Digital Commons Network^™

The Effects Of A Blueberry-Enriched Diet On Particulate Matter-Induced Lung Injury, Oxidative Stress, And Inflammation In An Adult Mouse Model, Jimmy Taylor

Honors Capstones

No abstract provided.

Olfactory Behavioral Responses Of Mosquito Vectors To Select Attractants And Floral Scents As Related To Circadian Rhythms And Photoperiod Regimes, Bernadette A. Ferraro

Biomedical Sciences Theses & Dissertations

This dissertation discusses mosquito behavioral activities involving circadian rhythms defined as insect sensitivity to select of chemical volatiles that vary throughout the 24-hour day. Circannual rhythms occur over seasons varying in photoperiod, defined as the seasonal cycle of light and darkness. These cycles can be endogenously controlled by circadian clocks. The impetus for this research was initiated when reading about the neglected temporal dimension in the context of insect chemical ecology, including insect olfaction. It was proposed that sensitivity to odors does not change in general, but specific sensitivities could vary according to time of day. Chemical scents emitted by …

Nutritional Evaluation Of Maize Plant Fodder Grown In Spring And Autumn Season In Punjab, Pakistan, Nafeesa Qudsia Hanif, Nadeem Akhtar

Journal of Bioresource Management

Present study was planned to assess the nutritional evaluation of maize plant grown in spring and autumn seasons. For this purpose, a total of 277 (n=130 in spring and n=147 in autumn season) samples were collected from high maize-growing localities i.e. Kasur, Pakpattan, Okara, Burewala, Sahiwal, Lahore and Melsi. These samples were analyzed for different parameters such as dry matter (DM) and Crude protein (CP) etc. It was noticed that during spring season the values of dry matter (DM), neutral detergent fiber (NDF), acid detergent fiber (ADF) and starch were significantly higher than autumn season values. On the other hand, …

Evaluation Of The Potential Of Freshly Bred Orange-Fleshed Sweet Potato Varieties In Combating Vitamin A Deficiency, Badi M. Bao, Leonard W.T. Fweja

Tanzania Journal of Science

Orange-fleshed sweet potato (OFSP) is advocated as a rich and readily accessible source of vitamin A. This study was done to evaluate the potential of the newly bred OFSP varieties in combating vitamin A deficiency. OFSP varieties and white fleshed sweet potato (WFSP) varieties were used for the study. β-carotene was extracted with acetone and  its spectrophotometric reading at 450 nm used to calculate its concentration. The optimum amount of OFSP required to meet vitamin A needs for children of different age groups were established. Results indicate that β-carotene was below detection levels in WFSP varieties but was detectable in …

Spore Germination For Three Edible Zimbabwean Mushrooms Using Biostimulants, Melody Pamire, Wilson Parawira

Tanzania Journal of Science

Spores play critical roles in the population and community development of ectomycorrhizal fungi (EMF), which grow naturally in the presence of host plants. EMFs have not been cultivated commercially in most countries including those in Africa. In vitro germination of their spores is refractory and has been witnessed only in the presence of stimulants. In this study, germination of spores for three wild ectomycorrhizal fungi commonly collected in Zimbabwe was investigated under the influence of three biostimulants in Murashige and Skoog (MS) and Potato Dextrose Agar (PDA) media for the first time. The stimulatory capacity of tomato or potato roots …

Sodium And Potassium Intakes And Their Ratio In Adults (18–90 Y): Findings From The Irish National Adult Nutrition Survey, Eoin James Morrissey, Miriam Giltinan, Laura Kehoe, Anne P. Nugent, Breige A. Mcnulty, Albert Flynn, Janette Walton

Department of Biological Sciences Publications

An individual’s sodium to potassium intake ratio (Na:K) has been shown to be an important predictor of hypertension. The aim of this study was to estimate the mean 24 h urinary Na, K and Na:K of Irish adults and to identify the foods that determine Na:K in a nationally representative sample of Irish adults. This study was based on data from the Irish National Adult Nutrition Survey (2008–2010) (NANS), which collected spot urine samples and dietary data in a nationally representative sample of Irish adults aged 18+ years. The mean urinary molar Na:K of Irish men and women was 1.90 …

De Novo Sequencing And Analysis Of Salvia Hispanica Tissue-Specific Transcriptome And Identification Of Genes Involved In Terpenoid Biosynthesis, James Wimberley, Joseph Cahill, Hagop S. Atamian

