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Addressing The Productivity-Susceptibility Analysis In Data-Limited Fisheries For Understudied Fish In The Marine Aquarium Trade, Alice Wynn, Jemelyn Baldisimo, Gabrielle Baillargeon, Michael Tlusty, Andrew Rhyne

Biological Sciences Faculty Publications

The marine aquarium trade (MAT) harvests millions of coral reef fishes from the wild yearly. While the MAT supports fishers, hobbyists and marine education, harvested fishes are crucial in maintaining coral reef health and balanced marine cycles within their native habitats. Understanding the impact of the MAT on fish populations is critical for sustaining the trade in the long-term. Productivity-susceptibility analyses (PSAs) offer semiquantitative methods of analyzing the productive capacity of each fish stock, as well as its susceptibility to overfishing. The present study revises and expands upon a PSA conducted by Baillargeon et al. (2020) that focused on 32 …

Divergent Floral And Vegetative Trait Responses To Abiotic Factors Drive Phenotypic Diversity In Platanthera Dilatata (Orchidaceae) Across Alaska, Marlin L. Bowles, Lisa E. Wallace

Biological Sciences Faculty Publications

Multiple traits make up an integrated phenotype, but traits may be shaped by differing drivers. It is often assumed that selection by biotic agents drives floral variation, but abiotic factors are also known to influence floral traits. Understanding trait covariations and their association with diverse environmental factors is a central question in evolution and ecology. Here, we studied covariation in floral and vegetative traits in relation to climate and topo-edaphic variation in the orchid Platanthera dilatata. In Platanthera, nectar spur length is associated with pollinator tongue length, but much variation exists in other traits too, likely to be …

High Temporal Resolution Gene Expression Analysis Of Acute Heat Stress Response In Acropora Cervicornis And Porites Astreoides, Katherine Parker, Nicolas Evensen, Iliana Baums, Daniel Barshis

Biological Sciences Faculty Publications

Widespread coral bleaching and mortality events are becoming increasingly frequent due to rising ocean temperatures, though certain coral species and populations have displayed higher tolerance to elevated emperatures than others. As such, it is of high research priority to identify thermally tolerant coral populations for research and conservation and assess the biological mechanisms allowing these populations to survive exposure to higher temperatures. This research utilized the Coral Bleaching Automated Stress System (CBASS), a portable experimental aquaria system with precise temperature manipulation, to assess the thermal thresholds and heat stress response of two coral species from Summerland Key, FL, USA. Seven …

Genome-Wide Snp Analyses Reveal High Gene Flow Of Endemic Smallscale Croaker (Boesemania Microlepsis) In The Lower Mekong Basin, Quyen Dang Ha Vu, Christopher E. Bird, Oanh Thi Truong, Sang Quang Tran, Ellen E. Biesack, Amanda S. Ackiss, Kent E. Carpenter, Binh Truy Dang

Biological Sciences Faculty Publications

The Smallscale Croaker, Boesemania microlepis, is a valuable fishery resource in the Mekong River basin that lacks clear biological data to understand its basic ecology and conservation management priorities. This species is common in the southernmost floodplain of the Mekong which extends from Tonlé Sap in Cambodia to the Mekong Delta in Vietnam. This floodplain is of particular biodiversity conservation concern because of the many upstream dams that restrict water flow in an ecology that relies heavily on a flood-pulse cycle. The literature regarding the biology B. microlepis in this region contains conflicting ideas that populations are both highly …

Endocrine Responses To Two Distinct Foraging Contexts In The Bonobo (Pan Paniscus), Lauren Mitchell

Master's Theses

In gregarious animals, a social structure characterized by female dominance is relatively rare. However, bonobos (Pan paniscus), one of the two species most closely related to humans, are characterized by partial female dominance, with females forming close social bonds. In contrast, chimpanzees (Pan troglodytes), a close relative of the bonobo, are characterized by strong male-male bonding and social dominance with female chimpanzees lacking close social bonds. There is a lack of consensus concerning the reasons for these behavioral differences in Pan, specifically, the physiological processes responsible for female dominance in bonobos. The role of hormones …

Group And State-Specific Estimation In Animal Movement Models Using A Bayesian Approach, Anita Bhandari Sharma

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This research study investigates statistical approaches for modeling the movement patterns of white-tailed deer in Louisiana using GPS tracking data. We start by classifying the latent behavioral states using a hidden Markov model (HMM) and then integrate those inferred states into a state-dependent step selection framework to evaluate the land cover preferences. Standard HMMs, however, assume the same movement patterns for all animals, overlooking the differences due to characteristics such as sex, age, breeding season, etc.

