Digital Commons Network^™

“Silent Is Not Actually Silent”: An Investigation Of Toxicity On Bug Report Discussion, Mia Mohammad Imran, Jaydeb Sarker

Computer Science Faculty Research & Creative Works

Toxicity in bug report discussions poses significant challenges to the collaborative dynamics of open-source software development. Bug reports are crucial for identifying and resolving defects, yet their inherently problem-focused nature and emotionally charged context make them susceptible to toxic interactions. This study explores toxicity in GitHub bug reports through a qualitative analysis of 203 bug threads, including 81 toxic ones. Our findings reveal that toxicity frequently arises from misaligned perceptions of bug severity and priority, unresolved frustrations with tools, and lapses in professional communication. These toxic interactions not only derail productive discussions but also reduce the likelihood of actionable outcomes, …

Llput: Investigating Large Language Models For Bug Report-Based Input Generation, Alif Al Hasan, Subarna Saha, Mia Mohammad Imran, Tarannum Shaila Zaman

Computer Science Faculty Research & Creative Works

Failure-inducing inputs play a crucial role in diagnosing and analyzing software bugs. Bug reports typically contain these inputs, which developers extract to facilitate debugging. Since bug reports are written in natural language, prior research has leveraged various Natural Language Processing (NLP) techniques for automated input extraction. With the advent of Large Language Models (LLMs), an important research question arises: how effectively can generative LLMs extract failure-inducing inputs from bug reports? In this paper, we propose LLPut, a technique to empirically evaluate the performance of three open-source generative LLMs-LLaMA, Qwen, and Qwen-Coder-in extracting relevant inputs from bug reports. We conduct an …

Urban Landscape Recovery And Lulc Analysis: A Deep Learning Approach To Post-Extreme Rainfall Impacts In Dubai, Xin Hong

All Works

From April 14 to 18, 2024, the United Arab Emirates (UAE) experienced its heaviest rainfall in 75 years, resulting in widespread flooding across multiple emirates, including Dubai. This study utilizes high-resolution PlanetScope imagery and a U-Net deep learning model to assess the flood impact and analyze post-rainfall recovery patterns in Dubai’s urban landscape. By integrating Sentinel-2derived land use and land cover (LULC) data to refine the training dataset, a high-accuracy U-Net model was developed through transfer learning that effectively classified pre- and post-rainfall LULC. Post-rainfall LULC change detections indicate that 23.8 km² of land was flooded, which is equivalent …

More Everything Forever: Ai Overlords, Space Empires, And Silicon Valley’S Crusade To Control The Fate Of Humanity, Joseph Kirby

Consensus

Becker, A. (2025). More everything forever : AI overlords, space empires, and Silicon Valley’s crusade to control the fate of humanity. Basic Books. ISBN: 9781541619593

Improving Large Language Models’ Summarization Accuracy By Adding Highlights To Discharge Notes: Comparative Evaluation, Mahshad Koohi Habibi Dehkordi, Yehoshua Perl, Fadi P. Deek, Zhe He, Vipina K. Keloth, Hao Liu, Gai Elhanan, Andrew J. Einstein

School of Computing Faculty Scholarship and Creative Works

Background: The American Medical Association recommends that electronic health record (EHR) notes, often dense and written in nuanced language, be made readable for patients and laypeople, a practice we refer to as the simplification of discharge notes. Our approach to achieving the simplification of discharge notes involves a process of incremental simplification steps to achieve the ideal note. In this paper, we present the first step of this process. Large language models (LLMs) have demonstrated considerable success in text summarization. Such LLM summaries represent the content of EHR notes in an easier-to-read language. However, LLM summaries can also introduce inaccuracies. …

Coli@Fire2024: Findings Of Word-Level Code-Mixed Language Identification In Dravidian Languages, Asha Hegde, Fazlourrahman Balouchzahi, Sabur Butt, Sharal Coelho, Kavya G, Harshitha S. Kumar, Sonith D, Shashirekha H. L., Ameeta Agrawal

