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Integrative Revision Of Five Genera Type Species For Zoanthidea To Bridge The Parataxonomy Gap, Jacob Colbert

All HCAS Student Capstones, Theses, and Dissertations

Cnidarian order Zoanthidea is a relatively understudied group of invertebrates inhabiting a diverse range of marine habitats. Over/During the last two decades, species descriptions within this order have largely been based on a novel molecular parataxonomic system that relies almost exclusively on DNA barcodes to detect and describe new species. DNA barcodes are short, conserved sequences that are readily compared across taxa and used to detect previously described species. The existing taxonomic system, based on anatomical analysis and the identification of evolutionarily informative characters for phylogenetic inference, has been recently replaced by molecular parataxonomy by some scientists/researchers. While molecular sequence …

Worldwide Distribution Of Cave-Dwelling Chelodesmidae (Diplopoda, Polydesmida), Rodrigo Salvador Bouzan, Jackson C. Means, Kaloyan Ivanov, Rodrigo L. Ferreira, Antonio Domingos Brescovit, Luiz Felipe Moretti Iniesta

International Journal of Speleology

Chelodesmidae is one of the most species rich families within the Myriapoda. However, little is known regarding their association with caves. We provide a list of all Chelodesmidae taxa reported from caves, map their worldwide distribution, and discuss the troglomorphic features of the group. A total of 25 species and subspecies from 20 genera and 2 subfamilies have been recorded from 59 caves and cave systems in 11 countries. These numbers represent a surprisingly modest proportion (~3%) of the approximately 800 described species in the family. Records of cave-dwelling chelodesmids appear to be geographically biased with most taxa reported from …

Genetic Variation Among Populations Of, And Evidence Of Deep Divergence Within, The Rio Grande Chirping Frog, Eleutherodactylus Campi (Anura: Eleutherodactylidae), Kebede Beshera, Avery A. Williams Mr., John A. Hamlin Dr., Peter J. Bergeaux Mr., Christian C. Morgan Dr., Aubrey N. Armstrong Ms.

Faculty Publications

Herein we report the first molecular assessment of intra-species genetic variation and interrelationships within the Rio Grande Chirping frog, Eleutherodactylus campi. We analyzed 548 base pairs of 16S rRNA gene for 71 ingroup individuals belonging to the genus Eleutherodactylus (including 42 E. campi sampled from 15 localities in the United States and Mexico) and four outgroup samples. By unveiling two highly divergent and geographically structured clades within E. campi this study provides a novel phylogenetic placement of E. campi populations north and south of the Rio Grande Valley as sister groups to each other. The observed level of genetic …

Guano Among Bat Species From Two Regions Shows Influence Of Geography And Diet On Bacterial Community, Rahma Ahmed, Thomas Mcelroy, Shannon Whitney, Lydia Moore

Symposium of Student Scholars

Studies of bat guano have shown that the diversity and structure of associated microbial communities can be related to factors such as host phylogeny, life history and reproductive stage, geography, and diet. Many insectivorous bat species in the southeastern U.S. have generalist diets that may shift seasonally to take advantage of abundant prey species or maximize caloric intake. Seasonal shifts in prey availability or consumption should be reflected in a guano microbiome change. We also expected to detect distinct guano microbiomes within species. Within species, distinct microbial communities related to geography, and finally life history and reproductive stage. We compared …

Insect Availability And Parental Care Behavior In A Common Bird, Cole Bourque

Symposium of Student Scholars

Populations of aerially insectivorous birds are declining throughout North America. Urbanization may indirectly contribute to this decline through its negative effects on populations of insects, an important food source in insectivores' diets, where low insect availability may be especially challenging for birds during breeding. How fluctuations in insect populations impact various species at higher trophic levels is an important area of current study for future conservation biology. Here, we examine whether nestling provisioning, brooding and guarding behaviors in a breeding bird—the European starling (Sturnus vulgaris)—may be altered depending on the relative insect availability in the environment. We found …

Preliminary Analysis Of The Effects Of Non-Target Supplemental Feeding On Camera Trap Captures Of Small Mammals In Central Georgia, Raena Mccown, Travis Cunningham, Alfred J. Mead

