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Bibliography, Charles H. Smith

Faculty/Staff Personal Papers

Bibliography of publications by Charles H. Smith.

The Smell Of Fear: Responses Of Native And Invasive Geckos To Predator Scent Cues On Moorea, French Polynesia, Haley Dreisbach, Tessa Bodo

Williams Honors College, Honors Research Projects

Hemidactylus frenatus, a globally invasive species, is syntopic with the native gecko Lepidodactylus lugubris on the island of Moorea, French Polynesia. The success of an invasive species, H. frenatus can be attributed to many factors and is the subject of much study. Some research suggests that invasive and native geckos may differ in their response to chemosensory cues from predators. We compared the responses of H. frenatus and L. lugubris to the scents of both a native local predator; centipede, and a common predator of geckos that is not present on Moorea; snake. While neither gecko species showed any …

Compliance And Roughness In Relation To Gecko Locomotion, Brooklynn Campbell

Williams Honors College, Honors Research Projects

Geckos move efficiently through a variety of substrates, from swaying branches to wooden fences to the sides of structures. Previous studies have studied locomotion and adhesion on manmade and rough substrates; however, the work is limited when discussing locomotion and adhesion as a relationship of compliance and roughness. Ease of movement was quantified by speed, under the assumption that the faster a gecko moves, the easier it is for the gecko to cross the substrate. Gehyra oceanica geckos from Moorea, French Polynesia were tested on substrates varying in compliance and roughness with four different treatments in total. Compliance, roughness, and …

Animal Personality And Sentience As Distinct Concepts, Mark Briffa

Animal Sentience

Owens et al (2024) discuss how knowledge of both animal personality and sentience in target populations can be leveraged to enhance wildlife conservation programmes. In this commentary I expand on the distinction between these two concepts. Behavioural differences should be considered broadly across conservation programmes, not just those involving species deemed sentient.

Habitat Selection And Connectivity Of Mountain Lions (Puma Concolor) Across Anthropogenic Barriers On The Olympic Peninsula: A Multi-Method Comparison, Thomas R. Barbee

Graduate Student Theses, Dissertations, & Professional Papers

Designing and maintaining effective wildlife corridors is an increasingly important conservation challenge in today’s fragmenting landscapes. GPS-based resource selection functions and camera-based occupancy models are both well-established staples of wildlife connectivity analyses and corridor planning, but each have notable trade-offs in cost and data resolution. Wildlife organizations worldwide rely heavily on camera-based occupancy modelling to plan wildlife corridors, especially where resource limitations or ethical concerns prohibit the use of GPS tags. If spatial connectivity maps from occupancy models could be shown to capture the essential elements of animal movement well enough to identify functionally equivalent corridors to those identified in …

Is Mitigation Translocation An Effective Method For Reducing Laysan Albatross–Military Aircraft Collisions?, Brian E. Washburn, Katherine D. Rubiano, William P. Bukoski

Human–Wildlife Interactions

Wildlife–aircraft collisions (wildlife strikes) pose a serious risk to civil and military aircraft. Each year, Laysan albatrosses (Phoebastria immutabilis) attempt to establish a breeding colony on the airfield at the U.S. Navy’s Pacific Missile Range Facility (PMRF) located on the island of Kaua‘i, Hawai‘i, USA, resulting in a hazard to safe military aircraft operations at this facility. A long-term management program, with an emphasis on mitigation translocation (e.g., live-capture and translocation away from the area) of problematic individuals, has been conducted by the U.S. Department of Agriculture, Wildlife Services. However, the efficacy of mitigation translocation as a nonlethal …

Assessing The Effectiveness Of Natural Wood Treatments Against Eastern Subterranean Termite (Reticulitermes Flavipes) Damage: A Comparative Study, Emma Goettel

