejano, Iris Monnereau, Victor Ruiz

Biology and Environmental Science Faculty Publications

"This study presents unique comparisons, across space and time, regarding aspects of fishers’ perception of their job satisfaction and well-being between two geographic areas where fishing constitutes integral part of the local economy and culture: the Northeast Region US and the Caribbean. Examining differences in aspects of job satisfaction and well-being in such highly different environments (both human and natural) will provide information for developing models to understand how different stressors (e.g. changes in the natural, socio-cultural, economic and managerial environments) affect those whose livelihoods depend directly on fishery resources. Models elucidating relationships between environmental and anthropogenic changes and the …

The Nebraska Bird Review, Volume 85 June 2017 Number 2

Nebraska Bird Review

Spring Field Report, March - May 2017, by W. Ross Silcock … 54

Greater Sandhill Crane (Antigone canadensis tabida) Copulation Detected Along the Big Bend of the Platte River, South-Central Nebraska, by Andrew J. Caven and Emma M. Brinley Buckley … 83

NOU Spring Field Days and Annual Meeting in Auburn, May 19-21, 2017, by Janis Paseka … 85-90

Subscription and Organization Information … 91

Greater Sandhill Crane (Antigone Canadensis Tabida) Copulation Detected Along The Big Bend Of The Platte River, South-Central Nebraska, Andrew J. Caven, Emma M. Brinley Buckley

Nebraska Bird Review

On 9 March 2017 at 0805 hrs, two A. canadensis tabida were observed copulating on a sandy island within the south channel of the Platte River, Hall County, Nebraska (40.790982°N, -98.404635°W, WGS84; 581 m elev.). Two biologists witnessed the copulation at a distance of about 175 m looking to the south from within an overnight viewing blind on the north bank of the south channel of the Platte River, utilizing an 80 mm spotting scope (20x60x magnification). The sequence of events previous to the copulation followed very closely the observations reported by Tacha (1988). The copulation was proceeded by the …

Pheasant Response To Lead Ingestion, Travis J. Runia, Alex J. Solem

The Prairie Naturalist

Lead is toxic to all vertebrate species and ingestion of spent lead pellets from hunting is the primary method of exposure in birds. Both acute and chronic effects occur in response to lead ingestion including death, weight loss, and reduced body function, but the effect is highly variable among species. Most research has focused on lead ingestion impacts on waterfowl, but less is known about the effects of lead ingestion by upland game such as ring-necked pheasants (Phasianus colchicus). We gavage- fed zero, one, or three lead pellets to 90 (n = 30/group) captive-raised adult hen pheasants and monitored survival …

Long-Term Changes In Canada Goose Nest Success And Nest Densities At An Iowa Wetland Complex, Brenna N. Ness, Robert W. Klaver, Guy G. Zenner

The Prairie Naturalist

Giant Canada geese (Branta canadensis maxima) were extirpated from Iowa by the early 1900s due to unregulated hunting, egg gathering, and wetland drainage in the nineteenth century (Bishop 1978). Ef- forts to reintroduce Canada geese in Iowa began in 1964 (Bishop and Howing 1972) and involved releasing flightless adults and goslings at nearly 30 sites across the state (Zenner and LaGrange 1998a). In 1972, 13 flightless pairs were released at Rice Lake Wildlife Management Area (WMA; Bishop 1978). By 1989, the breeding population of Canada geese at Rice Lake WMA had increased to 420 nesting adults (G. G. Zenner, Iowa …

Assessing Parturition Date Synchrony For North Dakota Ungulates, Eric S. Michel, Jonathan A. Jenks, William F. Jensen

The Prairie Naturalist

Reproductive parameters such as conception date, and therefore parturition date, influence offspring characteristics such as sex ratio and birth mass. For example, late-conceiving reindeer (Rangifer tarandus) produced more female than male offspring compared to those who conceived early (Holand et al. 2006). Females that conceive later and therefore give birth later also can produce lighter offspring compared to those who conceive early (Schwartz et al. 1994, Holand et al. 2006). Because birth mass is positively related to adult body mass (Michel et al. 2015), conception and parturition date likely affect adult phenotype. In turn, this may influence survival because heavy …

