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Tumor Suppressor Activity Of Odc Antizyme In Mek-Driven Skin Tumorigenesis, David J. Feith, Sofia Origanti, Paula L. Shoop, Suzanne Sass-Kuhn, Lisa M. Shantz

Biological Sciences Faculty Research and Publications

To test the hypothesis that suppression of ornithine decarboxylase (ODC) activity blocks the promotion of target cells in the outer root sheath of the hair follicle initiated by Raf/MEK/ERK activation, we crossed mice overexpressing an activated MEK mutant in the skin (K14-MEK mice) with two transgenic lines overexpressing antizyme (AZ), which binds to ODC and targets it for degradation. K14-MEK mice develop spontaneous skin tumors without initiation or promotion. These mice on the ICR background were crossed with K5-AZ and K6-AZ mice on both the carcinogenesis-resistant C57BL/6 background and the sensitive DBA/2 background. Expression of AZ driven by either the …

Somatostatin Regulates The Extracellular Regulated Kinase Cascade Of Human Rheumatoid Arthritis Synoviocytes, Frances Mae West

Seton Hall University Dissertations and Theses (ETDs)

Somatostatin (SRIF, somatotropin release inhibitory factor) is a ubiquitously expressed neuropeptide, interacting with cells via five SRIF receptor subtypes (sst.-sst.), belonging to the guanine nucleotide binding protein-coupled receptor (GPCR) superfamily. SRIF receptors have been well documented for their ability to inhibit cell proliferation and secretion in a variety of animal tissues. Over the past l S years, pre-clinical and clinical studies implicate that SRIF and SRIF analog therapy improve symptoms in patients suffering from rheumatoid arthritis (RA). In this study, we investigate SRIF's effects on intracellular signaling in the synovium, the cellular layer that lines synovial joints, using in vitro …

Rapid Assimilation Of Yolk Enhances Growth And Development Of Lizard Embryos From A Cold Environment, Melissa Ann Blake

All-Inclusive List of Electronic Theses and Dissertations

Selection for rapid growth in cold environments results in a geographic pattern known as countergradient variation. The eastern fence lizard, Sceloporus undulatus, exhibits countergradient variation in growth rate across latitudinal clines. In a common-garden experiment, S. undulatus embryos from cold environments grew more efficiently than embryos warm environments, even when the energetic contents of eggs were equalized. To examine the physiological mechanisms of higher growth efficiency, I measured the energetics of embryos during the first 49 days of incubation. Specifically, I recorded body mass, residual yolk, total respiration, and developmental stage for embyos from two populations (Virginia and South Carolina). …

Moments Of Truth In Genetic Medicine, Michael Dietrich

Dartmouth Scholarship

Review of Moments of Truth in Genetic Medicine by Susan Lindee, 2005.

Dolomedes Scriptus (Water Spider): Male Response To Females’ Putative Pheromones On Perches., Katherine Hunt

Undergraduate Theses and Capstone Projects

Sexual signals are commonly used among animals to enhance reproductive success. Chemical signals such as pheromones are commonly used to attract mates. Little is known, though, about how these signals are received or interpreted by the target. I studied the water spider, Dolomedes scriptus in the pisaurid family. Most Dolomedes species only make webs as a nursery for their young. However, females often create silk drag lines, potentially serving for species recognition. In some Dolomedes species, females who are previously mated are known to cannibalize most approaching males. Males might avoid cannibalism by avoiding mated females, particularly if they can …

Simple Methods For Estimating Outflow Salinity From Inflow And Reservoir Storage, Koji Inosako, Fasong Yuan, S. Miyamoto

Biological, Geological, and Environmental Faculty Publications

Reservoir storage reduces fluctuation in streamflow salinity, as inflow blends with stored water. This process is directly relevant to reservoir management, yet the methods for predicting outflow salinity from inflow and storage data are not adequately addressed. This study examined three simple methods for estimating outflow salinity on a monthly time step. The first method applies when inflow approximately equals outflow. The second method is applicable to changing reservoir storage. The third method utilizes a two-layer model in which evaporative concentration is assumed to occur in the top layer. The third method requires the full account of the water balance, …

A Subset Of Mer1p-Dependent Introns Requires Bud13p For Splicing Activation And Nuclear Retention, Marc Spingola, Frederick Scherrer

Biology Department Faculty Works

In the yeast Saccharomyces cerevisiae, Mer1p is expressed only during meiosis, and its expression is linked to the splicing of at least three mRNAs: MER2, MER3, and AMA1. Previous evidence suggests that Mer1p activates splicing by directly recruiting snRNPs or stabilizing intermediate splicing complexes formed on pre-mRNA that contains an intronic Mer1p enhancer element. However, some splicing factors, especially accessory/non-snRNP factors, have critical roles in retaining unspliced pre-mRNAs in the nucleus. We tested if Mer1p may indirectly regulate splicing by preventing the export of pre-mRNAs to the cytoplasm and also demonstrated that a second subunit of the Retention and Splicing …

2nd Annual Undergraduate Research Conference Abstract Book, University Of Missouri--Rolla

Undergraduate Research Conference at Missouri S&T

No abstract provided.