Williams Honors College, Honors Research Projects

This research is to discover alternative natural chemical cues to the use of borates to deter Eastern Subterranean Termites (R. flavipes) that remain in place in areas of high moisture content. Common sources of food for Eastern Subterranean Termites include materials that are high in cellulose content. As one of these sources, wood, is an abundantly used material in society such as in home construction, research into potential methods to make this material less susceptible to termite predation is an area of public interest. The current method of deterrence is pressure treatment of wood with Borates as they disrupt the …

Maximum Entropy Species Distribution Modeling For The Spring Ephemeral Herb Bloodroot (Sanguinaria Canadensis) In Eastern North America, Velan Manivannan

Williams Honors College, Honors Research Projects

The spring ephemeral plant Bloodroot (Sanguinaria canadensis) has a widespread native range in North America, spanning much of the eastern United States and Canada. While its current NatureServe conservation status is designated as ‘secure’ (NatureServe, 2023), its status as a spring ephemeral places it at a heightened risk for climate change-induced phenological mismatch with advancing forest canopy closure. Additionally, under continued anthropogenic climate change, Bloodroot may also experience range shifts or contractions as the edges of its present range warm past physiological thresholds. To determine the potential for range shifts and contractions under future warming, I generated a …

Natural Selection On Feralization Genes Contributed To The Invasive Spread Of Wild Pigs Throughout The United States, Niek W. G. Barmentlo, Patrick G. Meirmans, William H. Stiver, Joseph G. Yarkovich, Blake E. Mccann, Antoinette J. Piaggio, Dominic Wright, Timothy J. Smyser, Mirte Bosse

United States Department of Agriculture Wildlife Services: Staff Publications

Despite a long presence in the contiguous United States (US), the distribution of invasive wild pigs (Sus scrofa × domesticus) has expanded rapidly since the 1980s, suggesting a more recent evolutionary shift towards greater invasiveness. Contemporary populations of wild pigs represent exoferal hybrid descendants of domestic pigs and European wild boar, with such hybridization expected to enrich genetic diversity and increase the adaptive potential of populations. Our objective was to characterize how genetic enrichment through hybridization increases the invasiveness of populations by identifying signals of selection and the ancestral origins of selected loci. Our study focused on invasive …

Influence Of Habitat And Baiting Strategy On Oral Rabies Vaccine Bait Uptake By Raccoons In The Southeastern United States, Jacob E. Hill, Madison L. Miller, Richard B. Chipman, Amy T. Gilbert, James C. Beasley, Guha Dharmarajan, Olin E. Rhodea

United States Department of Agriculture Wildlife Services: Staff Publications

terrestrial wildlife species. However, there is currently a limited understanding of how different baiting strategies influence raccoon (Procyon lotor) uptake of ORV baits in non-agricultural habitats in the Southeastern United States, which may hinder the refinement of ORV management for raccoons in this region. Using a combination of new and existing data, we investigated the role of baited area (0.16 vs 3 km²), bait density (75 versus 150 baits/km²) and season (spring versus fall) on placebo ORV bait uptake by raccoons in four rural, non-agricultural habitats in the southeastern United States (bottomland hardwood forest, …

Prevalence Of Avian Influenza Virus In Atypical Wild Birds Host Groups During An Outbreak Of Highly Pathogenic Strain Ea/Am H5n1, Jourdan M. Ringenberg, Kelsey Weir, Lee Humberg, Carl Voglewede, Mitch Oswald, J. Jeffrey Root, Krista Dilione, Even Casey, Michael Milleson, Timothy Linder, Juliann Lenoch

United States Department of Agriculture Wildlife Services: Staff Publications

The global outbreak of highly pathogenic avian influenza (HPAI) H5N1 Eurasian lineage goose/Guangdong clade 2.3.4.4b virus that was detected in North America in 2021 is the largest in history and has significantly impacted wild bird populations and domestic poultry across the continent. Synanthropic birds may play an important role in transmitting the virus laterally to other wild bird species and domestic poultry. Understanding the dynamics of HPAI in atypical, or nonreservoir, wild bird hosts may help inform management decisions and potential risk factors to both wild and domestic bird populations. Following the confirmation of infections of HPAI H5N1 in domestic …

