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Predicting Protein Structure Using Parallel Genetic Algorithms, George H. Gates Jr. Dec 1994

Predicting Protein Structure Using Parallel Genetic Algorithms, George H. Gates Jr.

Theses and Dissertations

The protein folding problem is a biochemistry Grand Challenge problem. The challenge is to reliably predict natural three-dimensional structures of polypeptides. Genetic algorithms (GAs) are robust, semi-optimal search techniques modeling natural evolutionary processes. Fast messy GAs (fmGAs) are variants of messy GAs that reduce the exponential time complexity to polynomial. This investigation evaluates the merits of parallel SGAs and fmGAs for minimizing the potential energy of a pentapeptide, (Met)-enkephalin. AFIT's energy model is compared to a similar model in a commercial package called QUANTA. Differences between the two models are identified and resolved to enhance GAs' abilities to correctly fold …

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Parallelization Of The 2d Roe Scheme On The Intel Paragon, John R. Graham Iii Dec 1994

Parallelization Of The 2d Roe Scheme On The Intel Paragon, John R. Graham Iii

Theses and Dissertations

This study presented a methodology for determining the general performance characteristics of a computational fluid dynamics (CFD) algorithm on the Intel Paragon. By performing a rigorous time complexity analysis of a parallel CFD algorithm, the general performance could be characterized before the code was actually parallelized. This was shown by implementing a serial version of the 2-D Roe Scheme on the Paragon. This explicit code was parallelized by the addition of generic yet efficient routines that decomposed the domain, automatically adjusted partition indices, and performed 2-D and 3-D buffer exchanges. Additionally, efficient global routines available for the Paragon were used …

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Enhanced Visual User Interface Support For Domain-Oriented Application Composition Systems, Richard A. Guinto Dec 1994

Enhanced Visual User Interface Support For Domain-Oriented Application Composition Systems, Richard A. Guinto

Theses and Dissertations

This research refined the functionality and usability of a previously developed visual interface for a domain-oriented application composition system. The refinements incorporated more sophisticated user interface design concepts1 to reduce user workload. User workload was reduced through window reordering, menu redesign, and Human Computer Interaction techniques such as; combining repetitive procedures into single commands, reusing composition information whenever possible and deriving new information from existing information. The Software Refinery environment, including its visual interface tool INTERVISTA, was used to develop techniques for visualizing and manipulating objects contained in a formal knowledge base of objects. The interface was formally validated with …

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Using Object-Oriented Database Technology To Develop A Multiple Domain Capability For Domain-Oriented Application Composition Systems, Alfred W. Harris Jr. Dec 1994

Using Object-Oriented Database Technology To Develop A Multiple Domain Capability For Domain-Oriented Application Composition Systems, Alfred W. Harris Jr.

Theses and Dissertations

This thesis describes the design and implementation of a multiple domain capability for a domain-oriented application composition system, named Architect. The research goal was to show how object-oriented database management system (OODBMS) technology can be used to provide simultaneous access to multiple domain-oriented knowledge bases. Since the Architect system was originally designed using the object-oriented paradigm, insertion of OODBMS technology was relatively simple and many of the object-oriented concepts, such as inheritance and aggregation, proved beneficial. Inheritance was used to encapsulate domain knowledge by defining each domain as a subclass of Architect's software architecture. Aggregation was used to allow applications …

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Analytic Performance Models For Parallel Discrete Event Battlefield Simulation With Conservative Synchronization, James B. Hiller Dec 1994

Analytic Performance Models For Parallel Discrete Event Battlefield Simulation With Conservative Synchronization, James B. Hiller

Theses and Dissertations

This study investigated the development and use of analytic models for performance analysis of parallel discrete event battlefield simulation using conservative synchronization. A simulation architecture with layered application, simulation, and host machine services provided the model development basis. Simulation entities were modeled with set-theoretic definitions. Deterministic performance models using these definitions were developed for event prediction, scheduling, and execution in sequential battlefield simulation. The sequential model was expanded to include relative bounds for overhead factors introduced when the simulation is spatially decomposed for a parallel distributed memory machine. Comparison of sequential and parallel models instantiated for a simulation with uniform …

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Modeiing Operational Task Assignment In Air Force Wing Command And Control, Robert J. Hunt Dec 1994

Modeiing Operational Task Assignment In Air Force Wing Command And Control, Robert J. Hunt

Theses and Dissertations

This research investigated the feasibility of applying software engineering technology to the Air Force wing command and control (C2) domain. As part of this research, domain analysis and object-oriented techniques were investigated and a specific approach was chosen to analyze the domain. Analysis of the domain resulted in an object-oriented domain model that captured the key objects, operations, and associations, and behavior of wing C2. The domain model was used to design and implement a prototype software tool that enables wing decision makers to assign resources to mission tasks and to make assessments about automation's impact on wing C2 operations.

