Digital Commons Network^™

Evaluating Muskellunge (Esox Masquinongy) Catch-And-Release Mortality At Elevated Summer Water Temperature, Ian Taylor Booth

Graduate Theses, Dissertations, and Problem Reports (ETD)

Angling for Muskellunge (Esox masquinongy) has become widespread and increasingly popular throughout the fish’s range. Current management strategies for Muskellunge include high minimum harvest lengths (>1016mm), closed seasons, and catch-and-release regulations. Due to these strategies and angler sentiments, up to 97% of Muskellunge caught today are released by anglers assuming they will live and be caught again in the future. Previous research on catchand-release mortality in Muskellunge has suggested relatively low mortality rates (0%-5%). However, these studies were all conducted within the fish’s thermal optimum and generally at water temperatures25°C during the summer months, representing a need to evaluate …

Population Characteristics Of Three Black Bass Species In The Upper Ohio River Drainage, Levi Foster Brown

Graduate Theses, Dissertations, and Problem Reports (ETD)

In West Virginia, species of black bass are economically and ecologically important and support popular fisheries. In the state’s large, navigable river systems, recent information suggests that anglers consider these fisheries diminished relative to their historic stocks. This study sought to describe the population characteristics of Largemouth, Smallmouth, and Spotted Bass in the upper Ohio River drainage and evaluate possible management actions. Low relative abundances coupled with poor growth estimates for Largemouth and Spotted Bass suggests that a suite of environmental and anthropogenic factors may be reducing the quality of their recreational fisheries. Conversely, demographic estimates produced for Smallmouth Bass …

Frayed Connections: How Long-Term Nitrogen Additions Disrupt Plant-Soil Interactions And The Carbon Cycle Of A Temperate Forest, Brooke A. Eastman

Graduate Theses, Dissertations, and Problem Reports (ETD)

Forests are expected to mitigate some of the negative effects of climate change by sequestering anthropogenic carbon (C) from the atmosphere, but the degree to which they drawn down C will depend on the availability of key nutrients, such as nitrogen (N). There is a fair amount of uncertainty in the future of the forest C sink, mostly owing to the fate of soil organic matter (SOM) and soil heterotrophic respiration to future conditions. In N limited systems, plants allocate a significant amount of their photosynthate belowground for the acquisition of nutrients, but under conditions of chronic N deposition, plants …

Getting To The Root Cause: The Genetic Underpinnings Of Root System Architecture And Rhizodeposition In Sorghum, Farren Smith

Graduate Theses, Dissertations, and Problem Reports (ETD)

Plants are some of the most diverse organisms on earth, consisting of more than 350,000 different species. To understand the underlying processes that contributed to plant diversification, it is fundamental to identify the genetic and genomic components that facilitated various adaptations over evolutionary history. Most studies to date have focused on the underlying controls of above-ground traits such as grain and vegetation; however, little is known about the “hidden half” of plants. Root systems comprise half of the total plant structure and provide vital functions such as anchorage, resource acquisition, and storage of energy reserves. The execution of these key …

A Phylogeny Of Antirrhinum Reveals Parallel Evolution Of Alpine Morphology, Mario Durán-Castillo, Andrew Hudson, Yvette Wilson, David L. Field, Alex D. Twyford

Research outputs 2014 to 2021

Parallel evolution of similar morphologies in closely related lineages provides insight into the repeatability and predictability of evolution. In the genus Antirrhinum (snapdragons), as in other plants, a suite of morphological characters are associated with adaptation to alpine environments.

We tested for parallel trait evolution in Antirrhinum by investigating phylogenetic relationships using restriction-site associated DNA (RAD) sequencing. We then associated phenotypic information to our phylogeny to reconstruct the patterns of morphological evolution and related this to evidence for hybridisation between emergent lineages.

