Digital Commons Network^™

Demersal Fishes Associated With Lophelia Pertusa Coral And Hard-Substrate Biotopes On The Continental Slope, Northern Gulf Of Mexico, Kenneth J. Sulak, R. Allen Brooks, Kirsten E. Luke, April D. Norem, Michael Randall, Andrew J. Quaid, George E. Yeargin, Jana M. Miller, William M. Harden, John H. Caruso, Steve W. Ross

United States Geological Survey: Staff Publications

The demersal fish fauna of Lophelia pertusa (Linnaeus, 1758) coral reefs and associated hard-bottom biotopes was investigated at two depth horizons in the northern Gulf of Mexico using a manned submersible and remote sampling. The Viosca Knoll fauna consisted of at least 53 demersal fish species, 37 of which were documented by submersible video. On the 325 m horizon, dominant taxa determined from frame-by-frame video analysis included Stromateidae, Serranidae, Trachichthyidae, Congridae, Scorpaenidae, and Gadiformes. On the 500 m horizon, large mobile visual macrocarnivores of families Stromateidae and Serranidae dropped out, while a zeiform microcarnivore assumed importance on reef “Thicket” biotope, …

Exceptionally Preserved Jellyfishes From The Middle Cambrian, Paulyn Cartwright, Susan L. Halgedahl, Jonathan R. Hendricks, Richard D. Jarrard, Antonio C. Marques, Allen G. Collins, Bruce S. Lieberman

Faculty Publications

Cnidarians represent an early diverging animal group and thus insight into their origin and diversification is key to understanding metazoan evolution. Further, cnidarian jellyfish comprise an important component of modern marine planktonic ecosystems. Here we report on exceptionally preserved cnidarian jellyfish fossils from the Middle Cambrian (~505 million years old) Marjum Formation of Utah. These are the first described Cambrian jellyfish fossils to display exquisite preservation of soft part anatomy including detailed features of structures interpreted as trailing tentacles and subumbrellar and exumbrellar surfaces. If the interpretation of these preserved characters is correct, their presence is diagnostic of modern jellyfish …

Geogram 2007, David J. Keeling Editor, Wku Department Of Geography And Geology

Earth, Environmental, and Atmospheric Sciences Publications

No abstract provided.

A Simple Array Platform For Microrna Analysis And Its Application In Mouse Tissues, Xiaoqing Tang, Jozsef Gal, Xun Zhuang, Wang-Xia Wang, Haining Zhu, Guiliang Tang

Plant and Soil Sciences Faculty Publications

MicroRNAs (miRNAs) are a novel class of small noncoding RNAs that regulate gene expression at the post-transcriptional level and play a critical role in many important biological processes. Most miRNAs are conserved between humans and mice, which makes it possible to analyze their expressions with a set of selected array probes. Here, we report a simple array platform that can detect 553 nonredundant miRNAs encompassing the entire set of miRNAs for humans and mice. The platform features carefully selected and designed probes with optimized hybridization parameters. Potential cross-reaction between mature miRNAs and their precursors was investigated. The array platform was …

Organic Geochemical Investigation Of A Highly Contaminated Urban Waterway: The Gowanus Canal, Brooklyn, New York, Usa, Michael A. Kruge, Kevin K. Olsen, Eric A. Stern

Department of Earth and Environmental Studies Faculty Scholarship and Creative Works

The Gowanus Canal is an industrial waterway constructed in the mid-19^th century by widening and deepening a natural tidal channel. It is ca. 3 km in length and empties into Gowanus Bay, an arm of New York Harbor. Its banks, reinforced by bulkheads and piers, became the site of intensive industrial activity, including oil refining, coal gasification, soap making and tanning. Even though much of the industrial activity along the canal has ceased, its sediments remain highly enriched in organic and inorganic contaminants, with combined sewer outfalls continuing to transport pollutants into the canal. The canal area remains densely …

Microbial Nanowires: Is The Subsurface "Hardwired"?, Dimitrios Ntarlagiannis, Estella A. Atekwana, Eric A. Hill, Yuri A. Gorby

