Digital Commons Network^™

Lter Network Data Availability Correspondence, Emery Boose

Long Term Ecological Research Network

An email from Emery Boose regarding the tracking downloads from PASTA that was discussed in the EB meeting.

A Multispecies Avian Abundance Analysis In Riparian And Oak Woodland Habitats On The California Central Coast, Jacy Hyde

Biological Sciences

I investigated the abundance and diversity of riparian and oak woodland birds in a section of the Los Padres National Forest in Coastal Central California. Point counts were conducted in Oak Woodland and Riparian habitats during the summer of 2012. Point counts were replicated in time (2x) and space (25 replicates). The data were analyzed using Program Distance to correct for differing detection probabilities between species and habitat types. The two habitat types showed no significant difference in species richness. For most species, there was no difference in density between riparian and oak woodland habitats. However, the two species with …

A Comparison Of Relative Ear Length Between Two Neighboring Populations Of Peromyscus Maniculatus, Joshua S. Willems

Biological Sciences

This study attempts to determine if a significant difference in relative ear length exists between two neighboring populations of Peromyscus maniculatus on the central coast of California. Data was collected from individuals trapped at two plots in the Guadalupe-Nipomo Dunes National Wildlife Refuge and two plots near Black Lake, under the supervision of Francis X. Villablanca, Ph. D. of California Polytechnic State University, San Luis Obispo. A total of 98 individuals were captured over the course of three nights of trapping. A regression analysis was performed comparing the ear lengths of each population relative to body size. The analysis of …

American Burying Beetle (Nicrophorus Americanus): Species Conservation Assessment, Melissa J. Panella

Nebraska Game and Parks Commission: Publications

The primary goal in development of at-risk species conservation assessments is to compile biological and ecological information that may assist conservation practitioners in making decisions regarding the conservation of species of interest. The Nebraska Natural Legacy Project recognizes the American Burying Beetle (Nicrophorus americanus) as a Tier I at-risk species of high conservation priority. Indeed, the American Burying Beetle (ABB) is a species of conservation need throughout its range. Here, I provide some general management recommendations regarding ABB; however, conservation practitioners will need to use professional judgment for specific management decisions based on objectives, location, and site-specific conditions. This resource …

A Study Of Sharing And Reciprocity In Grey Parrots (Psittacus Erithacus), Franck Péron, Maria John, Stephanie Sapowicz, Dalila Bovet, Irene M. Pepperberg

Sentience Collection

Demonstrations of nonhuman ability to share resources and reciprocate such sharing seem contingent upon the experimental paradigm used (note Horner et al. in PNAS 108:13847–13851, 2011). Here, such behaviour in Grey parrots (Psittacus erithacus) was tested in two experiments, both designed to avoid possible issues involving apparatus complexity, visible reward options, and physical competition and/or limited communication between subjects. In both studies, two birds, working in dyads, took turns in choosing one of four different coloured cups with differing outcomes: empty (null, nonrewarding), selfish (keeping reward for oneself), share (sharing a divisible reward), or giving (donating reward to other). In …

Loggerhead Shrike (Lanius Ludovicianus): Species Conservation Assessment, Melissa J. Panella

Nebraska Game and Parks Commission: Publications

The primary goal in the development of at-risk species conservation assessments is to compile biological and ecological information that may assist conservation practitioners in making decisions regarding the conservation of species of interest. The Nebraska Natural Legacy Project recognizes the Loggerhead Shrike (Lanius ludovicianus) as a Tier I at-risk species. Here, I provide some general management recommendations regarding Loggerhead Shrikes. However, conservation practitioners will need to use professional judgment for specific management decisions based on objectives, location, and site-specific conditions. This resource provides available knowledge of Loggerhead Shrikes that may aid in the decision-making process or in identifying research needs …

Bulk Partitioning The Growing Season Net Ecosystem Exchange Of Co2 In Siberian Tundra Reveals The Seasonality Of Its Carbon Sequestration Strength, Benjamin R. K. Runkle, T. Sachs, C. Wille, E.-M. Pfeiffer, L. Kutzbach

