Digital Commons Network^™

Modeling Mongoose Rabies In The Caribbean: A Model-Guided Fieldwork Approach To Identify Research Priorities, Caroline C. Sauvé, Erin E. Rees, Amy T. Gilbert, Are R. Berentsen, Agathe Allibert, Patrick A. Leighton

United States Department of Agriculture Wildlife Services: Staff Publications

We applied the model-guided fieldwork framework to the Caribbean mongoose rabies system by parametrizing a spatially-explicit, individual-based model, and by performing an uncertainty analysis designed to identify parameters for which additional empirical data are most needed. Our analysis revealed important variation in output variables characterizing rabies dynamics, namely rabies persistence, exposure level, spatiotemporal distribution, and prevalence. Among epidemiological parameters, rabies transmission rate was the most influential, followed by rabies mortality and location, and size of the initial infection. The most influential landscape parameters included habitat-specific carrying capacities, landscape heterogeneity, and the level of resistance to dispersal associated with topography. Movement …

Social Structure Defines Spatial Transmission Of African Swine Fever In Wild Boar, Kim M. Pepin, Andrew J. Golnar, Tomasz Podgórski

United States Department of Agriculture Wildlife Services: Staff Publications

The spatial spread of infectious disease is determined by spatial and social processes such as animal space use and family group structure. Yet, the impacts of social processes on spatial spread remain poorly understood and estimates of spatial transmission kernels (STKs) often exclude social structure. Understanding the impacts of social structure on STKs is important for obtaining robust inferences for policy decisions and optimizing response plans. We fit spatially explicit transmission models with different assumptions about contact structure to African swine fever virus surveillance data from eastern Poland from 2014 to 2015 and evaluated how social structure affected inference of …

Spatial Modeling Of Common Raven Density And Occurrence Helps Guide Landscape Management Within Great Basin Sagebrush Ecosystems, Sarah C. Webster, Shawn T. O'Neil, Brianne E. Brussee, Peter S. Coates, Pat J. Jackson, John C. Tull, David J. Delehanty

Human–Wildlife Interactions

Common ravens (Corvus corax; ravens) are a behaviorally flexible nest predator of several avian species, including species of conservation concern. Movement patterns based on life history phases, particularly territoriality of breeding birds and transiency of nonbreeding birds, are thought to influence the frequency and efficacy of nest predation. As such, predicting where on the landscape territorial resident and non-territorial transient birds may be found in relation to the distribution of sensitive prey is of increasing importance to managers and conservationists. From 2007 to 2019, we conducted raven point count surveys between mid-March and mid-September across 43 different field …

Using Principles Of Seascape Ecology To Consider Relationships Between Spatial Patterning And Mobile Marine Vertebrates In A Seagrass-Mangrove Ecotone In Bimini, Bahamas, Sarah Rebecca Taylor Driscoll

Antioch University Dissertations & Theses

Seagrass meadows and mangrove forests are ecologically and economically important systems that are increasingly threatened by anthropogenic activity. This study used a non-invasive method, baited remote underwater video systems (BRUVS), to observe mobile marine vertebrates in the seagrass-mangrove ecotone in North and South Bimini, the only area where mangroves remain in the northwestern Bahamas. An extensive area of mangroves and seagrass was removed for coastal development in North Bimini, where a marine protected area, the North Bimini Marine Reserve (NBMR), has been under consideration for decades. This research applied principles of seascape ecology to assess species abundance, diversity, and richness …

Effects Of Beaver Dam Analogs On Stream Ecosystem Function Of Crab Creek, Washington State, Nicholas D. Broderius

EWU Masters Thesis Collection

This study documents the effects of beaver dam analogs (BDAs) on nutrient transport, fish community composition, macroinvertebrate drift, and benthic macroinvertebrate communities of Crab Creek, WA, USA. In 2019, the U.S. Fish and Wildlife Service (USFWS), and Natural Resource Conservation Service (NRCS) placed 25 BDAs in Crab Creek on a section of private land near Harrington, WA. Beaver dam analogs are structures placed in streams to mimic the ecosystem effects of beaver activity and are increasingly used as a stream restoration technique. The primary goals of placing these BDAs in the stream was to impound sediment and create a new …