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

The Earth's shallow subsurface results from integrated biological, geochemical, and physical processes. Methods are sought to remotely assess these interactive processes, especially those catalysed by micro-organisms. Using saturated sand columns and the metal reducing bacterium Shewanella oneidensis MR-1, we show that electrically conductive appendages called bacterial nanowires are directly associated with electrical potentials. No significant electrical potentials were detectable in columns inoculated with mutant strains that produced non-conductive appendages. Scanning electron microscopy imaging revealed a network of nanowires linking cells-cells and cells to mineral surfaces, "hardwiring" the entire length of the column. We hypothesize that the nanowires serve as conduits …

Environmental Controls On The Landscape-Scale Biogeography Of Stream Bacterial Communities, Noah Fierer, Jennifer L. Morse, Sean T. Berthrong, Emily S. Bernhardt, Robert B. Jackson

Environmental Science and Management Faculty Publications and Presentations

We determined the biogeographical distributions of stream bacteria and the biogeochemical factors that best explained heterogeneity for 23 locations within the Hubbard Brook watershed, a 3000-ha forested watershed in New Hampshire, USA. Our goal was to assess the factor, or set of factors, responsible for generating the biogeographical patterns exhibited by microorganisms at the landscape scale. We used DNA fingerprinting to characterize bacteria inhabiting fine benthic organic matter (FBOM) because of their important influence on stream nutrient dynamics. Across the watershed, streams of similar pH had similar FBOM bacterial communities. Streamwater pH was the single variable most strongly correlated with …

Ua12/2/1 College Heights Herald, Vol. 83, No. 1, Wku Student Affairs

WKU Administration Documents

WKU campus newspaper reporting campus, athletic and Bowling Green, Kentucky news.

Comparative Analysis Of Environmental Kuznets Curve In Central And Eastern Europe And South And East Asia, Yu-Chin Pang

Graduate Student Dissertations, Theses, Capstones, and Portfolios

Environmental deterioration has frequently been viewed as a problem that inevitably accompanies economic development and industrialization. However, different economic backgrounds might experience different kinds and levels of environmental deterioration. This study investigated environmental deterioration in two groups of countries with comparable income levels but different economic backgrounds-transitional Central and Eastern Europe (CEE) and non-transitional South and East Asian (SEA) countries.

This research utilized the environmental Kuznets curve (EKC) hypothesis to explain the relationships among macroeconomic indicators, country categories, and atmospheric concentrations in the CEE and SEA regions. Three research questions and six hypotheses and related sub-hypotheses were answered and tested …

Quarternary Alluvial Deposition In The Upper Green River Valley, Kentucky, Juan Herrera

Masters Theses & Specialist Projects

This research describes the alluvial deposits and Quaternary geomorphic evolution of the Upper Green River in Kentucky by documenting the nature of flood plain sediments at two sites along the valley bottom of the Upper Green River between Mammoth Cave National Park and Green River Lake. Field methods employed included stratigraphic descriptions of bank exposures and borings obtained in flood plain surfaces, along with textural and radiocarbon analysis of sediment samples. Sediment samples from boreholes and bank exposures in two study sites (Pitman Creek confluence, -PCC- and Upper Green River Biological Preserve -UGRBP-) were collected and sieved to determine grain …

Microbial Nitrogen Limitation Increases Decomposition, Joseph M. Craine, Carl Morrow, Noah Fierer

Dartmouth Scholarship

With anthropogenic nutrient inputs to ecosystems increasing globally, there are long-standing, fundamental questions about the role of nutrients in the decomposition of organic matter. We tested the effects of exogenous nitrogen and phosphorus inputs on litter decomposition across a broad suite of litter and soil types. In one experiment, C mineralization was compared across a wide array of plants individually added to a single soil, while in the second, C mineralization from a single substrate was compared across 50 soils. Counter to basic stoichiometric decomposition theory, low N availability can increase litter decomposition as microbes use labile substrates to acquire …

Modified Fenton Oxidation Of Hydrocarbon Contaminated Soils With Cao2: Microbial Survival And Surfactant Production, Abraham Matthew Northup

Dissertations

The efficacy of CaO₂ for use in modified Fenton's (MF) reactions was investigated in this study, with the goal of developing a CaO₂-based MF oxidation technology for use in in situ chemical oxidation. Traditionally, liquid H₂O₂ (HP) is used, and is injected into the subsurface in excess to ensure a sufficient radius of influence. CaO₂ was investigated as an alternative source of H₂O₂ for MF reactions.