Evaluation Of Mitigation Translocation As A Management Tool To Reduce Conflicts Between Humans And American Kestrels, Brian E. Washburn

United States Department of Agriculture Wildlife Services: Staff Publications

Raptor‐aircraft collisions (bird strikes) pose a serious safety risk to civil aircraft. Even smaller raptors, such as American kestrels (Falco sparverius), can be problematic within airport environments. Given widespread declines in kestrel populations, public interest, logistical and financial constraints, and other factors, managing kestrels at airports presents some unique challenges. I conducted a study to determine which biological (e.g., age and sex of the bird) and logistical factors (e.g., month and translocation distance) might influence the return of American kestrels live‐captured and translocated from 42 civil airports and military airbases within the contiguous USA during 2016–2021. American kestrels …

Discovery Of A Novel Invasive Rodent Species On Wake Atoll With A Desert Southwest Usa Origin, Antoinette J. Piaggio, Eric Lanners, Daniel R. Taylor, Aaron B. Shiels, Marjorie Matocq, John Eisemann

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive species, particularly omnivorous rodents, have damaged island ecosystems around the world. The unique flora and fauna of island systems have typically not evolved with omnivorous rodents and are heavily impacted by their introduction. Wake Atoll of the southern Pacific Ocean is a 707-hectare coral island complex of three islands managed by the United States Department of Defense (DoD). DoD restricts civilian access to the atoll but aircraft and seacraft regularly visit the island to transport military equipment and to sustain the year-round military and contractor personnel stationed on the atoll. Wake Atoll had been invaded by Rattus rattus complex …

Efficacy Of Gonacon Fertility Control Against Prairie Dogs And Potential For Uses On Other Rodent Species, Aaron B. Shiels, Emily W. Ruell, Jason E. Bruemmer

United States Department of Agriculture Wildlife Services: Staff Publications

Use of a contraceptive (i.e., fertility control) is attractive for rodent management where lethal control is unwanted. Although population reduction is generally unachievable with small-scale, short-term contraceptive use, reduced juvenile recruitment is achievable. The injectable immunocontraceptive vaccine GonaCon (active ingredient: gonadotropin releasing hormone [GnRH]) was registered in 2022 by the United States Environmental Protection Agency (EPA) for controlling fertility of female prairie dogs (Cynomys, a type of ground squirrel) in urban/suburban settings. Here we: 1) describe past research, including a replicated field study in Colorado (GonaCon treatment vs. control sites) testing efficacy of GonaCon in prairie dogs, which …

Agricultural And Ecological Resources Safeguarded By The Prevention Of Wild Pig Population Expansion, Colin Jareb, Kim M. Pepin, Ryan S. Miller, Stephanie A. Shwiff, Sophie C. Mckee

United States Department of Agriculture Wildlife Services: Staff Publications

Wild pigs (Sus scrofa) are one of the most destructive invasive species in the United States, known for causing extensive damage to agricultural commodities, natural resources, and property, and for transmitting diseases to livestock. Following the establishment of the National Feral Swine Damage Management Program (NFSDMP) in 2014, the expansion of wild pig populations has been successfully slowed. This paper combines two modeling approaches across eight separate models to characterize the expansion of wild pig populations in the absence of intervention by the NFSDMP and forecasts the value of a subset of resources safeguarded from the threat of …

Oral Rabies Vaccination Of Raccoons (Procyon Lotor) Across A Development Intensity Gradient In Burlington, Vermont, Usa, 2015–2017, Emily M. Beasley, Kathleen M. Nelson, Dennis Slate, Amy T. Gilbert, Frederick E. Pogmore, Richard B. Chipman, Amy J. Davis