Georgia Journal of Science

Supplemental bird feeding is a widespread hobby throughout western culture. Although it brings joy to many people, bird feeding has been shown to have potentially negative effects on local bird populations and small mammalian species. To study the differences in local occurrence of native small mammalian species around bird feeders and in more distant settings, six camera traps were placed in a rural residential area in Putnam County, Georgia. Three cameras were placed facing bird feeders and three placed a minimum of 60 m away from the feeders. Species presence was recorded three days a week from 12:00 am Monday …

Exposure Of Egyptian Rousette Bats (Rousettus Aegyptiacus) And A Little Free-Tailed Bat (Chaerephon Pumilus) To Alphaviruses In Uganda, Rebekah C. Kading, Erin M. Borland, Eric C. Mossel, Teddy Nakayiki, Betty Nalikka, Jeremy P. Ledermann, Mary B. Crabtree, Nicholas A. Panella, Luke Nyakarahuka, Amy T. Gilbert, Julian C. Kerbis-Peterhans, Jonathan S. Towner, Brian R. Amman, Tara K. Sealy, Barry R. Miller, Julius J. Lutwama, Robert M. Kityo, Ann M. Powers

United States Department of Agriculture Wildlife Services: Staff Publications

The reservoir for zoonotic o’nyong-nyong virus (ONNV) has remained unknown since this virus was first recognized in Uganda in 1959. Building on existing evidence for mosquito bloodfeeding on various frugivorous bat species in Uganda, and seroprevalence for arboviruses among bats in Uganda, we sought to assess if serum samples collected from bats in Uganda demonstrated evidence of exposure to ONNV or the closely related zoonotic chikungunya virus (CHIKV). In total, 652 serum samples collected from six bat species were tested by plaque reduction neutralization test (PRNT) for neutralizing antibodies against ONNV and CHIKV. Forty out of 303 (13.2%) Egyptian rousettes …

Caribbean Reef-Building Coral-Symbiodiniaceae Network: Identifying Symbioses Critical For System Stability In A Changing Climate, Shaman Patel

All HCAS Student Capstones, Theses, and Dissertations

Increasing global ocean temperatures and frequency of marine heatwaves pose dire consequences for coral reefs. High temperatures often lead to disruptions in coral symbiosis resulting in coral bleaching, increasing the mortality of corals. However, corals can potentially avoid bleaching peril by associating with thermally tolerant symbionts. Here we provide a tool for understanding symbiosis network stability of Caribbean reef-building corals. We created a network of Caribbean hermatypic corals and their associated Symbiodiniaceae phylotypes. A bleaching model was applied to this network to test for resilience and robustness (R50) to thermal stress. It was also layered with trait data for coral …

On The Firefly (Coleoptera: Lampyridae) Species Of Carl Linnaeus, Oliver Keller

Insecta Mundi

The firefly species described by Carl Linnaeus in 1758 and 1767 (Coleoptera: Lampyridae) were checked to determine the actual dates of publication. Nine out of twelve species were originally described in 1758 and not in 1767 as published in the majority of firefly literature. Lampyris hespera Linnaeus, 1767 as a junior synonym of Aspisoma lampyris (Linnaeus, 1758) is established.

Se revisaron las especies de luciérnagas descritas por Carl Linnaeus in 1758 y 1767 (Coleoptera: Lampyridae) para la determinación de fechas de publicación. Nueve de las doce especies fueron originalmente descritas en 1758 y no en 1767 como aparece publicado en …

New Distributional Records For Mexican Cleridae (Coleoptera) With The Description Of Three New Species, Jacques Rifkind

Insecta Mundi

New state records for 32 species of Mexican Cleridae (Coleoptera) are presented. In addition, 10 species of Cleridae are reported for Mexico for the first time (new country records). Cymatodera bezarki new species and Enoclerus sepultura new species are described from Chiapas, Mexico. Enoclerus primulus new species is described from Chiapas, Mexico and El Salvador.

