Digital Commons Network^™

Investigating Information Extraction And Language Models In Medical Domain Text Processing, Pouyan Nahed

UNLV Theses, Dissertations, Professional Papers, and Capstones

This dissertation demonstrates that carefully adapted language-model pipelines can transform unstructured clinical-trial and pharmacological prose into reliable, low-latency structured data. Four interconnected studies support this claim.Tri-AL platform. An open-source dashboard ingests all 440 k+ ClinicalTrials.gov records—including every historical revision—into a normalized schema and parses the 20 GB XML archive over 10x faster than a BeautifulSoup baseline, while exposing hooks for demographic analytics and supporting integration of user-defined modules. Clinical trial summarization. An encoder–decoder model is trained on 57k description–summary pairs to condense clinical trials into a few sentences. ROUGE evaluation shows a 20% improvement over the baseline, while graph-based evaluation …

Csa-Xai: Channel–Spatial Attention And Explainable Ai In A Modular Multi-Backbone Framework For Lung Cancer Classification, Omar Ibrahim Obaid, Abdulbasit Alazzawi

Iraqi Journal for Computer Science and Mathematics

Computed tomography (CT) scans require precise and early lung cancer detection to produce better clinical results. High accuracy in deep learning approaches (DL) poses an existing challenge to interpret their functionality effectively. This research presents an innovative modular multi-backbone structure that combines channel-spatial attention together with explainable AI (XAI) methods for three-class lung cancer diagnosis (Normal, Benign, and Malignant). Research was carried out to evaluate six pre-trained CNN backbones (ResNet-50, VGG19, Inception-V3, EfficientNet-B0, MobileNet-V2, DenseNet-121) which received hybrid attention enhancement on the IQ-OTH/NCCD dataset. The experimental data showed four pre-trained models reaching perfect accuracy at 100 percent whereas the others …

Class Weighting In Imbalanced Data For Leukocyte Classification Using Fine-Tuning Inception-V3, Wahyudi Setiawan, Meidya Koeshardianto, Eka Mala Sari Rochman, Aeri Rachmad, Tutut Herawan

Iraqi Journal for Computer Science and Mathematics

This study investigates the classification of leukocyte images in an imbalanced dataset using deep learning techniques. The dataset consists of 14,514 images, categorized into five leukocyte types: basophils (301), neutrophils (8,891), lymphocytes (3,461), monocytes (795), and eosinophils (1,066). To address class imbalance, we applied class weighting alongside transfer learning and fine-tuning using the Inception-v3 architecture. The dataset was split into 80% for training and 20% for testing, and 5-fold cross-validation was conducted to evaluate model robustness. Hyperparameters were set with a learning rate of 0.0001, batch size of 32, and 30 training epochs, optimized using the Adam optimizer. Fine-tuning was …

Symmetric Toeplitz Matrices For A Class Of New Subclass Functions And Bazilevič Functions, Nihad H. Shehab, Abdul Rahman S. Juma

Iraqi Journal for Computer Science and Mathematics

In this work, we describe and investigate a novel collection of analytic functions, including the new functions and the Bazilevič functions. An important component of analytic functions, Bazilevič functions have numerous uses in both pure and practical mathematics. For this class of functions, we concentrate on building Toeplitz matrices, examining their structural characteristics, and evaluating their eigenvalues and trends. We utilise these studies to draw sophisticated mathematical conclusions on the stability and convergence characteristics of Bazilevič functions, as well as possible uses in geometry and differential equations. This work aims to determine coefficient estimates for the functions in this family …

Accelerating Gnn Inference On Multi-Core Systems, Binglin Ji

McKelvey School of Engineering Graduate Student Theses & Dissertations

Graph Neural Networks (GNNs) are becoming increasingly popular, with their applications expanding across diverse domains. As the scale of graph data continues to grow, including larger numbers of nodes, edges, and higher embedding dimensions, standardized libraries such as DGL and PyG have been developed to facilitate GNN computation. However, with the rapid increase in the number of processor cores and the evolution of multi-core architectures, these libraries often show poor scalability and fail to execute GNN inference efficiently on the latest multi-core systems, particularly those with upwards of a hundred cores. To address this limitation, we present FGI, a Fast …

