Digital Commons Network^™

The Skiles Mummy: Care Of A Debilitated Hunter-Gatherer Evidenced By Coprolite Studies And Stable Isotopic Analysis Of Hair, Kirsten A. Verostick, Isabel Teixeira-Santos, Vaughn M. Bryant Jr., Karl Reinhard

Karl Reinhard Publications

The Skiles Mummy (SMM), a naturally mummified adult male from the late archaic period of Lower Pecos Canyonlands of South Texas, represents a unique case of care. SMM is an exceptional mummy within this region due to both the retention of a full head of hair, and having a diagnosed case of megacolon, a complication commonly associated with Chagas disease caused by Trypanosoma cruzi. Stable isotopic analysis of his hair is consistent with a diet incorporating of C₄/CAM plants with some C₃ plants, freshwater resources, and higher trophic level animals. However, the segments of hair most …

Risk Of Predation: A Critical Force Driving Habitat Quality Perception And Foraging Behavior Of Granivorous Birds In A Nigerian Forest Reserve, Umarfarooq A. Abdulwahab, Samuel Temidayo Osinubi, Jacinta Abalaka

Ecology Center Publications

Background: Understanding the factors that influence the foraging behavior and perception of habitat quality by animals has long been the focus in ecology. Due to the direct effect resource acquisition has on an individual’s fitness and species’ survival, predation risk is considered widely to be a major driver of foraging decision. The objectives of this study were to investigate how predation risk is perceived by granivorous bird species with respect to different habitat and microhabitat types, time of day and food types in Amurum Forest Reserve, Nigeria, with a view to direct future conservation planning.

Methods: For 3 months, we …

Diversity And Abundance Of Soil Microbes Differ Along A Forest-Pasture Transect, Hannah Suli, Ashley Schumann, Cleo Bickley, Jasmine Rodriguez

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

No abstract provided.

Bourbon Virus In Wild And Domestic Animals, Missouri, Usa, 2012–2013, Katelin C. Jackson, Thomas Gidlewski, J. Jeffrey Root, Angela M. Bosco-Lauth, R. Ryan Lash, Jessica R. Harmon, Aaron C. Brault, Nicholas A. Panella, William L. Nicholson, Nicholas Komar

United States Department of Agriculture Wildlife Services: Staff Publications

Bourbon virus (BRBV) was first isolated from a febrile patient with a history of tick bites in Bourbon County, Kansas, USA; the patient later died from severe illness in 2014 (1). Several additional human BRBV infections were reported subsequently from the midwestern and southern United States (2). BRBV belongs to the family Orthomyxoviridae, genus Thogotovirus, which is distributed worldwide and includes Araguari, Aransas Bay, Dhori, Jos, Thogoto, and Upolu viruses (1,3). Thogoto and Dhori viruses have been associated with human disease (4–6). Viruses within the genus Thogotovirus have been associated with hard or soft ticks (7). Recent studies suggest that …

New Wilson’S Phalarope Nesting Record From The Central Platte River Valley, Mormon Island, Hall County, Nebraska, Andrew J. Caven, Bethany L. Ostrom, Aurora Fowler, Joshua D. Wiese, Kelsey C. King

Nebraska Bird Review

The southeastern portion of the Wilson’s Phalarope’s (Phalaropus tricolor) breeding range encompasses parts of Nebraska (Colwell and Jehl 1994), including the Sandhills and northern Panhandle (Silcock and Jorgensen 2018). Additionally, there have been a number of breeding records from southcentral and southeastern Nebraska within the Rainwater Basin ecoregion since the mid-1990s (Mollhoff 2016, Silcock and Jorgensen 2018). However, there is very little evidence of regular breeding activity in the nearby Central Platte River Valley (CPRV), which spans from Chapman west to Overton, Nebraska, and is considered a globally important area for waterbirds (Johnsgard and Brown 2013, Silcock and Jorgensen 2018). …