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Salvia hispanica (commonly known as chia) is gaining popularity worldwide as a healthy food supplement due to its low saturated fatty acid and high polyunsaturated fatty acid content, in addition to being rich in protein, fiber, and antioxidants. Chia leaves contain plethora of secondary metabolites with medicinal properties. In this study, we sequenced chia leaf and root transcriptomes using the Illumina platform. The short reads were assembled into contigs using the Trinity software and annotated against the Uniprot database. The reads were de novo assembled into 103,367 contigs, which represented 92.8% transcriptome completeness and a diverse set of Gene Ontology …

Liver Ubd Is Upregulated In The Lew.1wr1 Rat, Helen Gibson, Amelia Clopp, Genoah Collins

Research Horizons Day Posters

No abstract provided.

Context-Dependent Dynamics Lead To The Assembly Of Functionally Distinct Microbial Communities, Leonora S. Bittleston, Matti Gralka, Gabriel E. Levanthal, Itzhak Mizrahi, Otto X. Cordero

Biology Faculty Publications and Presentations

Niche construction through interspecific interactions can condition future community states on past ones. However, the extent to which such history dependency can steer communities towards functionally different states remains a subject of active debate. Using bacterial communities collected from wild pitchers of the carnivorous pitcher plant, Sarracenia purpurea, we test the effects of history on composition and function across communities assembled in synthetic pitcher plant microcosms. We find that the diversity of assembled communities is determined by the diversity of the system at early, pre-assembly stages. Species composition is also contingent on early community states, not only because of …

Discovery Of A Bacterial Peptide As A Modulator Of Glp-1 And Metabolic Disease, Catherine Tomaro-Duchesneau, Stephanie L Levalley, Daniel Roeth, Liang Sun, Frank T Horrigan, Markus Kalkum, Joseph M Hyser, Robert A Britton

Faculty, Staff and Students Publications

Early work in rodents highlighted the gut microbiota's importance in metabolic disease, including Type II Diabetes Mellitus (T2DM) and obesity. Glucagon-like peptide-1 (GLP-1), an incretin secreted by L-cells lining the gastrointestinal epithelium, has important functions: promoting insulin secretion, insulin sensitivity, and β-cell mass, while inhibiting gastric emptying and appetite. We set out to identify microbial strains with GLP-1 stimulatory activity as potential metabolic disease therapeutics. Over 1500 human-derived strains were isolated from healthy individuals and screened for GLP-1 modulation by incubating bacterial cell-free supernatants with NCI H716 L-cells. Approximately 45 strains capable of increasing GLP-1 were discovered. All GLP-1 positive …

Tropical Pitcher Plants (Nepenthes) Act As Ecological Filters By Altering Properties Of Their Fluid Microenvironments, Kadeem J. Gilbert, Leonora S. Bittleston, Wenfei Tong, Naomi E. Pierce

Biology Faculty Publications and Presentations

Characteristics of host species can alter how other, interacting species assemble into communities by acting as ecological filters. Pitchers of tropical pitcher plants (Nepenthes) host diverse communities of aquatic arthropods and microbes in nature. This plant genus exhibits considerable interspecific diversity in morphology and physiology; for example, different species can actively control the pH of their pitcher fluids and some species produce viscoelastic fluids. Our study investigated the extent to which Nepenthes species differentially regulate pitcher fluid traits under common garden conditions, and the effects that these trait differences had on their associated communities. Sixteen species of Nepenthes …

Seasonal And Interannual Variability Of Phytoplankton Abundance And Community Composition On The Central Coast Of California, Alex Barth, Ryan K. Walter, Ian C. Robbins, Alexis Pasulka

Physics

Variations in the abundance and composition of phytoplankton greatly impact ecosystem structure and function. Within the California Current System (CCS), phytoplankton community structure is tightly coupled to seasonal variability in wind-driven coastal upwelling, a process that drives changes in coastal water temperatures and nutrient concentrations. Based on approximately a decade (2008-2018) of weekly phytoplankton measurements, this study provides the first characterization of the seasonal and interannual variability of phytoplankton abundance and composition in San Luis Obispo (SLO) Bay, an understudied region within the CCS. Overall, the seasonality of phytoplankton in SLO Bay mirrored that of the larger CCS; diatoms dominated …

Anthropometric Characteristics Of The Population Of The Aral Region Of Uzbekistan, V. O. Yerkudov, A. P. Pugovkin, A. T. Matchanov, B. Yu. Akhmedova

Karakalpak Scientific Journal

The diversity of the national composition and the unfavorable ecological state of the Aral Sea region is the rationale for the relevance of the study of morphophysiological characteristics of the population living in this territory. The aim of the study was a comparative investigation of ethnic diversity of anthropometric distinctions in youngsters of both sexes – habitants of the Republic of Karakalpakstan (Uzbekistan).