To address this limitation, we extend the modeling framework to incorporate the group-level structure defined by similar characteristics or conditions to assess whether such …

Efficacy Of Stress Acclimation Techniques In Coastal Wetland Plants (Spartina Alterniflora And S. Patens): Implications For Restoration And Nursery Production, Taylor M. Sloey, Kylie D. Gieser, Kaitlyn Pounders, Sofía E. Báez, Jennifer L. Whytlaw

Biological Sciences Faculty Publications

The implementation of coastal nature-based features, created wetlands, and wetland restoration has increased globally over recent years. Many of these projects have been successful in meeting their goals, however, when projects fail, it is often attributed to mortality of transplanted vegetation. Transplant mortality may be due to inappropriate timing, poor site selection, or abiotic stressors associated with transplant shock. Science-backed guidelines have been well established in many coastal regions regarding site specifications and species selection, but nursery practices for reducing transplant shock remain inconsistent. In this study, we tested a combination of four salinity acclimation treatments and two inundation acclimation …

Long-Term Abundance Estimates Of A Northeast Florida Estuarine Dolphin Community: Evaluating The Impacts Of The 2013–2015 Cetacean Morbillivirus Unusual Mortality Event, Allison L. Wilkins

UNF Graduate Theses and Dissertations

Tamanend's bottlenose dolphins (Tursiops erebennus) in the St. Johns River (SJR), Jacksonville, FL, are subjected to substantial anthropogenic stressors (e.g., vessel traffic, dredging, fisheries interactions) and were heavily impacted by the 2013-2015 Mid-Atlantic cetacean morbillivirus unusual mortality event (UME). High prevalence of skin lesions and frequent sightings of emaciated dolphins suggest declining health and viability of the SJR dolphin community. Sighting data from Jul. 2011 to Oct. 2019 provided the rare opportunity to investigate long-term changes in dolphin abundance surrounding the UME. This study produced the first dolphin abundance estimate within the Jacksonville Estuarine System stock since 1997, …

Monograph Available: Urban Coyotes As A Source Of Conflict With Humans: An Evaluation Of Common Management Practices

Human–Wildlife Interactions

This is an announcement about the published monograph titled "Urban Coyotes as a Source of Conflict with Humans: An Evaluation of Common Management Practices." This publication, part of the HWI Monograph Series, is online and open access.

Exploring Mating Patterns: The Interplay Of Genes, Environment, And Their Evolutionary Outcomes, Sanduni Talagala

Theses and Dissertations (Comprehensive)

There is great variation in the reproductive tactics exhibited both between and within different species, which is reflected in how individuals engage in mate assessment, mate choice and offspring production. It is therefore important to understand general mating patterns of populations, the factors that influence these mating patterns, and the consequences they carry, in order to get a more holistic understanding of mating systems. This doctoral research represents a multi-pronged investigation of the factors shaping mating patterns and their consequences, how environmental factors influence mating patterns, and how both genotypes and the environment interact to influence mate choice decisions and …

Timing Of Migration And Seasonal Movements Of Arctic Grayling (Thymallus Arcticus) In Relation To Water Temperature In The Kakisa River And Upper Mackenzie River, Nwt: Results From An Acoustic Telemetry Study., Levi Snook

Theses and Dissertations (Comprehensive)

Arctic grayling (Thymallus arcticus) are a cold-water salmonid that inhabit waterbodies throughout the circumpolar regions of the northern hemisphere. In the last decade, Ka'a'gee Tu First Nation members as well as local sport fishers, have observed lower catches of Arctic grayling during their annual spawning run in the Kakisa River, NWT. Many potential causes of this decline have been hypothesized including climate change and over harvesting. Outside of the general annual spawning activity in the headwaters of the Kakisa River, the ecology of the population, including post-spawn habitat use and migratory patterns, remained understudied. To address these knowledge gaps, acoustic …

Thermokarst Can Stimulate Tall Shrub Productivity And Plant-Soil Feedbacks In The Low-Arctic Tundra, Claire O'Brien

Theses and Dissertations (Comprehensive)