Retracted: Mathematical Properties And Simulations Of The Neutrosophic Gompertz-Inverse Burr-X Distribution With Application To Under-Five Mortality, Mustafa Hassan Jumaa, Asmaa S. Qaddoori, Sara A. Khalaf, Nooruldeen A. Noori, Mundher A. Khaleel

Iraqi Journal for Computer Science and Mathematics

Despite significant progress in the development of statistical distributions, there remain clear gaps in modelling complex datasets, such as those involving uncertainty or requiring flexible representations of multidimensional variables. This study introduces a new distribution the Neutrosophic Gompertz-Inverse Burr-X (NGoIB-X) distribution to address these challenges. The model is based on the Neutrosophic Gompertz family (NGo-G), which itself employs the T-X method in its formulation. Characterised by four Neutrosophic parameters and a Neutrosophic random variable, the NGoIB-X distribution offers enhanced flexibility for representing and analysing uncertain data. The theoretical properties of the NGoIB-X distribution are explored, including its Neutrosophic probability density …

A New Lightweight Encryption Method Based On The Dna-Rc4 Substitution For Resource-Constrained Iot Devices, Athraa J. H. Witwit, Ahmed Fanfakh, Ali Kadhum Idrees

Iraqi Journal for Computer Science and Mathematics

Technology's impact on daily life necessitates increased data protection. Cryptographic systems improve security, ensuring confidentiality and legitimacy of Internet of Things systems. However, resource-constrained devices face challenges like memory, battery life, processing power, and small size. In light of this, lightweight cryptography (LWC) provides techniques specifically tailored to the constraints of resource-constrained Internet of Things devices. However, the presence of a fixed S-Box in some LWC algorithms, such as Advanced Encryption Standard, or the absence of one in others, such as Speck and Tiny Encryption Algorithm, renders them more susceptible to attacks. In this paper, we suggest a new lightweight …

Streamlining The Cleaning And Analysis Of Eye Tracking Data For Cross-Recurrence Analysis, Michael V. Rosalia

McNair Summer Research Program

The use of multimodal data to understand and support collaborative learning has grown in popularity recently as it allows researchers to study complex learning tasks from different facets. However, multimodal analysis is often computationally complex and often requires a strong set of technical skills and mathematical understanding to clean and process the data, creating barriers that restrict researchers without advanced programming skills from conducting these analyses. There are existing software packages that can help with this process, but they are often piecemeal requiring the user to understand how to put them together and what best practices may entail. This can …

Towards Applying Artificial Intelligence To Solve Np-Complete Problems Using Quantum Computing, Andrew Robert Haverly

Theses and Dissertations

This dissertation explores the methodology for more thoroughly entangling artificial intelligence and quantum computing. This is explored through a background search of problems solved using Grover’s quantum algorithm, a new quantum protein folding and drug discovery algorithm, using Grover’s algorithm to train quantum artificial neural networks, using quantum artificial neural networks for reinforcement learning, mapping classical assembly instructions to quantum circuits to make quantum programming easier, and using prompt engineering to get a classical artificial intelligence agent to solve an NP-Complete problem using a Grover’s algorithm. This method not only simplifies the creation of algorithms but also opens new avenues …

Kernel Principal Component Analysis And Convolutional Neural Network-Based Approach For Obstructive Sleep Apnoea Detection Using Electrocardiogram, Aida Noor Indrawati, Nuryani Nuryani, Wiharto Wiharto, Diah Kurnia Mirawati, Trio Pambudi Utomo, Nanang Wiyono