Habitat Selection By Vulnerable Golden Bandicoots In The Arid Zone, Cheryl A. Lohr, Kristen Nilsson, Colleen Sims, Judy Dunlop, Michael T. Lohr

Research outputs 2014 to 2021

In 2010, vulnerable golden bandicoots (Isoodon auratus) were translocated from Barrow Island, Western Australia, to a mainland predator-free enclosure on the Matuwa Indigenous Protected Area. Golden bandicoots were once widespread throughout a variety of arid and semiarid habitats of central and northern Australia. Like many small-to-medium-sized marsupials, the species has severely declined since colonization and has been reduced to only four remnant natural populations. Between 2010 and 2020, the reintroduced population of golden bandicoots on Matuwa was monitored via capture–mark–recapture data collection, which was used in spatially explicit capture–recapture analysis to monitor their abundance over time. In 2014, we used …

A Historical Ecology Of Aridland Springs In Desert National Wildlife Refuge, Nuwu/Nuwuvi (Southern Paiute/Chemehuevi) Ancestral Territory, Nevada, Yarrow Sarah Valentine Geggus

Dissertations and Theses

Aridland springs are among the most threatened ecosystems in the world. Vital to desert ecologies and Indigenous cultures, these complex and individualistic ecosystems have layered histories. To inform management in the changing landscape of Desert National Wildlife Refuge, a 1.6 million acre protected area in Southern Nevada, I conducted a historical ecology study of a sample of ten upland springs. Through a six-part interdisciplinary methodology including interviews, archaeological survey, botanical survey, and archival research, I summarize findings into three broad eras: the Nuwu/Nuwuvi pre-Contact Era, the Settler Era, and the U.S. Fish and Wildlife Service Era.

For millennia, Nuwu/Nuwuvi drank …

Black Vulture Conflict And Management In The United States: Damage Trends, Management Overview, And Research Needs, Bryan M. Kluever, Morgan B. Pfeiffer, Scott C. Barras, Brett G. Dunlap, Lee A. Humberg

Human–Wildlife Interactions

Contrary to rapid declines of many vulture (Accipitridae, Cathartidea) species worldwide, black vulture (Coragyps atratus) populations are increasing and expanding their range in North America. Vultures exhibit complex behaviors and can adapt to any human-dominated landscape or land use. These traits, combined with population growth and range expansion, have contributed to increased human–vulture conflicts. Our goal was to summarize the current status and trends in human–black vulture conflicts (hereafter human–vulture conflicts), review available management strategies, identify knowledge gaps, and provide recommendations to enhance management and understanding of this species and the associated conflicts. We found human–vulture conflicts are …

Core Commitments For Field Trials Of Gene Drive Organisms, Kanya C. Long, Luke Alphey, George J. Annas, Cinnamon S. Bloss, Karl J. Campbell, Jackson Champer, Chun-Hong Chen, Amit Choudhary, George M. Church, James P. Collins, Kimberly L. Cooper, Jason A. Delborne, Owain R. Edwards, Claudia I. Emerson, Kevin Esvelt, Sam Weiss Evans, Robert M. Friedman, Valentino M. Gantz, Fred Gould, Sarah Hartley, Elizabeth Heitman, Janet Hemingway, Hirotaka Kanuka, Jennifer Kuzma, James V. Lavery, Yoosook Lee, Marce Lorenzen, Jeantine E. Lunshof, John M. Marshall, Philipp W. Messer, Craig Montell, Kenneth A. Oye, Megan J. Palmer, Philippos Aris Papathanos, Prasad N. Paradkar, Antoinette J. Piaggio, Jason L. Rasgon, Gordana Rašić, Larisa Rudenko, J. Royden Saah, Maxwell J. Scott, Jolene T. Sutton, Adam E, Vorsino, Omar S. Akbari

United States Department of Agriculture Wildlife Services: Staff Publications

We must ensure that trials are scientifically, politically, and socially robust, publicly accountable, and widely transparent.