Notes: Examining The Potential Competitive Effects Of Ventenata Dubia On Annual And Perennial Grasses, Shawn Mckay, Lesley R. Morris, Christopher E. Morris, Elizabeth A. Leger

The Prairie Naturalist

Portions of the United States are becoming increasingly dominated by annual species, with cheatgrass (Bromus tectorum L.) and medusahead (Taeniatherum caput-medusae [L.] Nevski) as the most common and well-known invaders (Bansal et al. 2014). Other invasive annual species also are present and increasing in abundance, including ventenata (Ventenata dubia [Leers] Coss.), an invasive annual grass that has been expanding within the Pacific Northwest, Great Basin, and Great Plains regions of the United States. Ventenata was first reported in North America in 1952 in Washington (Old and Callihan 1987) and has since spread to 7 western states in the USA (CA, …

Book Reviews: American Serengeti: The Last Big Animals Of The Great Plains. Dan Flores., Daniel S. Licht

The Prairie Naturalist

Before describing what Flores’ book is, I must state what it is not. It is not a technical book designed for scholarly readers. Sources are not fully cited, and the bibliography is of limited scope. Nor is it a comprehensive book of all the megafauna of the Great Plains. Although chapters are devoted to extant species such as American bison (Bison bison), pronghorn (Antilocapra americana), and coyote (Canis latrans), there are only passing references to mule and white-tailed deer (Odocoileus hemionus and O. virginianus, respectively), elk (Cervus canadensis), and bighorn sheep (Ovis canadensis). Rather, Flores devotes chapters to grizzly bears …

Diel And Monthly Movement Rates By Migratory And Resident Female Pronghorn, Paul F. Jones, T. Andrew Hurly, Chelsea Jensen, Karl Zimmer, Andrew Jakes

The Prairie Naturalist

Animal movement patterns are variable, with certain species primarily being diurnal and others nocturnal. Pronghorn (Antilocapra americana) are regarded as diurnal animals moving predominately during daylight hours. Anecdotal accounts, however, suggest that pronghorn move during the night but the extent, frequency, and importance of these nocturnal movement behaviors are unknown. To evaluate movements, we combined global positioning system relocation data from collared female pronghorn in the Northern Sagebrush Steppe between 2003 and 2007 with sunrise/sunset data within a geographical information system platform. We assessed whether mean and maximum movement rates were influenced by diel period (dawn, day, dusk, and night), …

The Pitfalls Of Data Analysis, Christopher N. Jacques

The Prairie Naturalist

Greetings GPNSS members! I hope summer finds you well and enjoying the Great Plains in some way, whether that be starting a new field season, a long-overdue break from the office, or planning your next family vacation. For me, transitioning away from the demands of the Spring 2017 semester to data analyses and preparation of my own manuscripts are particularly exciting (well, as exciting as “office life” can be!). Over the past month, I have initiated a number of grandiose summer objectives, most of which include analysis or in some instances, re-analysis of data to address concerns raised during peer-review. …

The Prairie Naturalist: The Journal Of The Great Plains Natural Science Society Volume 49 No. 1

The Prairie Naturalist

TABLE OF CONTENTS

1 EDITOR’S NOTE

RESEARCH ARTICLES

3 Diel and Monthly Movement Rates by Migratory and Resident Female Pronghorn Paul F. Jones, T. Andrew Hurley, Chelsea Jensen, Karl Zimmer, and Andrew Jakes

13 Pheasant Response to Lead Ingestion Travis J. Runia and Alex J. Solem

NOTES

19 Examining the Potential Competitive Effects of Ventenata dubia on Annual and Perennial Grasses Shawn McKay, Lesley R. Morris, Christopher E. Morris, and Elizabeth A. Leger

23 Adult Red-Headed Woodpecker Interaction with Bullsnake After Arboreal Nest Depradation Brittany J. Yohannes and James L. Howitz