A Determination Of Phylogeny And Hybridization History Within Clematis L. (Ranunculaceae) Using Actin And Nitrate Reductase Intron Sequences, Kimberly Fearn Do

USF Tampa Graduate Theses and Dissertations

The phylogeny of Clematis, section Viorna, was characterized in this study using molecular data. Two nuclear introns were sequenced for a variety of taxa: actin and nitrate reductase. Actin intron sequence data yielded very little phylogenetic information. Some basal clades were resolved, but there were very few well supported relationships between species of the Viorna section in both the neighbor joining and maximum parsimony analyses. Nitrate reductase intron sequence data was slightly more variable. The number of well supported relationships in both the neighbor joining and maximum parsimony analyses for nitrate reductase was greater, but still not sufficient …

Mechanism Of Enhanced Activity Of Liposome-Entrapped Aminoglycosides Against Resistant Strains Of Pseudomonas Aeruginosa, Clement Mugabe, Majed Halwani, Ali Azghani, Robert M. Lafrenie, Abdelwahab Omri

Biology Faculty Publications and Presentations

Pseudomonas aeruginosa is inherently resistant to most conventional antibiotics. The mechanism of resistance of this bacterium is mainly associated with the low permeability of its outer membrane to these agents. We sought to assess the bactericidal efficacy of liposome-entrapped aminoglycosides against resistant clinical strains of P. aeruginosa and to define the mechanism of liposome-bacterium interactions. Aminoglycosides were incorporated into liposomes, and the bactericidal efficacies of both free and liposomal drugs were evaluated. To define the mechanism of liposome-bacterium interactions, transmission electron microscopy (TEM), flow cytometry, lipid mixing assay, and immunocytochemistry were employed. Encapsulation of aminoglycosides into liposomes significantly increased their …

Exogenous Expression Of Human Na, K-Atpase Isoforms In Insect Cells, Christal Renee' Carpenter

McCabe Thesis Collection

The Na-K-ATPase or Na pump is a membrane bound enzyme that maintains a high concentration of K+ and low concentration of Na+ in most animal cells. Three subunits constitute the Na pump, named alpha (ex), beta (~). and gamma (y). The ex subunit is responsible for the catalytic and transport of the enzyme, the ~ subunit is important for bringing the ex to the plasma membrane of the cell, and y is a regulatory subunit of the Na pump. In addition, there are several molecular variants or isoforms of the ex and ~ subunits. At present four different ex (ex …

Low Leaf N And P Resorption Contributes To Nutrient Limitation In Two Desert Shrubs, Rebecca E. Drenovsky, J. H. Richards

Biology

Both water and nutrients are limiting in arid environments, and desert plants have adapted to these limitations through numerous developmental and physiological mechanisms. In the Mono Basin, California, USA, co-dominant Sarcobatus vermiculatus and Chrysothamnus nauseosus ssp. consimilis are differentially N and P limited. We hypothesized that low leaf N resorption contributes to N-limitation in Sarcobatus and that low leaf P resorption contributes to P-limitation in Chrysothamnus. As predicted, Sarcobatus resorbed proportionally 1.7-fold less N than Chrysothamnus, but reduced leaf P in senescent leaves to lower levels than Chrysothamnus (8.0–10.8-fold lower based on leaf area or mass, respectively), consistent with N, …

Effectiveness Of Cane Toad Eradication Methods: Arakwal National Park, Matthew Miller

Independent Study Project (ISP) Collection

The cane toad (Bufo marinus) is a pest throughout Australia. Not only is it poisonous to native predators, it also consumes or out competes native fauna. It has only recently entered into Northern New South Wales where the site for this study is located, at Arakwal National Park. This study aims to discover the most effective method of cane toad eradication in the National Park.