Gene drive organisms (GDOs), whose genomes have been genetically engineered to spread a desired allele through a population, have the potential to transform the way societies address a wide range of daunting public health and environmental challenges. The development, testing, and release of GDOs, however, are complex and often controversial. A key challenge is to clarify the appropriate roles of developers and others actively engaged in work with GDOs in decision-making processes, and, in particular, how to establish partnerships with relevant authorities and other …

Genotyping Validates The Efficacy Of Photographic Identification In A Capture-Mark-Recapture Study Based On The Head Scale Patterns Of The Prairie Lizard (Sceloporus Consobrinus), Sarah A. Tomke, Chris J. Kellner

Forestry and Natural Resources Graduate Research

Population studies often incorporate capture‐mark‐recapture (CMR) techniques to gather information on long‐term biological and demographic characteristics. A fundamental requirement for CMR studies is that an individual must be uniquely and permanently marked to ensure reliable reidentification throughout its lifespan. Photographic identification involving automated photographic identification software has become a popular and efficient noninvasive method for identifying individuals based on natural markings. However, few studies have (a) robustly assessed the performance of automated programs by using a double‐marking system or (b) determined their efficacy for long‐term studies by incorporating multi‐year data. Here, we evaluated the performance of the program Interactive Individual …

Landscape-Scale Differences Among Cities Alter Common Species’ Responses To Urbanization, Mason Fidino, Travis Gallo, Elizabeth W. Lehrer, Maureen H. Murray, Cria Kay, Heather A. Sander, Brandon Macdougall, Carmen M. Salsbury, Travis J. Ryan, Julia L. Angstmann, J. Amy Belaire, Barbara Dugelby, Chris Schell, Theodore Stankowich, Max Amaya, David Drake, Sheryl H. Hursh, Adam A. Ahlers, Jacque Williamson, Laurel M. Hartley, Amanda J. Zellmer, Kelly Simon

Scholarship and Professional Work - LAS

Understanding how biodiversity responds to urbanization is challenging, due in part to the single-city focus of most urban ecological research. Here, we delineate continent-scale patterns in urban species assemblages by leveraging data from a multi-city camera trap survey and quantify how differences in greenspace availability and average housing density among 10 North American cities relate to the distribution of eight widespread North American mammals. To do so, we deployed camera traps at 569 sites across these ten cities between 18 June and 14 August. Most data came from 2017, though some cities contributed 2016 or 2018 data if it was …

Spotted Owls And Forest Fire: Comment, Gavin M. Jones, R. J. Gutiérrez, William M. Block, Peter C. Carlson, Emily J. Comfort, Samuel A. Cushman, Raymond J. Davis, Stephanie A. Eyes, Alan B. Franklin, Joseph L. Ganey, Shaula Hedwall, John J. Keane, Rodd Kelsey, Damon B, Lesmeister, Malcolm P. North, Susan L. Roberts, Jeremy T. Rockweit, Jamie S. Sanderlin, Sarah C. Sawyer, Ben Solvesky, Douglas J. Tempel, Ho Yi Wan, A. Leroy Westerling, Gary C. White, M. Zachariah Peery

United States Department of Agriculture Wildlife Services: Staff Publications

Western North American forest ecosystems are experiencing rapid changes in disturbance regimes because of climate change and land use legacies (Littell et al. 2018). In many of these forests, the accumulation of surface and ladder fuels from a century of fire suppression, coupled with a warming and drying climate, has led to increases in the number of large fires (Westerling 2016) and the proportion of areas burning at higher severity (Safford and Stevens 2017, Singleton et al. 2018). While the annual area burned by fire is still below historical levels (Taylor et al. 2016), some forest types in the west …

Comparison Of Native And Non-Native Predator Consumption Rates And Prey Avoidance Behavior In North America And Europe, Ayse Gül Ünlü, John J. Obrycki, Roman Bucher

Entomology Faculty Publications

Novel predator–prey interactions can contribute to the invasion success of non-native predators. For example, native prey can fail to recognize and avoid non-native predators due to a lack of co-evolutionary history and cue dissimilarity with native predators. This might result in a competitive advantage for non-native predators. Numerous lady beetle species were globally redistributed as biological control agents against aphids, resulting in novel predator–prey interactions. Here, we investigated the strength of avoidance behavior of the pea aphid (Acyrthosiphon pisum) toward chemical cues of native lady beetles and non-native Asian Harmonia axyridis and European Coccinella septempunctata and Hippodamia variegata …