Summer Field Report, June - July 2019, W. Ross Silcock

Nebraska Bird Review

There was a lot to ponder this summer, including several notable breeding records of waterbirds, including the 3rd for Canvasback and an “unprecedented” breeding season for Eared Grebe in the Rainwater Basin. Intriguing summer occurrences that might presage or indicate nesting were large numbers of Redhead and Ring-necked Duck in larger wetlands, the 3rd Jun record of Dusky Flycatcher, first Jun record of Baird’s Sparrow, 3rd summer record of Ash-throated Flycatcher, and a Sage Thrasher in Jun in Kimball County. Additional breeding records of interest were the 10 Peregrine Falcons fledged at three Omaha sites, possible nesting by Mississippi Kites …

The Nebraska Bird Review, Volume 87 September 2019 Number 3

Nebraska Bird Review

Summer Field Report, June - July 2019, by W. Ross Silcock …74-95

2018 (30th) Report of the NOU Records Committee, by Mark A. Brogie … 96-109

New Wilson's Phalarope Nesting Record from the Central Platte River Valley, Mormon Island, Hall County, Nebraska by Andrew J. Caven, Bethany Ostrom, Aurora Fowler, Joshua D. Wiese, Kelsey C. King …110-114

Subscription and Organization Information …115

Sex, Scents, And Cephalopods: Factors That Affect Social And Reproductive Behavior In Chambered Nautilus And Oval Squid, Naomi J. Lewandowski

Dissertations, Theses, and Capstone Projects

Cephalopods are a highly specialized group of molluscs that show a wide range of behavioral patterns. Chambered nautilus (Nautilus pompilius) and oval squid (Sepioteuthis lessoniana) are two very distinct species of cephalopod that both provide unique insight into cephalopod reproductive and social behavior. In experiments utilizing both species, I aimed to fill in knowledge gaps in a range of reproductive behaviors from fundamental responses to conspecifics, to preferred mating habitat.

In Chapter 1 and 2 I tested individual nautiluses in a Y-maze where recipients were exposed to paired odors of two donor nautiluses. I collected data …

Information Resources For Animal Control And Wildlife Damage Management, Stephen M. Vantassel, Michael W. Fall, Serge Lariviére

Wildlife Damage Management Technical Series

A bumper sticker reads, “If you think education is expensive, you oughta try ignorance.” That statement could not be truer in regard to wildlife damage management. Being willing to learn is a critical attitude for everyone involved in wildlife damage management. Since wildlife damage management intersects so many other disciplines, no single person can be an expert in all of them. In addition, the arrival of an invasive species, changes in building practices (e.g., egress windows, ridge vents), or the implementation of new regulations can confound traditional practices and require new control methods. Thus, it is important to provide a …

Predicting Functional Responses In Agro-Ecosystems From Animal Movement Data To Improve Management Of Invasive Pests, Mark Q. Wilber, Sarah M. Chinn, James C. Beasley, Raoul K. Bourghton, Ryan K. Brooks, Stephen S. Ditchkoff, Justin W. Fischer, Steve B. Hartley, Lindsey K. Holmstrom, John C. Kilgo, Jesse S. Lewis, Ryan S. Miller, Nathan P. Snow, Kurt C. Vercauteren, Samantha M. Wisely, Colleen T. Webb, Kim M. Peen

United States Department of Agriculture Wildlife Services: Staff Publications

Functional responses describe how changing resource availability affects consumer resource use, thus providing a mechanistic approach to prediction of the invasibility and potential damage of invasive alien species (IAS). However, functional responses can be context dependent, varying with resource characteristics and availability, consumer attributes, and environmental variables. Identifying context dependencies can allow invasion and damage risk to be predicted across different ecoregions. Understanding how ecological factors shape the functional response in agro-ecosystems can improve predictions of hotspots of highest impact and inform strategies to mitigate damage across locations with varying crop types and availability. We linked heterogeneous movement data across …

The Evolution Of Reproductive Complexity In Fishes, Frieda Benun

Dissertations, Theses, and Capstone Projects

How does reproductive complexity evolve? In this dissertation, I investigate the evolution of parental investment and mating behavior, using both macro- and microevolutionary lenses. I use fishes, the most diverse group of vertebrates, comprising over 30,000 species, as a model to study the evolution of these traits.