Operational Large-Area Land-Cover Mapping: An Ethiopia Case Study, Trevor Caughlin

Biology Faculty Publications and Presentations

Knowledge of land cover and land use nationally is a prerequisite of many studies on drivers of land change, impacts on climate, carbon storage and other ecosystem services, and allows for sufficient planning and management. Despite this, many regions globally do not have accurate and consistent coverage at the national scale. This is certainly true for Ethiopia. Large-area land-cover characterization (LALCC), at a national scale is thus an essential first step in many studies of land-cover change, and yet is itself problematic. Such LALCC based on remote-sensing image classification is associated with a spectrum of technical challenges such as data …

Patterns And Mechanisms Of Heterogeneous Breeding Distribution Shifts Of North American Migratory Birds, Hanna M. Mccaslin, Julie A. Heath

Biology Faculty Publications and Presentations

There is widespread evidence that species distributions are shifting in response to climate change. Warming temperatures and climate niche constraints are hypothesized drivers of northward shifts in temperate migratory bird breeding distributions, but heterogeneity in the direction of distribution shifts suggests that the climate niche hypothesis does not explain all changes in distributions. We propose that: 1) changes in migration costs and benefits related to dampened seasonal differences between breeding and winter areas, 2) sensitivity to supplemental cues that affect duration of migration and onset of reproduction, 3) a latitudinal mismatch-driven fitness gradient, or a combination of these drivers may …

Life Line March 2020, Otterbein Biology And Earth Science Department

Life Line - The Biology Department Newsletter

The Department Welcomes Dr. Sinn; Modeling to Help with Global Research; The Paradise of Bombs Revisited; The End of an Era in Conesville Ohio; Reports from two recipients of the Melinda Phinney Award for Pre-Med Travel Experiences; Preparing Skins for Study; Genomics in the Jungle; Zoo Program Gets New T -Shirt and Sweatshirt Designs; Aquarium Track Dives Right In; Dr. Svitana’s Sabbatical Accomplishments;Biology Behind Bars; Grossology: The Science of Icky, Sticky, Disgusting Things.

Gnrh As A Neuromodulator In Midbrain Sensory Regions During The Female Cichlid Reproductive Cycle, Mark Anthony Maier Ii

Honors Capstones

No abstract provided.

Carbonatites As Rock Fertilizers: A Review, James Mc Jones, Frédérique C. Guinel, Pedro M. Antunes

Biology Faculty Publications

Rock fertilizers are geological resources used in agriculture for their nutrient content, but slow weathering rates hinder their effectiveness. Carbonatites are igneous rocks made mostly of carbonate minerals with a relatively high weathering rate and often containing nutrient-bearing accessory minerals (e.g., apatite and biotite). Despite evidence supporting their potential as rock fertilizers, a comprehensive review of such data is missing in the literature. Furthermore, when studies on agricultural uses of carbonatites exist, they typically center on applied research aspects (i.e., “does it work?”) rather than on basic research aspects (i.e., “how does it work?”). Here we evaluate the applicability of …

The First Gynandromorph Of The Neotropical Bee Megalopta Amoena (Spinola, 1853) (Halictidae) With Notes On Its Circadian Rhythm, Erin Krichilsky, Álvaro Vega-Hidalgo, Kate Hunter, Callum Kingwell, Chelsey Ritner, William Wcislo, Adam Smith

All PIRU Publications

Gynandromorphy is an anomaly that results in an organism phenotypically expressing both male and female characteristics. Here we describe the first gynandromorph of the bee species Megalopta amoena (Spinola, 1853) (Halictidae, Augochlorini) and the second record of this anomaly within the genus Megalopta. Additionally, we analyzed the bee’s circadian rhythm, which has never before been quantified for a gynandromorph. The gynandromorph showed a deviant activity pattern; it was intermediate between that of the male and female M. amoena. Our results imply that the brains of bilateral gynandromorphs may have mixed sex-specific signaling. Based on four days of recording, …

Growing Biofuel Feedstocks In Copper-Contaminated Soils Of A Former Superfund Site, Virinder Sidhu, Dibyendu Sarkar, Rupali Datta