Computer Science Faculty Publications and Presentations

Code-mixing, a linguistic phenomenon where multiple languages are blended within a single text, has become increasingly prevalent in multilingual societies, particularly in digital communication. The CoLI-Dravidian shared task, organized as part of Forum for Information Retrieval and Evaluation (FIRE) 2024, aimed to address these challenges by inviting researchers to develop models capable of classifying words in code-mixed texts involving Dravidian languages — Tamil, Kannada, Malayalam, and Tulu - interwoven with English. The task presents significant challenges due to the complexity of linguistic structures, mixed-language tokens, and dialectal variations, especially in low-resource languages like those in the Dravidian family. The participating …

Investigating The Impact Of Agent Openness On Planning In Multi-Agent Systems, Bala Subramanyam Duggirala

School of Computing: Dissertations, Theses, and Student Research

Multi-agent systems (MAS) possess significant potential for modeling real-world scenarios requiring coordinated actions (like wildfire fighting or ridesharing) among autonomous entities or agents (e.g., wildfire fighting agents) in complex, dynamic environments. Effective decision-theoretic planning (where each agent must carefully consider both the immediate and the future situations or states, and coordinate with the other agents (neighbors) to evaluate what needs to be done at present) within MAS, especially multiagent planning, where the planning agent directly models its neighbors in order to estimate their optimal actions, is critical, yet challenged by factors like partial observability, openness, and diverse agent types with …

Zero Trust Architecture For Electric Transportation Systems: A Systematic Survey And Deep Learning Framework For Replay Attack Detection, Grace Muriithi, Behnaz Papari, Ali Arsalan, Laxman Timilsina, Alex Muriithi, Elutunji Buraimoh, Asif Khan, Gokhan Ozkan, Christopher Edrington, Akram Papari

Montclair State University Scholarship & Creative Works

Modern and autonomous hybrid electric vehicles (HEVs), as complex cyber-physical systems, represent a key innovation in the future of transportation. However, the increasing interconnectivity and reliance on digital components expose these vehicles to significant cybersecurity risks. To address these challenges, Zero Trust Architecture (ZTA) has emerged as a promising security framework. Operating on the principle of ‘never trust, always verify,’ ZTA offers a comprehensive approach to ensuring continuous trust verification in HEV systems. Despite its potential, the application of ZTA within cyber-physical vehicular systems remains underexplored, and its practical benefits and limitations are not yet fully understood by the engineering …

Multiscale Modeling And Dynamic Mutational Profiling Of Binding Energetics And Immune Escape For Class I Antibodies With Sars-Cov-2 Spike Protein: Dissecting Mechanisms Of High Resistance To Viral Escape Against Emerging Variants, Mohammed Alshahrani, Vedant Parikh, Brandon Foley, Gennady M. Verkhivker

Mathematics, Physics, and Computer Science Faculty Articles and Research

The rapid evolution of SARS-CoV-2 has underscored the need for a detailed understanding of antibody binding mechanisms to combat immune evasion by emerging variants. In this study, we investigated the interactions between Class I neutralizing antibodies—BD55-1205, BD-604, OMI-42, P5S-1H1, and P5S-2B10—and the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein using multiscale modeling, which combined molecular simulations with the ensemble-based mutational scanning of the binding interfaces and binding free energy computations. A central theme emerging from this work is that the unique binding strength and resilience to immune escape of the BD55-1205 antibody are determined by leveraging a broad epitope …

Effects Of Plasma-Activated Water On Wheat: Germination And Seedling Development, Wafaa Abdulrazzaq Abdullah, Hadeel O. Ismael, Duaa A. Uamran, Hammad R. Humud

Karbala International Journal of Modern Science

The food sector must contend with issues such as pathogen resistance to some of the available chemical agents, environmental pollution, and climate change to provide healthy food for livestock and people. The application of atmospheric pressure plasma jets (APPJs) is one potential solution for such problems. Plasma is appropriate for effective surface decontamination regarding food products and seeds, surface decontamination, and achieving improved agricultural production yields. The impact of plasma-activated water (PAW) produced by plasma jet discharge (PJD) system on in vitro-cultivated wheat seeds is examined in this work. For this aim, a plasma jet system was constructed with a …