Wetland Edge Trampled By American Bison (Bos Bison) Used As Basking Site For Painted Turtles (Chrysemys Picta), Keith Geluso, Carter Kruse, Mary Harner

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Prairies of the Great Plains once were influenced by large-scale disturbances, such as fire and herbivory by large ungulates, that promoted ecosystem functioning. American Bison (Bos bison) created many types of disturbances as they traversed grassland landscapes. Trampling, a common type of bison disturbance, occurred when large herds moved through an area denuding aboveground vegetation, exposing prairie soils, and restarting succession. Bison reintroductions now allow researchers to use contemporary observations to examine influences of these large, hoofed mammals on system functions. Herein, we report on the immediate benefit of trampling along a wetland edge for another vertebrate species. …

Artificial Nightlight Alters The Predator–Prey Dynamics Of An Apex Carnivore, Mark A. Ditmer, David C. Stoner, Clinton D. Francis, Jesse R. Barber, James D. Forster, David M. Choate, Kirsten E. Ironside, Kathleen M. Longshore, Kent R. Hersey, Randy T. Larsen, Brock R. Mcmillan, Daniel D. Olson, Alyson M. Andreasen, Jon P. Beckmann, P. Brandon Holton, Terry A. Messmer, Neil H. Carter

Life Sciences Faculty Research

Artificial nightlight is increasingly recognized as an important environmental disturbance that influences the habitats and fitness of numerous species. However, its effects on wide‐ranging vertebrates and their interactions remain unclear. Light pollution has the potential to amplify land‐use change, and as such, answering the question of how this sensory stimulant affects behavior and habitat use of species valued for their ecological roles and economic impacts is critical for conservation and land‐use planning. Here, we combined satellite‐derived estimates of light pollution, with GPS‐data from cougars Puma concolor (n = 56), mule deer Odocoileus hemionus (n = 263) and locations of cougar‐killed …

Host-Use Patterns Of Canopy-Inhabiting Click Beetles (Coleoptera: Elateridae) In A Lowland Rainforest In Southern Venezuela, Susan Kirmse, Paul J. Johnson

Insecta Mundi

The arboreal click beetle fauna (Coleoptera: Elateridae) in a lowland tropical rainforest in south­ern Venezuela was observed and collected by means of a tower crane for a full year. The evaluation of the elaterid assemblage is part of a general survey of Coleoptera associated with several canopy trees. The Elat­eridae represented the tenth most species-rich beetle family in the canopy of the crane plot and was therefore selected for a detailed analysis of host-use patterns. In total, 20 species of Elateridae with 402 adult indi­viduals were sampled, including seven singletons. Species were either flower visiting (Aeolus Eschscholtz and Cosmesus …

The Role Of Microhabitats In Structuring Cave Invertebrate Communities In Guatemala, Gabrielle S.M. Pacheco, Marconi Souza Silva, Enio Cano, Rodrigo L. Ferreira

International Journal of Speleology

Several studies have tried to elucidate the main environmental features driving invertebrate community structure in cave environments. They found that many factors influence the community structure, but rarely focused on how substrate types and heterogeneity might shape these communities. Therefore, the objective of this study was to assess which substrate features and whether or not substrate heterogeneity determines the invertebrate community structure (species richness and composition) in a set of limestone caves in Guatemala. We hypothesized that the troglobitic fauna responds differently to habitat structure regarding species richness and composition than non-troglobitic fauna because they are more specialized to live …

Fire As A Fundamental Ecological Process: Research Advances And Frontiers, Megan Cattau

Human-Environment Systems Research Center Faculty Publications and Presentations

1. Fire is a powerful ecological and evolutionary force that regulates organismal traits, population sizes, species interactions, community composition, carbon and nutrient cycling and ecosystem function. It also presents a rapidly growing societal challenge, due to both increasingly destructive wildfires and fire exclusion in fire‐dependent ecosystems. As an ecological process, fire integrates complex feedbacks among biological, social and geophysical processes, requiring coordination across several fields and scales of study.
2. Here, we describe the diversity of ways in which fire operates as a fundamental ecological and evolutionary process on Earth. We explore research priorities in six categories of fire ecology: (a) characteristics …

The Effects Of Elevation On Foraging Behavior Of Bats In Southern Appalachia, Victoria Long