Michigan Tech Publications, Part 1

Copper mining in the Upper Peninsula of Michigan in the mid-19th century generated millions of tons of mining waste, called stamp sand, which was deposited into various offshoots of Lake Superior. The toxic stamp sand converted the area into barren, fallow land. Without a vegetative cover, stamp sand has been eroding into the lakes, adversely affecting aquatic life. Our objective was to perform a greenhouse study, to grow cold-tolerant oilseed crops camelina (Camelina sativa) and field pennycress (Thlaspi arvense) on stamp sand, for the dual purpose of biofuel production and providing a vegetative cover, thereby decreasing erosion. Camelina and field …

Navigating Healthcare Science Student Learning And Engagement Through Implementation Of A Virtual Classroom, Santanu De, Gesulla Cavanaugh

Biology Faculty Proceedings, Presentations, Speeches, Lectures

Objective. This study explored whether virtual classrooms can be utilized to facilitate student learning and engagement. Background. University students and their learning approaches undergo constant changes, mainly due to advances in technology. Therefore, student expectations are continuously shifting. Although technology allows easier access to learning material, students still depend on a structured learning environment facilitated by an instructor to receive and process the correct information. Methods. A virtual classroom developed and housed in Second Life was used to deliver a week-long course on health promotion. Thirty students from different healthcare science programs participated in the study. After …

Sustainable, Alginate-Based Sensor For Detection Of Escherichia Coli In Human Breast Milk, Nicholas Kikuchi, Margaret May, Matthew Zweber, Jerard Madamba, Craig M. Stephens, Unyoung Kim, Maryam Mobed-Miremadi

Bioengineering

There are no existing affordable diagnostics for sensitive, rapid, and on-site detection of pathogens in milk. To this end, an on-site colorimetric-based sustainable assay has been developed and optimized using an L₁₆ (5⁴) Taguchi design to obtain results in hours without PCR amplification. To determine the level of Escherichia coli (E. coli) contamination, after induction with 150 µL of breast milk, the B-Per bacterial protein extraction kit was added to a solution containing an alginate-based microcapsule assay. Within this 3 mm spherical novel sensor design, X-Gal (5-Bromo-4-Chloro-3-Indolyl β-_D-Galactopyranoside) was entrapped at a concentration of 2 …

Invasive Vegetation Affects Amphibian Skin Microbiota And Body Condition, Obed HernáNdez-GóMez, Allison Q. Byrne, Alex R. Gunderson, Thomas S. Jenkinson, Clay F. Noss, Andrew P. Rothstein, Molly C. Womack, Erica B. Rosenblum

Biology Faculty Publications

Invasive plants are major drivers of habitat modification and the scale of their impact is increasing globally as anthropogenic activities facilitate their spread. In California, an invasive plant genus of great concern is Eucalyptus. Eucalyptus leaves can alter soil chemistry and negatively affect underground macro- and microbial communities. Amphibians serve as excellent models to evaluate the effect of Eucalyptus invasion on ground-dwelling species as they predate on soil arthropods and incorporate soil microbes into their microbiotas. The skin microbiota is particularly important to amphibian health, suggesting that invasive plant species could ultimately affect amphibian populations. To investigate the potential for …

Isotope-Based Methods For Evaluating Fish Trophic Geographies, Julie L. Vecchio

USF Tampa Graduate Theses and Dissertations

Data on the movement and diets of fish during a variety of life stages are important inputs to fisheries stock assessments and marine ecosystem models. Stable isotopes may provide previously inaccessible information on movement and diet of a variety of managed and forage fish species. Here I used several novel means of interpretation for stable isotope data to infer diets and movements of several important fisheries species over both short (weeks to months) and long (lifetime) timescales. To calculate a constant partitioning offset (CPO) between the δ¹⁵N of muscle and of liver tissue, I conducted a literature search …

Yeast Copper Proteins And Reactive Oxygen Species In Effecting Lifespan, Megan Bestwick

Post-Grant Reports

Mitochondria are essential organelles in most eukaryotic cells because of their role in metabolism and the production of ATP by the oxidative phosphorylation (OXPHOS) pathway, as well as other key cellular processes. Metal cofactors, such as copper (Cu) and iron (Fe), are incorporated into OXPHOS protein complexes of yeast located within the inner membrane of the mitochondria. Misincorporation or modulation of these available metals in mitochondrial enzymes leads to the production of reactive oxygen species (ROS). ROS are reactive molecules containing oxygen such as peroxides, superoxide, and hydroxyl radicals. Yeast are a good model for studying aging and the effect …