26 Breeding Trumpeter Swans in Northeastern North Dakota Mark …

Descriptions, Notes And Reassignments In Neoibidionini (Coleoptera: Cerambycidae: Cerambycinae) With A New Genus, Three New Species And Keys To Species Of Brechmoidion Martins, 1969, Compsibidion Thomson, 1864 And Rhysium Pascoe, 1866, Antonio Santos-Silva, Maria Helena M. Galileo, James E. Wappes

Insecta Mundi

Chiquitano gen. nov. Chiquitano volcanesensis sp. nov., Compsibidion achiraensis sp. nov. and Compsibidion amboroensis sp. nov. (Coleoptera: Cerambycidae: Cerambycinae: Neoibidionini) are described from Bolivia. Notes on Rhysium Pascoe, 1866 and Rhysium bimaculatum Pascoe, 1866 are provided, and Brechmoidion separatum Martins and Galileo, 2007 is transferred to Rhysium. Keys to species of Compsibidion Thomson, 1864, Brechmoidion Martins, 1969 and Rhysium Pascoe, 1866 are also provided.

Nou Spring Field Days And Annual Meeting, Auburn, May 19-21, 2017, Janis Paseka

Nebraska Bird Review

The annual meeting of the Nebraska Ornithologists’ Union was held at the Senior Center in Auburn on May 19-21, 2017, and was organized by Robin Harding and Don and Janis Paseka. About 70 birders attended on a weekend that began wet but finished with more birder-friendly conditions. Our Friday evening program was a presentation by Kevin Holliday, Superintendent of Indian Cave State Park. He mentioned the park’s features including the cave and petroglyphs, St. Deroin cemetery, 22 miles of trails, Missouri River overlook and reconstructed town. He also highlighted the many events held in the park during the year, including …

Nitrogen Addition And Ecosystem Functioning: Changes In Species Composition Leaf Traits Amplify Increases In Leaf Area Index And Canopy Chlorophyll, Anna R. Tatarko

School of Biological Sciences: Dissertations, Theses, and Student Research

Increased nutrient inputs can cause shifts in plant community composition and plant functional traits, both of which affect ecosystem function. We studied community- and species-level changes in specific leaf area (SLA), chlorophyll, leaf thickness, leaf toughness, plant height and leaf dry matter content (LDMC) in a full factorial nitrogen (N), phosphorus (P), potassium (K) fertilization experiment in a semi-arid grassland. Nitrogen was the only nutrient addition to significantly affect leaf functional traits, and N addition increased community weighted SLA by 19%, leaf chlorophyll content by 34%, height by 26%, and resulted in an 11% decrease in LDMC while leaf thickness …

Adult Red-Headed Woodpecker Interaction With Bullsnake After Arboreal Nest Depredation, Brittney J. Yohannes, James L. Howitz

The Prairie Naturalist

Nest success rates often are higher among cavity-nesting birds than those that nest in open cups or on the ground. Among cavity-nesting birds, woodpeckers have some of the highest rates of nest success. A review of woodpecker nesting ecology across species documented nest success ranging from 0.42 to 1.00 with a median of 0.80 (n = 84 populations), and that predation was low, ranging from 0.00 to 0.35 with a median of 0.13 (n = 33 populations). The constrained opening to a cavity nest limits predation to relatively small animals or those able to break open cavity walls. …

Use Of Satellite Trap Transmitters In Capturing Mountain Lions, Randy D. Johnson, Jonathan A. Jenks, Stephanie A. Tucker

The Prairie Naturalist

The use of safe and humane methods for the capture of wild animals is imperative in wildlife research, wildlife damage management, and feral animal control. When capturing animals successfully and humanely, several items must be addressed, including animal safety, personnel safety, non-target captures, and cost (Sikes et al. 2016). Additionally, public pressures against the use of traps have led to significant changes in trapping regulations across North America and beyond (Andelt et al. 1999, Darrow and Shivik 2008) and can place research projects at risk to loss of Institutional Animal Care and Use Committee (IACUC) approval (Larkin et al. 2003). …