Iraqi Journal for Computer Science and Mathematics

Obstructive Sleep Apnoea (OSA) is a prevalent sleep disorder characterised by repeated episodes of partial or complete upper airway obstruction during sleep, primarily due to the relaxation and collapse of soft tissues in the throat. These interruptions lead to disrupted sleep patterns and reduced oxygen saturation, increasing the risk of cardiovascular complications. Although Polysomnography (PSG) is considered the gold standard for diagnosing OSA, it is often uncomfortable for patients due to the extensive use of sensors and prolonged monitoring duration. As a result, there is a growing need for alternative diagnostic methods that are more efficient, comfortable, and cost-effective. This …

Iraqi’S Car License Plate Recognition Based On Deep Learning, Mushreq Abdulhussain Shuriji, Husam Al-Behadili, Hadel A. Hussain

Iraqi Journal for Computer Science and Mathematics

Vehicle license plate recognition is essential due to the rising number of operational cars, which leads to an increasing difficulty of this task even for humans. Systems for car license recognition normally consist of two branch systems, namely, license plate recognition and license plate detection. The aim of the detection part is to pinpoint the car and the position of its license plate, while the objective of the recognition part is to recognize characters on that plate. In this work, the emphasis is on Arabic car license plates. In this category of plates, there are three lines containing numerals and …

Retracted: High-Performance System For Predicting Icu Patient Durations Using Artificial Neural Networks With Transfer Learning, Mahmood. K. Awsaj, Yousif Al Mashhadany, Lamia Chaarifourati

Iraqi Journal for Computer Science and Mathematics

In the wake of disease outbreaks such as COVID-19, real-time health monitoring and prediction systems have become essential for ensuring effective patient care. These systems rely on sensors to monitor biometric parameters such as blood pressure, body temperature, and heart rate, providing continuous and accurate data that medical staff cannot collect manually around the clock. This study presents a robust framework for managing Intensive Care Unit (ICU) patients using Artificial Neural Networks (ANN) with Transfer Learning. The data is analyzed across five distinct time windows, each representing a period of ICU stay based on vital signs and medical test results. …

Reinforcement Learning And Virtual Human Animation: A Novel Approach To Data-Driven Animation, Portraying Dynamic, Flexible Human-Like Behaviours, Vihanga Gamage

Dissertations

Virtual characters require animation capable of portraying dynamic, context-sensitive human-like behaviours. Several approaches to generating such animation have been developed, but each carries limitations. Motion capture can produce high-fidelity animation but is expensive and ill-suited to systems that must respond in real time. Physics-based reinforcement learning (RL) enables flexible, dynamic behaviour portrayal, yet relies on simulation feedback signals that are unavailable for social gestures. Supervised approaches can learn social behaviours from motion capture data but yield agents with limited flexibility and generalisation.

This thesis presents RLAnimate, a model-based, data-driven RL framework for character animation that enables a single agent to …

Traffic Prediction For Research And Education Networks: Anomaly-Aware Deep Learning And Benchmarking, Mohammad Arafath Uddin Shariff

School of Computing: Dissertations, Theses, and Student Research

Research and Education Networks (RENs) and High-Performance Computing (HPC) environments are critical infrastructures for modern scientific discovery, demanding sustained high-throughput and low-latency data transfers. Unlike commercial networks, RENs exhibit unique traffic characteristics, including predominant “elephant flows,” inherent burstiness, and complex temporal-spatial dynamics often decoupled from human-driven cycles. Traditional traffic forecasting methods, tailored for commercial Wide Area Networks (WANs), consistently fail to capture these distinct REN dynamics, leading to inefficient resource management and potential impediments to scientific progress.

