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Geobiology: Evidence For Early Life On Earth And The Search For Life On Other Planets, Sherry L. Cady, Nora Noffke

OES Faculty Publications

Extensive research efforts in the subdisciplinary field of geobiology have focused on the interactions between Earth and life through time. As a consequence, gaps in our knowledge of Earth’s history are closing, and the search for life beyond Earth is expanding. A few examples of geobiology studies designed to advance our understanding of life on early Earth and to improve the chances of finding life on other planets are provided to highlight recent developments and research areas that are on the verge of new discoveries.

Early Neoproterozoic Origin Of The Metazoan Clade Recorded In Carbonate Rock Texture: Reply, Fritz Neuweiler, Elizabeth C. Turner, David J. Burdige

OES Faculty Publications

We (Neuweiler et al., 2009) used scanning electron microscopic, fluorescence spectroscopic, fluorescence microscopic, and thin-section analytical work from modern, Cretaceous, Silurian, and early Neoproterozoic reefal material to make a geological case for an early Neoproterozoic origin of animals. In a modern analogue for ancient petrographic textures, degradative calcification of the extracellular collagenous matrix (ECM) of a modern siliceous sponge can be directly observed (Neuweiler et al., 2007).

A Robust, Multisite Holocene History Of Drift Ice Off Northern Iceland: Implications For North Atlantic Climate, John T. Andrews, Dennis A. Darby, Dennis Eberle, Anne E. Jennings, Matthias Moros, Astrid Ogilvie

OES Faculty Publications

An important indicator of Holocene climate change is provided by evidence for variations in the extent of drift ice. A proxy for drift ice in Iceland waters is provided by the presence of quartz. Quantitative xray diffraction analysis of the < 2 mm sediment fraction was undertaken on 16 cores from around Iceland. The quartz weight (wt.)% estimates from each core were integrated into 250-yr intervals between −0.05 and 11.7 cal. ka BP. Median quartz wt.% varied between 0.2 and 3.4 and maximum values ranged between 2.8 and 11.8 wt.%. High values were attained in the early Holocene and minimum values were reached 6–7 cal. ka BP. Quartz wt.% then rose steadily during the late Holocene. Our data exhibit no correlation with counts on haematite-stained quartz (HSQ) grains from VM129-191 west of Ireland casting doubt on the ice-transport origin. A pilot study on the provenance of Fe oxide grains in two cores that cover the last 1.3 and 6.1 cal. ka BP indicated a large fraction of the grains between 1 and 6 cal. ka BP were from either Icelandic or presently unsampled sources. However, there was a dramatic increase in Canadian and Russian sources from the Arctic Ocean ~1 cal. ka BP. These data may indicate the beginning of an Arctic Oscillation-like climate mode.

Synergistic Effects Of Iron And Temperature On Antarctic Phytoplankton And Microzooplankton Assemblages, J. M. Rose, Y. Feng, G. R. Ditullio, R. B. Dunbar, C. E. Hare, P. A. Lee, M. Lohan, M. Long, W. O. Smith Jr., B. Sohst, S. Tozzi, Y. Zhang, D. A. Hutchins

OES Faculty Publications

Iron availability and temperature are important limiting factors for the biota in many areas of the world ocean, and both have been predicted to change in future climate scenarios. However, the impacts of combined changes in these two key factors on microbial trophic dynamics and nutrient cycling are unknown. We examined the relative effects of iron addition (+1 nM) and increased temperature (+4° C) on plankton assemblages of the Ross Sea, Antarctica, a region characterized by annual algal blooms and an active microbial community. Increased iron and temperature individually had consistently significant but relatively minor positive effects on total phytoplankton …

On The Interpretation Of Caribbean Paleo-Temperature Reconstructions During The Younger Dryas, Xiuquan Wan, Ping Chang, R. Saravanan, Rong Zhang, Matthew W. Schmidt

OES Faculty Publications

A conundrum exists regarding whether the sea-surface temperatures decreased or increased over the southern Caribbean and the western Tropical Atlantic region during the Younger Dryas when the North Atlantic cooled substantially and the Atlantic thermohaline circulation was weakened significantly. Despite the proximity of core locations, some proxy reconstructions record a surface cooling, while others indicate a warming. We suggest that this seemingly paradoxical finding may, at least partially, be attributed to the competing physical processes that result in opposing signs of temperature change in the region in response to weakened North Atlantic meridional overturning circulation. Our coupled ocean-atmosphere model experiments …