United States Department of Agriculture Wildlife Services: Staff Publications

Management of the raccoon rabies virus variant in North America is conducted primarily using oral rabies vaccination (ORV). When a sufficient proportion of the population is vaccinated (60%), rabies transmission can be eliminated. To date, ORV programs have successfully controlled and eliminated raccoon rabies in rural areas, but there has been less success in urban areas. We studied the proportions of rabies virus neutralizing antibodies (RVNA) in a raccoon (Procyon lotor) population during a 3-year ORV trial in developed areas of Burlington, Vermont, United States. We used a modified N-mixture model to estimate raccoon abundance, RVNA seroprevalence, and …

Distribution And Prevalence Of Antibodies To Trichinella Spp. And Toxoplasma Gondii In Wild Pigs (Sus Scrofa) In The United States, Christopher A. Cleveland, Ellen Haynes, Katherine C. Callaghan, Alinde Fojtik, Sarah Coker, Emily Doub, Vienna R. Brown, Ania A. Majewska, Michael J. Yabsley

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive wild pigs (Sus scrofa) are a reservoir for over 100 viral, bacterial, and parasitic pathogens that are transmissible to humans, livestock, domestic animals, and wildlife in North America. Numerous historical local surveys and results from a nation-wide survey (2006–2010) indicated that wild pigs in the United States act as reservoirs for Trichinella spp. and Toxoplasma gondii, two zoonotic pathogens of importance for human and animal health. Since that time, wild pig populations have expanded and increased in density in many areas. Population expansion of wild pigs creates opportunities for the introduction of pathogens to new areas …

Ethyl-Iophenoxic Acid As A Serum Marker For Oral Baiting Of Tasmanian Devils, Ruth Pye, David Nichols, Sally A. Nofs, Amy T. Gilbert, Andrew S. Flies

United States Department of Agriculture Wildlife Services: Staff Publications

Oral baits containing vaccines, medicants or toxicants have been delivered to a broad range of wildlife species to protect against or treat disease, or suppress populations. Ethyl-Iophenoxic acid (Et-IPA) is used as a biomarker to determine oral bait consumption by wildlife species to assess and refine baiting strategies. Et-IPA is a persistent biomarker in many eutherian mammal species but not in the two marsupial species, swamp wallaby (Wallabia bicolor) and brushtail possum (Trichosurus vulpecula), tested to date. Et-IPA has not previously been evaluated in carnivorous marsupials. The Tasmanian devil (Sarcophilus harrisii), the largest extant …

Estimating Landscape Spread Of A Low-Prevalence Disease Using Multiple Surveillance Methods, Abigail Feuka, Aakash Pandey, Melinda Cosgrove, Megan Moriarty, Anthony Duffiney, Henry Campa Iii, Kurt C. Vercuteren, Kimberly M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

1. Diseases occurring at low prevalence in free-ranging wildlife can be difficult to study and predict at a landscape scale. This problem is compounded by imperfect pathogen detection.

2. We used data from multiple surveillance methods to determine factors influencing spread of a low-prevalence disease, bovine tuberculosis (bTB), among white-tailed deer (Odocoileus virginianus) in a bTB endemic area over a 10-year period. We fit dynamic occupancy models to predict spatial spread of bTB through a county in Michigan, USA, within the bTB endemic area, while accounting for imperfect detection and a suite of ecological processes potentially driving bTB …

Effects Of The Immunocontraceptive Gonacon On Pregnancy In Brucella-Seropositive American Bison (Bison Bison), Rebecca K. Frey, Morgan E. Wehtje, Pauline Nol, Patrick R. Clarke, Jack C. Rhyan, Matthew P. Mccollum, Lowell A. Miller, Douglas C. Eckery

United States Department of Agriculture Wildlife Services: Staff Publications

The purpose of this study was to determine if the number of pregnancies in naturally infected Brucella abortus-positive bison (Bison bison) cows would be reduced over a period of 5 yr after one treatment with 3000 mg gonadotropin-releasing hormone immunocontraceptive (GonaCon) compared to a similar group of naturally infected B. abortus-positive bison cows not treated with GonaCon. In each of the 5 yr, GonaCon-treated cows produced fewer offspring in relation to number of cows than the nontreated cows. Fisher’s Exact test comparing offspring produced during the first reproductive season showed a significant difference between the …

