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Limits Of Temperature Tolerance Of Leishmania Enriettii And Leishmania Hertigi In A Real-Time Pcr Assay, Christina Salinas

Theses & Dissertations

Protozoans of the genus Leishmania are intracellular parasites found across five continents. They cycle between a promastigote form inside the digestive tracts of blood-feeding female sand flies and an amastigote form within mammalian host macrophages. Temperature is an important factor that must be defeated in order for the parasites' survival and continuance. This paper studies the limits of temperature tolerance by Leishmania enriettii and Leishmania hertigi. It was hypothesized that a correlation would exist between the limits of temperature tolerance to body temperature of their host. I explored growth characteristics at 21,27,29, 33, 35, 37, and 39° C. It was …

Select Listeria Monocytogenes Subtypes Commonly Found In Foods Carry Distinct Nonsense Mutations In Inla, Leading To Expression Of Truncated And Secreted Internalin A, And Are Associated With A Reduced Invasion Phenotype For Human Intestinal Epithelial Cells, K. K. Nightingale, K. Windham, K. E. Martin, M. Yeung, M. Wiedmann

Biological Sciences

The surface protein internalin A (InlA) contributes to the invasion of human intestinal epithelial cells by Listeria monocytogenes. Screening of L. monocytogenes strains isolated from human clinical cases (n=46), foods (n=118), and healthy animals (n=58) in the United States revealed mutations in inlA leading to premature stop codons (PMSCs) in L. monocytogenes ribotypes DUP-1052A and DUP-16635A (PMSC mutation type 1), DUP-1025A and DUP-1031A (PMSC mutation type 2), and DUP-1046B and DUP-1062A (PMSC mutation type 3). While all DUP-1046B, DUP-1062A, DUP-16635A, and DUP-1031A isolates (n=76) contained inlA PMSCs, ribotypes DUP-1052A and DUP-1025A ( …

[Accepted Article Manuscript Version (Postprint)] Identification And Functional Characterization Of Arabidopsis Peroxin4 And The Interacting Protein Peroxin22, Bethany Zolman, Melanie Monroe-Augustus, Illeana Silva, Bonnie Bartel

Biology Department Faculty Works

Peroxins are genetically defined as proteins necessary for peroxisome biogenesis. By screening for reduced response to indole-3-butyric acid, which is metabolized to active auxin in peroxisomes, we isolated an Arabidopsis thaliana peroxin4 (pex4) mutant. This mutant displays sucrose-dependent seedling development and reduced lateral root production, characteristics of plant peroxisome malfunction. We used yeast two-hybrid analysis to determine that PEX4, an apparent ubiquitinconjugating enzyme, interacts with a previously unidentified Arabidopsis protein, PEX22. A pex4 pex22 double mutant enhanced pex4 defects, confirming that PEX22 is a peroxin. Expression of both Arabidopsis genes together complemented yeast pex4 or pex22 mutant defects, whereas expression …

Bartonella Bacilliformis Groel: Effect On Growth Of Human Vascular Endothelial Cells In Infected Cocultures, Laura S. Smitherman, Michael F. Minnick

Biological Sciences Faculty Publications

Bartonella are the only bacteria known to induce angioproliferative lesions of the human vasculature and liver during infection. Previous work from our lab suggests that GroEL participates in the mitogenic response observed in HUVEC cultures supplemented with the soluble fraction of Bartonella bacilliformis. Work in this study shows that exposure to high concentrations of the fraction is actually cytotoxic for HUVECs. To analyze this phenomenon, live B. bacilliformis-HUVEC cocultures were employed to study the effect of excess bacterial GroEL on the host cell during active infection. Four B. bacilliformis strains were generated to produce varying levels of GroEL. HUVEC cocultures …

Aquatic Animal Health Subprogram: Technical Guidelines For The Translocation Of Live Aquatic Animals - With Reference To Barramundi Nodavirus, Brian Jones

Fisheries Research Reports

FRDC Project No. 2005/640

A workshop was conducted involving input from most jurisdictions. Technical issues including hazard identification and risk management associated with the translocation of live finfish were documented.