Biological and Agricultural Engineering Faculty Publications and Presentations

This paper evaluates the relative contribution of light and temperature on net ecosystem CO2 uptake during the 2006 growing season in a polygonal tundra ecosystem in the Lena River Delta in Northern Siberia (72°22´ N, 126°30´ E). The occurrence and frequency of warm periods may be an important determinant of the magnitude of the ecosystem's carbon sink function, as they drive temperature-induced changes in respiration. Hot spells during the early portion of the growing season, when the photosynthetic apparatus of vascular plants is not fully developed, are shown to be more influential in creating positive mid-day surface-to-atmosphere net ecosystem CO2 …

Birds Of The Central Platte River Valley And Adjacent Counties, Mary Bomberger Brown, Paul A. Johnsgard

Zea E-Books Collection

The central Platte River Valley region of Nebraska is described ecologically, and defined as encompassing 11 counties and nearly 10,000 square miles, and extending about 120 miles from the western edge of Lincoln County to the eastern edge of Merrick County. At its center is the Platte River, the historic spring staging area for Sandhill and Whooping cranes, five species of geese, and millions of waterfowl and water-dependent birds, in addition to providing the breeding habitats for more than 100 other bird species. Collectively, at least 373 bird species have been reported from the Central Platte Valley, making it the …

Effects Of Plant Phenology And Vertical Height On Accuracy Of Radio-Telemetry Locations, Troy Grovenburg, Christopher N. Jacques, Robert W. Klaver, Christopher S. Deperno, Chad P. Lehman, Todd J. Brinkman, Kevin A. Robling, Susan P. Rupp, Jonathan A. Jenks

Natural Resource Management Faculty Publications

The use of very high frequency (VHF) radio-telemetry remains wide-spread in studies of wildlife ecology andmanagement. However, few studies have evaluated the influence of vegetative obstruction on accuracy in differing habitats with varying transmitter types and heights. Using adult and fawn collars at varying heights above the ground (0, 33, 66 and 100 cm) to simulate activities (bedded, feeding and standing) and ages (neonate, juvenile and adult) of deer Odocoileus spp., we collected 5,767 bearings and estimated 1,424 locations (28-30 for each of 48 subsamples) in three habitat types (pasture, grassland and forest), during two stages of vegetative growth (spring …

Parasitoid Infestation Changes Female Mating Preferences, Oliver M. Beckers, William E. Wagner

School of Biological Sciences: Faculty Publications

Females often adjust their mating preference to environmental and social conditions. This plasticity of preference can be adaptive for females and can have important consequences for the evolution of male traits. While predation and parasitism are widespread, their effects on female preferences have rarely been investigated. Females of the cricket Gryllus lineaticeps are parasitized by the parasitoid fly Ormia ochracea. Infestation with fly larvae substantially reduces female life span and thus reproductive opportunities of the cricket. Both female G. lineaticeps and flies orient to male song and both prefer male songs with faster chirp rates to songs with slower chirp …

Uncoupling Between Dinitrogen Fixation And Primary Productivity In The Eastern Mediterranean Sea, Eyal Rahav, Barak Herut, Noga Stambler, Edo Bar-Zeev, Margaret R. Mulholland

OES Faculty Publications

In the nitrogen (N)-impoverished photic zones of many oceanic regions, prokaryotic organisms fixing atmospheric dinitrogen (N₂; diazotrophs) supply an essential source of new nitrogen and fuel primary production. We measured dinitrogen fixation and primary productivity (PP) during the thermally stratified summer period in different water regimes of the oligotrophic eastern Mediterranean Sea, including the Cyprus Eddy and the Rhodes Gyre. Low N₂ fixation rates were measured (0.8-3.2μmol N m-2 d-1) excluding 10-fold higher rates in the Rhodes Gyre and Cyprus Eddy (~20μmol N m^-2 d^-1). The corresponding PP increased from east to west (200-2500μmol …

Rapid Change In Shallow Water Fish Species Composition In An Historically Stable Antarctic Environment, Bradley A. Buckley

Biology Faculty Publications and Presentations

McMurdo Sound, Antarctica, is home to a unique marine biota with an ecology that has evolved in this frigid environment over millions of years. The region is one of the least disturbed, and possibly the last pristine, marine ecosystem on Earth. Here, the results of three seasons of fishing in the shallow nearshore waters of McMurdo Sound are reported. A shift in the composition of small fish species at one site, Inaccessible Island, has been observed in just five years. The shift in shallow water species composition occurred during a period that followed the maturation of a commercial fishery for …