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Easy-Sim: A Visual Simulation System Software Architecture With An Ada 9x Application Framework, Jordan R. Kayloe Dec 1994

Easy-Sim: A Visual Simulation System Software Architecture With An Ada 9x Application Framework, Jordan R. Kayloe

Theses and Dissertations

Software architectures increase productivity when used as the basis for developing applications in a problem domain. This thesis describes the creation of Easy-Sim, an object-oriented software architecture for visual simulation systems, and its corresponding implementation as an application framework in Ada 9X. The research built upon ObjectSim, an existing object-oriented simulation architecture implemented as a application framework. Both ObjectSim and Easy-Sim operate on Silicon Graphics platforms and use the IRIS Performer graphics programming library. Easy-Sim is implemented using version 1.83 of the GNAT compiler. The investigation for this thesis involved honing ObjectSim's design, implementing the improved result in both C++ …

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Transportable Agents, Keith D. Kotay, David Kotz Dec 1994

Transportable Agents, Keith D. Kotay, David Kotz

Dartmouth Scholarship

As network information resources grow in size, it is often most efficient to process queries and updates at the site where the data is located. This processing can be accomplished by using a traditional client-server network interface, which constrains the client to the set of queries supported by the server, or requires the server to send all data to the client for processing. The former is inflexible; the latter is inefficient. Transportable agents, which support the movement of the client computation to the location of the remote resource, have the potential to be more flexible and more efficient. Transportable agents …

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Interactive Shape Control And Rapid Display Of A-Patches, Chandrajit L. Bajaj, Jindon Chen, Guoliang Xu Dec 1994

Interactive Shape Control And Rapid Display Of A-Patches, Chandrajit L. Bajaj, Jindon Chen, Guoliang Xu

Department of Computer Science Technical Reports

No abstract provided.

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Display User Manual Version 1.1, Edward Mascarenhas, Vernon J. Rego Dec 1994

Display User Manual Version 1.1, Edward Mascarenhas, Vernon J. Rego

Department of Computer Science Technical Reports

No abstract provided.

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Ariadne User Manual Version 2.0, Edward Mascarenhas, Vernon J. Rego, Vaidy Sunderam Dec 1994

Ariadne User Manual Version 2.0, Edward Mascarenhas, Vernon J. Rego, Vaidy Sunderam

Department of Computer Science Technical Reports

No abstract provided.

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A New Approach To Automatic Target Recognition Using Wavelet Transforms, Anitha Panapakkam, S. N. Balakrishnan, Daniel St. Clair Dec 1994

A New Approach To Automatic Target Recognition Using Wavelet Transforms, Anitha Panapakkam, S. N. Balakrishnan, Daniel St. Clair

Computer Science Technical Reports

Automatic Target Recognition (ATR) systems have significant impact in defense applications. There is a continuing need to develop new and robust techniques to handle the increasingly complex ATR problem. The objectives of this thesis are two-fold. First a new technique to be used for ATR is developed and secondly an integrated ATR system to investigate and combine all subsystems is developed. In this thesis, we have developed a new technique for the feature extraction stage of ATR problem using wavelet transforms. Wavelet transforms have been one of the widely investigated areas of research in the past few years. The promising …

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Performance Monitoring Of Hybrid Intelligent Systems, Nariman Abdel Baky, Fikret Ercal Dec 1994

Performance Monitoring Of Hybrid Intelligent Systems, Nariman Abdel Baky, Fikret Ercal

Computer Science Technical Reports

Development of an automated system to enable the ongoing monitoring and control of the performance of HIS is a step towards increasing the confidence and security with which ordinary users will perceive AI-based Systems. The main objective of this research was to develop a prototype intelligent system to perform this monitoring. The proposed monitming system integrates performance metrics for the HIS's components with heuristics for evaluating data quality by checking data types, data ranges, percentage of missing data and the composition of data. The research demonstrated the possibility of developing such system and the feasibility of using it for a …