Warming temperatures are exacerbating permafrost thaw disturbances in the Arctic. Permafrost thaw disturbances are facilitating tall, deciduous shrub expansion. However, potential productivity differences between shrubs that colonize disturbed areas and those in undisturbed tundra remain understudied. More productive shrubs optimize for fast growth over leaf longevity, meaning they may produce more abundant and higher quality litter which could accelerate decomposition rates and lead to faster nutrient cycling. Faster nutrient cycling could create a positive feedback loop between shrubs and soil, maintaining greater ecosystem productivity. I measured in situ soil characteristics and physiological and structural shrub functional traits for green alder …

Macroinvertebrate Communities And Food Web Structure In Tundra Streams Are Shaped By Substrate Size And Beaver Impoundments, Mathew K. Mervyn

Theses and Dissertations (Comprehensive)

North American beavers (Castor Canadensis) are expanding their range into the Arctic tundra as climate change drives earlier ice and snowmelt, and increased shrub cover. As ecosystem engineers, beavers build dams that alter water chemistry by creating impoundments within streams, trapping sediment and organic matter, and modifying nutrient cycling. This thesis evaluates how beaver impoundments interact with natural geomorphic variation in tundra streams and how impoundments affect tundra freshwater ecosystems in the western Canadian Arctic.

In Chapter 2, I compared water chemistry and benthic macroinvertebrate (BMI) community composition across 16 stream reaches, including those with and without beaver dams, with …

Severe Aggression Among Zoo-Housed Coconut (Trichoglossus Haematodus) And Rainbow (Trichoglossus Moluccanus) Lorikeets: Wellbeing Considerations For Free-Flight Aviaries, Emily Simkins

UNF Graduate Theses and Dissertations

As conservation and education institutions, modern zoos balance the needs of animals with the interests of visitors through several strategies which can increase animal wellbeing and improve visitor experience. Environmental enrichment is frequently employed to increase the suitability of anthropogenic environments for zoo-housed animals, such as through walkthrough habitats and free-flight aviaries. While habitats such as these are important for visitor experience and can be enriching to animals, there are also wellbeing considerations for these spaces. Walkthrough habitats can be a potential source of fear and stress for animals, as shown by increased frequencies of vigilance, undesirable behavior, and aggression. …

Tree Crown Economics Of Broadleaf Deciduous Forests, Yiting Fan

Graduate Theses, Dissertations, and Problem Reports (ETD)

Tree crown architecture, a critical determinant of forest ecosystem processes such as photosynthesis, evapotranspiration, and spectral reflectance, is shaped by adaptive trade-offs in resource use and environmental responses. However, significant gaps remain in our understanding of how these traits vary across species, environmental gradients, and temporal scales. This dissertation addresses these gaps by employing remote sensing data across three interconnected studies. Together, these studies advance tree crown economic theory, highlighting how crown traits mediate trade-offs between light capture and water-use efficiency and how these traits influence forest responses to global change. Collectively, this dissertation offer insights for improving models that …

Genomic Differences And Parentage In West Virginia's Reintroduced Elk (Cervus Canadensis), Adam A.V. Cook

Graduate Theses, Dissertations, and Problem Reports (ETD)

Elk (Cervus canadensis) reintroductions have been common in the 20th and 21st centuries, yet 40% have failed to establish self-sustaining elk populations due to a lack of post-reintroduction demographic monitoring. Elk were reintroduced to West Virginia in 2016 following more than a century of absence after the species was extirpated in 1875. Elk were translocated to West Virginia from Land Between the Lakes National Recreation Area (LBL) in eastern Kentucky and from Arizona. The two groups of elk differ in their subspecies, physiology, reintroduction history, connectivity, and habitat. Reintroductions create genetic risks such as the founder effect and …

Microbial And Plant Biodiversity In Appalachian Agroecosystems And Their Implications For Soil Health, Kinsey Reed Close

Graduate Theses, Dissertations, and Problem Reports (ETD)

The sustainability of agricultural landscapes depends on understanding the complex interactions between plants, soil, and microbes. In Appalachia, a region shaped by complex terrain and long histories of human and ecological interaction, small family farms produce hay, livestock, and row crops. These agroecosystems, though often treated as “artificial” by many ecologists, have the potential to support both food production and biodiversity conservation if managed with an understanding of ecological complexity. This dissertation examines how plant and microbial diversity interact with soil and management to influence nutrient cycling, soil health, and long-term resilience in Appalachian agricultural systems. A literature review revealed …

