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Serpentine: A Model Habitat For Botanical Research In Sri Lanka, Nishanta Rajakaruna, Alan J. M. Baker

Biological Sciences

Serpentine (ultramafic) outcrops are found in most parts of the world and for many years have attracted the attention of soil scientists and plant biologists alike due to the unusual nature of both the substrate and the life forms they harbour. In this paper, we introduce serpentine outcrops as a model habitat for botanical studies and review preliminary findings of a recently conducted soil and floristic survey of four of the five known serpentine outcrops in Sri Lanka. We hope that this paper will stimulate much-needed studies, both exploratory and experimental, and point to the immediate need for conservation of …

An Isotopic Examination Of Cave, Spring And Epigean Trophic Structures In Mammoth Cave National Park, Zacchaeus Greg Compson

Masters Theses & Specialist Projects

AN ISOTOPIC EXAMINATION OF CAVE, SPRING AND EPIGEAN TROPHIC STRUCTURES IN MAMMOTH CAVE NATIONAL PARK

Name: Zacchaeus Greg Compson Date: October 15, 2004 Pages: 56

Directed by: Philip Lienesch, Doug McElroy, Michael Stokes and Richard Bowker

Department of Biology Western Kentucky University

Abstract

High-water events in the Green River result in flow-reversals which flush native and introduced fishes into Mammoth Cave, posing threats to indigenous cave fauna. However, little is known about the trophic interactions between cave and epigean aquatic systems or their connectivity via natural springs. The purpose of this study was to use stable isotopes of C and …

Effect Of Zooid Spacing On Bryozoan Feeding Success: Is Competition Or Facilitation More Important?, Marney C. Pratt

Biological Sciences: Faculty Publications

Most Recent bryozoan species are encrusting sheets, and many of these colonies have densely packed feeding zooids. In this study, I tested whether tight packing of feeding zooids affects food capture. Colonies of a bryozoan with an encrusting sheet form (Membranipora membranacea) were dissected to produce individuals whose feeding zooids were (1) closely packed, (2) more widely spaced, or (3) isolated. For each type, rates of particle ingestion were measured in still water and in a freestream velocity of 2.7 cm s-1. Ingestion rate increased when zooids were closest together, probably because of reduced refiltration and increased feeding current strength …

Long-Lived Worms And Aging, Yuan Luo

Faculty Publications

Several investigators have generated long-lived nematode worms (Caenorhabditis elegans) in the past decade by mutation of genes in the organism in order to study the genetics of aging and longevity. Dozens of longevity assurance genes (LAG) that dramatically increase the longevity of this organism have been identified. All long-lived mutants of C. elegans are also resistant to environmental stress, such as high temperature, reactive oxygen species (ROS), and ultraviolet irradiation. Double mutations of some LAGS further extended life span up to 400%, providing more insight into cellular mechanisms that put limits on the life span of organisms. With …

Comparative Population Dynamics Of Freshwater Dinoflagellates Of The Genera Peridinium And Peridiniopsis, Andy Canion

Honors Theses

Freshwater dinoflagellates, like their marine relatives, have the potential to reach large population sizes known as blooms. Though they are not toxic like some marine forms, freshwater blooms may have a large impact in their respective ecosystem. This study investigated the temporal and spatial changes in population density of four Peridinium species (P. deflandrei, P. volzii, P. wisconsinense, and P. limbatum) and one Peridiniopsis species (Peridiniopsis polonicium) in Boondoggle Lake, a shallow lake (4.5 m) in northern Mississippi (Lafayette Co.). On each sampling date, measurements of the abiotic environment were made, including dissolved oxygen, temperature, pH, and turbidity. Also, water …

Expression Of Mslec1 Transgenes In Alfalfa Plants Causes Symbiotic Abnormalities, Nancy Fujishige

Biology Faculty Works

Legume lectins have been proposed to have important symbiotic roles during Rhizobium-legume symbioses. To test this hypothesis, the symbiotic responses of transgenic alfalfa plants that express a portion of the putative alfalfa lectin gene MsLEC1 or MsLEC2 in either the antisense or sense orientation were analyzed following inoculation with wild-type Sinorhizobium meliloti 1021. MsLEC1-antisense (LEC1AS) plants were stunted, exhibited hypernodulation, and developed not only abnormally large nodules but also numerous small nodules, both of which senesced prematurely. MsLEC2-antisense plants were intermediate in growth and nodule number compared with LEC1AS and vector control plants. The symbiotic abnormalities of MsLEC1-sense transgene plants …