Teaching Ai Ethics And Skepticism: The Impact Of Instruction On Ethical Usage On Students’ Perceptions, Jenna D. Justin

Journal of Practitioner Research

This study investigates the ethical implications of artificial intelligence (AI) in K-12 education, focusing on how explicit instruction influences students' perceptions of AI tools like ChatGPT. Conducted with 80 sixth-grade students at A.D. Henderson University School and FAU High School, the research tracks changes in student understanding and skepticism of AI following a World History unit. Pre- and post-instruction surveys revealed a decline in comfort with AI as students became more aware of its ethical concerns, including plagiarism, bias, and misinformation. The findings suggest integrating AI ethics into the middle school curriculum to foster responsible AI usage among students.

Policy-Based Redactable Set Signatures, Zachary A. Kissel

Computer and Data Science Faculty Publications

A redactable set signature scheme is a signature scheme that allows a redactor, without possessing the signing key, to convert a signature on set S to a signature on set S' if S' ⊂ S. This paper introduces a new form of redactable set signature scheme called a policy-based redactable set signature scheme. These redactable set signatures allow for a signer to provide a redaction policy at signing time that limits the possible redactions that can be made by a redactor. In particular, a signature on set S can only be redacted to a signature on if S' ⊂ …

Digital Identity Management As A Critical Criminal Justice And Homeland Security Legal Issue: A Qualitative Analysis Of The Reasonable Person Factors Involved In Court Decisions, William H. Nicholson

Doctoral Dissertations and Projects

The purpose of this descriptive qualitative applied study is to define and explain through analysis the reasonable person standard as it relates to prosecution and sentencing computer crime cases involving digital identities while addressing the problem of digital anonymity. This has been done by analyzing computer crime cases with the advent of current and planned technologies, and surveying potential jurors to understand the current state of knowledge of digital attribution. This descriptive qualitative research method analyzed the problem through the use of criminological theories of control and social learning theory to better understand the reasonable person standard in computer crime …

Securing Ai-Generated Code, Andreas E. Nelson

Scholarly Horizons: University of Minnesota, Morris Undergraduate Journal

The increasing use of AI for code generation presents significant security challenges, as these tools often lack inherent security awareness and can produce vulnerable code. This paper investigates these security risks, outlining common types of vulnerabilities (such as injection flaws and improper resource handling) found in AI-generated code. It further explores and evaluates mitigation techniques aimed at im-proving code security, including model fine-tuning and adversarial strategies like Security Verifier Enhanced Neural Steering (SVEN). Findings indicate that while current methods offer promising ways to reduce vulnerabilities, ongoing research and development are crucial for the secure and responsible deployment of AI in …

Relightable Neural Radiance Fields For Novel View Synthesis, Malena I. Mahoney

Scholarly Horizons: University of Minnesota, Morris Undergraduate Journal

This paper describes relighting neural radiance fields for novel view synthesis. View synthesis is the problem of using input images with corresponding camera angles to produce a photorealistic 3D model of an environment and its objects. Neural radiance fields (NeRFs) were created as a solution to view synthesis. Neural radiance field models work well for generating realistic 3D models from 2D image inputs; how-ever, they do not support changing the lighting or placing the objects from the input images into different environments. The problem comes from the fact that NeRFs rely on a neural network that is essentially overfitted to …

A Longitudinal Analysis Of Morphological Shape Variation Of Spleen In Patients With Fontan Surgery, Varatharajan Nainamalai, Håvard Bjørke Jenssen, Mostafa Rezaeitaleshmahalleh, Djinaud Prophete, Jordan Gosnell, Sarah Khan, Marcus Haw, Jingfeng Jiang, Joseph Vettukattil

Michigan Tech Publications

Background: Splenic size serves as a surrogate biomarker for predicting portal vein hyper-tension and liver abnormalities in subjects with Fontan Associated Liver Disease (FALD). We analyze the long-term shape variation of the spleen in FALD subjects using morphological shape features of radiomic features. Methods: We used 154 (84 from computed tomography and 70 from magnetic resonance) image volumes obtained from 36 individuals who underwent stage 3 Fontan procedure and 145 computed tomography images from controls to assess splenomegaly. To understand the splenomegaly, thirteen shape features of the spleen over three 10-year intervals, and variations between controls and FALD subjects were …