In Chapter 1, I introduce the evolution of parental behaviors in fishes. I present a systematic review of parental care for 294 families (close to 60%) of bony fish and show that male-only care is the predominant form of care in this group. I summarize current theories on parental care, emphasizing external fertilization, …

Systematics Of Carex Section Laxiflorae (Cyperaceae), Jenna Dorey

Dissertations, Theses, and Capstone Projects

Carex, with more than 2100 species, is the most species-rich genus of flowering plants in temperate regions of the world. Members of the family Cyperaceae are colloquially known as sedges, and members of the genus Carex are called “true sedges.” Carex occur on every continent except for Antarctica, they thrive in a panoply of habitats, and are ecologically important as a forage source for wildlife, carbon sequestration, prevention of soil erosion, and providing habitat for fresh water invertebrates. Despite their importance many sedges are still poorly known, such as the woodland sedges in Carex section Laxiflorae, which is …

Multi-Scale Predictors Of Parasite Risk In Wild Male Savanna Baboons (Papio Cynocephalus), Bobby Habig, David A.W.A.M. Jansen, Mercy Y. Akinyi, Laurence R. Gesquiere, Susan C. Alberts, Elizabeth A. Archie

Publications and Research

Several factors are thought to shape male parasite risk in polygynous and polygynandrous mammals, including male-male competition, investment in potentially immunosuppressive hormones, and dispersal. Parasitism is also driven by processes occurring at larger scales, including host social groups and populations. To date, studies that test parasite-related costs of male behavior at all three scales—individual hosts, social groups, and the host population—remain rare. To fill this gap, we investigated multi-scale predictors of helminth parasitism in 97 male savanna baboons (Papio cynocephalus) living in the Amboseli ecosystem in Kenya over a 5-year span. Controlling for multi-scale processes, we found that many of …

Geographic Population Structure And Taxonomic Identity Of Rhinichthys Osculus, The Santa Ana Speckled Dace, As Elucidated By Nuclear Dna Intron Sequencing, Liane Raynette Greaver

Electronic Theses, Projects, and Dissertations

Rhinichthys osculus (Cyprinidae), the speckled dace, is the most widely distributed freshwater fish in the western United States. The southern California populations of R. osculus are identified as the Santa Ana speckled dace (SASD), though the SASD has not yet been formally recognized as a distinct taxon. Current mtDNA analysis performed in the Metcalf Lab has shown a reciprocally monophyletic relationship among three California regions; southern, central coast, and Owens Valley. Similarly, microsatellite genotyping has shown significant levels of geographic population structure. The purpose of this study was to provide nuclear DNA sequence data to determine the taxonomic status of …

Thermal Cues Drive Plasticity Of Desiccation Resistance In Montane Salamanders With Implications For Climate Change, Eric A. Riddell, Emma Y. Roback, Christina E. Wells, Kelly R. Zamudio, Michael W. Sears

Publications

Organisms rely upon external cues to avoid detrimental conditions during environmental change. Rapid water loss, or desiccation, is a universal threat for terrestrial plants and animals, especially under climate change, but the cues that facilitate plastic responses to avoid desiccation are unclear. We integrate acclimation experiments with gene expression analyses to identify the cues that regulate resistance to water loss at the physiological and regulatory level in a montane salamander (Plethodon metcalfi). Here we show that temperature is an important cue for developing a desiccation-resistant phenotype and might act as a reliable cue for organisms across the globe. …

Landscape Factors That Influence European Starling (Sturnus Vulgaris) Nest Box Occupancy At Nasa Plum Brook Station (Pbs), Erie County, Ohio, Usa, Morgan Pfeiffer, Thomas W. Seamans, Bruce N. Buckingham, Bradley F. Blackwell