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Ccsp - A Formal System For Distributed Program Debugging, Hanan Lutfiyya, Bruce Mcmillin, Beth Arrowsmith, Cristina Serban Dec 1994

Ccsp - A Formal System For Distributed Program Debugging, Hanan Lutfiyya, Bruce Mcmillin, Beth Arrowsmith, Cristina Serban

Computer Science Technical Reports

One major problem with programming in a parallel/distributed environment is the difficulty in debugging the programs owing to the complex interactions of their component processes. Complete knowledge of the program's state is not generally attainable in a distributed system. This paper presents a distributed system for debugging distributed programs that allows for the execution and evaluation of embedded assertions expressed in Hoare's CSP [6]. We show examples of the use of this system, prove its correctness, and describe how the system can be used for the more general case of ensuring an application's correctness at run-time.

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Development Of A Mammographic Image Processing Environment Using Matlab, John L. Kelley Dec 1994

Development Of A Mammographic Image Processing Environment Using Matlab, John L. Kelley

Theses and Dissertations

Breast cancer is a disease that accounts for a disturbingly large number of deaths in females each year. Its prevalence is a topic of concern to all of us since it can affect our families, friends, and coworkers. Although mammographic screening is the most effective method currently available for the early detection of breast cancer, it is far from being an infallible procedure. Mammographic reading is error prone, partly because of the complexity of the task and partly because of the variability in human performance. Computers offer high reproducibility, and when used as an adjunct by the radiologist, may improve …

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Survey And Implementation Of Commercial Manual Controllers For A Generic Telerobotics Architecture, Thomas E. Deeter Dec 1994

Survey And Implementation Of Commercial Manual Controllers For A Generic Telerobotics Architecture, Thomas E. Deeter

Theses and Dissertations

The purpose of this study is to determine an input device for the Air Force's generic telerobotics architecture for large aircraft maintenance and repair. One area of concern is the human to machine interface, more specifically, which manual controller should be used for the specified tasks in this architecture. We mailed a survey to 68 companies in order to compile a list of possible input devices that the telerobotics architecture could use. 32 companies responded which gave me enough data to generate a list that described the physical traits of the input devices. We then divided the required tasks into …

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The Re-Engineering Of The Air Force Institute Of Technology Student Information System, Douglas J. Wu Dec 1994

The Re-Engineering Of The Air Force Institute Of Technology Student Information System, Douglas J. Wu

Theses and Dissertations

This research describes the design and implementation issues associated with re-engineering the Air Force Institute of Technology Student Information System (AFITSIS). Currently, AFITSIS executes on aging relational database technology and has unfriendly user interface mechanisms. The two research objectives met were to research current AFITSIS requirements, design, and implementation, and use object-oriented methods to design an alternative implementation based on proposed object database management system standards. This research explores how AFITSIS performance and capabilities might be enhanced by taking advantage of new object-oriented software engineering techniques. One of the primary benefits of this research is a detailed object modeling technique …

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Modeling Workload Effectiveness And Efficiency Of Air Force Wing Command And Control, Michael D. Sarchet Dec 1994

Modeling Workload Effectiveness And Efficiency Of Air Force Wing Command And Control, Michael D. Sarchet

Theses and Dissertations

This research investigated the feasibility of applying software engineering technology to the Air Force wing command and control (C2) domain. As part of this research, domain analysis and object-oriented techniques were investigated and a specific approach was chosen to analyze the domain. Analysis of the domain resulted in an object-oriented domain model that captured the key objects, operations, and associations of wing C2. The domain model was used to design and implement a prototype software tool that enables wing decision makers to make assessments about automation's impact on wing C2 operations.