Breeding Trumpeter Swans In Northeast- Ern North Dakota, Mark R. Fisher, Matthew D. Sprenger, Chris R. Roed, David O. Lambeth

The Prairie Naturalist

The trumpeter swan (Cygnus buccinator) is North America’s largest waterfowl species and breeds in wetland habitats across the northern United States, Alaska and Canada. Summer observations by ornithologists, including those of John James Audubon in 1843, indicated a substantial number of trumpeter swans were breeding in North Dakota prior to European settlement. However, the species was extirpated by the late 1800s and there were no subsequent breeding records for over a century (Stewart 1975). Since 2007, 5 recent nesting records indicate that trumpeter swan has returned as a regular breeding species in North Dakota.

A continental range-wide breeding trumpeter swan …

Erratum

The Prairie Naturalist

In the June 2016 issue (48:1, page 56), the Editorial Staff inadvertently omitted corrections provided by the corresponding author prior to publication. In the second paragraph of the left column (i.e., 5 lines from the bottom), “is” should be replaced with “could be.” Similarly, in the right column (9 lines from the top), “In additional” should be replaced with “In addition.” On page 58, the following text should be placed after “institutions” in the Appendix caption: “University of Central Missouri (CMSU), Truman State University (TSU).” Lastly, within the appendix, all instances of MHP should be replaced with FHSM and “OF” …

The Population Genetics Of Morro Bay Eelgrass (Zostera Marina), Julia Gardner Harencar

Master's Theses

Seagrass populations are in decline worldwide. Zostera marina (eelgrass), one of California’s native seagrasses, is no exception to this trend. In the last 8 years, Morro Bay, California has lost 95% of its eelgrass. Eelgrass is an ecosystem engineer, providing important ecosystem services such as sediment stabilization, nutrient cycling, and nursery habitats for fish. The failure of recent restoration efforts necessitates a better understanding of the causes of eelgrass decline in this estuary. Previous research on eelgrass in California has demonstrated a link between population genetic diversity and eelgrass bed health, ecosystem functioning, and resilience to disturbance and extreme climatic …

Molecular Evolution And Phylogeography Of Mitochondrial Dna Cytochrome B Gene In Southern California Santa Ana Speckled Dace (Rhinichthys Osculus), Pia Marie Vanmeter

Electronic Theses, Projects, and Dissertations

In this study, I sequenced the mitochondrial cytochrome b gene to elucidate the extent and pattern of genetic variations among and within populations of Rhinichthys osculus (Santa Ana Speckled Dace) found in the different watersheds in Southern California, Central California Coast and Eastern California Desert. I described and analyzed the structural characteristics and pattern of base sequence substitutions in the cytochrome b gene to understand the molecular evolution of the gene. The Phylogenetic analyses showed that the Southern California Santa Ana Speckled dace is a distinct population from the Central California Coast dace population and Eastern California Desert dace population, …

The Santa Ana Speckled Dace (Rhinichthys Osculus): Phylogeography And Molecular Evolution Of The Mitochondrial Dna Control Region, James Jay Vanmeter

Electronic Theses, Projects, and Dissertations

The purpose of this genetic study of the Santa Ana Speckled Dace Rhinichthys osculus was three-fold. The first goal was to characterize the molecular structure of the mtDNA control region of R. osculus. An 1143 base-pair region of the mitochondrial DNA genome, which included the complete control region was sequenced for all individuals. Analysis of the sequence data revealed that the molecular structure of the speckled dace control region was similar to the molecular structure described for other vertebrate taxa. The speckled dace control region contains three major domains, which vary in base frequency as well as in the frequency …

Experimental Evolution With Caenorhabditis Nematodes, Henrique Teotónio, Suzanne Estes, Patrick C. Phillips, Charles F. Baer

Biology Faculty Publications and Presentations

The hermaphroditic nematode Caenorhabditis elegans has been one of the primary model systems in biology since the 1970s, but only within the last two decades has this nematode also become a useful model for experimental evolution. Here, we outline the goals and major foci of experimental evolution with C. elegans and related species, such as C. briggsae and C. remanei, by discussing the principles of experimental design, and highlighting the strengths and limitations of Caenorhabditis as model systems. We then review three exemplars of Caenorhabditis experimental evolution studies, underlining representative evolution experiments that have addressed the: (1) maintenance of genetic …