Juvenile Rank Acquisition Is Associated With Fitness Independent Of Adult Rank, Eli D. Strauss, Daizaburo Shizuka, Kay E. Holekamp

School of Biological Sciences: Faculty Publications

Social rank is a significant determinant of fitness in a variety of species. The importance of social rank suggests that the process by which juveniles come to establish their position in the social hierarchy is a critical component of development. Here, we use the highly predictable process of rank acquisition in spotted hyenas to study the consequences of variation in rank acquisition in early life. In spotted hyenas, rank is ‘inherited’ through a learning process called ‘maternal rank inheritance.’ This pattern is very consistent: approximately 80% of juveniles acquire the exact rank expected under the rules of maternal rank inheritance. …

Using Zebrafish (Danio Rerio) To Study The Behavioral Impacts Of Early Bisphenol F Exposure Reveals Decreased Swim Speed, Increased Distance Between Fish, And Increased Freezing Behaviors, Meghan Conner, Edward A. Freeman

Biology Faculty/Staff Publications

The widespread use of endocrine disrupting chemicals (EDCs) has been a source of concern because of their various effects on the endocrine system. These effects include metabolic disorders, complications in reproductive health, hormone-related cancers, and neurodevelopmental disorders. Of particular concern is bisphenol A (BPA), a synthetic compound commonly found in consumer products such as water bottles, thermal receipt paper, and epoxy resins used in processed food packaging. Previous studies have shown that BPA can mimic estrogen through a variety of mechanisms and thus elicit an endocrine response. Some manufacturers have responded by removing BPA from their products; however, studies using …

The Allometry Of Daily Energy Expenditure In Hummingbirds: An Energy Budget Approach, Anushu Shankar, Donald R. Powers, Liliana M. Dávalos, Catherine H. Graham

Faculty Publications - Department of Biological & Molecular Science

1. Within-clade allometric relationships represent standard laws of scaling between energy and size, and their outliers provide new avenues for physiological and ecological research. According to the metabolic-level boundaries hypothesis, metabolic rates as a function of mass are expected to scale closer to 0.67 when driven by surface-related processes (e.g. heat or water flux), while volume-related processes (e.g. activity) generate slopes closer to one.

2. In birds, daily energy expenditure (DEE) scales with body mass (M) in the relationship log (DEE)=2.35+0.68×log (M), consistent with surface-level processes driving the relationship. However, taxon-specific patterns differ from the scaling slope of all birds. …

Targeting Cancer-Anorexia Cachexia Syndrome And Septic Inflammatory-Based Atrophy With R/S 1,3 Butanediol Acetoacetate Diester, Andrew P. Koutnik

USF Tampa Graduate Theses and Dissertations

Cancer anorexia cachexia syndrome (CACS) is a distinct atrophy disease negatively influencing multiple aspects of clinical care and patient quality of life. Although it directly causes 20% of all cancer-related deaths, there are currently no model systems that encompass the entire multifaceted syndrome, nor are there any effective therapeutic treatments. Here, we show that the VM-M3 mouse model of systemic metastasis demonstrates a novel, immunocompetent, logistically feasible, repeatable phenotype with progressive tumor growth, spontaneous metastatic spread, and the full multifaceted CACS with expected sex dimorphisms across tissue wasting. We also demonstrate that the ubiquitin proteasomal degradation pathway was significantly upregulated …

Polyphenol-Rich Purple Corn Pericarp Extract Adversely Impacts Herbivore Growth And Development, Mandeep Tayal, Pavel Somavat, Isabella Rodriguez, Tina Thomas, Bradley O. Christoffersen, Rupesh R. Kariyat

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Plant secondary metabolites such as terpenes, phenolics, glycosides, and alkaloids play various functional roles including pigmentation, foliar and floral volatile synthesis, hormonal regulation, and direct and indirect defenses. Among these, phenolic compounds are commonly found in plants, but vary in the distribution of their specific compounds among plant families. Polyphenols, including anthocyanins and tannins, are widely distributed and have been well documented for their roles- primarily in plant pigmentation and also in plant defenses. However, commercialization of such compounds for use in insect pest management is severely hampered by expensive, inefficient, and time-consuming extraction protocols. Using a recently developed inexpensive …