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School Of Biological Sciences News, 2023, School Of Biological Sciences

School of Biological Sciences News

Alumni newsletter of Illinois State University's School of Biological Sciences.

Determination Of Epigallocatechin Gallate (Egcg) And Antibacterial Activities Of Commercially Available Tanzanian Green Tea (Camellia Sinensis), Raphael J Shedafa, Joseph Sempombe, Ramadhan So Nondo, Eliangiringa Kaale, Mary Temu, Peter Imming

Tanzania Journal of Science

This paper presents the results of the antibacterial activity of green tea extract (Camellia sinensis) against Staphylococcus aureus (ATCC 29213), Escherichia coli (ATCC 25922), and Klebsiella pneumoniae (ATCC 708903). Quantitative and qualitative measurements of epigallocatechin gallate (EGCG) have also been reported. The analysis by High Performance Thin Layer Chromatography (HPTLC) revealed the presence of epigallocatechin gallate (EGCG) in the green tea extracts ranging from 13.16 to 18.64 mg/g. Crude extracts GT 01–GT 03 inhibited a greater number of microorganisms and presented the lowest values of MIC against Staphylococcus aureus (0.625 mg/mL), Escherichia coli (0.625 mg/mL), and Klebsiella pneumoniae (1.25 mg/mL). …

Ethnobotanical Survey, Consumption Pattern And Genetic Conservation Of Leafy Vegetables In South-West Nigeria, Temitope O Onuminya, Michael I Osundinakin, Oluwatoyin T Ogundipe

Tanzania Journal of Science

Leafy vegetables are important in human nutrition; however, their diversity as seen in the dishes in South western Nigeria appears to be diminishing. Many popular delicacies are no longer available in the markets. Therefore, this research was conducted to identify and document leafy vegetables in South West Nigeria, assess their ethnobotanical uses from questionnaires administered to farmers/sellers, secure their genetic resource base, and improve their value chain in South-West Nigeria. Vegetable samples were collected from different local communities in five South-West states in Nigeria, identified using manual/flora, and authenticated at the University of Lagos Herbarium. One thousand respondents, 200 in …

Synthesis, Characterization And Antimicrobial Properties Of Mixed-Ligand Complexes Of Some Metal(Ii) Ions With Barbituric Acid And 1,10-Phenanthroline Ligands, Kayode Taiwo Ishola, Oluwabiyi James Olaoye, Mary Adelaide Oladipo, Omobola Ajibike Odedokun, Oyebanji Oluseun Aboyeji

Tanzania Journal of Science

Many pathogenic organisms have developed resistance to many antibiotics, which leads to an increase in the spread of many microbial infections. There is an urgent need to find more effective drugs to curb widespread transmission. Hence, this study synthesized and evaluated the antimicrobial activities of mixed-ligand complexes of Cu(II), Co(II), Ni(II), Mn(II), and Zn(II) ions with barbituric acid and 1,10 phenanthroline ligands in effort to find more effective antibiotics. The complexes were characterized using elemental analysis, metal analysis, melting points, solubility tests, and spectroscopic analyses (IR and UV-visible). The antimicrobial activities of the complexes were evaluated against two gram-positive bacteria …

Variation In Salamander Life History And Community Composition Across An Urban Gradient In Atlanta, Georgia, Usa, Leah Rittenburg

Master of Science in Integrative Biology Theses

Urbanization threatens to alter stream systems in watersheds in the eastern United States. These highly disturbed systems may result in many local extirpations of sensitive salamander species. One group of organisms that often persists in urban streams is the Eurycea bislineata (Two-lined Salamander) species complex. Many aspects of Two-lined Salamander life history are linked to environmental factors, particularly stream temperature, prey abundance, and stream hydrology. Urbanization threatens to alter these environmental factors, potentially influencing Two-lined Salamander life history. At 14 sites spanning an urban gradient in Atlanta, GA, I investigated the variation in life history and phenology in the Southern …

Alternatives To Antibiotics In Veterinary Medicine: Considerations For The Management Of Johne's Disease, Laura M. O'Connell, Aidan Coffey, Jim O'Mahony

Dept. of Biological Sciences Preprints

Antibiotic resistance has become a major health concern globally, with current predictions expecting deaths related to resistant infections to surpass those of cancer by 2050. Major efforts are being undertaken to develop derivative and novel alternatives to current antibiotic therapies in human medicine. What appears to be lacking however, are similar efforts into researching the application of those alternatives, such as (bacterio)phage therapy, in veterinary contexts. Agriculture is still undoubtedly the most prominent consumer of antibiotics, with up to 70 % of annual antibiotic usage attributed to this sector, despite policies to reduce their use in food animals. This not …

The Mayfly Newsletter, Donna Giberson

The Mayfly Newsletter

The Mayfly Newsletter is the official newsletter of the Permanent Committee of the International Conferences on Ephemeroptera.