A series of recommendations, which resulted from the workshop process, will be progressed through the National Aquatic Animal Health Technical Working group and the Aquatic Animal Health Committee.

The Eggshell Structures Of Ringed Turtle - Doves (Streptopelia Risoria), Natalie Ellen Hubbard

Biology Theses - Archive

The avian egg provides nutrients and protects the growing embryo from physical and microbial harm. Structures fundamental to the protection are the membrane layers, which are tightly meshed networks of collagen fibers, and the eggshell, which is composed of calcite crystals, (CaC03). The eggs of Ringed Turtle-Dove and commercially bred chickens were selected for the study. Eggs of commercially bred chickens are twice in length and width of the dove eggs. Features analyzed are components of quality and strength of eggshells included shell thickness, membrane thickness, and concentration and size of vesicles. A comparative study of the bird eggs was …

Reproductive Behaviors Of Two Congeneric, Sympatric Jumping Spiders: Gene Flow Barriers And Polyandry, Stacey Nicole Gingras

Biology Theses - Archive

This two part study compares aspects of jumping spider reproductive behavior and their implications 1) as gene flow barriers during the process of speciation and 2) in the occurrence of polyandry. Courtship behaviors of Phidippus audax and P. carolinensis were observed. P. carolinensis displays simple courtship behavior when compared to the visually complex behavior of P. audax. P. carolinensis males appear to be incorporating a vibratory element into their courtship display, and a possible stridulatory organ, located on the male pedipalp, is described. Large differences in courtship display, complexity of courtship badges, and phenologies between the species most likely prevent …

Study Of The Expression Pattern Of A Possible Pseudogene And A Functional Retrogene In Drosophila, Aditi Bhardwaj

Biology Theses - Archive

Gene duplication occurs when a mutation leads to the copying of a region of DNA that contains a functional gene. After duplication, there will be two copies of the gene in the genome. Gene duplication can have deleterious effects but it can also be the source of novelty. It has been acknowledged for a long time that selection may be relaxed for one copy rendering that locus free to mutate and discover new functions. Another of the fates of duplication of special notice is the formation of a pseudogene. Pseudogenes have been defined as nonfunctional sequences of genomic DNA originally …

Sal-Site: Integrating New And Existing Ambystomatid Salamander Research And Informational Resources, Jeramiah J. Smith, Srikrishna Putta, John A. Walker, D. Kevin Kump, Amy K. Samuels, James R. Monaghan, David W. Weisrock, Chuck Staben, S. Randal Voss

Biology Faculty Publications

Salamanders of the genus Ambystoma are a unique model organism system because they enable natural history and biomedical research in the laboratory or field. We developed Sal-Site to integrate new and existing ambystomatid salamander research resources in support of this model system. Sal-Site hosts six important resources: 1) Salamander Genome Project: an information-based web-site describing progress in genome resource development, 2) Ambystoma EST Database: a database of manually edited and analyzed contigs assembled from ESTs that were collected from A. tigrinum tigrinum and A. mexicanum, 3) Ambystoma Gene Collection: a database containing full-length protein-coding sequences, 4) Ambystoma Map and Marker …

Smooth Muscle Adherens Junctions Associated Proteins Are Stable At The Cell Periphery During Relaxation And Activation, Thomas J. Eddinger, Jessen D. Schiebout, Darl R. Swartz

Biological Sciences Faculty Research and Publications

This study was performed to determine the stability of the adherens junction (AJ)-associated proteins at the smooth muscle cell (SMC) plasma membrane during relaxing and activating conditions. Dog stomach, ileum, colon, and trachea tissues were stored in Ca²⁺-free PSS or regular PSS or were activated in 10 μM carbachol in PSS before rapid freezing. The tissues were subsequently sectioned and immunoreacted using antibodies for vinculin, talin, fibronectin, and caveolin to determine their cellular distribution in these tissues under these conditions. In all four tissues and under all three conditions, the distribution of these four proteins remained localized to …