This thesis addresses this critical gap by developing and validating a robust, scalable, and anomaly-aware traffic forecasting framework specifically tailored for REN/HPC networks. …

Real-Time Fiducial Marker Based Localization For Autonomous Unmanned Aerial Vehicle Navigation, Sourav Raxit

LSU New Orleans Theses and Dissertations

By harnessing fiducial markers as visual landmarks in the environment, Unmanned Aerial Vehicles (UAVs) can rapidly build precise maps and navigate spaces safely and efficiently, unlocking their potential for fluent collaboration and coexistence with humans. Existing fiducial marker methods rely on handcrafted feature extraction, which sacrifices accuracy. On the other hand, some deep learning pipelines for marker detection fail to meet real-time runtime constraints crucial for navigation applications. In this work, I propose YoloTag- a real-time fiducial marker-based localization system. YoloTag uses a lightweight YOLO v8 object detector to accurately detect fiducial markers in images while meeting the runtime constraints …

Enhancing Emotional Accuracy And Behavioral Novelty In Robot Behaviors: A Generative-Discriminative Approach, Rista Baral

Boise State University Theses and Dissertations

Recent advancements in language modeling have improved robotic emotion expressiveness, yet several challenges remain. Many existing robotic expression models rely on fixed rules and static frameworks, which limit their ability to capture the dynamic nature of emotional expression. Additionally, these systems often struggle to balance emotional accuracy with generating novel and varied behaviors. These limitations underscore the need for method capable of delivering both emotionally accurate and diverse robot behaviors.

In this thesis, we addresses these challenges by introducing a new framework for expressive behavior generation in robots. We develop a generative model that generates robot behavior sequences that align …

Computational Modeling For Automatic Superconducting Cavity Fault Prediction And Classification Using Time Series Signals, Md Monibor Rahman

Electrical & Computer Engineering Theses & Dissertations

Processing multivariate time series signals collected from sensor networks is challenging because of complex temporal dependencies and non-stationarity. With the advent of artificial intelligence (AI) like machine learning and deep learning, it has become possible to process sensor-driven time series data more effectively than traditional statistical methods.

This dissertation aims to develop machine learning and deep learning models to address machine fault diagnosis using multivariate time series signals collected from the Continuous Electron Beam Accelerator Facility (CEBAF) at Jefferson Lab. The first goal of the proposed work is to develop deep learning–based classification models and an unsupervised fault clustering approach …

Assessing The Robustness Of Test Selection Methods For Deep Neural Networks, Qiang Hu, Yuejun Guo, Xiaofei Xie, Maxime Cordy, Wei Ma, Mike Papadakis, Lei Ma, Yves Le Traon

Research Collection School Of Computing and Information Systems

Regularly testing deep learning-powered systems on newly collected data is critical to ensure their reliability, robustness, and efficacy in real-world applications. This process is demanding due to the significant time and human effort required for labeling new data. While test selection methods alleviate manual labor by labeling and evaluating only a subset of data while meeting testing criteria, we observe that such methods with reported promising results are simply evaluated, e.g., testing on original test data. The question arises: are they always reliable? In this article, we explore when and to what extent test selection methods fail. First, we identify …

Succinctness Meets Transparency A Linking Framework Combining Hyrax And Kzg, And Its Applications, Argha Sardar

Master’s Dissertations

The thesis begins by introducing the concept of zero knowledge and exploring its various paradigms. It then focuses on a interesting problem: the construction of linking proofs. Chap- ter 2 addresses the challenge of binding two distinct polynomial commitment schemes so that they are consistent at a common evaluation point. The chapter further introduces a method for equating two different polynomials with different domains using an affine line construction. By applying certain optimizations to the bulletproofs protocol, the work achieves a reduction in both the prover’s time and the number of rounds required for proving a large committed inner product. …

Multiple View Neural Regression Of A Facial Shape Model, Xiang Li

All Dissertations

Creating re-topologized 3D facial meshes is a critical step in high-quality facial animation pipelines, yet it remains a labor-intensive and time-consuming task. Traditional approaches typically rely on multiview stereo reconstruction and specialized photometric environments to acquire accurate geometric and reflectance data under controlled conditions. This dissertation presents work toward more efficient capture of production-ready meshes including (1) developmental aspects of VarIS, a custom-designed light sphere capable of capturing high-resolution stereo geometry and reflectance maps—including diffuse, specular, and normal components under programmable illumination; (2) a study of the effects of camera parameters on automatic 2D and 3D landmarking methods, (3) methods …