Phylogenetic analyses showed that the alpine character syndrome is present in multiple groups, suggesting that Antirrhinum has repeatedly …

Stop, Then Go! Rapid Acceleration Offsets The Costs Of Intermittent Locomotion When Turning In Florida Scrub Lizards, Cheyenne Walker

College of Graduate Studies: Theses & Dissertations

Intermittent locomotion is a commonly used escape strategy with a wide array of potential benefits. Pausing may aid in locating a predator, crypsis, lowering energy costs, and avoiding obstacles. Turning may also benefit from intermittent locomotion by allowing an animal time to assess its surroundings; therefore, decreasing the chances of making a mistake and/or stumbling. Florida scrub lizards live in environments with a variety of obstacles such as turns. The goal of this study is to quantify the locomotor behavior and performance by lizards while navigating a 45° or 90° turn. Lizards were run along both a 45° and 90° …

Applying Conservation Genomic Techniques To Guide Management Of The Reticulated Flatwoods Salamander (Ambystoma Bishopi), Miranda Gaupp

College of Graduate Studies: Theses & Dissertations

The Reticulated flatwoods salamander (Ambystoma bishopi) is a federally endangered amphibian endemic to the longleaf-pine ecosystem of the southeastern U.S. This study used analyses of single-nucleotide polymorphism (SNP) data, collected from 2,255 unique individuals across 5 breeding seasons, spread across the known extant range of A. bishopi, to characterize the genetic diversity and demographics of populations, genetic relationships among populations, and patterns and spatial extents of gene flow, and to evaluate potential effects of management on A. bishopi’s resiliency. Population structure was strongly hierarchical, with individual breeding ponds (n = 38) acting as semi-connected subpopulations …

Florida Sand Skink And Blue-Tailed Mole Skink: Expanding Geographic Coverage Of Genetic Analysis For Conservation, Emma Simpson

College of Graduate Studies: Theses & Dissertations

The Lake Wales Ridge is important scrub habitat that has been increasingly altered since the post-Columbian settlement in Florida. This loss of habitat has caused extreme anthropogenic fragmentation within the Lake Wales Ridge resulting in isolation among extant scrub patches. To expand the geographic scope of previous studies and answer questions concerning population connectivity, we characterized genetic diversity and differentiation using cytochrome-b and microsatellite genetic markers for two endemic skink species: the Florida Sand Skink (Plestiodon reynoldsi) and Blue-tailed Mole Skink (Plestiodon egregius lividus). Both species display historical isolation between central and southern Lake Wales Ridge …

The Reality And Prevalence Of Animal Sentience, Antonio Damasio

Animal Sentience

Rowan et al use findings from neurobiology, clinical neurology, and general biology to argue for the extensive presence of sentience in animals, but they are wisely cautious concerning when in the phylogenetic scale that emergence occurred.

Characterizing And Predicting Beaver Pond Habitat In Kittitas County, Washington, Kylie Vroman

All Master's Theses

North American Beavers (Castor canadensis) are important ecosystem engineers in the Pacific Northwest (PNW), as they provide ecosystem services and create habitats that benefit aquatic species, watersheds, and riparian vegetation. Even though the species has been coined a “nuisance” in some settings, it is common for environmental agencies to capture beavers and relocate them to areas where it is less likely for them to cause damage. This study geospatially modeled the Kittitas County landscape to identify areas of suitable habitat. Nine existing beaver ponds in Kittitas County were investigated; three of which were prior relocation sites that had failed, three …

Male Color Badges Advertise Multiple Messages: Tradeoffs Among Color Badge Intensity, Size, And Ectoparasite Load, Katherine M. Roberts

College of Graduate Studies: Theses & Dissertations

Condition-dependent signals can be used by conspecifics to obtain information on an individuals’ quality such as health, fighting ability, or immunocompetence. Variation in the severity of parasitic infections could mediate the differential expression of sexual signals in distinct populations of the same species. This could create diverse condition-dependent relationships between signals and quality. In this study, I examine the relationship between male signal expression and quality of Sceloporus woodi that inhabit areas with distinct ectoparasitic pressures. First, I examined if the brightness or size of male signals is indicative of body size or body condition in males without ectoparasites. Second, …

Population Genomics Of Redbreast Sunfish (Lepomis Auritus): Exploring Gene Flow And Local Adaptation In A Widely Distributed Freshwater Fish, Garret J. Strickland