Disentangling Above‐ And Below‐Ground Competition Between Lianas And Trees In A Tropical Forest, Stefan A. Schnitzer, Mirjam E. Kuzee, Frans Bongers

Biological Sciences Faculty Research and Publications

1. Light is thought to be the most limiting resource in tropical forests, and thus above‐ground competition is commonly accepted as the mechanism that structures these communities. In many tropical forests, trees compete not only with other trees, but also with lianas, which compete aggressively for below‐ground resources and thus may limit tree growth and regeneration.
2. Using a replicated experiment, we tested the relative strengths of above‐ and below‐ground competition from lianas on tree saplings in a disturbed forest in Côte d’Ivoire with a heterogeneous canopy and relatively high light penetration. We planted seedlings of three tree species and subjected them …

Avian Hosts For West Nile Virus In St. Tammany Parish, Louisiana, 2002, Nicholas Komar, Nicholas A. Panella, Stanley A. Langevin, Aaron C. Brault, Manuel Amador, Eric Edwards, Jennifer C. Owen

Faculty Publications

West Nile virus (WNV) infections in free-ranging birds were studied in Slidell, St. Tammany Parish, Louisiana, after a human encephalitis outbreak peaked there in July 2002. Seroprevalence in resident, free-ranging wild birds in one suburban site was 25% and 24% in August and October, respectively, indicating that most transmission had ceased by early August. Mortality rates, seroprevalence rates, host competence, and crude population estimates were used in mathematical models to predict actual infection rates, population impacts, and importance as amplifying hosts for several common passerine birds. Northern cardinal (Cardinalis cardinalis) and house sparrow (Passer domesticus) were the principal amplifying hosts, …

Climatic Unpredictability And Parasitism Of Caterpillars: Implications Of Global Warming, John Stireman, Lee Dyer, D. Janzen, M. Singer, J. Lill, R. Marquis, R. Ricklefs, G. Gentry, W. Hallwachs, P. Coley, J. Barone, H. Greeney, H. Connahs, P. Barbosa, H. Morais, I. Diniz

Biology Department Faculty Works

Insect outbreaks are expected to increase in frequency and intensity with projected changes in global climate through direct effects of climate change on insect populations and through disruption of community interactions. Although there is much concern about mean changes in global climate, the impact of climatic variability itself on species interactions has been little explored. Here, we compare caterpillar–parasitoid interactions across a broad gradient of climatic variability and find that the combined data in 15 geographically dispersed databases show a decrease in levels of parasitism as climatic variability increases. The dominant contribution to this pattern by relatively specialized parasitoid wasps …

Applications Of Phylogenetics To Issues In Freshwater Crayfish Biology, Keith A. Crandall

Faculty Publications

Freshwater crayfish have served as model organisms for over 125 years in scientific research, from areas such as neurobiology and vision research to conservation biology and evolution. Recently, evolutionary histories in the form of phylogenies have served as a critical foundation for testing hypotheses in such diverse research areas as well. In this article, I review the amazing diversity of freshwater crayfish, especially in a phylogenetic context and explore how these evolutionary histories have informed crayfish biology and can be used powerfully in the future to guide research in a diversity of areas. Throughout the article, I draw on examples …

Hybridization Of Lythrurus Fasciolaris (Cope) And Lythrurus Umbratilis (Girard) (Cypriniformes: Cyprinidae) In The Ohio River Basin, Robert L. Hopkins Ii

Morehead State Theses and Dissertations

A thesis presented to the faculty of the College of Science and Technology at Morehead State University in partial fulfillment of the requirements for the Degree of Master of Science by Robert L. Hopkins, II on November 14, 2005.