Approximately 550 species of Cleridae are known from Mexico. These are divided among approximately 63 gen­era, of which the most speciose are Cymatodera Gray (ca. 110 species), Enoclerus Gahan (ca. 105 species) and Phyllobaenus Dejean (ca. 40 species). Faunistic studies are limited to Vaurie’s (1952) …

Crustacean Assemblage Structure Over The Charlie-Gibbs Fracture Zone Of The Mid-Atlantic Ridge Collected During The 2009 Henry B. Bigelow Expedition, Kathryn Medina

All HCAS Student Capstones, Theses, and Dissertations

The Charlie Gibbs Fracture Zone (CGFZ) consists of two nearly parallel fracture transform faults that intersect the Mid-Atlantic Ridge (MAR) axis. This area has high primary productivity and biomass levels due to the topography and water. A predominant hydrographic feature of the MAR is the Sub-Polar Front (SPF) which runs along the southern edge of the CGFZ and is known as a biogeographical boundary for multiple species. As part of The Census of Marine Life project Patterns and Processes of the Ecosystem of the northern Mid-Atlantic (MAR-ECO), this study analyzed the abundance and distribution patterns of the CGFZ crustacean community …

Abundance And Territory Location Data Of Forest Songbirds To Determine Effects Of Pipeline Collocation As A Mitigation Strategy, Lillie Langlois

All Data Sets

These data were collected for the purpose of determining potential ecological costs associated with a mitigation strategy used in shale gas development in the Appalachian basin. Collocation is the practice of siting new shale gas pipelines adjacent to existing surface disturbance such as forest roads to reduce habitat fragmentation and loss of core forest. These data result from spot mapping for species of songbird at paired forest road and shale gas corridors (expanded access roads collocated with pipelines) between May and July 2013 in north-central Pennsylvania, USA. The data file contains nine sheets that report data from different pieces of …

Aquaculture In Africa: Aquatic Animal Welfare, Impact On The Environment And The Sustainability Of The Sector, Mwenda M. Mbaka, Janice H. Cox, Stephen Ronan

Aquaculture

The African aquaculture sector recorded the fastest growth in the world between 2006-2018, averaging 10% or more, and is expected to partially fill the growing fish supply-demand gap up to 2063. In 2018, there were about 1.2 million aquafarmers across the continent, an increase from 920 thousand in 2014. According to the African Development Bank, expansion of aquaculture in Africa is hampered by "the overwhelming predominance of tilapia farming, which relies heavily on the production of fingerlings from a limited number of genetically improved strains that are resistant to the many diseases affecting this species, and on the production of …

Modeling Of Population Dynamics In Spatially Continuous And Heterogeneous Environments Using Partial Differential Equations, Ryan T. St. Clair

Masters Theses & Specialist Projects

This thesis provides an expansion of existing reaction diffusion population ecology models into patchy landscapes with greater spatial heterogeneity. The Sturm-Loiville eigenvalue problem for a heterogeneous 3 patch landscape is solved implicitly and the population growth rate and migration dynamics on such a landscape are thoroughly discussed. In addition a system of interface equations is found whose greatest solution is the dominant eigenvalue of an N-patch landscape. The results of this model agree well with previously published results and show the mathematical equivalence of two published approaches for incorporating organism behavior at habitat interfaces. Increased modeling capabilities in heterogeneous environments …

Geographic Distribution: Anolis Sagrei (Brown Anole). Usa: Arizona., Addie Leimroth, Louis A. Somma, Dyrana N. Russell, Logan P. Cutts, Mason Ryan, Randall D. Babb, Karen E. Hajek, Andrew T. Holycross

Papers in Herpetology

We discovered the first distributional records for the exotic, Caribbean lizard, Anolis sagrei (Brown Anole), in Arizona.

Occurrence Of Bat Species At Water Sources In Two Urban Parks In Nashville, Tennessee, Maya Kiev, Austin Farris, Evan Mason

Science University Research Symposium (SURS)

Animal behavioral patterns can shift due to anthropogenic factors related to pollution, human impact on flora/fauna, and changes in local water sources. While sound pollution can impact the occurrence of bats in urban areas, other factors could also influence bat behavior. This study examines bat occurrence near a water source at two urban parks in Nashville, Tennessee: one is in a highly trafficked area while the other is secluded and bordered by a suburban neighborhood. Both parks have small ponds, numerous trees, and open green spaces. Echo Meter Touch 2 devices were used to capture bat echolocation data at each …

Environmental Influences On The Growth Of Inland Cisco Populations In Three Minnesota Sentinel Lakes, Edward Carlson