College of Graduate Studies: Theses & Dissertations

Little information is available concerning the distribution of genetic diversity in non-salmonid, non-imperiled, freshwater fish. In order to fill in this knowledge gap, I conducted a population genomics survey in Redbreast Sunfish (Lepomis auritus; RBS), a widespread, generalist species distributed along the Atlantic slope rivers of eastern North America. I sampled four basins (ACF, Savannah, Roanoke, and James) at eight sites each with a factorial experimental design. Sites were distributed among coastal plain, Piedmont, or mountain ecoregions in order to capture the greatest range of environmental states experienced by RBS, with the intention of finding evidence for local adaptation to …

Epigenetic Buffering In Introduced House Sparrows, M. Ellesse Lauer

College of Graduate Studies: Theses & Dissertations

Epigenetic buffering, as an environmentally induced increase in variance of epigenetic states that increases phenotypic variation to buffer populations against decreased fitness, may be a factor that resolves the genetic paradox of introduced species. DNA methylation is a molecular mechanism that could facilitate epigenetic buffering by changing in response to environmental stress. Therefore, epigenetic buffering can be detected through increased variance in DNA methylation in novel or heterogeneous environments. Introduced house sparrows (Passer domesticus) have well-documented phenotypic changes with low genetic diversity, high epigenetic diversity, and high variance in DNA methylation that provide a characteristic signature of epigenetic buffering. …

Effects Of Unpaved Roads On Relative Abundance And Epigenetics Of Early Successional Lizards, David Tevs

College of Graduate Studies: Theses & Dissertations

Unpaved roads may provide uniform microhabitat characteristics and impart edge effects in the adjacent landscape that mediate environmental pressures acting on small vertebrates. These features may allow species that are associated with recent disturbance to persist in aging forest patches. Further, epigenetic mechanisms such as DNA methylation may provide these species the phenotypic plasticity necessary to occupy multiple habitats with different environmental conditions. To understand how small vertebrates use unpaved roads, the relative abundance and occurrence of Florida scrub lizards (Sceloporus woodi) and six-lined racerunners (Aspidoscelis sexlineata) were quantified using visual encounter surveys along unpaved roads …

Sentience In Decapod Crustaceans: A General Framework And Review Of The Evidence, Andrew Crump, Heather Browning, Alex Schnell, Charlotte Burn, Jonathan Birch

Animal Sentience

We outline a framework for evaluating scientific evidence of sentience, focusing on pain experience. It includes eight neural and cognitive-behavioural criteria, with confidence levels for each criterion reflecting the reliability and quality of the evidence. We outline the rationale for each criterion and apply our framework to a controversial sentience candidate: decapod crustaceans. We have either high or very high confidence that true crabs (infraorder Brachyura) satisfy five criteria, amounting to strong evidence of sentience. Moreover, we have high confidence that both anomuran crabs (infraorder Anomura) and astacid lobsters/crayfish (infraorder Astacidea) meet three criteria—substantial evidence of sentience. The case is, …

Zebra Mussel Length-Weight Relationships Across Various Substrate Types In Lake Bemidji, Mitch Kehne

Journal of Earth and Life Science

As of November 2021, zebra mussels were confirmed in 270 Minnesotan lakes with another 232 lakes listed as infested due to their connection or proximity to where zebra mussels have been found. With lack of effective treatments to impede their spread, zebra mussels continue to colonize new areas causing ecological as well as economic harm. The goal of this study was to establish a length-weight relationship for the zebra mussel population in Lake Bemidji using shell length (SL) and wet weight (WW), as well as to assess substrate type and log transformed shell length as predictors of log transformed zebra …

Changes In The Minnesota Northern Pike Population Over The Past Thirty Years, Joey Severin

Journal of Earth and Life Science

Northern pike Esox lucius are one of the most popular game fish in Minnesota. Many anglers have noticed that northern pike seemed to decrease in size throughout much of this state. Catch per unit of effort (CPUE) drives average weight for northern pike; within lakes, as CPUE goes up average weight decreases. Decreases in size has led the Minnesota Department of Natural Resources (MNDNR) to implement new regulations on northern pike. The MNDNR noticed that not all the state has this same problem with Northern Pike, and has broken down the state into three zones, with different protected slots and …

Of Course Crustaceans Are Sentient: But There's More To The Story, Arthur S. Reber, Frantisek Baluska, William B. Miller Jr.