Export Of Terrestrial Dissolved Organic Matter Along A River To Ocean Transect Of The Lower Chesapeake Bay Investigated By Advanced Analytical Techniques, Rachel Leigh Sleighter

Chemistry & Biochemistry Theses & Dissertations

Ultrahigh resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS) has proved essential for the complete separation of the thousands of peaks present in natural organic matter (NOM), a complex assemblage of organic molecules present in water, soils, and sediments. An improved understanding of its composition is crucial to understand how pollutants interact with NOM and how NOM cycles through global carbon cycles.

Optimizing the acquisition and handling of the FTICR mass spectra is the first step to obtaining high quality data. A simple method to internally calibrate the peaks in the complex spectra, using naturally present fatty …

Miocene Herpetofaunas From The Central Gulf Coast Usa: Their Paleoecology, Biogeography, And Biostratigraphy, Michael John Williams

LSU Doctoral Dissertations

The late Barstovian Fort Polk herpetofauna represents the most diverse herpetofauna on the Gulf Coast, USA, and includes 15 genera from ten families. The herpetofaunal composition of Fort Polk and Miocene east Texas localities is similar enough to Great Plains localities that they are all considered to be one biogeographical province during the Barstovian. The use of ternary diagrams, ratios of herpetological elements to kg matrix screened, and natricine-colubrine indices, has allowed determining the wetness of the Fort Polk sites. Development of a composite stratigraphic section for North American fossil snakes has allowed recognition of two extinctions of fossil snakes …

A Multi-Proxy Approach To Investigating The Latest Holocene (~4,500 Yrs. Bp) Vegetational History Of Catahoula Lake, Louisiana, Rebecca Ann Tedford

LSU Doctoral Dissertations

A multi-proxy investigation of sediments examined from Catahoula Lake, Louisiana has provided a record of late-Holocene vegetational changes, related to both hydrology and climate. This study integrates data from phytoliths, pollen, stable isotopes, magnetic susceptibility, and core sediment analysis. A modern phytolith analog assessed the phytoliths production in local plants and their modern soil sample distribution within the established lake vegetation zones. Fifty of the 76 species produced both distinctive and redundant phytoliths. The modern soil sample database indicates that phytoliths produced from both monocotyledon and dicotlyledon plant groups prove useful in distinguishing between forest and grassland communities and identifying …

Spatial, Geologic, And Land Use Characteristics Of Sinkholes In A Karst Landscape: Waverly, Iowa, Adam Richard Campbell

Honors Program Theses

The city of Waverly and its surrounding area in the Waverly Quadrangle has the fortune of having a large supply of groundwater that is easily accessible. However, the karst landscape that comprises much of the quadrangle has made the groundwater supply vulnerable to degradation from point and non-point contamination. Thus, it is crucial to explore the properties of sinkholes in the region to determine their threat to groundwater. To determine this threat, it is necessary to examine the characteristics of where and under what circumstances sinkholes develop. The Waverly Quadrangle is located entirely within the Iowan Surface. The bedrock in …

Impacts Of Alterations Of Organic Inputs On The Bacterial Community Within The Sediments Of Wind Cave, South Dakota, Usa, Marisa K. Chelius, Guy Beresford, Howard Horton, Meghan Quirk, Greg Selby, Rodney T. Simpson, Rodney Horrocks, John C. Moore

International Journal of Speleology

Wind Cave (WICA) in the Black Hills of South Dakota, like many mostly dry caves in temperate regions is an energy-starved system. The biotic communities that reside in these systems are low in diversity and simple in structure, and sensitive to changes in external inputs of organic matter. Caves open to tourist traffic offer an opportunity to study the impacts of organic matter amendments in the form of human and rodent hair and dander, clothing lint, material from rodent activity (nesting materials and feces), and algal growth in and around artificial lighting. This study reports on the impacts of carbon …

Productivity-Diversity Relationships From Chemolithoautotrophically Based Sulfidic Karst Systems, Megan L. Porter, Annette Summers Engel, Thomas C. Kane, Brian K. Kinkle