Electronic Theses and Dissertations

There are limited studies on bat activity in higher elevations in the Appalachian region. Levels of bat activity were compared in south central Appalachia at low (< 914.4 m) and high (> 1, 524 m) elevations in open, forest edge, and riparian habitats. Additionally, habitat suitability was modeled for a common species, big brown bat (Eptesicus fuscus). The study started May 27^th 2019, and sites were monitored biweekly until October 2^nd 2019. Six species and one genus were recorded during the study. Species from the Myotis genus were grouped together because of similar call characteristics. Results show that species were significantly more …

Ecoacoustic Methods For Multi-Taxa Animal Surveys In The Amazon, Leandro A. Do Nascimento

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Tropical regions host most of the biodiversity found on Earth, but these species-rich areas are constantly threatened by human development and other disturbances that put this diversity of life forms at risk. To avoid extirpations of animal and plant species, scientists and managers rely on accurate monitoring techniques to retrieve information about population trends. This task is not easy, especially in the tropics, where there is often a lack of personnel to conduct surveys, a lack of funding, and the areas are so extensive that many countries need to be involved in monitoring (e.g., Amazon biome). For this reason, scientists …

Seasonal Variation Of Bacterial Diversity Along The Marine Particulate Matter Continuum, Mireia Mestre, Juan Höfer, M. Montserrat Sala, Josep M. Gasol

Research outputs 2014 to 2021

© Copyright © 2020 Mestre, Höfer, Sala and Gasol. Seasonal dynamics of ocean prokaryotic communities in the free-living fraction have been widely described, but less is known about the seasonality of prokaryotes inhabiting marine particles. We describe the seasonality of bacterial communities in the particulate matter continuum by sampling monthly over two years in a temperate oligotrophic coastal ecosystem and using a serial filtration (including six size-fractions spanning from 0.2 to 200 μm). We observed that bacterial communities in the particulate matter continuum had annual changes following harmonic seasonal oscillations, where alpha, beta, and gamma diversity increased during the warm …

Floodplain Forest Regeneration Dynamics In The Lower Mississippi River Alluvial Valley, Whitney Anne Kroschel

LSU Doctoral Dissertations

Floodplain forest species diversity is driven, in part, by variation in disturbance regime. Flood patterns create heterogeneity in microsite quality from small differences in elevation across a floodplain which, in turn, influence flood timing and duration. Differences in species’ regeneration niches in relation to hydrologic patterns can account for long-term coexistence of various species. In the past century floodplain forests have exhibited a wide range of changes in stand development and species composition as a result of altered hydrology in rivers and floodplains. I evaluated the role of regeneration in floodplain forest systems of the Lower Mississippi River Alluvial Valley …

Using Soil Geospatial Properties And Environments To Explore Microbial Diversity, Sharon Faye Smith

Graduate Theses and Dissertations

Soil microorganisms help maintain nutrient cycling, control carbon sequestration, impact plant productivity, and influence several soil chemical and physical properties; yet, the processes that control the microbial composition of soil and how environmental changes may affect the composition and activity of these organisms at different scales remains a difficult and intriguing puzzle for soil scientists, ecologists, and modelers. Wetlands are endangered and important ecosystems that provide several services, which are directly linked to soil function. However, few wetland assessments consider the soil environment and microbial ecology. Linking soil microbial community composition and distribution patterns to soil physio-chemical properties would provide …

Leaf Traits And Performance Vary With Plant Age And Water Availability In Artemisia Californica, Jennifer L. Funk, Julie E. Larson, Gregory Vose

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Background and aims
Leaf functional traits are strongly tied to growth strategies and ecological processes across species, but few efforts have linked intraspecific trait variation to performance across ontogenetic and environmental gradients. Plants are believed to shift towards more resource-conservative traits in stressful environments and as they age. However, uncertainty in how intraspecific trait variation aligns with plant age and performance in the context of environmental variation may limit our ability to use traits to infer ecological processes at larger scales.