A Comprehensive Deep Learning System With Mgrf Modeling For Predicting Breast Cancer Response To Neoadjuvant Chemotherapy, Ahmed Sharafeldeen, Fatma Taher, Norah Saleh Alghamdi, Eman Alnaghy, Reham Alghandour, Khadiga M. Ali, Sameh Shamaa, Abdelrahman Gamal, Mohammed Ghazal, Sohail Contractor, Ayman El-Baz

All Works

Accurate prediction of breast cancer (BC) response to neoadjuvant chemotherapy (NAC) is critical for tailoring treatment strategies and improving patient outcomes. This study introduces a novel deep learning-based framework that integrates multi-parametric magnetic resonance imaging (MRI) (i.e., T1, T2, STIR, and DWI), along with clinical and molecular subtype markers, to classify tumor response into pathological complete response (pCR), partial response (PR), and stable disease (SD). First, tumor regions are delineated across MRI modalities and then modeled using a translation-invariant Markov-Gibbs random field (MGRF) with analytical parameter estimation to capture modality-specific spatial appearance patterns correlated with NAC response. Subsequently, diffusion-weighted MRI …

A Web Application For Generating Argument Maps For Essays Using Llms, Alexis R. Chalmers

Theses

Argumentative writing is a critical skill that strengthens students’ reasoning, communication, and analytical abilities. However, maintaining a clear and organized argument structure while writing can be challenging. Argument maps — visual diagrams which explicitly show an argument’s structure — have been shown to improve students’ writing, but are rarely used outside of the planning stage of an essay due to the time and effort required to create them. Automatically generating argument maps from student essays helps students to evaluate the structure of their argument as they write and makes identifying unsupported claims visible. To evaluate whether large language models (LLMs) …

Research On Requirements And Methods For Intelligent Assessment Of Simulation Credibility, Bingheng Wang, Tingrui Liu, Fan Yang, Huan Zhang, Wei Li, Ping Ma, Ming Yang

Journal of System Simulation

Abstract: The accuracy of simulations in representing real-world systems is a critical concern for users. Simulation credibility assessment ensures trustworthiness by evaluating the correctness and effectiveness of simulations to meet application requirements. As simulation technologies are widely adopted, and new simulation paradigms emerge, traditional assessment methods are increasingly showing limitations in their dependence on experts, data processing capabilities, and assessment efficiency. This paper systematically reviewed the research demands, current progress, new technologies, and future trends of intelligent simulation credibility assessment. Based on the simulation credibility assessment process and problem analysis, the requirements for intelligent credibility assessment were discussed. Intelligent technologies …

What Drives Weight Status Among Female University Students? A Machine Learning Analysis Of Sociodemographic, Dietary, And Lifestyle Determinants, Radwan Qasrawi, Abir Ajab, Leila Cheikh Ismail, Ayesha Al Dhaheri, Sharifa Alblooshi, Razan Abu Ghoush, Stephanny Vicuna Polo, Malak Amro, Suliman Thwib, Ghada Issa, Haleama Al Sabbah

All Works

Background: Obesity and underweight are increasingly common among young adult women, often resulting from complex interactions between diet, lifestyle, and socioeconomic factors. This study addresses that gap by applying machine learning to a wide range of behavioral, dietary, and demographic data. The main research question asks: What are the key factors influencing weight status among female university students, and how accurately can machine learning models identify them? We hypothesize that different factors are significantly associated with underweight, overweight, and obesity, and that machine learning can reliably detect these patterns. The aim is to identify the strongest predictors and support more …

Detecting Android Malware Based On Static Analysis Using Classification And Modified Clustering Techniques, Abdullah Allawi Al-Sraratee, Ahmed Habeeb Al-Azawei