International Journal of Speleology

Although ecosystems thriving in the absence of photosynthetic processes are no longer considered unique phenomena, we have yet to understand how these ecosystems are energetically sustained via chemosynthesis. Ecosystem energetics were measured in microbial mats from active sulfidic caves (Movile Cave, Romania; Frasassi Caves, Italy; Lower Kane Cave, Wyoming, USA; and Cesspool Cave, Virginia, USA) using radiotracer techniques. We also estimated bacterial diversity using 16S rRNA sequences to relate the productivity measurements to the composition of the microbial communities. All of the microbial communities investigated were dominated by chemolithoautotrophic productivity, with the highest rates from Movile Cave at 281 g …

Lights And Shadows On The Conservation Of A Rock Art Cave: The Case Of Lascaux Cave, Fabiola Bastian, Claude Alabouvette

International Journal of Speleology

Lascaux Cave was discovered in 1940. Twenty years after the first microbial contamination signs appeared. In the last forty years the cave suffered different fungal invasions. Here we discuss the past, present and future of the cave and the conservation of its rock art paintings to the light of data obtained using culture-dependent and –independent methods.

Sediment Flushing In Mystic Cave, West Virginia, Usa, In Response To The 1985 Potomac Valley Flood, James J. Van Gundy, William B. White

International Journal of Speleology

The great November 5, 1985 Potomac Valley flood was responsible for the release of 1800 m³ of alluvial and colluvial sediment from the walls of the entrance doline of Mystic Cave. Flood waters were sufficiently powerful to flush the entire mass of sediment not only into the cave but through the cave. Remnants of the sediment mass in the form of sand bars and a few cobbles wedged in speleothems were the only evidence in the cave that the huge mass of sediment had moved through. The sediment moved as a suspended mass in water moving at peak velocities …

Cottonballs, A Unique Subaqeous Moonmilk, And Abundant Subaerial Moonmilk In Cataract Cave, Tongass National Forest, Alaska, Megan D. Curry, Penelope J. Boston, Mike N. Spilde, James F. Baichtal, Andrew R. Campbell

International Journal of Speleology

The Tongass National Forest is known for its world-class karst features and contains the largest concentration of dissolutional caves in Alaska. Within these karst systems exist unusual and possibly unique formations exhibiting possible biological origin or influence. Cataract Cave is an example of such a system. This cave hosts a unique depositional setting in which so-called “cottonballs” line two permanent pools. The cottonballs are a calcitic deposit heavily entwined within a mass of microbial filaments. They are juxtaposed with extensive subaerial calcitic moonmilk wall deposit of a more conventional nature but of an extraordinary thickness and abundance. Both the cottonballs …

Microscopic Fungi Isolated From The Domica Cave System (Slovak Karst National Park, Slovakia). A Review, Alena Nováková

International Journal of Speleology

A broad spectrum, total of 195 microfungal taxa, were isolated from various cave substrates (cave air, cave sediments, bat droppings and/or guano, earthworm casts, isopods and diplopods faeces, mammalian dung, cadavers, vermiculations, insect bodies, plant material, etc.) from the cave system of the Domica Cave (Slovak Karst National Park, Slovakia) using dilution, direct and gravity settling culture plate methods and several isolation media. Penicillium glandicola, Trichoderma polysporum, Oidiodendron cerealis, Mucor spp., Talaromyces flavus and species of the genus Doratomyces were isolated frequently during our study. Estimated microfungal species diversity was compared with literature records from the same …

Microbial Communities And Associated Mineral Fabrics In Altamira Cave, Spain, Soledad Cuezva, Sergio Sanchez-Moral, Cesareo Saiz-Jimenez, Juan Carlos Cañaveras

International Journal of Speleology

Evidences of microbial colonizations were observed in Altamira Cave, Spain. These consisted of distinct small coloured colonies, both on walls and ceiling, mainly located in the area near the cave entrance, which progressed until reaching the Polychromes Hall. The colonizations were characterized by a high morphological and microstructural variability and related to biomineralization processes. Two main types of CaCO₃ deposits were related to the colonies: rosette- or nest-like aggregates of rhombohedral calcite crystals, and spheroid to hemispheroid CaCO₃ elements. Colonies distribution seems to be controlled by microenvironmental conditions inside the cavity. The areas of the cave showing higher …