United States Department of Agriculture Wildlife Services: Staff Publications

During the last decade at NASA Plum Brook Station (PBS), Erie County, Ohio, United States, there has been a nearly 50% decrease in European Starling (Sturnus vulgaris) occupancy (nests with ≥1 egg) of nest boxes designed to be used by starlings. Increased availability of natural cavities, from invertebrate pests, might have altered nest box occupation rates. It was hypothesized that starling nest box occupation rates would be a function of an index of potentially suitable tree cavities for nesting starlings, the semi-colonial nature of breeding starlings, and access to foraging areas (e.g., mowed lawns near buildings). Specifically, it was predicted …

Innate Antibodies, Murine Models, And Evolution: A Study Of Trypanosome Lytic Factor Functions And Their Translational Applications, Joseph P. Verdi

Dissertations, Theses, and Capstone Projects

Trypanosome lytic factors (TLFs) are primate-specific antimicrobial protein complexes that lyse African trypanosome parasites by delivering the channel-forming toxin APOL1 to the invading microorganisms. Human serum contains two TLFs that are delivered to the parasite by separate mechanisms, only one of which has been characterized. TLF1 is endocytosed by a receptor that is typically blocked by other serum factors in vivo, suggesting that TLF2 is the more relevant lytic factor in the context of trypanosome immunity. TLF2 is non-covalently associated with polyclonal immunoglobulin M (IgM) antibodies, which we report here to be involved in the uptake mechanism. The TLF2-IgMs …

Neotype Designation For Pectinibuthus Birulai Fet, 1984 (Scorpiones: Buthidae) From Turkmenistan, With Remarks On Pectine Teeth Of Psammophile Scorpions, Victor Fet, František Kovařík, Graeme Lowe

Euscorpius

A neotype is designated for a very rare Central Asian scorpion, Pectinibuthus birulai Fet, 1984, the sole species of the genus Pectinibuthus Fet, 1984. It is the only currently known specimen, collected by Victor Fet in July 1985, and deposited in ZISP (St. Petersburg, Russia). The original types are considered lost. Detailed photographs of the neotype are provided, as well as comments on this unique psammophile buthid. We also discuss and compare pectinal tooth counts of psammophile scorpions relative to other scorpions.

Multiscale Collection And Analysis Of Submerged Aquatic Vegetation Spectral Profiles For Eurasian Watermilfoil Detection, Colin Brooks, Amanda Grimm, Amy Marcarelli, Richard Dobson

Michigan Tech Publications, Part 1

The ability to differentiate a non-native aquatic plant, Myriophyllum spicatum (Eurasian watermilfoil or EWM), from other submerged aquatic vegetation (SAV) using spectral data collected at multiple scales was investigated as a precursor to mapping of EWM. Spectral data were collected using spectroradiometers for SAV taken out of the water, from the side of a boat directly over areas of SAV and from a lightweight portable radiometer system flown from an unmanned aerial system (UAS). EWM was spectrally different from other SAV when using 651 spectral bands collected in ultraviolet to near-infrared range of 350 to 1000 nm but does not …

The Finch Effect: Evolutionary Metaphors And Illiberal Democracy In Central And Eastern Europe, Abigail Woodfield

Claremont-UC Undergraduate Research Conference on the European Union

In recent years, several states in Central and Eastern Europe have seen democratic digression. Such illiberal resurgences came as a surprise to the many political scientists who assumed that the future of these states was democratic. Indeed, after the fall of the Soviet Union, the world largely regarded liberal democracy as the predominant system of government. The future seemed bright, and it was tempting to understand that future in evolutionary terms—just as humans evolved under natural selection to become the dominant species, democracy had survived a similar competition and defeated all other systems of government to become the dominant regime. …

The Missing Angle: Ecosystem Consequences Of Phenological Mismatch, Karen H. Beard, Katharine C. Kelsey, A. Joshua Leffler, Jeffrey M. Welker

Ecology Center Publications

Climate change leads to unequal shifts in the phenology of interacting species, such as consumers and their resources, leading to potential phenological mismatches. While studies have investigated how phenological mismatch affects wild populations, we still lack studies and a framework for investigating how phenological mismatch affects ecosystems, particularly nutrient cycling.