Over the course of 18 days, three traps were set and rotated between 9 different sites. Traps were set at sunset and cleared at sunrise. The three traps used were; (1) Pitfall style trap by …

The Effects Of Carotenoid And Food Intake On Caudal Fin Regeneration In Male Guppies, Gita R. Kolluru, N. C. Ruiz, N. Del Cid, Eric Dunlop, Gregory F. Grether

Biological Sciences

The trade‐offs involved in allocating carotenoid pigments and food to healing and regrowing damaged caudal fin tissue v. other functions were examined in guppies Poecilia reticulata, a species in which females prefer males that display larger amounts of carotenoids in their skin. The guppies were derived from four natural populations in Trinidad that differed in resource availability but not predation intensity. Carotenoids, food and site of origin did not affect either absolute or relative fin regrowth, which suggested that fin regeneration in guppies was not constrained by carotenoid availability. It is possible that carotenoid intake influences fin regeneration in …

Expression Profiling And Local Adaptation Of Boechera Holboellii Populations For Water Use Efficiency Across A Naturally Occurring Water Stress Gradient, Charles A. Knight, Heiko Vogel, Juergen Kroymann, Alice Shumate, Hanneke Witsenboer, Thomas Mitchell-Olds

Biological Sciences

We studied the physiological basis of local adaptation to drought in Boechera holboellii, a perennial relative of Arabidopsis thaliana, and used cDNA–AFLPs to identify candidate genes showing differential expression in these populations. We compared two populations of B. holboellii from contrasting water environments in a reciprocal transplant experiment, as well as in a laboratory dry-down experiment. We continuously measured the water content of soils using time domain reflectometery (TDR). We compared populations for their water use efficiency (WUE), root/shoot ratios (R:S) and leaf mass per unit area (LMA) in the field and in the laboratory, and identified candidate …

Comparison Of The Ingestion And Digestion Rates Of Ochromonas Danica Grazing On Pseudomonas Fluorescens Of Varying Food Quality, Stephen Paul Shannon

Biology Dissertations - Archive

Flagellate prey selection appears to depend on morphological characteristics of prey such as cell size and motility, as well as on physiochemical characteristics such as digestibility and cell surface characteristics. Pseudomonas fluorescens was grown in chemostats at four dilution rates (0.03, 0.06, 0.10, 0.13 h-1) and three temperatures (14, 20, 28°C) to produce cells of varying morphological characteristics (cell size) and physiochemical characteristics or food quality (as determined by the C:N:P ratio). Heat-killed bacteria of a given food quality were prepared and used to grow the flagellate Ochromonas danica. Ingestion and digestion rates were determined using fluorescently labeled bacteria of …

The Origin Of Bubonic Plague, Alan L. Gillen, Frank Sherwin

Faculty Publications and Presentations

Although some forms of the bacterium Yersinia are harmless, other forms have devastated human populations, causing a plague of biblical proportions (Psalm 91:3-7, Psalm 91:9-10,). Bubonic plague, also known as the ‘Black Death’ that killed one fourth of Europe’s population in the 1300s, appeared as a great pestilence several times in the Old Testament, including in Psalm 91 and in 2 Samuel 24:14-25. Perhaps the clearest example of such a plague is recorded in 1 Samuel 6:4-19, where there is a specific reference to the tumors on people (bubos = the tumors of lymph glands) …

The Contradictory Definitions Of Heterochromatin: Transcription And Silencing, Kathryn Huisinga, Brent Brower-Toland, Sarah C.R. Elgin

Biology Faculty Research

Eukaryotic genomes are packaged in two general varieties of chromatin: gene-rich euchromatin and gene-poor heterochromatin. Each type of chromatin has been defined by the presence of distinct chromosomal proteins and posttranslational histone modifications. This review addresses recent findings that appear to blur the definitions of euchromatin and heterochromatin by pointing to the presence of typically heterochromatic modifications (including H3K9me) in euchromatin and typically euchromatic enzymes (including RNA polymerases) in heterochromatin. We discuss the implications of these new findings for the current definition of heterochromatin.