Human Comfort Modeling, Measurement, And Improvement In Human–Robot Collaboration, Yuchen Yan

All Dissertations

A dissertation is proposed to explore human comfort in human-robot collaboration (HRC) through modeling, prediction, and enhancement methodologies. Human comfort is a crucial yet underexplored factor in HRC, directly influencing task efficiency, trust, and overall collaboration effectiveness. Understanding the influential factors, developing computational models, and refining methods to improve human comfort in HRC are essential steps toward advancing the field of collaborative robotics. To address these challenges, multiple studies have been conducted. A series of experimental studies were performed to investigate how robot motion-based parameters affect human comfort in HRC. These studies examined both analytical comfort modeling approaches and physiological …

Input Structure Based Optimization For Privacy Preserving Ai Systems, Feng Yizhou

Electrical & Computer Engineering Theses & Dissertations

As Artificial Intelligence (AI) systems become increasingly integrated into critical domains, ensuring privacy-preserving model design and system deployment has become a pressing priority. Safeguarding both sensitive user data and proprietary model parameters is critical throughout the AI model and system, from data acquisition and pre-processing to model inference and deployment. However, existing privacy-preserving frameworks face several limitations, including fragmented data ownership, incomplete protection across system stages, substantial computational overhead, and poor scalability to modern architectures such as large language models. This dissertation explores a unifying optimization strategy centered on input structure design to address these challenges. The core idea is …

Human Activity Recognition And Identification Driven Automated Deep Learning For Time-Series Classification, Justin Alan Gamble

Engineering Management & Systems Engineering Theses & Dissertations

The growing emphasis on Digital Engineering (DE) within the U.S. Department of Defense (DoD) demands advanced methods for leveraging vast time-series data generated by sensor-rich environments. Deep learning models offer promising solutions for complex timeseries classification tasks, however their design and optimization remain highly resource intensive, requiring specialized expertise. This dissertation addresses this challenge by developing and evaluating an Automated Machine Learning (AutoML) framework specifically tailored for the time-series classification task of Human Activity Recognition and Identification (HARI).

A systematic investigation was conducted using the Design Science Research Methodology (DSRM) comparing traditional search strategies of grid search and random search …

Machine Learning Based Medical Ultrasound Image Classification And Grad-Cam Interpretation, Victoria C. Hemphill

All Theses

This work takes a step in creating a diagnostic tool for the classification decision process of Achilles tendinopathy using ultrasound images. An attention-based multiple instance learning model is developed to classify the images. Typically, doctors capture multiple ultrasound images of the Achilles tendon during a study to determine a complete diagnosis. Multiple instance models adopt this behavior by providing a single label for a set of instances (images). The images are grouped into ”bags” at the study level and passed into the model. The MIL model then uses its attention property to assign an importance score to each image to …

How Developers Use Type-System Related Programming Language Features, Samuel W. Flint

School of Computing: Dissertations, Theses, and Student Research

Optional type annotations are a popular feature of programming languages that allow developers to omit explicit type information in code while, in some cases, retaining many of the benefits of static typing, such as in-code documentation, improved detection of type errors, or enforcement of code properties. However, how developers use and understand optional type annotations is not clear. The focus of this dissertation is to understand the use and comprehension of optional type annotations.