The Association Between Bubble Trails And Folia: A Morphological And Sedimentary Indicator Of Hypogenic Speleogenesis By Degassing, Example From Adaouste Cave (Provence, France), Philippe Audra, Ludovic Mocochain, Jean-Yves Bigot, Jean-Claude Nobécourt

International Journal of Speleology

Bubble trails are subaqueous features in carbonate caves, which are made by the corrosion of ascending carbon dioxide bubbles. Folia are calcite deposits resembling inverted rimstone dams in saturated pools. Based on morphological studies in Adaouste Cave (Provence, France) and on studies elsewhere in the world, we propose a new genetic model for folia, close to the model of Green (1991). The association of bubble trails and folia, occurring on overhanging walls, is interpreted to be an indicator of hypogenic degassing occurring just below the water table. The association is the result of juxtaposed processes composed of corrosion along bubble …

Cryogenic Cave Carbonates From The Cold Wind Cave, Nízke Tatry Mountains, Slovakia: Extending The Age Range Of Cryogenic Cave Carbonate Formation To The Saalian, Karel Žák, Helena Hercman, Monika Orvošová, Ivana Jačková

International Journal of Speleology

Cold Wind Cave, located at elevations ranging between 1,600 and 1,700 m a. s. l. in the main range of the Nízke Tatry Mountains (Slovakia), is linked in origin with the adjacent Dead Bats Cave. Together, these caves form a major cave system located within a narrow tectonic slice of Triassic sediments. Both caves have undergone complex multiphase development. A system of sub-horizontal cave levels characterized by large, tunnel-like corridors was formed during the Tertiary, when elevation differences surrounding the cave were less pronounced than today. The central part of the Nízke Tatry Mountains, together with the cave systems, was …

Observations On The Cave-Associated Beetles (Coleoptera) Of Nova Scotia, Canada, Max Moseley

International Journal of Speleology

The cave-associated invertebrates of Nova Scotia constitute a fauna at a very early stage of post-glacial recolonization. The Coleoptera are characterized by low species diversity. A staphylinid Quedius spelaeus spelaeus, a predator, is the only regularly encountered beetle. Ten other terrestrial species registered from cave environments in the province are collected infrequently. They include three other rove-beetles: Brathinus nitidus, Gennadota canadensis and Atheta annexa. The latter two together with Catops gratiosus (Leiodidae) constitute a small group of cave-associated beetles found in decompositional situations. Quedius s. spelaeus and a small suite of other guanophiles live in accumulations of …

Effects Of Plant Uptake And Micro-Topography On Chloride Transport In Arid Soils, Wenming Nie

UNLV Theses, Dissertations, Professional Papers, and Capstones

Chloride concentration profiles to depths of 1 m were evaluated on a young alluvial fan in Eldorado Valley, NV. It was found that chloride beneath plant canopies were 11 to 222 times higher than adjacent (1 - 2 m away) bare soil locations. Two-dimensional numerical simulations using HYDRUS 2D/3D model were used to further explore the impact of plants on chloride transport. The simulation results indicated that lateral flow driven by root uptake concentrated chloride toward root zones, leading to the accumulation of chloride under plant canopies. Results also suggest that locally micro-topography can have a substantial impact on chloride …

Relating Groundwater To Seasonal Wetlands In Southeastern Wisconsin, Usa, John D. Skalbeck, Donald M. Reed, Randall J. Hunt, Jamie D. Lambert

United States Geological Survey: Staff Publications

Historically, drier types of wetlands have been difficult to characterize and are not well researched. Nonetheless, they are considered to reflect the precipitation history with little, if any, regard for possible relation to groundwater. Two seasonal coastal wetland types (wet prairie, sedge meadow) were investigated during three growing seasons at three sites in the Lake Michigan Basin, Wisconsin, USA. The six seasonal wetlands were characterized using standard soil and vegetation techniques and groundwater measurements from the shallow and deep systems. They all met wetland hydrology criteria (e.g., water within 30 cm of land surface for 5% of the growing season) …