Multiple Domains Of The Co-Chaperone Hop Are Important For Hsp70 Binding, Gregory M. Nelson, Patricia E. Carrigan, Patricia J. Roberts, Jha'nae Stoffer, Daniel L. Riggs, David F. Smith

Faculty Publications

The Hop/Sti1 co-chaperone binds to both Hsp70 and Hsp90. Biochemical and co-crystallographic studies have suggested that the EEVD-containing C terminus of Hsp70 or Hsp90 binds specifically to one of the Hop tetratricopeptide repeat domains, TPR1 or TPR2a, respectively. Mutational analyses of Hsp70 and Hop were undertaken to better characterize interactions between the C terminus of Hsp70 and Hop domains. Surprisingly, truncation of EEVD plus as many as 34 additional amino acids from the Hsp70 C terminus did not reduce the ability of Hsp70 mutants to co-immunoprecipitate with Hop, although further truncation eliminated Hop binding. Hop point mutations targeting a carboxylate …

Ecological Effects Of Transgenic Crops And The Escape Of Transgenes Into Wild Populations, Diana Pilson, Holly R. Prendeville

School of Biological Sciences: Faculty Publications

Ecological risks associated with the release of transgenic crops include nontarget effects of the crop and the escape of transgenes into wild populations. Nontarget effects can be of two sorts: (a) unintended negative effects on species that do not reduce yield and (b) greater persistence of the crop in feral populations. Conventional agricultural methods, such as herbicide and pesticide application, have large and well- documented nontarget effects. To the extent that transgenes have more specific target effects, transgenic crops may have fewer nontarget effects. The escape of transgenes into wild populations, via hybridization and introgression, could …

Assessment Of Obesity And Fear Of Fatness Among Inner-City Dublin Schoolchildren In A One-Year-Follow-Up Study, Anne Griffin, Katherine Younger, Mary Flynn

Articles

Background: Positive secular trends in adolescent obesity and an increased prevalence of fear of fatness, particularly among girls, have been documented world-wide. There is a lack of consensus about assessment criteria for childhood obesity and no standard exists for assessing Irish children. In 1990, the Irish National Nutrition Survey used body mass index (BMI) $26 kgm22 to describe the prevalence of overweight among Irish adolescents.

Objectives: (1) To examine the range in classification of Dublin schoolchildren as overweight according to four standard assessment methods; (2) to assess changes in weight status, prevalence of fear of fatness and accompanying slimming practices …

Tradeoffs In Community Properties Through Time In A Desert Rodent Community, Ethan P. White, S.K. Morgan Ernest, K. M. Thibault

Biology Faculty Publications

Resource limitation represents an important constraint on ecological communities, which restricts the total abundance, biomass, and community energy flux a given community can support. However, the exact relationship among these three measures of biological activity remains unclear. Here we use a simple framework that links abundance and biomass with an energetic constraint. Under constant energetic availability, it is expected that changes in abundance and biomass can result from shifts in the distribution of individual masses. We test these predictions using long-term data from a desert rodent community. Total energy use for the community has not changed directionally for 25 years, …

Temporal Dynamics In The Structure Andcomposition Of A Desert Rodent Community, K. M. Thibault, Ethan P. White, S.K. Morgan Ernest

Biology Faculty Publications

The rank-abundance distribution (RAD) represents the manner in which species divide resources. Community-specific division rules that determine resource allocation among species, and thereby the shape of the RAD, have been hypothesized to account for observed stability of local species richness over time. While the shape of the RAD has been well studied, the temporal dynamics of this distribution have received much less attention. Here we assess changes in the shape of the RAD through time in a desert rodent community in Arizona (USA). Because energy use may be more appropriate for studying resource division than abundance, we also evaluate an …

The Learning Garden: A Case Study, Laurie Ann Kellogg Hayzlett

Dissertations and Theses @ UNI

How do we best capture the interest of our students? Are there environments that would better serve the needs of our students and the objectives of our schools? Reflection on these questions led to the planning and development of the Leaming Garden. This research was a case study of the use of the Leaming Garden. Proposed and actual uses were identified using teacher questionnaires, student and teacher interviews and researcher field notes. Teachers and students were asked about their use of the Leaming Garden both in conjunction with classes and for activities during off-school hours. This study was conducted in …

Antipredator Behavior And Physiology Determine Lestes Species Turnover Along The Pond-Permanence Gradient, Robby Stoks, Mark A. Mcpeek