Characterizing The Impacts Of Contaminants On Fish Embryogenesis And Revealing An Alternate Molecular Mechanism Of Ahr Mediated Cardiac Defects, Corinna Singleman

Dissertations, Theses, and Capstone Projects

There is a long history of damage to natural ecosystems from environmental pollution. Many environmental contaminants are man-made and have been released with abandon over the last 100 years including dioxins, 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD), and polychlorinated biphenyls (PCBs). These chemicals act on similar cellular processes and cause skin lesions, cancer, learning disabilities and reproductive problems in many vertebrates. There are many studies exploring various aspects of TCDD and PCB exposure on model and wild organisms. Few studies however, have compared effects of PCB mixtures on ecosystems to effects of individual PCBs in the lab. The first aim of this thesis is …

A Spiny Water Flea Invasion And Effects On The Zooplankton Community In Southern Green Bay, Lake Michigan, Casey Ann Merkle

Lawrence University Honors Projects

The spiny water flea (Bythotrephes longimanus) is an invertebrate aquatic invasive species (AIS) in the Great Lakes that competes with native fish species for zooplankton, perhaps contributing to a decline of fish populations or changes in zooplankton communities in Lake Michigan. Bythotrephes produce two types of eggs, immediately hatching versus resting eggs which are tolerant to harsh conditions and allow for rapid dispersal. We determined Bythotrephes population density and population dynamics in Green Bay during the summer months of 2015 and 2016. Population dynamics were similar at both sites in Green Bay in each year, with peak population …

The Off Season: Masculinities, Rurality, And Family Ties In Alaska Commercial Fishing, Cruz Morey

Senior Theses

This study explores the intersections of masculinity, rurality, the family, and ecology through the experiences of commercial fishermen in Alaska. By understanding the plurality of masculinities and how men operate within a rural space, this study investigates the relationship between the masculine rural and the rural masculine and how that relationship pertains to commercial fishermen. This study examines existing discourse about Alaska and the masculinity of commercial fishermen in light of the concepts of cultural and economic capital, as well as local ecological knowledge (LEK). It further examines how fishermen describe their experiences in the industry as ones that are …

Notes On The Tiger Beetles (Coleoptera: Carabidae: Cicindelinae) Of Brunei Darussalam. 137. Contribution Towards The Knowledge Of Cicindelinae, Claas Damken, Jürgen Wiesner, Rodzay Abdul Wahab

Insecta Mundi

Distributional records of the 30 tiger beetle species and subspecies (Coleoptera: Carabidae: Cicindelinae) known for Brunei Darussalam are given together with habitus photos for 21 species. Neocollyris (Neocollyris) labiomaculata (Horn, 1892), Neocollyris (Neocollyris) emarginata (Dejean, 1825), Therates spectabilis fl avissimus Brouerius van Nidek, 1957, Heptodonta analis s. str. (Fabricius, 1801), Cosmodela velata (Bates, 1872), Lophyra (s. str.) fuliginosa (Dejean, 1826), Cylindera (Leptinomera) fi ligera (Bates, 1878), Myriochila (s. str.) specularis brevipennis (Horn, 1897), Abroscelis tenuipes araneipes (Schaum, 1863) and Callytron doriai (Horn, 1897) are reported for the first time for the Sultanate.

Notes On Oak-Infesting Species Of Scale Insects (Hemiptera: Coccoidea) In Korea, Soo-Jung Suh, Ah-Ram Son

Insecta Mundi

Scale insects (Hemiptera: Coccoidea) were collected on oak trees (Quercus spp.; Fagaceae) in Korea and identified as Asterodiaspis luteola (Russell) (Asterolecaniidae) and Nidularia japonica (Kuwana) (Kermesidae), which are newly documented in the Korean fauna of scale insects. Characteristics of these species are briefly given and illustrative photographs and information on their distribution and hosts are provided.