Landscape Genetics Of Leaf-Toed Geckos In The Tropical Dry Forest Of Northern Mexico, Christopher Blair, Victor H. Jimenez-Arcos, Fausto R. Mendez De La Cruz, Robert W. Murphy

Publications and Research

Habitat fragmentation due to both natural and anthropogenic forces continues to threaten the evolution and maintenance of biological diversity. This is of particular concern in tropical regions that are experiencing elevated rates of habitat loss. Although less well-studied than tropical rain forests, tropical dry forests (TDF) contain an enormous diversity of species and continue to be threatened by anthropogenic activities including grazing and agriculture. However, little is known about the processes that shape genetic connectivity in species inhabiting TDF ecosystems. We adopt a landscape genetic approach to understanding functional connectivity for leaf-toed geckos (Phyllodactylus tuberculosus) at multiple sites …

The Advertisement Call Of The Poorly Known Leptodactylus Tapiti (Anura, Leptodactylidae), Reuber Albuquerque Brandão, Guilherme Fajardo Roldão Álvares, Rafael O. De Sá

Biology Faculty Publications

The genus Leptodactylus consists of approximately 80 species distributed in four nominal groups (Frost 2011). The fuscus group harbors approximately 30 small species with terrestrial nests, deposited in male built burrows on soft soils. Leptodactylus tapiti Sazima & Bokermann 1978 was described from Veadeiros, currently Alto Paraíso municipality, Goiás State, Brazil. The species is restricted to the region of Chapada dos Veadeiros (Frost 2011), where it occurs in areas of water-saturated soils associated with open fields (Sazima & Bokermann 1978). Since its original description, nothing was published about the species, and its advertisement call remains unknown. Herein, we describe its …

Application Of Qualitative Behavioural Assessment To Horses During An Endurance Ride, Patricia A. Fleming, Cheree L. Paisley, Anne L. Barnes, Françoise Wemelsfelder

Sentience Collection

Endurance horses are considered subject to a unique set of training and competing pressures due to the long distances travelled. The health and welfare of these horses could be compromised if they have not been adequately trained or are pushed beyond their limits, and there are increasing concerns regarding the capacity of horses to cope with the exercise demands placed on them, with high elimination rates for lameness and metabolic reasons. Veterinary inspections during these rides are important for assessing physiological measures, but the inclusion of behavioural assessments is also warranted. We investigated the application of Qualitative Behavioural Assessment (QBA) …

Inter-Observer Reliability Of Qualitative Behavioural Assessments Of Sheep, Clare Phythian, Eleni Michalopoulou, Jennifer Duncan, Françoise Wemelsfelder

Sentience Collection

Qualitative Behaviour Assessment (QBA) is whole-animal methodology that assesses the expressive qualities of animal demeanour using descriptors such as ‘relaxed’, ‘anxious’ or ‘content’. This study aimed to examine the inter-observer reliability of 12 fixed-list QBA descriptors for sheep that had been generated in a previous Free-Choice Profiling study by experienced animal welfare inspectors, based on the same video footage used in the current study. The 12 QBA terms were scored by two different assessor groups consisting of two veterinary science students and four veterinary surgeons (Group 1), and seven farm assurance inspectors (Group 2). The two assessor groups met and …

Attitudes Toward Evolution At New England Colleges And Universities, United States, Guillermo Paz-Y-Miño-C, Avelina Espinosa

New England Science Public: Series Evolution

Paz-y-Miño-C G & Espinosa A. 2013. Attitudes toward Evolution at New England Colleges and Universities, United States. New England Science Public: Series Evolution 1(1): 1-32 (ISSN: 2326-0971). We compile the most significant results of our conceptual and quantitative studies on the patterns of acceptance of evolution at New England colleges and universities, conducted between 2009 and 2012. We examine the views of New England Faculty and Educators of Prospective Teachers (higher-education faculty themselves, specialized in training future teachers) from 35 colleges and universities, as well as a representative sample of College Students from a Public, Private and two Religious …

Assessing Regional And Interspecific Variation In Threshold Responses Of Forest Breeding Birds Through Broad Scale Analyses, Yntze Van Der Hoek, Rosalind Renfrew, Lisa L. Manne

Publications and Research

Background: Identifying persistence and extinction thresholds in species-habitat relationships is a major focal point of ecological research and conservation. However, one major concern regarding the incorporation of threshold analyses in conservation is the lack of knowledge on the generality and transferability of results across species and regions. We present a multi-region, multi-species approach of modeling threshold responses, which we use to investigate whether threshold effects are similar across species and regions.