Design And Implementation Of Degenerate Qpcr/Qrt-Pcr Primers To Detect Microbial Nitrogen Metabolism In Wastewater And Wastewater-Related Samples, Ryan F. Keeley

USF Tampa Graduate Theses and Dissertations

Nitrogen cycling processes can be tracked using quantitative Polymerase Chain Reaction (qPCR) to determine the presence and qReverse Transcriptase-PCR (qRT-PCR) to determine expression of key genes, or ‘biological markers’, for nitrogen metabolism. Nitrification is catalyzed in part, by two enzymes: ammonia monooxygenase (AMO; NH3 NH2OH) and nitrite oxidoreductase (NXR; NO2- NO3-). For denitrification, four enzymes act sequentially: nitrate reductase (NAR/NAP; NO3- NO2-), nitrite reductase (NIR; NO2- NO), nitric oxide reductase (NOR; NO  N2O), and nitrous oxide reductase (NOS; N2O  N2). A principle of wastewater treatment (WWT) is to remove excess nitrogen by taking advantage of natural nitrogen cycling …

Comparison Of The Efficacy Of Four Drug Combinations For Immobilization Of Wild Pigs, Christine K. Ellis, Morgan E. Wehtje, Lisa L. Wolfe, Peregrine L. Wolff, Clayton D. Hilton, Mark C. Fisher, Shari Green, Michael P. Glow, Joeseph M. Halseth, Michael J. Lavelle, Nathan P. Snow, Eric H. Vannatta, Jack C. Rhyan, Kurt C. Vercauteren, William R. Lance, Pauline Nol

United States Department of Agriculture Wildlife Services: Staff Publications

Field immobilization of native or invasive wild pigs (Sus scrofa) is challenging. Drug combinations commonly used often result in unsatisfactory immobilization, poor recovery, and adverse side effects, leading to unsafe handling conditions for both animals and humans. We compared four chemical immobilization combinations, medetomidine–midazolam–butorphanol (MMB), butorphanol–azaperone–medetomidine (BAM™), nalbuphine–medetomidine–azaperone (NalMed-A), and tiletamine– zolazepam–xylazine (TZX), to determine which drug combinations might provide better chemical immobilization of wild pigs. We achieved adequate immobilization with no post-recovery morbidity withMMB. Adequate immobilization was achieved with BAM™; however, we observed post-recovery morbidity. Both MMB and BAM™ produced more optimal results relative to body temperature, recovery, and …

A Comparison Of Individual Learning And Social Learning In Zebrafish Through An Ethorobotics Approach, Yanpeng Yang, Romain J. G. Clément, Stefano Ghirlanda, Maurizio Porfiri

Publications and Research

Social learning is ubiquitous across the animal kingdom, where animals learn from group members about predators, foraging strategies, and so on. Despite its prevalence and adaptive benefits, our understanding of social learning is far from complete. Here, we study observational learning in zebrafish, a popular animal model in neuroscience. Toward fine control of experimental variables and high consistency across trials, we developed a novel robotics-based experimental test paradigm, in which a robotic replica demonstrated to live subjects the correct door to join a group of conspecifics. We performed two experimental conditions. In the individual training condition, subjects learned the correct …

Vision In An Abundant North American Bird: The Red-Winged Blackbird, Esteban Fernández-Juricic, Patrice E. Baumhardt, Luke P. Tyrrell, Amanda Elmore, Shelagh T. Deliberto, Scott J. Werner