First, the rate of dissolution of powdered CaO₂ and the yield of HP was investigated. Our results showed that the rate of dissolution …

Sheep Updates 2007 - Part 3, Andrew Ritchie, Edward Riggall, James Hall, Gus Rose, Johan Greeff, John Young, M. Alchin, M. Young, T. Johnson, John Lucy, Martin Staines, Tim Wiley, Rob Grima, Sandra Prosser, Matt Ryan, Geoff Moore, Tony Albertsen, Phil Barrett-Lennard, George Woolston, John Titerington, Sarah Knight, Brianna Peake

Sheep Updates

This session covers seven papers from different authors:

PROFITABILITY

1. Benchmarking demonstrates both the potential and realised productivity gains in the sheep and wool industry, Andrew Ritchie, Edward Riggall and James Hall, ICON Agriculture, Darkan

2. Improving sheep genetics will increase farm profitability, Gus Rose, Johan Greeff Department of Agriculture and Food Western Australia, John Young Farming Systems Analysis Service, WA

3. Meat, Merinos and making money in WA Pastoral Zone, M. Alchin, M. Young and T. Johnson, Department of Agriculture and Food Western Australia,

GRAZING

4. Nitrogen - farmers' friend or foe? John Lucy and Martin Staines, Department …

Cost/Effectiveness Analysis Of Obtaining Operational Estimates Of Reference Evapotranspiration, Peninsular Florida, Usa, Michael G. Kittridge

USF Tampa Graduate Theses and Dissertations

The objective of this study is to conduct a cost/effectiveness analysis of the computation of reference evapotranspiration (ETo) in the peninsular of Florida. A meteorological station on the Fort Meade Mine in Polk County, Florida was used to provide data for the calculation of ETo. Five ETo equations were tested to determine the accuracy and cost/effectiveness to the fully measured ASCE Penman-Monteith (Full ASCE-PM) equation on daily, monthly, and annually time steps. The ETo equations ranged in amounts of parameters from the Full ASCE-PM to the Hargreaves. The energy terms accounted for approximately 90% of the total ETo flux. Solar …

Incorporating Results Of Avian Toxicity Tests Into A Model Of Annual Reproductive Success, Richard S. Bennett*, Matthew A. Etterson

United States Environmental Protection Agency: Publications

Modeling the effects of pesticide exposure on avian populations requires knowledge of how the pesticide changes survival and fecundity rates for the population. Although avian reproduction tests are the primary source of information on reproductive effects in the pesticide risk assessment process, current tests cannot provide a direct estimate of the effects of a pesticide on fecundity rates. We present a mathematical model that integrates information on specific types of effects from reproduction tests with information on avian life history parameters, the timing of pesticide applications, and the temporal pattern of pesticide exposure levels to estimate pesticide effects on annual …

A 2650-Year-Long Record Of Environmental Change From Northern Yellowstone National Park Based On A Comparison Of Multiple Proxy Data, Cathy Whitlock, Walter Dean, Joseph Rosenbaum, Lora Stevens, Sherilyn C. Fritz, Brandi Bracht, Mitchell Power

Department of Earth and Atmospheric Sciences: Faculty Publications

Geochemical, stable-isotope, pollen, charcoal, and diatom records were analyzed at high-resolution in cores obtained from Crevice Lake, a varved-sediment lake in northern Yellowstone National Park. The objective was to reconstruct the ecohydrologic, vegetation, and fire history of the watershed for the last 2650 years to better understand past climate variations at the forest-steppe transition. The data suggest a period of limited bottom-water anoxia, relatively wet winters, and cool springs and summers from 2650 to 2100 cal yrBP (700–150 BC). Dry warm conditions occurred between 2100 and 850–800 cal yrBP (150 BC and AD 1100–1150), when the lake was anoxic, winter …

Some Applications Of Gaussian Quadrature And Neural Network Modeling In Earth Flows And Other Slow-Moving Landslides In Cohesive Slope Materials, Rennie Bwalya Kaunda

Dissertations

Geometrical changes and progressive displacements in earth flows and other slow moving landslides triggered by climatic changes may be addressed by digital modeling. Gaussian quadrature, a numerical integration technique though fixed points, is employed to compute geometrical areas defined by stratigraphic (soil or rock layering) units, vertical pole projections and a slip surface, based on kinematic admissibility. An example from the Lake Michigan coast shows that the total internal geometrical area is found to be preserved during the course of the progressive deformation. Displacement monitoring of the slope shows that it became less stable over a period of eleven years …