Dartmouth Scholarship

Identifying key traits that shape trade-offs that restrict species to only a subset of environmental gradients is crucial to understanding and predicting species turnover. Previous field experiments have shown that larvae of Lestes damselfly species segregate along the entire gradient of pond permanence and predator presence and that differential predation risk and life history constraints together shape their distribution. Here, we report laboratory experiments that identify key differences in behavior and physiology among species that structure their distributions along this gradient. The absence of adaptive antipredator behavioral responses against large dragonfly larvae and fish of Lestes dryas, the only species …

Body Mass Of Late Quaternary Mammals (Data Set), Felisa A. Smith, S. Kathleen Lyons, S.K. Morgan Ernest, Kate E. Jones, Kansas State University, Tamar Dayan, Pablo A. Marquet, James H. Brown, John P. Haskell

School of Biological Sciences: Faculty Publications

The purpose of this data set was to compile body mass information for all mammals on Earth so that we could investigate the patterns of body mass seen across geographic and taxonomic space and evolutionary time. We were interested in the heritability of body size across taxonomic groups (How conserved is body mass within a genus, family, and order?), in the overall pattern of body mass across continents (Do the moments and other descriptive statistics remain the same across geographic space?), and over evolutionary time (How quickly did body mass patterns iterate on the patterns seen today? Were the Pleistocene …

Development Of A Method For Determining Antioxidant Efficacy Against Hydroxyl Radicals, Cherie Hacker

Masters Theses

Hydroxyl free radicals are biologically important molecules in that they attack proteins, lipids and DNA to obtain an electron to fill their outer valence shell. The consequences of such attacks include protein degradation, lipid peroxidation and DNA damage, which leads to many diseases and cancer. While there are many antioxidant assays available to predict anti-radical properties of compounds against different free radicals, the assessment of hydroxyl radical damage has been challenging. This is due to the extremely high reaction rate of hydroxyl radicals. The present study defines an in vitro assay that quantitatively detects antioxidant efficacy against hydroxyl free radicals, …

Djungarian Hamsters Exhibit Temperature-Dependent Dietary Fat Choice In Long Days, Sara Hiebert Burch, Kelley Carl Hauser , '99, Abbas Ebrahim , '00

Biology Faculty Works

Previous studies have shown that whole-animal thermal responses of ectotherms and heterotherms (e.g., hibernators), both of which experience a wide range of body temperatures, are related to the saturation level of somatic lipids, which in turn can be influenced by the ratio of saturated and unsaturated fatty acids in the diet. This study demonstrates that Djungarian hamsters held in long days display ambient temperature dependent choice of dietary fats, increasing their preference for saturated fats when ambient temperature increases ( to 27 degreesC) and later reversing this preference when ambient temperature is returned to its original value ( 8 degreesC). …

The Biology Of Canadian Weeds. 126. Amaranthus Albus L., A. Blitoides S. Watson And A. Blitum L., Mihai Costea, François J. Tardif

Biology Faculty Publications

A review of biological information is provided for three species of the genus Amaranthus: A. albus L., A. blitoides S. Watson and A. blitum L. The last species has been revised taxonomically and a new subspecies for Canada is presented—A. blitum subsp. emarginatus (Moq. ex Uline & Bray) Carretero, Munoz Garmendia & Pedrol. Amaranthus albus and A. blitoides are native to the U.S.A. and introduced to Canada. Both species are annual ruderal and agrestal weeds. During the past 100 yr the two species have spread across most provinces of Canada, but the greatest frequency and abundance have been …

Functional And Comparative Genomic Analyses Of An Operon Involved In Fructooligosaccharide Utilization By Lactobacillus Acidophilus, Rodolphe Barrangou, Eric Altermann, Robert Hutkins, Raul J. Cano, Todd Klaenhammer

Biological Sciences

Lactobacillus acidophilus is a probiotic organism that displays the ability to use prebiotic compounds such as fructooligosaccharides (FOS), which stimulate the growth of beneficial commensals in the gastrointestinal tract. However, little is known about the mechanisms and genes involved in FOS utilization by Lactobacillus species. Analysis of the L. acidophilus NCFM genome revealed an msm locus composed of a transcriptional regulator of the LacI family, a four-component ATP-binding cassette (ABC) transport system, a fructosidase, and a sucrose phosphorylase. Transcriptional analysis of this operon demonstrated that gene expression was induced by sucrose and FOS but not by glucose or fructose, …

Differences In Cottonwood Growth Between A Losing And A Gaining Reach Of An Alluvial Floodplain, Mary J. Harner, Jack Arthur Stanford