Efficacy Of X-Ray Phytosanitary Irradiation On The Infectivity And Reproduction Of Angiostrongylus Cantonensis In Experimentally Infected Rats, Susan I. Jarvi, Lisa M. Kaluna, Steven C. Hess, Lindsey Hamilton, Carmen Antaky, Robert T. Sugihara, Israel L. Leinbach, Yaeko Tagami, Argon Steel, Kathleen Howe, Steven Jacquier, Forrest Cookman, Jocelyn Diaz, John Jacob, Peter Follett

United States Department of Agriculture Wildlife Services: Staff Publications

Angiostrongylus cantonensis is a globally distributed nematode and the leading cause of eosinophilic meningitis in humans. As a global hotspot for this disease, Hawaii’s agricultural exports may be contributing to the spread of A. cantonensis. Phytosanitary irradiation doses of 150 or 400 Gy provide quarantine security against multiple insect pests. We evaluated the in vitro and in vivo effects of phytosanitary irradiation on infectious, third-stage A. cantonensis juveniles. In vitro experiments directly exposed juveniles to irradiation doses ranging from 200 to 1,000 Gy. Results showed low mortality and no dose response across all treatments 27 days post-irradiation. …

The Influence Of Genes On The Migratory Timing Of Great Reed Warblers, Emily Fackler

Honors Undergraduate Theses

Many organisms migrate; however, there is a lack of knowledge on the mechanisms that drive migration timing, including which genes play a role. The great reed warbler (Acrocephalus arundinaceus), a migratory bird that breeds in Eurasia and overwinters in sub-Saharan Africa, is an excellent model to study the genetics of migration. Each season, some individuals migrate early, whereas others migrate later in the season. In other words, they exhibit differences in their migratory chronotypes. Past research has identified three candidate genes (TOP1, PEAK1, and CPNE4) that influence the migratory chronotypes of another avian species, …

Investigating The Relationships Between Biotic And Abiotic Factors Affecting Migratory Behavior In Westslope Cutthroat Trout Within The Priest River System, Kyle M. Keenan

EWU Masters Thesis Collection

Numerous salmonid species demonstrate diverse life histories, encompassing both resident and migratory behaviors. Migratory life histories play a pivotal role in maintaining metapopulations for various reasons, facilitating genetic exchange between populations and yielding larger-sized females with increased fecundity relative to residents. This study took place in northern Idaho, within the lower Priest River system, which is highly susceptible to degrading habitat. Previous research has discovered this system as a significant contributor to migratory Westslope Cutthroat Trout (Oncorhynchus lewisi, WCT) in the Lake Pend Oreille and Priest River systems. Expanding on these results, we compared four Priest River tributaries that produced …

The Genetic Basis Of Two Reproductive Traits In Monkeyflowers: Stigma Closure And Corolla Carotenoids, Rachel Anne Halperin

Undergraduate Theses, Professional Papers, and Capstone Artifacts

Abstract

The interactions between pollinators and flowers have long been a driving force for the evolution of many physical floral traits. Traits such as flower shape, size, color, and smell are just some of these traits that evolve because of these interactions. This evolution does not only occur in the more obvious morphological floral traits, however, but also in more subtle traits like touch sensitive stigma closure. In hundreds of Lamiales species, the bilobed stigma, the organ that receives pollen from pollinators, closes rapidly upon touch. Theory and experiments show that this novel dynamic reproductive trait increases pollen export and …

Interdisciplinary Learning: How Different Ways Of Thinking Can Fuel Passion And Expand Understanding., Allison Amy Peschek

Undergraduate Theses, Professional Papers, and Capstone Artifacts

This Capstone project was created to show the profound experience resulting from an extended range of interdisciplinary learning, and how different methods, when paired together, can enhance a learning experience. This was a personal project of exploration into those different angles, and primarily focused on avenues of logical and creating learning, respectively. These methods have been implemented by this author often in the past, but this capstone will explore this concept further, as there is a lot of potential in combining these different methods and biases in learning, to both further passion and understanding as a learner, but to also …