Biology Graduate Theses

Cisco Coregonus artedi are a pelagic cold-water fish that are widely distributed throughout many inland lakes across the northern Midwest and play an important role as forage for large piscivores. Inland Cisco populations have been observed to vary in their overall size and recruitment potential based on the system in which they are found. Cisco are sensitive to oxythermal stress and with climate change, land use, and invasive species effects becoming more prevalent in Minnesota, aspects of lake ecosystems are changing, ultimately making Cisco more susceptible to these stressors. To investigate how different factors were affecting the population dynamics of …

Schramm Park Fall Field Days, Janis Paseka

Nebraska Bird Review

The 2022 NOU Fall Field Days were held at Schramm Park State Recreation Area, south of Gretna in Sarpy County, on September 21-23, with approximately 60 in attendance. The meeting had been scheduled and cancelled twice in the two previous years due to coronavirus concerns. The total species count was 119, including a Sandhill Crane, Prairie Falcon (early for away from breeding area), Winter Wren, and early Snow Bunting. A Limpkin, which had been found in late June at Wehrspann Wetlands mitigation pond in Sarpy County and was still seen through late November in the Wehrspann Lake area, was not …

The Nebraska Bird Review, Index To Volume 90

Nebraska Bird Review

From: Abbott, Sydney 56

To: Zonotrichia leucophrys oriantha 66, 146

The Nebraska Bird Review Volume 90 December 2022 Number 4

Nebraska Bird Review

Fall Field Report, August - November 2022 by W. Ross Silcock ...126

Remembering Clem Klaphake by Don Paseka ...151

Schramm Park Fall Field Days, Sept. 21-23, 2022 ... 154

Index to Volume 90 ...159

Subscription and Organization Information …175

Remembering Clem Klaphake, Don Paseka

Nebraska Bird Review

Clement (Clem) Klaphake passed away on December 30, 2022, from complications of Parkinson’s disease, which he struggled with for several years. He was born in Melrose, Minnesota, in 1943 and grew up working on his parents’ dairy farm, which included the usual menagerie of other farm animals typical of that time. Perhaps it was the routine of milking twice a day, seven days a week, or the impressive scar on his leg from a boar tusk, but Clem was destined to leave the farm and become a life-long educator. ... After getting his degree in 1971, Clem was hired to …

Avian Species Distribution Models: Using Location Data To Inform Management Decisions, Marilyn E. Wright

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Both state and federal wildlife agencies strive to conserve and protect wildlife and their habitats as an important public resource. Applied management decisions often rely on being able to obtain data that can efficiently and effectively enhance the understanding of these systems for informing management actions. Wildlife managers often focus efforts on a small subset of species from an ecosystem, typically called focal species, who can serve as surrogates for understanding the health and function of the system. Models that consider how these focal species interact with the ecosystem are often used to better understand important aspects of their life …

Extreme, Positive Geomorphic Change In A Historically Degraded Desert River: Implications For Imperiled Fishes, Tansy T. Remiszewski

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Rivers comprise some of the most unique and biodiverse ecosystems on the planet with their waters supporting both human societies as well as the organisms that make these rivers their home. Large rivers like the Colorado are often highly regulated and diverted in order to support human residence in arid regions like the desert Southwest, and these water diversions often have dramatic, negative impacts on the natural flow regime of the river. These impacts leave large reaches of the river dry, reduce the river’s capacity to transport sediment, cause channel and habitat homogenization, and significantly reduce the amount of suitable …

Seed Ecology And Regeneration Processes To Inform Seed-Based Wetland Restoration, Emily E. Tarsa

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Wetlands provide immense value to wildlife and humans but have been degrading rapidly around the world. One major challenge is the loss of native plant species in wetlands, which limits the ability of wetlands to function as they should. Restoring wetlands requires a combination of removing the cause of degradation (such as invasive plant species) and, in many cases, actively returning native plants to the site especially via seeding. Further, early plant life stages are the most vulnerable for plants and is often the time in which sown species die and fail to establish. Thus, understanding how and why seeds …