Implications For The Dynamic Health Of A Glacier From Comparison Of Conventional And Reference-Surface Balances, W. D. Harrison, L. H. Cox, R. Hock, R. S. March, E. C. Pettit

United States Geological Survey: Staff Publications

Conventional and reference-surface mass-balance data from Gulkana and Wolverine Glaciers, Alaska, USA, are used to address the questions of how rapidly these glaciers are adjusting (or ‘responding’) to climate, whether their responses are stable, and whether the glaciers are likely to survive in today’s climate. Instability means that a glacier will eventually vanish, or at least become greatly reduced in volume, if the climate stabilizes at its present state. A simple non-linear theory of response is presented for the analysis. The response of Gulkana Glacier is characterized by a timescale of several decades, but its stability and therefore its survival …

A Lacustrine Carbonate Record Of Holocene Seasonality And Climate, Chad A. Wittkop, Jane L. Teranes, Walter E. Dean, Thomas P. Guilderson

United States Geological Survey: Staff Publications

Annually laminated (varved) Holocene sediments from Derby Lake, Michigan, display variations in endogenic calcite abundance refl ecting a long-term (millennial-scale) decrease in burial punctuated with frequent short-term (decadal-scale) oscillations due to carbonate dissolution. Since 6000 cal yr B.P., sediment carbonate abundance has followed a decreasing trend while organic-carbon abundance has increased. The correlation between organic-carbon abundance and the sum of March-April-October-November insolation has an r² value of 0.58. We interpret these trends to represent a precession-driven lengthening of the Holocene growing season that has reduced calcite burial by enhancing net annual organic-matter production and associated calcite dissolution. Correlations with …

Prevalence Of West Nile Virus In Migratory Birds During Spring And Fall Migration, Robert J. Dusek, Robert G. Mclean, Laura D. Kramer, Sonya R. Ubico, Alan P. Dupuis Ii, Gregory D. Ebel, Stephen C. Guptill

United States Geological Survey: Staff Publications

To investigate the role of migratory birds in the dissemination of West Nile virus (WNV), we measured the prevalence of infectious WNV and specific WNV neutralizing antibodies in birds, principally Passeriformes, during spring and fall migrations in the Atlantic and Mississippi flyways from 2001–2003. Blood samples were obtained from 13,403 birds, representing 133 species. Specific WNV neutralizing antibody was detected in 254 resident and migratory birds, representing 39 species, and was most commonly detected in northern cardinals (Cardinalis cardinalis ) (9.8%, N = 762) and gray catbirds ( Dumetella carolinensis ) (3.2%, N = 3188). West Nile virus viremias …

Paleoceanography Of The Gulf Of Alaska During The Past 15,000 Years: Results From Diatoms, Silicoflagellates, And Geochemistry, John A. Barron, David Bukry, Walter E. Dean, Jason A. Addison, Bruce Finney

United States Geological Survey: Staff Publications

High-resolution records of diatoms, silicoflagellates, and geochemistry covering the past 15,000 years were studied in three cores from the Gulf of Alaska (GOA). Core EW0408-85JC in an oceanic setting on the Kayak Slope displays a paleoceanographic record similar to that at several locations on the California margin during deglaciation. Biologic productivity as reconstructed using geochemical and microfossil proxies increased abruptly during the Bølling–Alleröd (Bø–Al) warm interval (14.7–12.9 cal ka), declined during the Younger Dryas (YD) cold interval (12.9 to 11.7 cal kyr BP), and rose again during the earliest Holocene. At this site, the record after ~11 cal kyr BP …

Possible Sources Of Archaeological Maize Found In Chaco Canyon And Aztec Ruin, New Mexico, Larry Benson, J. R. Stein, H. E. Taylor

United States Geological Survey: Staff Publications

Maize played a major role in Chaco’s interaction with outlying communities in the southern Colorado Plateau. This paper seeks to determine where archaeological corn cobs brought to Chaco Canyon were grown. Strontium-isotope and trace-metal ratios of 180 soil-water and 18 surface-water sites in the Southern Colorado Plateau have revealed possible source areas for some of 37 archaeological corn cobs from Chaco Canyon and 10 archaeological corn cobs from Aztec Ruin, New Mexico. The most probable source areas for cobs that predate the middle-12th-century drought include several Upper Rio Chaco sites (not including Chaco Canyon). There are many potential source areas …