The Depressive Effect Of PI On The Force-Pca Relationship In Skinned Single Muscle Fibers Is Temperature Dependent, Edward Patrick Debold, Janell Romatowski, Robert H. Fitts

Biological Sciences Faculty Research and Publications

Increases in P_i combined with decreases in myoplasmic Ca2+ are believed to cause a significant portion of the decrease in muscular force during fatigue. To investigate this further, we determined the effect of 30 mM P_ion the force-Ca²⁺ relationship of chemically skinned single muscle fibers at near-physiological temperature (30°C). Fibers isolated from rat soleus (slow) and gastrocnemius (fast) muscle were subjected to a series of solutions with an increasing free Ca²⁺ concentration in the presence and absence of 30 mM P_iat both low (15°C) and high (30°C) temperature. In slow fibers, 30 mM …

Ego-1, A Putative Rna-Dependent Rna Polymerase, Is Required For Heterochromatin Assembly On Unpaired Dna During C. Elegans Meiosis, Eleanor M. Maine, Jessica Hauth, Thomas Ratliff, Valarie E. Vought, Xingyu She, William G. Kelly

Biology - All Scholarship

During meiosis in C. elegans, unpaired chromosomes and chromosomal regions accumulate high levels of histone H3 lysine 9 dimethylation (H3K9me2), a modification associated with facultative heterochromatin assembly and the resulting transcriptional silencing [1, 2]. Meiotic silencing of unpaired DNA may be a widely conserved genome defense mechanism [3–5]. The mechanisms of meiotic silencing remain unclear, although both transcriptional and posttranscriptional processes are implicated [3–5]. Cellular RNA-dependent RNA polymerases (RdRPs) function in development and RNA-mediated silencing in many species [3, 6, 7] and in heterochromatin assembly in S. pombe [3, 8]. There are four C. elegans RdRPs, including two with known …

Plumage Convergence In Picoides Woodpeckers Based On A Molecular Phylogeny, With Emphasis On Convergence In Downy And Hairy Woodpeckers, Amy C. Weibel, William S. Moore

Biological Sciences Faculty Research Publications

Adult and juvenile plumage characters were traced onto a well-resolved molecular based phylogeny for Picoides woodpeckers, and a simple phylogenetic test of homology, parallelism, and convergence of plumage characters was performed. Reconstruction of ancestral character states revealed multiple events of independent evolution of derived character states in most characters studied, and a concentrated changes test revealed that some plumage characters evolved in association with habitat type. For example, there was a statistically significant association between loss of dorsal barring and use of densely vegetated habitats among Picoides species. Two analyses indicated that convergence, as opposed to parallel evolution or shared …

Flexible Social Structure Of A Desert Rodent, Rhombomys Opimus: Philopatry, Kinship, And Ecological Constraints, Jan Randall, Konstantin Rogovin, Patricia Parker, John Eimes

Biology Department Faculty Works

We tested hypotheses based on philopatry, kinship, and ecological constraints to explain sociality in a semifossorial desert rodent, the great gerbil, Rhombomys opimus. Data were collected in the field in Uzbekistan in the spring and fall of 1996 and 1998–2004. Population densities fluctuated dramatically with high turnover in both males and females to reveal that dispersal and social structure were density dependent. Fewer gerbils dispersed at higher densities and members of family groups dispersed together. A majority of females lived in groups at high densities, but as population densities declined, proportionally more females were solitary. DNA analysis revealed that group-living …

Bateman Gradients In Field And Laboratory Studies: A Cautionary Tale, Patricia Parker, Zuleyma Tang-Martinez

Biology Department Faculty Works

Since tools of molecular genetics became readily available, our understanding of bird mating systems has undergone a revolution. The majority of passerine species investigated are socially monogamous, but have been shown to be genetically polygamous. Data sets from natural populations of juncos suggest that multiple mating by females results in a sexual selection gradient as steep for females as for males (a result that does not support Bateman's predictions). However, in males, fitness is enhanced directly through fertilization success with multiple matings; in females fitness benefits may be enhanced immediately through direct access to food, protection against predators, or other …