Journal of Intelligent Informatics, Networking, and Cybersecurity

Because Android malware harms internet security, prior research proposes several different approaches to detect it accurately. However, such proposed models depend on numerous number of features to attain high accuracy. This could lead to high computation cost and potential overfitting. Furthermore, manual data labeling is labor-intensive, requiring significant human effort and skills. This research aims to: 1) extend previous literature on Android malware detection, 2) improve the accuracy of Android malware detection based on a low number of features, and 3) modify a clustering technique to group data into two different clusters to address the issue of unlabeled data. To …

Limitations Of Using Large Language Models For Automated Essay Scoring, Thomas A. Fink

Theses

Background: Automated essay scoring (AES) is a challenging deep learning problem. The two most widely used methods for predicting essay quality scores, supervised learning-based and LLM-based, have their own limitations. Although supervised learning-based methods are more accurate, they only predict a score and do not offer descriptive feedback to students. On the other hand, LLM-based methods can offer rubric-guided feedback but are known to be less accurate.

Methods: This work focuses on improving the accuracy of state-of-the-art LLM-based AES methods. We began by thoroughly investigating why these methods were performing poorly for certain datasets and certain examples. This led us …

Predicting Sleep And Sleep Stage In Children Using Actigraphy And Heartrate Via A Long Short-Term Memory Deep Learning Algorithm: A Performance Evaluation, Robert Weaver Med, Phd, James White, Olivia Finnegan, Hongpeng Yang, Zifei Zhong, Keagan Kiely, Catherine Jones, Yan Tong, Srihari Nelakuditi, Rahul Ghosal, David E. Brown, Russell R. Pate Ph.D., Gregory J. Welk, Massimiliano De Zambotti, Yuan Wang, Sarah Burkart, Elizabeth L. Adams Phd, Bridget Armstrong, Michael Beets Med, Mph, Phd

Faculty Publications

Children's ambulatory sleep is commonly measured via actigraphy. However, traditional actigraphy measured sleep (e.g., Sadeh algorithm) struggles to predict wake (i.e., specificity, values typically < 70) and cannot predict sleep stages. Long short-term memory (LSTM) is a machine learning algorithm that may address these deficiencies. This study evaluated the agreement of LSTM sleep estimates from actigraphy and heartrate (HR) data with polysomnography (PSG). Children (N = 238, 5–12 years,52.8% male, 50% Black 31.9% White) participated in an overnight laboratory polysomnography. Participants were referred be-cause of suspected sleep disruptions. Children wore an ActiGraph GT9X accelerometer and two of three consumer wearables(i.e., Apple Watch Series 7, Fitbit Sense, Garmin Vivoactive 4) on their non-dominant wrist during the polysomnogram. LSTM estimated sleep versus wake and sleep stage (wake, not-REM, REM) using raw actigraphy and HR data for each 30-s epoch. Logistic regression and random forest were also estimated as a benchmark for performance with which to compare the LSTM results. A 10-fold cross-validation technique was employed, and confusion matrices were constructed. Sensitivity and specificity were calculated to assess the agreement between research-grade and consumer wearables with the criterion polysomnography. For sleep versus wake classification, LSTM outperformed logistic regression and random forest with accuracy ranging from 94.1to 95.1, sensitivity ranging from 94.9 to 95.9 across different devices, and specificity ranging from 84.5 to 89.6. The addition of HR improved the prediction of sleep stages but not binary sleep versus wake. LSTM is promising for predicting sleep and sleep staging from actigraphy data, and HR may improve sleep stage prediction.

Using Confidence Scores To Improve Eyes-Free Detection Of Speech Recognition Errors, Sadia Nowrin, Keith Vertanen

Michigan Tech Publications

Conversational systems rely heavily on speech recognition to interpret and respond to user commands and queries. Despite progress on speech recognition accuracy, errors may still sometimes occur and can significantly affect the end-user utility of such systems. While visual feedback can help detect errors, it may not always be practical, especially for people who are blind or low-vision. In this study, we investigate ways to improve error detection by manipulating the audio output of the transcribed text based on the recognizer's confidence level in its result. Our findings show that selectively slowing down the audio when the recognizer exhibited uncertainty …

Identifying The Desired Word Suggestion In Simultaneous Audio, Dylan Gaines, Keith Vertanen