Animal Sentience

We are in basic agreement with Crump et al. that animal welfare, particularly with regard to the experience of pain, is a topic of importance. However, we come to the issue from a different perspective, one in which all species are sentient and can feel pain. The implications of this theory are discussed.

Experimental Elucidation Of The Life Cycle Of Drepanocephalus Spathans (Digenea: Echinostomatidae) With Notes On The Morphological Plasticity Of D. Spathans In The United States, Neely R. Alberson, Thomas G. Rosser, Tommy King, Ethan T. Woodyard, Lester Khoo, Wes A. Baumgartner, Daviod J. Wise, Linda M. Pote, Fred L. Cunningham, Matt J. Griffin

United States Department of Agriculture Wildlife Services: Staff Publications

The echinostomatid Drepanocephalus spathans (syn. Drepanocephalus auritus) parasitizes the doublecrested cormorant Phalacrocorax auritus. In North America, the marsh rams-horn snail Planorbella trivolvis and ghost rams-horn snail Biomphalaria havanensis serve as snail intermediate hosts, both of which inhabit catfish aquaculture ponds in the southeastern United States. Studies have demonstrated D. spathans exposure can be lethal to juvenile channel catfish Ictalurus punctatus. Two studies were undertaken to elucidate the life cycle of D. spathans to establish a developmental time line. In both studies, D. spathans cercariae collected from naturally infected P. trivolvis individuals were used to infect channel catfish …

Scavenging Vs Hunting Affects Behavioral Traits Of An Opportunistic Carnivore, Mitchell A. Parsons, Andrew Garcia, Julie K. Young

United States Department of Agriculture Wildlife Services: Staff Publications

Background. Human-induced changes to ecosystems transform the availability of resources to predators, including altering prey populations and increasing access to anthropogenic foods. Opportunistic predators are likely to respond to altered food resources by changing the proportion of food they hunt versus scavenge. These shifts in foraging behavior will affect species interactions through multiple pathways, including by changing other aspects of predator behavior such as boldness, innovation, and social structure. Methods. To understand how foraging behavior impacts predator behavior, we conducted a controlled experiment to simulate hunting by introducing a prey model to captive coyotes (Canis latrans) and compared their behavior …

Influence Of Landscape Attributes On Virginia Opossum Density, David A. Bernasconi, Wesley C. Dixon, Matthew T. Hamilton, James L. Helton, Richard B. Chipman, Amy T. Gilbert, James C. Beasley, Olin E. Rhodes Jr., Guha Dharmarajan

United States Department of Agriculture Wildlife Services: Staff Publications

TheVirginia opossum (Didelphis virginiana), North America's only marsupial, has a range extending from southern Ontario, Canada, to the Yucatan Peninsula, Mexico, and from the Atlantic seaboard to the Pacific. Despite the Virginia opossum's taxonomic uniqueness in relation to other mammals in North America and rapidly expanding distribution, its ecology remains relatively understudied. Our poor understanding of the ecology of this important mesopredator is especially pronounced in the rural southeastern United States. Our goal was to estimate effects of habitat on opossum density within an extensive multiyear spatial capture‐recapture study. Additionally, we compared the results of this spatial capture‐recapture …

Multidisciplinary Engagement For Fencing Research Informs Efficacy And Rancher-To-Researcher Knowledge Exchange, Matthew Hyde, Stewart W. Breck, Alex Few, Jared Beaver, Joshua Schrecengost, Jim Stone, Cameron Krebs, Russell Talmo, Kari Eneas, Rae Nickerson, Kyran E. Kunkel, Julie K. Young