United States Department of Agriculture Wildlife Services: Staff Publications

Avian vision is fundamentally different from human vision; however, even within birds there are substantial between species differences in visual perception in terms of visual acuity, visual coverage, and color vision. However, there are not many species that have all these visual traits described, which can constrain our ability to study the evolution of visual systems in birds. To start addressing this gap, we characterized multiple traits of the visual system (visual coverage, visual acuity, centers of acute vision, and color vision) of the Red-winged Blackbird (Agelaius phoeniceus), one of the most abundant and studied birds in North America. We …

A New Species Of Catalinia Soleglad Et Al., 2017 (Scorpiones: Vaejovidae) From Southern California, Usa, Rolando Teruel, Brandon Myers

Euscorpius

Herein we describe a new species of the vaejovid scorpion genus Catalinia Soleglad, Ayrey, Graham & Fet, 2017. It was collected in a single locality of the northwestern foothills of the Santa Ana Mountains. It is most closely related to both Catalinia andreas (Gertsch & Soleglad, 1972) and C. minima (Kraepelin, 1911), but is clearly distinguished by tegumentary sculpture, morphometric ratios and pectinal tooth counts. The new species is described and illustrated in detail, with some ecological data included; moreover, a minor correction is introduced to the diagnosis of the genus.

Factors Affecting Waterfowl Diversity At Wetland Area, Punjab (Pakistan), Zahid Bhatti, Fakhra Nazir, Inayatullah Malik

Journal of Bioresource Management

Different wetlands are being selected through WWF to improve their conditions and to create awareness about their importance in public of Pakistan. The study will help in providing sound basis for the future conservation activities and management of waterfowl population, on sounder footing. The study was conducted at Marala wetlands from October 2000 to September 2001. The State of Jammu and Kashmir lies in the north. Three rivers, i.e., Tawi, Chenab and Manawar Tawi, coming from Jammu and Kashmir, flow into Game Reserve and meet to enter the Head Marala water storage reservoir. At river Jammu Tawi, 58 species of …

Low Secondary Risks For Captive Coyotes From A Sodium Nitrite Toxic Bait For Invasive Wild Pigs, Nathan P. Snow, Katherine E. Horak, Simon T. Humphrys, Linton D. Staples, David G. Hewitt, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

An acute toxic bait is being developed to deliver micro‐encapsulated sodium nitrite (SN) to stimulate severe methemoglobinemia and humane death for invasive wild pigs (Sus scrofa), thereby providing a new tool for reducing their populations. During April 2016, we evaluated sensitivity to SN and outcomes of secondary consumption in the ubiquitous mammalian scavenger, coyote (Canis latrans), to determine secondary risks of consuming carcasses of wild pigs that died from consuming the SN toxic bait. At the National Wildlife Research Center in Fort Collins, Colorado, USA, we first evaluated whether coyotes fed carcasses of domestic pigs killed by consumption of SN …

Comparison Of Play Frequency In Four Sympatric Monkey Species In Kibale National Park, Uganda, Sara G. Lucci

Theses and Dissertations

This study describes play in red colobus (Procolobus rufomitratus), grey-cheeked mangabeys (Lophocebus albigena), black-and-white colobus (Colobus guereza), and redtail monkeys (Cercopithecus ascanius) to test Instinct-Practice Theory. Solitary locomotor play was different among the species. Rough-and-tumble play was different between male and female redtail monkeys. These results partially support Instinct-Practice Theory.

What We (Don’T) Know About Global Plant Diversity, William K. Cornwell, William D. Pearse, Rhiannon L. Dalrymple, Amy E. Zanne

Ecology Center Publications

The era of big biodiversity data has led to rapid, exciting advances in the theoretical and applied biological, ecological and conservation sciences. While large genetic, geographic and trait databases are available, these are neither complete nor random samples of the globe. Gaps and biases in these databases reduce our inferential and predictive power, and this incompleteness is even more worrisome because we are ignorant of both its kind and magnitude. We performed a comprehensive examination of the taxonomic and spatial sampling in the most complete current databases for plant genes, locations and functional traits. To do this, we downloaded data …