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Designing And Implementing An Ada Language Binding Specification For Odmg-93, Stephen R. Lindsay Dec 1994

Designing And Implementing An Ada Language Binding Specification For Odmg-93, Stephen R. Lindsay

Theses and Dissertations

Object-oriented database management systems (ODBMSs) represent the latest advancement in database technology, combining the reusability and maintainability of the object-oriented programming paradigm with the ability to efficiently store and retrieve a wide range of data types as well as code to manipulate stored data. Unfortunately, programmers developing software in the Ada programming language do not have the ability to interface to object databases without significant customized code development. One important reason for this has been the absence of a standard defining the constructs accessing ODBMS functionality. This thesis documents the creation of an Ada language binding to the ODMG-93 standard …

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A Numerical Model To Predict The Fate Of Jettisoned Aviation Fuel, Karl D. Pfeiffer Dec 1994

A Numerical Model To Predict The Fate Of Jettisoned Aviation Fuel, Karl D. Pfeiffer

Theses and Dissertations

While airborne, military and civilian aircraft must occasionally jettison unburned aviation fuel into the atmosphere. This research investigates the fate of a jettisoned fuel (e.g. JP-4, JP-8, etc.) from initial release to final ground fall by numerically modeling the physical phenomena governing the fate of this fuel: evaporation, advection, and dispersion. Using previous work in evaporation and free fall of fuel droplets as a foundation, this thesis presents an integrated evaporation advection and dispersion model designed to run under the resources of a typical personal computer. This integrated model is capable of using near real-time meteorological data (i.e. vertical profiles …

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Multiple Model Adaptive Estimation And Head Motion Tracking In A Virtual Environment: An Engineering Approach, James E. Russell Dec 1994

Multiple Model Adaptive Estimation And Head Motion Tracking In A Virtual Environment: An Engineering Approach, James E. Russell

Theses and Dissertations

Software engineering tools and techniques were applied to design and implement an application that reduces lag typically present in virtual environment displays. The application was a Multiple Model Adaptive Estimator (MMAE), composed of three Kalman filters, that predicted head orientation one sample period into the future. The environment rendering software used these predictions to generate the environment display. Each of the filters in the MMAE was designed for a different assumed head motion type (benign, moderate, or heavy), which allowed the MMAE to adapt to changes in head movement characteristics. The use of Ada 9X as an implementation language for …

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Space Modeler: An Expanded, Distributed, Virtual Environment For Space Visualization, John C. Vanderburgh Dec 1994

Space Modeler: An Expanded, Distributed, Virtual Environment For Space Visualization, John C. Vanderburgh

Theses and Dissertations

The Space Modeler is the first truly immersive virtual environment that models the solar system, models satellites in near-Earth orbit, and can operate in a Distributed Interactive Simulation (DIS) environment. It increases the capabilities of the 1993 Satellite Modeler by expanding the physical limits of the environment and by implementing a new three-dimensional user interface. Satellite orbits are modeled using NASA two line element sets. The positions of the Sun, Moon and planets are computed using an algorithm based on planetary orbital element sets using a linear polynomial fit. For higher precision, the planetary orbits can be computed using an …

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A General Object Model Transformation System, John P. Mullaney Dec 1994

A General Object Model Transformation System, John P. Mullaney

Theses and Dissertations

Cecil and Fullenkamp developed a program that transforms knowledge captured in an object-model in one environment into a different object-model in a different environment. This program worked well for the intended purpose, but if one of the object-models is replaced by a different object-model then this transformation program has to be re-engineered. As the object-modeling paradigm becomes more prevalent, many systems are experiencing this problem. The primary goal of this research was to determine what reusable knowledge could be extracted from these types of program and used to build a general object-model transformer that generalizes such transformation programs. Toward this …

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Unification Of Larch And Z-Based Object Models To Support Algebraically-Based Design Refinement: The Z Perspective, Kathleen M. Wabiszewski Dec 1994

Unification Of Larch And Z-Based Object Models To Support Algebraically-Based Design Refinement: The Z Perspective, Kathleen M. Wabiszewski

Theses and Dissertations

This research established a foundation for formalizing the evolution of based object models to theories, part of a dual approach for formally extending object-oriented analysis models using the Z and LARCH languages. For the initial phase, a comprehensive, consistent, and correct Z language parser was implemented within the SOFTWARE REFINERY™ Programming Environment. The Z parser produced abstract syntax trees (ASTs) of objects, thereby forming the basis for analyzing the similarities and differences between the based and LARCH-based object representations. The second phase used the analysis of the two languages to identify fundamental core constructs that consisted of similar syntactic and …

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Minimizing The Impact Of Synchronization Overhead In Parallel Discrete Event Simulations, Andrew C. Walton Dec 1994

Minimizing The Impact Of Synchronization Overhead In Parallel Discrete Event Simulations, Andrew C. Walton