Sea Surface Pco2‐Sst Relationships Across A Cold‐Core Cyclonic Eddy: Implications For Understanding Regional Variability And Air‐Sea Gas Exchange, Feizhou Chen, Wei‐Jun Cai, Claudia R. Benitez-Nelson, Yongchen Wang

Faculty Publications

[1] This study is designed to improve the understanding of how biologically productive, cold‐core cyclonic eddies affect sea surface pCO2 in the lee of the main Hawaiian Islands in the subtropical North Pacific Gyre. We identified three unique relationships between pCO2 and sea surface temperature (SST). A positive correlation between pCO2 and SST was observed in the waters surrounding the eddy suggesting surface CO2 is controlled primarily by thermodynamics. In contrast, a negative relationship was observed within the eddy core as a result of the upwelling of CO2‐enriched subsurface waters. A third relationship existed throughout the rest …

Slides: The Future Of Federal Wetlands Regulation, Mark Squillace

The Future of Federal Wetlands Regulation After Rapanos (May 10)

Presenter: Professor Mark Squillace, Director, Natural Resources Law Center, University of Colorado School of Law

35 slides

Agenda: The Future Of Federal Wetlands Regulation After Rapanos, University Of Colorado Boulder. Natural Resources Law Center

The Future of Federal Wetlands Regulation After Rapanos (May 10)

Hot-Topic Discussion held at Brownstein Hyatt Farber Schreck in Denver, Colorado on May 10, 2007 from 12:00 p.m. to 1:15 p.m.

Speaker: Mark Squillace, Director of the Natural Resources Law Center, University of Colorado School of Law.

Commentators: Wayne Forman and Michelle Kales, attorneys, Brownstein Hyatt Farber Schreck

"Rapanos v. United States, 547 U.S. 715 (2006), was a United States Supreme Court case challenging federal jurisdiction to regulate isolated wetlands under the Clean Water Act. It was the first major environmental case heard by the newly appointed Chief Justice, John Roberts and Associate Justice, Samuel Alito. The Supreme Court …

High-Resolution Stratigraphy At A Coastal Drillhole, Beth Wrege

All Theses

Lithologic descriptions of continuous core interpreted in conjunction with borehole geophysical logs were used to determine thicknesses of hydrologic and geologic units at CR-622 in the coastal plain of North Carolina. Borehole geophysics was used to adjust the position of core loss within each cored interval and to supplement lithology to determine the stratigraphy of missing segments of core. Although some geophysical logs produce non-unique lithologic solutions, a complete normal stratigraphic profile may be obtained with the addition of continuous core. Curve characteristics within geophysical logs provide precise identification of transitional sequences and can be used to calibrate lithostratigraphy. The …

Agricultural Contaminant Source And Transport In A Karst Groundwater Basin, Patricia Kambesis

Masters Theses & Specialist Projects

Agricultural land use in areas that are located in karst groundwater basins negatively impact groundwater quality because karst terrains provide multiple, direct hydrologic connections from the surface into karst aquifers. The connections and rapid velocities associated with surface and subsurface flow in karst aquifers allow for contaminants to move quickly into and through a groundwater basin. When groundwater returns to the surface via a spring or springs, any contaminants within the water become part of surface streams and rivers. These in turn, impact water quality in areas located downstream of the spring or springs. The purpose of this study was …

The Microbial Community Structure In Petroleum-Contaminated Sediments Corresponds To Geophysical Signatures, Jonathan P. Allen, Estella A. Atekwana, Eliot A. Atekwana, Joseph W. Duris, D. Dale Werkema, Silvia Rossbach

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

The interdependence between geoelectrical signatures at underground petroleum plumes and the structures of subsurface microbial communities was investigated. For sediments contaminated with light non-aqueous-phase liquids, anomalous high conductivity values have been observed. Vertical changes in the geoelectrical properties of the sediments were concomitant with significant changes in the microbial community structures as determined by the construction and evaluation of 16S rRNA gene libraries. DNA sequencing of clones from four 16S rRNA gene libraries from different depths of a contaminated field site and two libraries from an uncontaminated background site revealed spatial heterogeneity in the microbial community structures. Correspondence analysis showed …