Methodology/Principal Findings: We modeled local persistence and extinction dynamics of 25 forest-associated breeding birds based on detection/non-detection data, which were derived from repeated breeding bird atlases for the state …

(Review) Deep History: The Architecture Of Past And Present, Frederick S. Paxton

History Faculty Publications

The article reviews the book "Deep History: The Architecture of Past and Present," edited by Andrew Shryock and Daniel Lord Smail.

Proximal Sensing As A Means Of Characterizing Phragmites Australis, Travis Yeik

Department of Geography: Dissertations, Theses, and Student Research

Phragmites australis is an invasive wetland weed found throughout much of the United States. Documenting and mapping the growth and spread of this emergent macrophyte can be an important step in developing and implementing successful management strategies. Characterizing the phenology of a vegetation species with a sensor capable of hyperspectral resolution, positioned at close proximity to the canopy of interest, is often a first step necessary for understanding the basic species-specific reflectance patterns, and for quantifying the manner in which light interacts with the plants comprising particular communities. Spectral data over a P. australis canopy were collected during 22 …

Climate Change At The Ecosystem Scale: A 50-Year Record In New Hampshire, Steven P. Hamburg, Matthew A. Vadeboncoeur, Andrew D. Richardson, Amey S. Bailey

All Materials

Observing the full range of climate change impacts at the local scale is difficult. Predicted rates of change are often small relative to interannual variability, and few locations have sufficiently comprehensive long-term records of environmental variables to enable researchers to observe the fine-scale patterns that may be important to understanding the influence of climate change on biological systems at the taxon, community, and ecosystem levels. We examined a 50-year meteorological and hydrological record from the Hubbard Brook Experimental Forest (HBEF) in New Hampshire, an intensively monitored Long-Term Ecological Research site. Of the examined climate metrics, trends in temperature were the …

Recently Described Vulture One Of Several New Avian Species From The Ashfall Fossil Beds, Rick E. Otto

University of Nebraska State Museum: Programs Information

Several species of fossil bird are known from the Ashfall Fossil Beds. As of publication date, all represent previously undescribed species. In 2012, ornithologists Zhang, Feduccia and James described a vulture from isolated remains recovered from the Ashfall site in 1979. Similar in morphology to the Palm-nut Vulture (Gypohierax) of Africa, the relationship to the Ashfall vulture is unclear, and may represent an example of convergent evolution. The fossil vulture was designated Anchigyps voorhiesiin honor of paleontologist Michael Voorhies.

Continuous, Pulsed And Disrupted Nutrient Subsidy Effects On Ecosystem Productivity, Stability, And Energy Flow, Michael J. Weber, Michael L. Brown

Natural Resource Management Faculty Publications

Resource pulses and subsidies can supply ecosystems with an important source of nutrients that supports additional productivity at multiple trophic levels. Common carp Cyprinus carpio provide ecosystems with a continuous nutrient subsidy through bioturbation and excretion but may also initiate a nutrient pulse through carcass decomposition. We examined how continuous (common carp foraging and excretion), pulsed (carcass decomposition) and disrupted (carp introduced and then removed) nutrient subsidies differed in their ability to alter nutrient availability, ecosystem productivity and stability and energy flow. Nitrogen and phosphorus availability and primary production were highest in pulsed, intermediate in continuous and lowest for disrupted …

Three Poems: The Lorenz Transformations, Rotating The Strange Attractor To Find The Principal Components, The Sieve Of Eratosthenes, Robin Chapman

Journal of Humanistic Mathematics

No abstract provided.