Michigan Tech Publications

We explore a method for presenting word suggestions for non-visual text input using simultaneous voices. We conduct two perceptual studies and investigate the impact of different presentations of voices on a user's ability to detect which voice, if any, spoke their desired word. Our sets of words simulated the word suggestions of a predictive keyboard during real-world text input. We find that when voices are simultaneous, user accuracy decreases significantly with each added word suggestion. However, adding a slight 0.15 s delay between the start of each subsequent word allows two simultaneous words to be presented with no significant decrease …

Perceptions Of Blind Adults On Non-Visual Mobile Text Entry, Dylan Gaines, Keith Vertanen

Michigan Tech Publications

Text input on mobile devices without physical keys can be challenging for people who are blind or low-vision. We interview 12 blind adults about their experiences with current mobile text input to provide insights into what sorts of interface improvements may be the most beneficial. We identify three primary themes that were experiences or opinions shared by participants: the poor accuracy of dictation, difficulty entering text in noisy environments, and difficulty correcting errors in entered text. We also discuss an experimental non-visual text input method with each participant to solicit opinions on the method and probe their willingness to learn …

Digital Forensics And Ai: Artifact Analysis And Using Ai In The Forensics Domain, Clinton Joel Walker

LSU Doctoral Dissertations

Digital Forensics (DF) is a field of forensic science focusing on the acquisition, authentication, and analysis of digital evidence while maintaining integrity of that data. DF analysts use forensic tools to parse large volumes of data for investigations and depend on them for identification of pertinent digital evidence in vast amounts of data. Keeping up with innovations and ever-expanding data volumes is a constant challenge for these investigators. The prevalence of Artificial Intelligence (AI) in everyday computing is rapidly expanding, with the use of Machine Learning (ML) and Large Language Models (LLM)s becoming increasingly commonplace. Innovations in technology bring new …

Creativity And Curb Cuts: Experiences In Our First Offering Of A Front End Development And Accessibility Focused Cs Course, Briana C. Bettin, Tony Garnett, Alex Gore, Andrea Llanas

Michigan Tech Publications

Students learn an abundance of technical skills while obtaining a computer science degree. The ability to develop meaningful front end user interfaces is often considered the domain of only ''more artistic'' CS students. However, for users to effectively engage with any piece of software, functional user interfaces are critical. Moreover, even among students who have front end skills, semantic and accessible design is all too often less considered. The first author piloted a ''Front End Development and Accessibility'' course this past Fall. This course teaches basic skills of front end with web and leverages key accessibility standards via WCAG. This …

Seeking Structure In Complex Systems: From Feature Analysis To Space-Time Causal Discovery With Earth Science Applications, Jeffrey J. Nichol

Computer Science ETDs

Complex systems are difficult to study because of their many interacting parts, emergent phenomena, and feedback loops. These systems underpin all life on Earth. We need improved tools for seeking an understanding of them. This body of research presents my investigations into data-driven methods for understanding complex systems, including my invention of a novel causal discovery meta-algorithm for space-time gridded data. I demonstrated machine learning feature importance and causal discovery capabilities for comparing simulated and observed climate data. I developed a new benchmark for modeling space-time dynamics of locally driven phenomena and examined a prominent causal discovery algorithm. Finding that …

A Novel Chaotic Dna-Based Image Cryptosystem Leveraging Euclidean Division, Dynamic Josephus Traversal, And Reservoir Computing, Ahmed Kareem Shibeeb, Salah Albermany, Sadiq A. Mehdi

Karbala International Journal of Modern Science

This study presents a new chaotic DNA-based image cryptosystem that combines Euclidean division, dynamic Josephus traversal (DJT), and reservoir computing to address the weaknesses of current methods. Old chaotic DNA cryptosystems usually have problems such as using the same keys for different messages, simple DNA processes, and being vulnerable to attacks where the attacker can choose the input or try many options. The cryptosystem in this study uses a 7D hyperchaotic system that starts with keys created from SHA-512 hashes to produce changing keystreams based on the plaintext, making it very strong against such attacks. The proposed cryptosystem uses a …