Restoration Is Repairing Relationships: Bridging Indigenous And Western Sciences To Assess The Socio-Ecological Restoration Of Wild Rice (Zizania Palustris) On Keweenaw Bay Indian Community Homelands, Cassandra M. Reed-Vandam

Dissertations, Master's Theses and Master's Reports

Manoomin (wild rice, Zizania palustris) is an ecologically and culturally significant plant relative for the Keweenaw Bay Indian Community (KBIC). Historically, manoomin was present across much of the Great Lakes, however, their presence has declined since the early 1900s and, by 1990, virtually disappeared within KBIC homelands. Employing ethnography, surveys, focus groups, and conversations with Ojibwa knowledge holders, this research defined successful manoomin restoration for KBIC and developed socio-ecological attributes and indicators to assess restoration presented in the Medicine Wheel Framework for Manoomin Restoration. Surface water, sediment, and pore water samples at six different manoomin sites were analyzed to …

Monitoring Faunal Responses To Biodegradable Oyster Reef Restoration Materials With Camera Traps, Tara L. Blanchard

Honors Undergraduate Theses

Restoration of the oyster reefs has become increasingly crucial due to great population declines around the globe. Intertidal oyster reefs provide essential foraging and loafing grounds to many faunal species, including several threatened/endangered wading bird species. Biodegradable oyster reef restoration materials have been introduced to avoid potential plastic pollution from traditional materials. Studies have shown success regarding oyster recruitment rates to these materials. However, their impacts on fauna using restored oyster reefs are unknown. This project aims to evaluate oyster reef restoration using biodegradable materials to increase faunal diversity, abundance, and foraging behaviors. Camera traps were deployed to observe fauna …

Examining Wrack In Mosquito Lagoon To Analyze Biodiversity And Seagrass Viability, Nicole Jerrell

Honors Undergraduate Theses

Seagrass restoration of Halodule wrightii, has become crucial as seagrass coverage in the Indian River Lagoon (IRL) declined by 58% between 2011 and 2019. To understand the abundance of seagrass fragments available for natural recruitment and restoration, we tracked the abundance of viable fragments found in the wrack in Mosquito Lagoon. Wrack is plant material, including seagrass fragments, mangrove propagules, and detritus. Seagrass fragments were considered viable if the fragment had an apical meristem present. Replicate samples were collected from 5 locations every two weeks, starting in September 2022 and ending in September 2023, and the samples were processed …

Animating Animal Tracking Data In A Geospatial Context, Bruno V. Pinheiro

Honors Undergraduate Theses

In the field of ecology, animal tracking is core to understanding an animal’s behavior, space-use requirements, and suitable habitat. Utilizing the software created by this project, it is possible to visualize tracking data in its spatial and temporal context. The source code is written in R and leverages the Continuous-Time Movement Modeling (CTMM) package for statistical analysis. Utilizing CTMM, predicted or simulated movement paths can be generated with the user only needing to input their data. The Keyhole Markup Language (KML) is used to write a file containing all the animation parameters the user desires, such as the number of …

Movement Behavior And Metapopulation Connectivity Of Stream Salamanders In Response To Disturbance Events, Kathryn M. Greene

Theses and Dissertations--Biology

Metapopulations are shaped by the dispersal between populations in a landscape. Disturbance events can disrupt this connectivity resulting in local population extinction. For my dissertation, I used a combination of empirical and theoretical techniques to examine dispersal in response to disturbance and assessed it’s population-level consequences. My research used capture-mark-recapture sampling techniques to evaluate stream salamander movement in response to (1) a supraseasonal drought and (2) mountaintop-removal-mining (MTR) and valley-filling (VF) and (3) agent-based simulation modeling to evaluate population extinction risk in response to varying dispersal and mortality rates.

First, I evaluated the effects of a supraseasonal drought, a severe …