Predicting Distribution, Habitat Suitability And The Potential Loss Of Habitat For Sitta Formosa, The Beautiful Nuthatch, Jill C. Witt

Masters Theses

The beautiful nuthatch, Sitta formosa, occurs in high-altitude evergreen and semi-evergreen forests throughout the south and southeastern extent of the Himalayan Mountains. Populations of S. formosa are small, declining and severely fragmented as a result of habitat degradation and fragmentation, and therefore it is considered vulnerable by the World Conservation Union and is included in the 2004 Red List of Threatened Species. I used ecological niche factor analysis to model the potential distribution and predict suitable habitat for S. formosa. By using 59 presence locations, collected from museum specimens and biodiversity surveys, and together with topographic and …

Olfactory Bulb Neurons Of Adult Zebrafish Morphology, Distribution, Cellular Interactions And Structural Stability Following Deafferentation, Cynthia L. Fuller

Dissertations

The zebrafish is becoming an increasingly popular model for studies involving olfactory function, yet there is still much to be learned about the anatomy and circuitry of different cell types in the olfactory bulb. This study focuses on identifying the morphology and distribution of output neurons and interneurons in the olfactory bulb of adult zebrafish, Danio rerio . Furthermore, this investigation examines the cellular interactions of the primary output neuron, the mitral cell, and addresses the issue of neuronal plasticity by considering the structural stability of this cell type following loss of afferent innervation.

Using retrograde tract tracing with various …

Time Constraints Mediate Predator-Induced Plasticity In Immune Function, Condition, And Life History, Robby Stoks, Marjan De Block, Stefanie Slos, Wendy Van Doorslaer, Jens Rolff

Dartmouth Scholarship

The simultaneous presence of predators and a limited time for development imposes a conflict: accelerating growth under time constraints comes at the cost of higher predation risk mediated by increased foraging. The few studies that have addressed this trade-off have dealt only with life history traits such as age and size at maturity. Physiological traits have largely been ignored in studies assessing the impact of environmental stressors, and it is largely unknown whether they respond independently of life history traits. Here, we studied the simultaneous effects of time constraints, i.e., as imposed by seasonality, and predation risk on immune defense, …

Age And Population Structure Of Joshua Trees (Yucca Brevifolia) In The Northwestern Mojave Desert, Kimberly D. Gilliland, Nancy J. Huntly, J. E. Anderson

Biology Faculty Publications

Many desert perennials are long-lived, but there are few data on ages or population structures of desert plants. We used 2 methods to estimate ages of a population of Yucca brevifolia (Joshua tree) in southwestern Utah from a 14-year census of plant sizes. Plant height at the 1st census ranged from 0.08 m to 6.0 m, and trees grew in height at a mean rate of 3.75 cm ⋅ yr^–1. Plants also increased slowly in basal diameter (0.142 cm ⋅ yr^–1) and branch length (0.024 m ⋅ yr^–1), but basal diameter varied greatly from …

Thermal Stress On Intertidal Limpets: Long-Term Hindcasts And Lethal Limits, Mark Denny, Luke Miller, Christopher Harley

Faculty Publications, Biological Sciences

When coupled with long-term meteorological records, a heat-budget model for the limpet, Lottia gigantea, provides a wealth of information regarding environmental and topographic controls of body temperature in this ecologically important species. (1) The maximum body temperature predicted for any site (37.5°C) is insufficient to kill all limpets, suggesting that acute thermal stress does not set an absolute upper limit to the elevation of L. gigantea on the shore. Therefore, the upper limit must be set by behavioral responses, sublethal effects or ecological interactions. (2) Temperatures sufficient to kill limpets are reached at only a small fraction of substratum orientations …

Plasmid Probes For Screening Specific Genes In Large Fragment Dna Libraries, Leah Ferguson

Senior Honors Projects

Heliothis virescens, a member of the lepidopteran family, is of great importance to many people who rely on agriculture as a source of income because it is a pest of many important crops. Because H. virescens feeds on a broad array of hosts including cotton, tobacco, tomato, and soybean it has earned its place as a major nuisance in the United States. Heliothis subflexa is a close taxonomic relative of H. virescens, but the two species differ in that H. subflexa is a specialized herbivore that only feeds on plants in the genus Physalis. Studies have been performed to determine …

Comparative Genomic Analyses And Expression Of A Set Of Overlapping Open Reading Frames Of Frog Virus 3, Type Species Of Ranavirus (Family Iridoviridae), Wendy Guat Hoon Tan

Dissertations

Frog virus 3 (FV3) is the type species member of the genus Ranavirus (family Iridoviridae ). To better understand the molecular mechanisms involved in the replication of FV3, including transcription of its highly methylated DNA genome, the complete nucleotide sequence of the FV3 genome has been determined. The FV3 genome is 105, 903 base pairs long excluding the terminal redundancy. The G+C content of FV3 genome is 55% and it encodes 98 non-overlappingpotential open reading frames (ORFs) containing 50 to 1293 amino acids. Eighty-four ORFs have significant homology to known proteins of other iridoviruses, whereas 14 are unique FV3 ORFs. …