Methods
We measured leaf physiological and morphological traits, canopy volume, and flowering effort for Artemisia californica (California sagebrush), a …

Photographic Validation Of Target Versus Nontarget Take Of Brown Treesnake Baits, Shane R. Siers, Aaron B. Shiels, Cynthia G. Payne, Francinem M. Chlarson, Craig S. Clark, Stephen M. Mosher

United States Department of Agriculture Wildlife Services: Staff Publications

Use of toxic baits or other tools for managing nuisance species must ensure that the species of interest is adequately targeted while exposure to nontarget species is minimized. Nontarget takes of acetaminophen‐laced baits for control of invasive brown treesnakes (Boiga irregularis) on Guam may put those animals at risk of lethal intoxication and render the bait unavailable to the intended target species. We used wildlife cameras to identify species removing toxic and nontoxic baits from brown treesnake bait stations designed to exclude nontarget taxa in 2015 and 2016. Throughout various sites and habitat types, and balanced by season (wet vs. …

Public Perspectives And Media Reporting Of Wolf Reintroduction In Colorado, Rebecca Niemiec, Richard E.W. Berl, Mireille Gonzalez, Tara Teel, Cassiopeia Camara, Matthew Collins, Jonathan Salerno, Kevin Crooks, Courtney Schultz, Stewart Breck, Dana Hoag

United States Department of Agriculture Wildlife Services: Staff Publications

In the state of Colorado, a citizen ballot initiative to reintroduce gray wolves (Canis lupus) is eliciting polarization and conflict among multiple stakeholder and interest groups. Given this complex social landscape, we examined the social context surrounding wolf reintroduction in Colorado as of 2019. We used an online survey of 734 Coloradans representative in terms of age and gender, and we sampled from different regions across the state, to examine public beliefs and attitudes related to wolf reintroduction and various wolf management options. We also conducted a content analysis of media coverage on potential wolf reintroduction in 10 major daily …

Chapter 002 - Streams, Janice M. Glime

Bryophyte Ecology Volume 4: Habitat and Role

Explore the contents of Bryophyte Ecology, Volume 4, Chapter 2 - Streams by clicking the links above. For the Contents section of this ebook, as well as Volumes 1 through 5, please visit the Bryophyte Ecology Main Page.

Use CTRL+F to easily search within PDF files.

Ebook sponsored by Michigan Technological University and the International Association of Bryologists.

Characteristics And Spatial Heterogeneity Of Prescribed Fire Behavior In North Dakota Grasslands, Megan Elizabeth Zopfi

Theses and Dissertations

Fire is a critical physical and chemical process required to sustain many grassland ecosystems. In North America, observations of grassland fire behavior in warm-season, southern grasslands are commonly used in fire behavior modeling efforts across the Great Plains. However, grasslands of the northern Great Plains contain a greater component of cool-season vegetation that may generate different fire behavior. To further our understanding of prescribed fire behavior in North Dakota grasslands, we quantified fuel, weather, and fire behavior characteristics associated with 27 prescribed fires conducted across three sites in North Dakota. We sampled 27 points on each fire arranged into a …

A Comparative Ecological Study Of Limestone And Dolomite Glades In The Ozark Mountains Of Northwest Arkansas, Brittney Booth

Graduate Theses and Dissertations

Glades are one of the many habitats that exist in the Arkansas Ozarks and contribute to the overall biodiversity of the state of Arkansas. For this study, five dolomite glades and five limestone glades in the Ozarks of northwest Arkansas were studied from March to October in the years 2017 and 2018 to determine the similarities or differences that might be present. One hundred and fifteen vascular plant taxa were documented in the dolomite glades and one hundred and three vascular plant taxa were documented in the limestone glades. Forty-six vascular plant taxa were unique to the dolomite glades and …

Characterizing The Impacts Of The Invasive Hemlock Woolly Adelgid On The Forest Structure Of New England, Peter Brehm Boucher

Graduate Doctoral Dissertations

Climate change is raising winter temperatures in the Northeastern United States, both expanding the range of an invasive pest, the hemlock woolly adelgid (HWA; Adelges tsugae), and threatening the survival of its host species, eastern hemlock (Tsuga canadensis). As a foundation species, hemlock trees underlie a distinct network of ecological, biogeochemical, and structural systems that will likely disappear as the HWA infestation spreads northward. Remote sensing can offer new perspectives on this regional transition, recording the progressive loss of an ecological foundation species and the transition of evergreen hemlock forest to mixed deciduous forest over the course of the infestation. …