Effects Of Quaternary Climate Change On Tributary Sedimentation And Geomorphology In Eastern Grand Canyon, Benjamin D. Dejong

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Climate variability has had a dramatic impact on eastern Grand Canyon tributaries over the past ~100 ky. This is readily observed in the Lava Chuar and Comanche catchments, which host well preserved colluvial remnants and river terraces that resulted from several climate-induced cycles of aggradation and incision. This study investigates these climate responses using surveying, sedimentology, and luminescence geochronology methods to investigate the mechanisms and timing of their deposition.

The survey data demonstrate that the concavity of terrace treads is lower than modern drainages. The sedimentology suggests the prevalence of stream-flow reworking of debris flow deposits and portrays an expected …

Ua66 2007 Student Awards Ceremony, Wku Ogden College Of Science & Engineering

WKU Administration Documents

Program recognizing Ogden College students with brief list of activities for each student.

Hikorocodium Endo Is Not An Alga But An Inozoid Sponge, J. Keith Rigby, Baba Senowbari-Daryan

Faculty Publications

The genus Hikorocodium, with the type species Hikorocodium elegantae from the Permian of Japan, was described originally as a codiacean alga by Endo. It is not a codiacean alga but an inozoid sponge of the family Preperonidellidae. Several fossils described later by Endo and other authors as H. elegantae should be assigned to different inozoid sponge taxa. Specimens of H. fertiliz, described by Endo from the Jurassic of Japan, are also sponge fragments. The taxonomic positions of H. transversum Endo and H. kuramotoi Nakamura, as sponges or

Observer Bias In Anuran Call Surveys, Aaron Lotz, Craig R. Allen

United States Geological Survey: Staff Publications

Amphibian monitoring programs rarely question the quality of data obtained by observers and often ignore observer bias. In order to test for bias in amphibian call surveys, we sampled 29 clusters of wetlands from the Rainwater Basin, Nebraska, USA, totaling 228 functionally connected wetlands. Sampling consisted of 3-minute stops where volunteers recorded species heard and made digital recordings. Based on 627 samples, we examined 3 types of observer bias: omission, false inclusion (commission), and incorrect identification. Misidentification rates ranged from 4.2% to 18.3%. Relatively high and unquantified error rates can negatively affect the ability of monitoring programs to accurately detect …

Unlv Magazine, Grace Russell, Gian Galassi, Shane Bevell, Karyn S. Hollingsworth, Jennifer Lawson, Lori Bachand, Cate Weeks, Erin O'Donnell, Peter Starkweather

UNLV Magazine

No abstract provided.

Effects Of Elevated Atmospheric Co2 On Root Dynamics, Biomass And Architecture In A Scrub-Oak Ecosystem At Kennedy Space Center, Florida, Daniel Benjamin Stover

Biological Sciences Theses & Dissertations

A major gap in whole-plant ecology lies with our understanding of root system growth, function and distribution. Large belowground structures, in addition to fine roots, are of particular interest because of their role in carbon sequestration. Non-destructive methods, including ground-penetrating radar (GPR) and minirhizotron observation tubes, were used to investigate effects of elevated CO₂ on root biomass, dynamics (productivity, mortality, and turnover), root persistence and architecture in a fire dominated scrub-oak ecosystem. Open-top chambers have been exposed to elevated atmospheric CO₂ for the past eleven years at Kennedy Space Center, Florida. No significant sustained CO₂ treatment effects …

Downstream Pathway Activation In Cultured Hepatocytes Following Treatment With Francisella Tularensis, Nicole Wakefield

Undergraduate Theses and Capstone Projects

Francisella tularensis, the intracellular pathogen that causes tularemia, was investigated to determine how it infects and replicates within mammalian hepatocytes. To date, it has been shown that hepatocytes can be infected by F. tularensis and that this causes considerable change in the protein phosphorylation state of several vital signaling molecules within the host cell. Protein kinase pathways can be mapped as signatures of infection. Hepatocytes tend to be susceptible to infection by F. tularensis, thus stimulating internal signaling. The Francisella strains used were selected with the goal of producing a model that can be used to elucidate the cell signaling …