Characterizing Nursery Habitat For Juvenile Invasive Carp (Hypophthalmichthys Spp.) On The Ohio River, Rebecca Hiller

Graduate Theses, Dissertations, and Problem Reports (ETD)

Since their introduction to US waters, Silver Carp (Hypophthalmichthys molitrix) and Bighead Carp (H. nobilis) have rapidly spread throughout the Mississippi River basin and its major tributaries, but their invasion has stalled within the Ohio River. Recent research has suggested this slowed spread could be due to a lack of suitable nursery habitat in the Ohio River, affecting recruitment of invasive carp. This study aims to characterize the habitats juvenile carp are utilizing by investigating three main lines of inquiry: that juvenile carp habitat use is limited by (1) the flow regime of the Ohio River …

The Effect Of Cerebellar Feedback On The Spatial Processing Of Conspecific Signals In The Electrosensory System, Dakota Ray Miller

Graduate Theses, Dissertations, and Problem Reports (ETD)

Animals have evolved sensory systems to help decipher important environmental signals that are vital for their survival. Feedback pathways are necessary to allow these signals to stand out in a noisy background, enabling the animal to focus on them more effectively. The electrosensory system of Apteronotus leptorhynchus allows the fish to sense the modulations caused by other conspecifics to allow for proper responses during social interactions. Electroreceptors detect these EODs, and afferent nerves project these signals to the ELL, where electrosensory information is projected to other parts of the brain. Cerebellar feedback to the ELL allows the suppression of lower …

The Role Of Floodplain Complexity In Wood Turtle Habitat Use, Laura S. Deming

Antioch University Dissertations & Theses

Wood turtles occupy cold, low-gradient riverine habitat throughout the northeastern United State and southeastern Canada. Stream alterations, such as dams, channel straightening, and floodplain development have diminished the natural hydrologic and sedimentation regimes that result in complex channel and floodplain geomorphology. Studies throughout the species’ range have quantified many aspects of their habitat, but none have quantified components of geomorphology of wood turtle sites. The goal of this study was to explore the role of stream channel and floodplain geomorphology in wood turtle habitat use, with specific objectives to (1) quantify components of stream channel and floodplain geomorphic complexity, (2) …

Dam It All: A Multi-Scalar Investigation Into The Ecological Role And Function Of Beaver Dams, Kenneth Larsen

Dissertations, Master's Theses and Master's Reports

The central theme of this dissertation is ecological scaling, which examines how small, localized features, such as beaver ponds, contribute to large-scale watershed processes and how different modeling approaches at various scales reveal distinct insights. Through a combination of probabilistic modeling and high-resolution empirical research, this work demonstrates that small ponded systems, particularly those created by beavers (Castor canadensis), serve as critical biogeochemical control points, whose contributions to sediment and nutrient dynamics have been historically underestimated.

In Chapter 1, I contextualize this research within the broader fields of freshwater ecology, watershed modeling, and ecological restoration. I introduce the …

Dr. Eric Angel Ramos - A Shooting Star That Inspired Marine Mammalogists And Beyond (1987 – 2024), Laura J. May-Collado, Jeremy J. Kiszka, Nataly Castelblanco-Martínez, Beth Brady, G. Rieucau, Daniel Gonzalez-Socoloske, Renata Sousa-Lima, Diana Reiss, Macelo Magnasco, Roderic Mast, Wayne Sentman, Joy S. Reidenberg

Faculty Publications

No abstract provided.

The Impacts Of Permafrost Thaw Slumps On Arctic Stream Ecology, Maria Dolan

Theses and Dissertations (Comprehensive)

Climate change is intensifying permafrost thaw across terrain of the circumpolar Arctic. Increased temperatures and rainfall at northern latitudes have resulted in the expansion of thermokarst features such as retrogressive thaw slumps, which make previously frozen debris available for transport into nearby river systems. In the Peel Plateau, Northwest Territories, the mobilization of these materials exposes rivers to a large quantity of sediment and solutes that may act as a chronic, press disturbance, potentially altering stream food webs. Here, I examine if: 1) thaw slumps have driven changes to the physical and biological properties of slump impacted streams since an …

Quantifying Ecological Processes Predicting Barren-Ground Caribou (Ɂetthën; Rangifer Tarandus Groenlandicus) Occurrence Across A Heterogenous Northern Indigenous Protected And Conserved Area., Eric Jolin

Theses and Dissertations (Comprehensive)