A Robust, Multisite Holocene History Of Drift Ice Off Northern Iceland: Implications For North Atlantic Climate, John T. Andrews, Dennis Darby, Dennis Eberle, Anne E. Jennings, Matthias Moros, Astrid Ogilvie

United States Geological Survey: Staff Publications

An important indicator of Holocene climate change is provided by evidence for variations in the extent of drift ice. A proxy for drift ice in Iceland waters is provided by the presence of quartz. Quantitative xray diffraction analysis of the < 2 mm sediment fraction was undertaken on 16 cores from around Iceland. The quartz weight (wt.)% estimates from each core were integrated into 250-yr intervals between −0.05 and 11.7 cal. ka BP. Median quartz wt.% varied between 0.2 and 3.4 and maximum values ranged between 2.8 and 11.8 wt.%. High values were attained in the early Holocene and minimum values were reached 6–7 cal. ka BP. Quartz wt.% then rose steadily during the late Holocene. Our data exhibit no correlation with counts on haematite-stained quartz (HSQ) grains from VM129-191 west of Ireland casting doubt on the ice-transport origin. A pilot study on the provenance of Fe oxide grains in two cores that cover the last 1.3 and 6.1 cal. ka BP indicated a large fraction of the grains between 1 and 6 cal. ka BP were from either Icelandic or presently unsampled sources. However, there was a dramatic increase in Canadian and Russian sources from the Arctic Ocean ~1 cal. ka BP. These data may indicate the beginning of an Arctic Oscillation-like climate mode.

History Of Wildlife Toxicology, Barnett A. Rattner

United States Geological Survey: Staff Publications

The field of wildlife toxicology can be traced to

the late nineteenth and early twentieth centuries. Initial

reports included unintentional poisoning of birds from

ingestion of spent lead shot and predator control agents,

alkali poisoning of waterbirds, and die-offs from maritime

oil spills. With the advent of synthetic pesticides in the

1930s and 1940s, effects of DDT and other pesticides were

investigated in free-ranging and captive wildlife. In

response to research findings in the US and UK, and the

publication of Silent Spring in 1962, public debate on the

hazards of pollutants arose and national contaminant

monitoring programs were initiated. …

Mineralogy Of Mine Waste At The Vermont Asbestos Group Mine, Belvidere Mountain, Vermont, Denise M. Levitan, Jane M. Hammarstrom, Mickey E. Gunter, Robert R. Seal Ii, I-Ming Chou, Nadine M. Piatak

United States Geological Survey: Staff Publications

Samples from the surfaces of waste piles at the Vermont Asbestos Group mine in northern Vermont were studied to determine their mineralogy, particularly the presence and morphology of amphiboles. Analyses included powder X-ray diffraction (XRD), optical microscopy, scanning electron microscopy (SEM), electron probe microanalysis (EPMA), and Raman spectroscopy. Minerals identified by XRD were serpentine-group minerals, magnetite, chlorite, quartz, olivine, pyroxene, and brucite; locally, mica and carbonates were also present. Raman spectroscopy distinguished antigorite and chrysotile, which could not be differentiated using XRD. Long-count, short-range XRD scans of the (110) amphibole peak showed trace amounts of amphibole in most samples. Examination …

Microseismicity At The North Anatolian Fault In The Sea Of Marmara Offshore Istanbul, Nw Turkey, Fatih Bulut, Marco Bohnhoff, William L. Ellsworth, Mustafa Aktar, Georg Dresen

United States Geological Survey: Staff Publications

The North Anatolian Fault Zone (NAFZ) below the Sea of Marmara forms a ‘‘seismic gap’’ where a major earthquake is expected to occur in the near future. This segment of the fault lies between the 1912 Ganos and 1999 İzmit ruptures and is the only NAFZ segment that has not ruptured since 1766. To monitor the microseismic activity at the main fault branch offshore of Istanbul below the Çınarcık Basin, a permanent seismic array (PIRES) was installed on the two outermost Prince Islands, Yassiada and Sivriada, at a few kilometers distance to the fault. In addition, a temporary network of …