Theses and Dissertations

A Parallel Discrete Event Simulation Coprocessor was designed for conservative synchronization protocols and was implemented in software using some of a parallel computer's nodes to act as coprocessors. The coprocessor was designed to offload synchronization overhead and next event queue management from the nodes running the simulation. The coprocessor was designed to accelerate simulations based on the Simulation Protocol Evaluation on a Concurrent Testbed with ReUsable Modules (SPECTRUM) environment. The research was conducted in three steps: the SPECTRUM environment was ported from an Intel iPSC-2 to an Intel Paragon XP-S, the coprocessor was designed and the simulations were timed, with …

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Embedology And Neural Estimation For Time Series Prediction, Robert E. Garza Dec 1994

Embedology And Neural Estimation For Time Series Prediction, Robert E. Garza

Theses and Dissertations

Time series prediction has widespread application, ranging from predicting the stock market to trying to predict future locations of scud missiles. Recent work by Sauer and Casdagli has developed into the embedology theorem, which sets forth the procedures for state space manipulation and reconstruction for time series prediction. This includes embedding the time series into a higher dimensional space in order to form an attractor, a structure defined by the embedded vectors. Embedology is combined with neural technologies in an effort to create a more accurate prediction algorithm. These algorithms consist of embedology, neural networks, Euclidean space nearest neighbors, and …

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Image Perception Wavelet Simulation And Enhancement For The Visually Impaired, Lemuel Ray Myers Jr. Dec 1994

Image Perception Wavelet Simulation And Enhancement For The Visually Impaired, Lemuel Ray Myers Jr.

Theses and Dissertations

This research delves into the area of image enhancement for the visually impaired. Binocular macular degeneration a visual impairment, affects many Americans; since this condition could not be corrected with conventional glasses the literature suggested using an enhancement system which used a pre-emphasis algorithm to enhance the input image for output to the observer. The work of Dr. Eli Peli, a pioneer in the field of image enhancement, is examine and reproduced. Since his work concentrated mainly on frequency analysis of images, the bulk of this research involves using discrete wavelet analysis to augment that work. A biorthogonal wavelet set …

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A Comparison Of Error Categorization Schemes For Use In Software System Safety Programs, Richard Escobedo, Jim Thomas Dec 1994

A Comparison Of Error Categorization Schemes For Use In Software System Safety Programs, Richard Escobedo, Jim Thomas

Theses and Dissertations

Software safety is becoming increasingly important in the development of DoD advanced weapon systems. To make software safer, hazard conditions must be avoided along with the errors that accompany them. The first step in identifying errors is classifying error data. The area of software error classification is not as advanced as other software development areas. The technical literature lacks examples of comprehensive taxonomies that can be applied to various computer software domains and applications. The predominant approach is to organize errors into categories particular to the program currently in work. The typical error scheme is made of narrow categories that …

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A Correlational Study Of The Sei's Capability Maturity Model And Software Development Performance In Dod Contracts, Robert M. Flowe, James B. Thordahl Dec 1994

A Correlational Study Of The Sei's Capability Maturity Model And Software Development Performance In Dod Contracts, Robert M. Flowe, James B. Thordahl

Theses and Dissertations

The Software Engineering Institute's (SEl's) Capability Maturity Model (CMM) is to measure an organization's software development process maturity. The Department of Defense (DoD) has model with the belief that a more mature software development process will result in a more successful software subject. Although there is a growing body of anecdotal evidence supporting this presumed correlation, there is empirical evidence. Thus, the goal of our research was to determine the nature of the correlation, if any, :ware process maturity and software project success, where process maturity is based on a CMM rating and success based on the parameters of cost …

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Factors In Human-Computer Interface Design (A Pilot Study), Susan Stewart Dec 1994

Factors In Human-Computer Interface Design (A Pilot Study), Susan Stewart

Theses and Dissertations

The DoD has budgeted over $9.8 billion for 1995 for information technology, yet many government office workers let their existing systems sit idle. This thesis explores why these computers are sitting idle. This researcher's initial hypothesis was that certain features of the human-computer interface can positively or negatively affect efficiency, retention, and satisfaction level of workers. Although some research is being done in this area, interfaces continue to be of poor quality, especially in the DoD, where long procurement cycles, forced purchases, and limited budgets result in out-of-date software. Intuitively most programmers know the human-computer interface impacts on a person's …

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