Dust Deposition Changes Production, Chlorophyll-A And Community Composition In Mountain Lakes, Jiahao Wen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Increasing quantities of dust emitted from semi-arid soils, agricultural soils, and urban regions are blown to remote mountain lakes in the American West. Remote mountain lakes lacking local nutrient inputs and presenting simple food webs that are easily affected by climate changes. Dust can carry nutrients (e.g., nitrogen and phosphorus) to mountain lakes and potentially enhance algae growth and change algal communities. However, experimental tests of this hypothesis are lacking. Using in situ experiments, we investigated the effects of dust enrichment on the production, biomass, and primary algal species in three mountain lakes in the American West. We found that …

Nest‐Site Selection, Success, And Response To Predators By Cinnamon Teal And Other Ground‐Nesting Ducks In The Wetlands Of Great Salt Lake, Utah, Mark E. Bell

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The wetlands of Great Salt Lake once supported hundreds of thousands of nesting ducks each year. In recent years, the number of nesting ducks in the same area was a fraction of those historic numbers. While many species of ducks do not rely on these wetlands for primary nesting habitat, cinnamon teal (Spatula cyanoptera) do. Great Salt Lake and its associated wetlands are in the heart of the cinnamon teal breeding range, and once supported half of the continental population.

These wetlands are unique from other wetlands where waterfowl nest because they are artificially created using dams to hold …

The Rise Of Terrorism In Africa And What It Means For U.S. Policymakers, Bridget Mary Hughes

Master's Theses

This thesis utilizes three case studies to measure the rise of terrorism in Africa. This qualitative data leads the reader to one ultimate question: what does the rise in terrorism in Africa mean for the United States (U.S.) and U.S. policymakers, National Security academia, students in National Security, if anything at all? The answer is: if civilian and military compounds are being targeted by these violent extremists, as these three case studies demonstrate, it is my recommendation that U.S. policymakers cease sending troops to the African theater and, instead, allocate funding to the citizens and nonprofits of the countries whom …

Distribution And Export Of Particulate Organic Carbon In East Antarctic Coastal Polynyas, Lavenia Ratnarajah, Viena Puigcorbé, Sébastien Moreau, Montserrat Roca-Martí, Julie Janssens, Matthew Corkill, Luis Duprat, Cristina Genovese, Jan Lieser, Pere Masqué, Delphine Lannuzel

Research outputs 2022 to 2026

Polynyas represent regions of enhanced primary production because of the low, or absent, sea-ice cover coupled with the proximity of nutrient sources. However, studies throughout the Southern Ocean suggest elevated primary production does not necessarily result in increased carbon export. Three coastal polynyas in East Antarctica and an off-shelf region were visited during the austral summer from December 2016 to January 2017 to examine the vertical distribution and concentration of particulate organic carbon (POC). Carbon export was also examined using thorium-234 (²³⁴Th) as a proxy at two of the polynyas. Our results show that concentrations and integrated POC …

Venomic Characterization Of A Medically Relevant Rear-Fanged Snake, Conophis Lineatus (Dipsadidae: Xenodontinae), From Middle America, Tristan Schramer

All Theses

Most traditional research on snake venoms has focused on front-fanged snake families (Viperidae, Elapidae, and Atractaspididae). However, venom is now generally accepted as being a much more broadly possessed trait within snakes, including species traditionally considered harmless. Unfortunately, due to historical inertia and methodological challenges, the toxin repertoires of non-front-fanged snake families (e.g., Colubridae, Dipsadidae, and Natricidae) have been heavily neglected despite the knowledge of numerous species capable of inflicting medically relevant envenomations. Integrating proteomic data for validation, we perform a de novo assembly and analysis of the Duvernoy’s venom gland transcriptome of the Central American Road Guarder (Dipsadidae: Xenodontinae: …

Round Goby (Neogobius Melanostomus) Seasonal Diet, Drift Impacts, And Influence On Stream Connectivity In Great Lakes Tributary Streams, Kyle R. Glenn Mr

Biology Theses

Seasonality, energy recruitment, and food web position dictate the degree of impact fish impose on their surrounding environment. In the Great Lakes, the round goby (Neogobius melanostomus) is known to out-migrate from nearshore habitat to offshore depths in the winter months. However, in Great Lake tributaries, round goby populations were found up to 25 km upstream during winter months, and distance upstream was a predictor of out-migration propensity; populations farthest upstream did not out-migrate. Seasonal resources shaped the diet and condition of these fish thus creating inland populations with different average lengths, diets, and body condition compared to …