Optional type annotations are examined through four lenses: first, by examining the evolution of usage in a statically typed programming language (Kotlin, the default language for …

Low-Level Memory Attacks On Edge Assisted Robotic Applications, William Arnold

Master of Engineering Theses

This thesis investigates how low-level memory faults can undermine edge-assisted robotic systems that rely on memory optimization. As robots are utilized in real world applications, the ability to operate safely and successfully in mission critical deployment becomes important. To help achieve these goals, developers are increasingly starting to place computation nodes at network edges to meet latency and reliability requirements. Edge nodes, however, are resource-constrained and resources conservation techniques such as Kernel Same-page Merging (KSM) are enabled to deduplicate identical pages across processes or virtual machines. This thesis shows that this optimization technique quietly widens the attack surface and can …

Advancing Real-World Implementation Of The Well Optimized Linear Finder (Wolf) High-Speed Atmospheric Turbulence Compensation Method, Timothy Evan Coon

Theses and Dissertations

This dissertation advances the real-world implementation of the Well Optimized Linear Finder (WOLF) method for high-speed Atmospheric Turbulence Compensation (ATC). Atmospheric turbulence introduces phase aberrations into optical wavefronts and degrades image quality in terrestrial imaging systems. Traditional phase diversity methods are computationally intensive and poorly suited to real-time operation. The WOLF method addresses these limitations through a novel, point-wise formulation of the optical transfer function (OTF) as a structured autocorrelation of the generalized pupil function (GPF). This formulation enables the estimation of phase aberrations at individual spatial coordinates with distributed computational complexity.

The research begins by developing a MATLAB-based simulation …

Retracted: Dynamics And Stability Analysis Of 8-Dimensional Hyperchaotic Systems: Study Of Lyapunov Exponents, Abdulsattar Abdullah Hamad, Nida Muhsin Ali, Muayyad Mahmood Khalil

Iraqi Journal for Computer Science and Mathematics

This research explores the complex dynamics of an 8D hyperchaotic system, focusing on its trajectory stability and behavior under various control parameters. By using numerical simulations, we investigate the relationship between the Lyapunov components and the stability of the system. It provides a quantitative measure of the chaos within the model of the matrix, whose derivation consists of the system's sensitivity to perturbation, simulating chaotic systems in high dimensions faces challenges such as high computational resource demands. Difficulty in ensuring numerical convergence and stability. The results highlight the profound impact of control parameters on the dynamic behavior of hyperchaotic systems. …

Corneal Elevation Maps Patterns Classification Using Correlation Method, Sura M. Ahmed, Nebras H. Ghaeb, Salman Yussof, Noor T. Al-Sharify, Husam Yahya Nser, Zainab T. Al-Sharify, Ong Hang See, Leong Yeng Weng

Iraqi Journal for Computer Science and Mathematics

The ophthalmologist uses various techniques to diagnose corneal abnormalities, including corneal topography and tomography devices. Currently generated color corneal elevation surface maps from topographic imaging devices are essential for detecting ocular diseases, while accurately classifying these maps to differentiate between different shapes remains an issue. This study aims to assess and compare parameters of the front and back corneal surface elevation map patterns of normal/abnormal corneas. Two hundred cases were randomly taken (100 normal and 100 abnormal) with a single normal reference image, and then an additional 25 cases were added later for the optimization process. The preprocessing of all …

Retracted: Comparative Study Based On Continuous Analysis Of Autism Spectrum Disorder Using Advanced Deep Learning With Model Interpretability Insights, Ayan Sar, Hussain Falih Mahdi, Sumit Aich, Pranav Singh, Tanupriya Choudhury

Iraqi Journal for Computer Science and Mathematics

Hysterical conversion has similar cognition and behaviours to those in the case of ASD; it is, therefore, complex when diagnosing and classifying the condition. The majority of employed diagnostic tests are cross-sectional and fail to describe the developmental and clinical features of ASD; for this reason, they are pretty inaccurate in the diagnosis of ASD and thus cause disparities in the efficiency of the therapeutic interventions used. The present study's research contribution is a new application of deep learning that aims to analyse the spectrum of ASD with gradient-based classifications. In this case, we use a DL model trained on …