Biological Sciences Faculty Publications

Interstitial flow of river (hyporheic) water influences algal productivity, benthic assemblages, and locations of fish spawning. However, little is known of the effects of hyporheic flow on the growth of riparian vegetation. By increasing water availability and nutrient delivery, regional upwelling of hyporheic water may increase the growth of terrestrial vegetation. We tested and accepted the hypothesis that cottonwood trees (Populus trichocarpa) in a gaining reach of an alluvial floodplain grow faster than trees in a losing reach by comparing basal areas and ages on an expansive floodplain in western Montana (USA). Trees in the gaining reach had …

Phenotypic Plasticity And Interactions Among Plants, Ragan M. Callaway, Steven C. Pennings, Christina L. Richards

Biological Sciences Faculty Publications

We know a great deal about the plastic responses of plant phenotypes to the abiotic and biotic environment, but very little about the consequences of phenotypic plasticity for plant communities. In other words, we know that plant traits can vary widely for a given genotype, but we know little about the importance of trait-mediated interactions (TMI) among plants. Here, we discuss three major factors that affect the expression of phenotypic plasticity: variation in the abiotic environment, variation in the presence or identity of neighbors, and variation in herbivory. We consider how plastic responses to these factors might affect interactions among …

Biochemical Composition Of Embryonic Blue Crabs Callinectes Sapidus Rathbun 1896 (Crustacea : Decapoda) From The Gulf Of Mexico, Janet R. Jacobs, Patricia M. Biesiot, Harriet M. Perry, Christine Trigg

Faculty Publications

Blue crab Callinectes sapidus embryos from the Mississippi Sound were sampled in spring and in late summer to determine patterns of biochemical composition and of yolk utilization during embryogenesis and to ascertain potential seasonal differences in biochemical composition. The diameter of spring embryos was similar to 6% greater than summer embryos but this significant size difference was due to increased water content, not to increased organic content. The general trend in initial biochemical composition was similar in both seasons; protein was the primary component at similar to 50% of initial dry weight followed by lipid (similar to 30%), ash (similar …

Microalgal-Meiofaunal Trophic Relationships In Muddy Intertidal Estuarine Sediments, James L. Pinckney, Kevin R. Carman, S. Elizabeth Lumsden, Sabrina N. Hymel

Faculty Publications

The determination of the primary factors controlling carbon (C) transfer rates in situ are a basic requirement for developing a mechanistic view of the processes that regulate benthic microbial community structure and function. In many estuarine ecosystems, the base of the food web is dominated by microalgal production; however, information on the quantitative relationships and process rates of meiofaunal grazers and benthic microalgal (BMA) producers is limited to a few habitats and short temporal scales. The primary objective of this study was to examine the trophic interactions between meiofaunal grazers and BMA producers to determine if grazing is a primary …

Five-Member Gene Family Of Bartonella Quintana, Michael F. Minnick, Kate N. Sappington, Laura S. Smitherman, Siv G. E. Andersson, Olof Karlberg, James A. Carroll

Biological Sciences Faculty Publications

Bartonella quintana, the agent of trench fever and an etiologic agent of bacillary angiomatosis, has an extraordinarily high hemin requirement for growth compared to other bacterial pathogens. We previously identified the major hemin receptor of the pathogen as a 30-kDa surface protein, termed HbpA. This report describes four additional homologues that share approximately 48% amino acid sequence identity with hbpA. Three of the genes form a paralagous cluster, termed hbpCAB, whereas the other members, hbpD and hbpE, are unlinked. Secondary structure predictions and other evidence suggest that Hbp family members are beta-barrels located in the outer membrane and contain eight …

The Comparative Energetics And Growth Strategies Of Sympatric Antarctic And Sub Antarctic Fur Seal Pups, At Iles Crozet, J Py Arnould, S P. Luque, C Guinet, D P. Costa, J Kingston, Scott A. Shaffer

Faculty Publications, Biological Sciences

The period of maternal dependence is a time during which mammalian infants must optimise both their growth and the development of behavioural skills in order to successfully meet the demands of independent living. The rate and duration of maternal provisioning, post-weaning food availability and climatic conditions are all factors likely to influence the growth strategies of infants. While numerous studies have documented differences in growth strategies at high taxonomic levels, few have investigated those of closely related species inhabiting similar environments. The present study examined the body composition, metabolism and indices of physiological development in pups of Antarctic fur seals …

Educating For Social Responsibility: Changing The Syllabus Of Developmental Biology, Scott F. Gilbert, A. Fausto-Sterling