The Role Of Cuticular Pheromones In Courtship Conditioning Of Drosophila Males, Kathleen King Siwicki, Paul Nicholas Riccio , '05, Lisa Ladewski , '02, F. Marcillac, L. Dartevelle, Stephanie Alexis Cross , '04, J.-F. Ferveur

Biology Faculty Works

Courtship conditioning is an associative learning paradigm in Drosophila melanogaster, wherein male courtship behavior is modified by experience with unreceptive, previously mated females. While the training experience with mated females involves multiple sensory and behavioral interactions, we hypothesized that female cuticular hydrocarbons function as a specific chemosensory conditioned stimulus in this learning paradigm. The effects of training with mated females were determined in courtship tests with either wild-type virgin females as courtship targets, or with target flies of different genotypes that express distinct Cuticular hydrocarbon (CH) profiles. Results of tests with female targets that lacked the normal CH profile, and …

Invertebrate & Leaf Litter Dynamics In The Depauw University Nature Park And Arboretum, Karl Koehler, Libby Sue Allard, Kyra Dawn Reed

Annual Student Research Poster Session

Our study focuses on the interaction between invertebrate abundance and the decomposition of leaf litter. The decomposition of leaf litter plays a major role in the nutrient cycling process, which is critical to the health of an ecosystem (Spurr and Barnes 1980). The dynamics between invertebrates and leaf litter are of particular importance because invertebrates are good indicators of the activity of the decomposer community. Abiotic factors such as soil pH and temperature are also important influences on decomposition rates (Bornebusch 1930; Petersen & Luxton 1982; Seastedt 1984). Our goal was to determine the nature of this interaction. Ultimately, this …

Invertebrate And Leaf Litter Dynamics In The Depauw Nature Park, Karl Koehler, Vanessa Artman

Student Research

Our study focuses on the interaction between invertebrate abundance and the decomposition of leaf litter. The decomposition of leaf litter plays a major role in the nutrient cycling process, which is critical to the health of an ecosystem (Spurr and Barnes 1980). The dynamics between invertebrates and leaf litter are of particular importance because invertebrates are good indicators of the activity of the decomposer community. Abiotic factors such as soil pH and temperature are also important influences on decomposition rates (Petersen and Luxton 1982, Seastedt 1984). Our goal was to determine the nature of this interaction. Ultimately, this information could …

Modulation Of Tyramine Signaling By Osmolality In An Insect Secretory Epithelium, Edward M. Blumenthal

Biological Sciences Faculty Research and Publications

The control of water balance in multicellular organisms depends on absorptive and secretory processes across epithelia. This study concerns the effects of osmolality on the function of the Malpighian tubules (MTs), a major component of the insect excretory system. Previous work has shown that the biogenic amine tyramine increases transepithelial chloride conductance and urine secretion in Drosophila MTs. This study demonstrates that the response of MTs to tyramine, as measured by the depolarization of the transepithelial potential (TEP), is modulated by the osmolality of the surrounding medium. An increase in osmolality caused decreased tyramine sensitivity, whereas a decrease in osmolality …

Empirical Analysis Of The Str Profiles Resulting From Conceptual Mixtures, David R. Paoletti, Travis E. Doom, Carissa M. Krane, Michael L. Raymer, Dan E. Krane

Biology Faculty Publications

Samples containing DNA from two or more individuals can be difficult to interpret. Even ascertaining the number of contributors can be challenging and associated uncertainties can have dramatic effects on the interpretation of testing results. Using an FBI genotypes dataset, containing complete genotype information from the 13 Combined DNA Index System (CODIS) loci for 959 individuals, all possible mixtures of three individuals were exhaustively and empirically computed. Allele sharing between pairs of individuals in the original dataset, a randomized dataset and datasets of generated cousins and siblings was evaluated as were the number of loci that were necessary to reliably …