Automated Oxidase-Coupled Amperometric Microsensor With Integrated Electrochemical Actuation System For Continuous Sensing Of Saccharoids, Yadunandana Yellambalase, Jongwon Park, Chang-Soo Kim, Minsu Choi, Nohpill Park, Fabrizio Lombardi

Electrical and Computer Engineering Faculty Research & Creative Works

Recent developments for biosensors have been mainly focused on miniaturization and exploratory use of new materials. It should be emphasized that the absence of a novel "in-situ self-calibration/diagnosis technique" that is not connected to an external apparatus is a key obstacle to the realization of a biosensor for continuous use with minimum attendance. To address this deficiency, a novel needle-type biosensor system with fully automated operations is being developed, in which a novel oxidase-coupled amperometric sensor with oxygen depleting/generating actuator is interfaced with an electrochemical instrument and a perfusion system. Labview virtual instrument has been also developed to oversee the …

The Dogma Of The 30 Meter Riparian Buffer: The Case Of The Boreal Toad (Bufo Boreas Boreas), Michael C. Goates

Theses and Dissertations

We tested the adequacy of standard 30 m riparian buffers for semi-aquatic vertebrate species, using the boreal toad (Bufo boreas boreas) as an example. We monitored toad populations in south-central Utah using radio telemetry during the summers of 2003 and 2004. We found 30 m buffers inadequate for protecting boreal toads and suggest this is likely true for other species as well. Managers must consider several factors when constructing buffers: (1) Buffer requirements may vary by time of year. While we located toads most often in wet habitats, toads commonly utilized upland habitats in late summer, occasionally at distances greater …

Ampk Regulation Of Mouse Oocyte Meiotic Resumption In Vitro, Jing Chen, Emma R. Hudson, Maggie M. Chi, Aimee S. Chang, Kelle H. Moley, D. Grahame Hardie, Stephen M. Downs

Biological Sciences Faculty Research and Publications

We have previously shown that the adenosine analog 5-aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAR), an activator of AMP-activated protein kinase (AMPK), stimulates an increase in AMPK activity and induces meiotic resumption in mouse oocytes [Downs, S.M., Hudson, E.R., Hardie, D.G., 2002. A potential role for AMP-activated protein kinase in meiotic induction in mouse oocytes. Dev. Biol, 245, 200–212]. The present study was carried out to better define a causative role for AMPK in oocyte meiotic maturation. When microinjected with a constitutively active AMPK, about 20% of mouse oocytes maintained in meiotic arrest with dibutyryl cAMP (dbcAMP) were stimulated to undergo germinal vesicle breakdown (GVB), …

Cytochrome P4501a Is Induced In Endothelial Cell Lines From The Kidney And Lung Of The Bottlenose Dolphin, Tursiops Truncatus, Rita Anne Garrick, Bruce R. Woodin, Joanna Y. Wilson, Bobby L. Middlebrooks, John J. Stegman

Faculty Publications

Marine mammals respond to the presence of polycyclic and planar halogenated aromatic hydrocarbons (PAH or PHAH) with the induced expression in endothelium of cytochrome P4501A1, regulated through the aryl hydrocarbon receptor (AHR) transcription factor. Physiological responses in other animals, such as edema and inflammation indicate that the endothelium may be compromised by exposure to AHR agonists, which are ubiquitous in the marine environment. In other mammals and fish the cellular and molecular consequences of exposure to AHR agonists have been elucidated in cultured endothelial cells. We have cultured and characterized cetacean endothelial cells (EC) and used them in induction studies. …

A Dual-Genome Microarray For The Pea Aphid, Acyrthosiphon Pisum, And Its Obligate Bacterial Symbiont, Buchnera Aphidicola, Alex C. C. Wilson, Helen E. Dunbar, Gregory K. Davis, Wayne B. Hunter, David L. Stern, Nancy A. Moran

Biology Articles and Papers

Background

The best studied insect-symbiont system is that of aphids and their primary bacterial endosymbiont Buchnera aphidicola. Buchnera inhabits specialized host cells called bacteriocytes, provides nutrients to the aphid and has co-speciated with its aphid hosts for the past 150 million years. We have used a single microarray to examine gene expression in the pea aphid, Acyrthosiphon pisum, and its resident Buchnera. Very little is known of gene expression in aphids, few studies have examined gene expression in Buchnera, and no study has examined simultaneously the expression profiles of a host and its symbiont. Expression profiling …