Biology Faculty Works

Developmental biology is deeply embedded in the social issues of our times. Such topics as cloning, stems cells, reproductive technologies, sex selection, environmental hormone mimics and gene therapy all converge on developmental biology. It is therefore critical that developmental biologists learn about the possible social consequences of their work and of the possible molding of their discipline by social forces. We present two models for integrating social issues into the developmental biology curriculum. One model seeks to place discussions of social issues into the laboratory portion of the curriculum; the other model seeks to restructure the course, such that developmental …

The Morphogenesis Of Evolutionary Developmental Biology, Scott F. Gilbert

Biology Faculty Works

The early studies of evolutionary developmental biology (Evo-Devo) come from several sources. Tributaries flowing into Evo-Devo came from such disciplines as embryology, developmental genetics, evolutionary biology, ecology, paleontology, systematics, medical embryology and mathematical modeling. This essay will trace one of the major pathways, that from evolutionary embryology to Evo-Devo and it will show the interactions of this pathway with two other sources of Evo-Devo: ecological developmental biology and medical developmental biology. Together, these three fields are forming a more inclusive evolutionary developmental biology that is revitalizing and providing answers to old and important questions involving the formation of biodiversity on …

Are Hummingbirds Facultatively Ammonotelic? Nitrogen Excretion And Requirements As A Function Of Body Size, Todd J. Mcwhorter, Donald R. Powers, Carlos Martinez Del Rio

Faculty Publications - Department of Biological & Molecular Science

Most birds are uricotelic. An exception to this rule may be nectar-feeding birds, which excrete significant amounts of ammonia under certain conditions. Although ammonia is toxic, because it is highly water soluble its excretion may be facilitated in animals that ingest and excrete large amounts of water. Birdpollinated plants secrete carbohydrate- and water-rich floral nectars that contain exceedingly little protein. Thus, nectarfeeding birds are faced with the dual challenge of meeting nitrogen requirements while disposing of large amounts of water. The peculiar diet of nectar-feeding birds suggests two hypotheses: (1) these birds must have low protein requirements, and (2) when …

The Anorexigenic Fatty Acid Synthase Inhibitor, C75, Is A Nonspecific Neuronal Activator, Kanji A. Takahashi, James L. Smart, Hongyan Liu, Roger D. Cone

Faculty Publications - Department of Biological & Molecular Science

C75, a recently derived compound that potently suppresses feeding and induces weight loss, has been proposed to act mainly by inhibiting fatty acid synthase (FAS) in central neurons that control feeding. For example, normal, fasting- associated, hypothalamic increases in neuropeptide Y (NPY)/Agouti-related protein (AGRP) expression and decreases in proopiomelanocortin (POMC)/cocaine and amphetamine regulated transcript (CART) expression were reported to be blocked by C75. Using loose-patch extracellular recording in acute slices, we tested the effect of C75 on anorexigenic POMC neurons and orexigenic NPY neurons of the hypothalamic arcuate nucleus, which were identified by promoter-driven GFP expression, as well as on …

Effect Of Water Removal On Introduced Caddisflies From A Tropical Mountain Stream, Mollie D. Mcintosh, Mark Eric Benbow, Albert J. Burky

Biology Faculty Publications

Tropical island streams worldwide are being threatened by existing or proposed dams and diversions. Numerous streams of the Hawaiian Islands have diversions that remove freshwater for human use; however, little research has addressed diversion effects on aquatic insect communities in tropical streams. We studied the effect of water removal by a stream diversion on density and biomass of two introduced Trichoptera, Cheumatopsyche analis (Banks) (Hydropsychidae) and Hydroptila potosina (Buenoa- Soria) (Hydroptilidae), in Iao Stream, Maui, Hawaii, from April-August 2000. Both species seem to have multivoltine life cycles. Pooled Trichoptera (both species) biomass was significantly greater above the diversion (178.3 mg.m-2 …

Dynamic Versus Instantaneous Models Of Diet Choice, Brian O. Ma, Peter A. Abrams, Chad Brassil

School of Biological Sciences: Faculty Publications

We investigate the dynamics of a series of two-prey-one predator models in which the predator exhibits adaptive diet choice based on the different energy contents and/or handling times of the two prey species. The predator is efficient at exploiting its prey and has a saturating functional response; these two features combine to produce sustained population cycles over a wide range of parameter values. Two types of models of behavioral change are compared. In one class of models (“instantaneous choice”), the probability of acceptance of the poorer prey by the predator instantaneously approximates the optimal choice, given current prey densities. In …