Northern ecosystems are experiencing a period of rapid and unprecedented change, with implications for species distributions, mammal community dynamics, and habitat associations. Understanding the ecological processes that shape species distributions is crucial for developing effective conservation strategies that can adapt to such change. This study examines drivers of barren-ground caribou occurrence, a species of cultural and ecological significance, across Thaıdene Nëné Indigenous Protected Area, an ecologically intact landscape of high habitat heterogeneity straddling the treeline of the Northwest Territories. I use spatial and temporal variation in caribou detections generated by camera traps to test the relative importance of apparent competition, …

Ocean Acidification Mitigation: Potential Expansion Of Sav Restoration Strategy In The Chesapeake Bay, Cree N. Taylor

Undergraduate Research Posters

Zostera marina is a species of marine macrophyte that has been largely prioritized in past submerged aquatic vegetation (SAV) restoration initiatives within the Chesapeake Bay because of its 1) previous abundance, 2) demonstrated carbon burial abilities, and 3) observed ability for meadows of Z. marina to ameliorate low pH conditions. Due to the temperature variability and poor water quality associated with anthropogenic disturbances in the Chesapeake Bay, Z. Marina beds have experienced several die-off events with limited capacity for regrowth. This systematic review explored the possible benefits of focusing future SAV recovery initiatives on ensuring a diverse variety of SAV …

Acer Rubrum: Descending Towards Forest Dominance, Elyssa L. Pearson, Christopher M. Gough

Undergraduate Research Posters

Acer rubrum, more commonly known as the red maple, is a hardwood, late successional species of tree commonly planted for its deciduous nature and vibrant coloring of its leaves in the beginning of autumn (Abrams, 1998). The species is very tolerant of varying light and soil moisture levels and often dominates sub and mid-canopy levels of hardwood forests (Missouri Botanical Gardens). It was hypothesized that as the I moved from an upland location to a lowland location near a wetland that the A. rubrum trees would be more productive and have a greater above ground biomass. This was not …

Aspen Stands Enrich Bird Communities Following A Wildfire In A Montane, Mixed Conifer Forest, Cody Q. Lane

Graduate Student Theses, Dissertations, & Professional Papers

Fire is a major ecological force in most terrestrial systems, but the responses of animal communities to fire vary markedly across ecosystems due to variability in fire regimes and vegetation communities. Quaking aspen (Populus tremuloides) is unique within coniferous forests of western North America for its ability to regenerate following wildfire via vegetative resprouting. As managers employ techniques to restore fire regimes and conserve declining aspen forests, it becomes important to understand how aspen alters postfire communities. Our objectives were to (1) assess how aspen interacted with fire severity and years since fire to influence avian species and …

In The Clear: Timber Harvest Informs Elk Summer Nutrition And Resource Selection In A Densely Forested Landscape, Trevor C. Weeks

Graduate Student Theses, Dissertations, & Professional Papers

As wildlife and habitats face unprecedented challenges in the form of landscape conversion, shifting disturbance regimes, and climate change, it becomes increasingly important for land and wildlife managers to find avenues for collaboration as they seek to maintain habitat to support robust wildlife populations. Timber harvest may provide one such avenue for collaboration. It has been shown to increase the quality and quantity of ungulate nutritional resources by reverting stands to early successional stages. Additionally, timber harvest may allow for a more precise application of such effects, as managers choose where and how to harvest timber. However, the exact effects …

Griffin's Slow Burn Revolution In Philosophy And Comparative Cognition, Kristin Andrews

Animal Sentience

Ristau presents Griffin as launching a scientific revolution supported by philosophical insights. This commentary focuses on two points: Griffin as a scientific revolutionary, although the cognitive ethology revolution is not yet complete; and on the immense influence Griffin had, and continues to have, on philosophy.

Economic Analysis And Profitability Of Honey Production And Marketing In Cross River State, Nigeria, Joseph A. Ugbe, Tee T.N., Ancha P.U

Journal of Bioresource Management

The significance of honey in the socio-economic livelihoods of rural and semi-urban populations is paramount, as it tackles issues such as unemployment, income, and ecosystem preservation. The decrease in the timber industry has caused numerous individuals who rely on forests for their income to be without jobs, making it difficult to find other ways to make a living. This study examines the economic analysis and profitability of honey production and marketing in Cross River State, Nigeria, over 5 years (2017-2021) for sustainable forest management. Six hundred and eighty-four (684) respondents were selected from three ecological zones in the state using …