Contributions Of Heterosis And Epistasis To Hybrid Fitness, Mitchell B. Cruzan

Biology Faculty Publications and Presentations

Early-generation hybrid fitness is difficult to interpret because heterosis can obscure the effects of hybrid breakdown. We used controlled reciprocal crosses and common garden experiments to distinguish between effects of heterosis and nuclear and cytonuclear epistasis among morphotypes and advanced-generation hybrid derivative populations in the Piriqueta caroliniana (Turneraceae) plant complex. Seed germination, growth, and sexual reproduction of first-generation hybrids, inbred parental lines, and outbred parental lines were compared under field conditions. Average vegetative performance was greater for hybrids than for inbred lines, and firstseason growth was similar for hybrids and outbred parental lines. Hybrid survival surpassed that of inbred lines …

Rapid Senescence In Pacific Salmon, Yolanda E. Morbey, Chad Brassil, Andrew P. Hendry

School of Biological Sciences: Faculty Publications

Any useful evolutionary theory of senescence must be able to explain variation within and among natural populations and species. This requires a careful characterization of age-specific mortality rates in nature as well as the intrinsic and extrinsic factors that influence these rates. We perform this task for two populations of semelparous Pacific salmon. During the breeding season, estimated daily mortality rates increased from 0 to 0.2–0.5 (depending on the year) over the course of several weeks. Early-arriving individuals had a later onset and/or a lower rate of senescence in each breeding season, consistent with adaptive expectations based on temporal variation …

Fish Species And Size Distribution And Abundance In Different Areas In Lake Victoria, Tanzania, A I Chande, H A Mhitu

Tanzania Journal of Science

The study was carried out to investigate fish species distribution and abundance in different areas and size structure variations according to depth in Lake Victoria, Tanzania. Data were collected using a bottom trawl net during rainy and dry seasons in 2002. The results show that there were significant differences in catch rates between rainy and dry seasons (F (12, 12) = 2.69; p < 0.05). The rainy season recorded higher catch rates (36.25 - 106.61 kg/hr) than during the dry season (14.30 - 67.90 kg/hr). The haplochromines catch rates were higher during the dry season (11.08 kg/hr) than during the rainy season (7.72 kg/hr), however, the differences were not significant (c2 = 0.60, df = 1, p > 0.05). The distribution of the fish species in different areas recorded a significant difference during the dry season (Q = 18.254, df = 8, P < 0.001), while during the rainy season the difference was not significant (Q = 10.667, df = 8, P > 0.001). Moreover, the results show that small individuals dominated in shallow waters …

Comparative Analysis Of Mercury Content In Human Hair And Cosmetic Products Used In Dar Es Salaam, Tanzania, C P Kinabo

Tanzania Journal of Science

Total mercury (T-Hg) concentrations were analysed in human hairs and cosmetic products sold in Dar es Salaam Tanzania. The average total mercury (T-Hg) concentrations in the scalp hair of females using mercury based cosmetic creams and soaps ranged from 7.0 ± 0.4 to 880 ± 12 ppm. Highest T-Hg concentrations were found in females who work in beauty hair salons and the lowest concentrations were found among students. The average values in non-cosmetic users were found to be lower, with mercury ranging from 0.57 ± 0.07 to 8.29 ± 1.22 ppm. Analysis of cosmetic products indicated high values, ranging from …

Carotenoid Availability Affects The Development Of A Colour-Based Mate Preference And The Sensory Bias To Which It Is Genetically Linked, Gregory F. Grether, Gita R. Kolluru, F. Helen Rodd, Jennifer De La Cerda, Kaori Shimazaki

Biological Sciences

Regardless of their origins, mate preferences should, in theory, be shaped by their benefits in a mating context. Here we show that the female preference for carotenoid colouration in guppies (Poecilia reticulata) exhibits a phenotypically plastic response to carotenoid availability, confirming a key prediction of sexual selection theory. Earlier work indicated that this mate preference is genetically linked to, and may be derived from, a sensory bias that occurs in both sexes: attraction to orange objects. The original function of this sensory bias is unknown, but it may help guppies find orange-coloured fruits in the rainforest streams of …