Pattern Of Social Interactions After Group Integration: A Possibility To Keep Stallions In Group, Sabrina Briefer Freymond, Elodie F. Briefer, Rudolf Von Niederhäusern, Iris Bachmann

Ethology Collection

Horses are often kept in individual stables, rather than in outdoor groups, despite such housing system fulfilling many of their welfare needs, such as the access to social partners. Keeping domestic stallions in outdoor groups would mimic bachelor bands that are found in the wild. Unfortunately, the high level of aggression that unfamiliar stallions display when they first encounter each other discourages owners from keeping them in groups. However, this level of aggression is likely to be particularly important only during group integration, when the dominance hierarchy is being established, whereas relatively low aggression rates have been observed among stable …

Tree Climbing And Human Evolution, Vivek V. Venkataraman, Thomas S. Kraft, Nathaniel J. Dominy

Dartmouth Scholarship

Paleoanthropologists have long argued—often contentiously—about the climbing abilities of early hominins and whether a foot adapted to terrestrial bipedalism constrained regular access to trees. However, some modern humans climb tall trees routinely in pursuit of honey, fruit, and game, often without the aid of tools or support systems. Mortality and morbidity associated with facultative arboreality is expected to favor behaviors and anatomies that facilitate safe and efficient climbing. Here we show that Twa hunter–gatherers use extraordinary ankle dorsiflexion (>45°) during climbing, similar to the degree observed in wild chimpanzees. Although we did not detect a skeletal signature of dorsiflexion …

Allometric Scaling And Resource Limitations Model Of Tree Heights: Part 1. Model Optimization And Testing Over Continental Usa, Yuli Shi, Sungho Choi, Xiliang Ni, Sangram Ganguly, Gong Zhang, Hieu V. Duong, Michael A. Lefsky, Marc Simard, Sassan S. Saatchi, Shihyan Lee, Wenge Ni-Meister, Shilong Piao, Chunxiang Cao, Ramakrishna R. Nemani, Ranga B. Myneni

Publications and Research

A methodology to generate spatially continuous fields of tree heights with an optimized Allometric Scaling and Resource Limitations (ASRL) model is reported in this first of a multi-part series of articles. Model optimization is performed with the Geoscience Laser Altimeter System (GLAS) waveform data. This methodology is demonstrated by mapping tree heights over forested lands in the continental USA (CONUS) at 1 km spatial resolution. The study area is divided into 841 eco-climatic zones based on three forest types, annual total precipitation classes (30 mm intervals) and annual average temperature classes (2 °C intervals). Three model parameters (area of single …

Walking Box Ranch Planning And Design Quarterly Progress Report: Period Ending January 10, 2013, Margaret N. Rees

Walking Box Ranch

• BLM notified UNLV on Nov 7, 2012 that they had cancelled the WBR solicitation for a general contractor and that they were reconsidering the scope of the project. BLM and UNLV met on Nov. 22, 2012 and BLM updated UNLV on their decision to terminate the task agreement for the field and research station, and to modify plans for interpretation at the future WBR Visitor Center. BLM and UNLV will meet Feb. 7, 2013 to discuss the path forward regarding interpretation and the Visitor’s Center.
• UNLV is continuing to work with direction from Carolyn Shelton, BLM interpreter, to collect interpretive …

Long-Term Data For Endemic Frog Genera Reveal Potential Conservation Crisis In The Bale Mountains, Ethiopia, David J. Gower, Roman K. Aberra, Silvia Schwaller, Malcolm J. Largen, Ben Collen, Stephen Spawls, Michele Menegon, Breda M. Zimkus, Rafael O. De Sá, Et Al.

Biology Faculty Publications

Populations of many frogs have declined alarmingly in recent years, placing nearly one third of the > 6,000 species under threat of extinction. Declines have been attributed largely to habitat loss, environmental degradation and/or infectious diseases such as chytridiomycosis. Many frogs undergo dramatic natural population fluctuations such that long-term data are required to determine population trends without undue influence of stochastic factors. We present long-term quantitative data (individuals encountered per person hour of searching) for four monotypic frog genera endemic to an Afromontane region of exceptional importance but growing conservation concern: one endemic to the Ethiopian highlands (Spinophrynoides osgoodi) and three …

The Problem Of Too Many Statistical Tests: Subgroup Analyses In A Study Comparing The Effectiveness Of Online And Live Lectures, David M. Lane

Numeracy

The more statistical analyses performed in the analysis of research data, the more likely it is that one or more of the conclusions will be in error. Multiple statistical analyses can occur when the sample contains several subgroups and the researchers perform separate analyses for each subgroup. For example, separate analyses may be done for different ethnic groups, different levels of education, and/or for both genders. Media reports of research frequently omit information on the number of subgroup analyses performed thus leaving the reader with insufficient information to assess the validity of the conclusions. This article discusses the problems with …