United States Department of Agriculture Wildlife Services: Staff Publications

Across much of the Western United States, recovery of large carnivore populations is creating new challenges for livestock producers. Reducing the risks of sharing the landscape with recovering wildlife populations is critical to private working lands, which play an vital role in securing future energy, water, food, and fiber for an ever-expanding human population. Fencing is an important mitigation practice that many ranchers, land managers, and conservationists implement to reduce carnivore-livestock conflict. While fencing strategies have been reviewed in the literature, research seldom incorporates knowledge from the people who utilize fencing the most (i.e., livestock producers). Incorporating producers and practitioners …

The Impacts Of Maple Syrup Production On The Herbaceous Layer In Appalachian Hardwood Forests, Logan Scott Ferguson

Graduate Theses, Dissertations, and Problem Reports (ETD)

Vegetation data were collected from eight maple syrup farms (sugarbushes) and eight undeveloped maple-dominated sites to examine potential differences in understory plant communities due to disturbance effects. Understory plants were identified to the species level and percent cover of aboveground leaf-area for each species was estimated within 600 total quadrats. Overstory data and environmental data were collected to help determine if they had any effect on herbaceous-layer plant communities. Species richness, Shannon diversity, and Pielou’s evenness were calculated, with the analysis showing no significant differences between the site types. The absolute cover of plant functional groups was also compared between …

Table Of Contents

Human–Wildlife Interactions

This is the table of contents.

Trico: A Novel Repellent For Preventing Deer Damage To Ornamental Shrubs, Paul D. Curtis, Brian C. Eshenaur

Human–Wildlife Interactions

Homeowners whose landscape plants are repeatedly browsed by white-tailed deer (Odocoileus virginianus; deer) desire repellent products that are effective and long-lasting. We conducted a 12-week trial from January 6 through April 5, 2021 to test the duration and efficacy of a novel deer repellent (Trico®) relative to Plantskydd®, a commonly used deer repellent, and untreated plants. We placed treated and control Japanese yew shrubs (Taxus media ‘Hicksii’) at 4 homeowner sites (Birch Hills Drive, Fairview Crescent, Pinegrove Ave., and St. Paul Blvd.) near Rochester, New York, USA, where we detected deer presence. Yews are frequently eaten …

Monograph Reduced Box Price: Managing Human–Deer Conflicts

Human–Wildlife Interactions

Order form for HWI monograph, Methods for Managing Human–Deer Conflicts in Urban, Suburban, and Exurban Areas. This monograph identifies challenges and benefits associated with many human–deer conflict mitigation actions as well as methods to monitor the response of deer populations to management actions. Deer exploit urban, suburban, and exurban areas where human populations provide anthropogenic attractants, either intentionally or inadvertently, which often leads to human–deer conflicts. Mitigating actions have varying degrees of efficacy and may not be effective or accepted in every situation. Wildlife and municipal managers must work together to seek methods to reduce attractants, mitigate conflicts, and perpetuate …

Table Of Contents

Human–Wildlife Interactions

This is the table of contents.

Stakeholder Knowledge And Perceptions Of Free-Roaming Equids And Their Management At A Western U.S. Land-Grant University, Hollee S. Wood, S. Nicole Frey, Terry A. Messmer

Human–Wildlife Interactions

The horse (Equus ferus caballus), originally native to North America, became extinct on the continent approximately 10,000 years ago. Horses that migrated from North America to Eurasia across the Bering Strait continued to evolve and were domesticated along with burros (E. asinus). Both species were then transported to the Americas where they were intentionally released or escaped into the wild, forming feral herds. The Wild Free-Roaming Horses and Burros Act of 1971 (WFRHBA) provided federal oversight and protection for feral horses and burros (hereafter, free-roaming equids) that inhabited designated areas on public lands in the western …

Hwi Monograph Series

Human–Wildlife Interactions

The HWI Monograph Series includes open access publications on wild pigs, black bears, deer, and a forthcoming title on free-ranging domestic cats.

Join The Email List

Human–Wildlife Interactions

How to join the email list for HWI. Be the first to know about our newest publications.