Spatiotemporal Dynamics Of Ticks And Tick-Borne Disease At Neon Sites Across A Sub-Continental Scale, Ana Sofia Rivera

College of Science and Health Theses and Dissertations

Tick-borne diseases in humans such as Lyme disease cases in the United States have doubled between 2004 and 2016. Understanding the dynamics of infectious diseases has long been of interest for ecologists. Tick and tick-borne diseases are influenced by temperature and precipitation at local scales, indirectly through mast seeding in forest trees which increases the abundance of tick hosts (e.g., small mammals), as well as direct effects on survival. Most tick studies occur at local scales that comprise only a small part of their range. The aim of my thesis is to characterize spatiotemporal dynamics of ticks and tick-borne diseases …

Broad Host Susceptibility Of North American Amphibian Species To Batrachochytrium Salamandrivorans Suggests High Invasion Potential And Biodiversity Risk, Matthew J. Gray, Edward Davis Carter, Jonah Piovia-Scott, J. Patrick W. Cusaac, Anna C. Peterson, Ross D. Whetstone, Andreas Hertz, Aura Y. Muniz-Torres, Molly C. Bletz, Douglas C. Woodhams, John M. Romansic, William B. Sutton, Wesley Sheley, Allan Pessier, Catherine D. Mccusker, Mark Q. Wilber, Debra L. Miller

Agricultural and Environmental Sciences Faculty Research

Batrachochytrium salamandrivorans (Bsal) is a fungal pathogen of amphibians that is emerging in Europe and could be introduced to North America through international trade or other pathways. To evaluate the risk of Bsal invasion to amphibian biodiversity, we performed dose-response experiments on 35 North American species from 10 families, including larvae from five species. We discovered that Bsal caused infection in 74% and mortality in 35% of species tested. Both salamanders and frogs became infected and developed Bsal chytridiomycosis. Based on our host susceptibility results, environmental suitability conditions for Bsal, and geographic ranges of salamanders in the …

(R1954) Fractional Order On Modeling The Transmission Of Devastative Covid-19 Infection: Efficacy Of Vaccination, Ashutosh Rajput, Tanvi ., Rajiv Aggarwal, Arpana Sharma, Shiv Kumar Sahdev, Manoj Kumar, Jaimala .

Applications and Applied Mathematics: An International Journal (AAM)

The second wave of COVID-19 is an unprecedented condition in India and began in mid February 2021. Individuals who were already suffering from other comorbidities were found with lung infection, and hence, the number of disease induced deaths were rising faster during the second wave in relation to the first wave. This paper has proposed a mathematical model with fractional order derivatives by correlating the model based number of infectives with the real number of infectives in India. For the system of fractional differential equations, a disease-free state has been computed and proved to be locally asymptotically stable with certain …

(R2032) Modeling The Effect Of Sanitation Effort On The Spread Of Carrier-Dependent Infectious Diseases Due To Environmental Degradation, Ram Naresh, Sandhya Rani Verma, J. B. Shukla, Manju Agarwal

Applications and Applied Mathematics: An International Journal (AAM)

In this present study, an SIS model is proposed and analyzed to study the effect of sanitation effort in controlling the spread of carrier-dependent infectious disease in a human habitat due to environmental degradation. The dynamics of the model consist of six dependent variables, the susceptible population density, infective population density, carrier population density, cumulative density of environmental degradation and the density of sanitation effort applied on carrier population and degraded environment. In the modeling process, the carrier population density and sanitation effort are modeled logistically and the degradation of the environment is assumed to be directly proportional to the …

Promoting Rapid Vaccine Science Education At The Onset Of The Covid-19 Pandemic, Davida S. Smyth, Trace Jordan, Robert Seiser, Et Al.

All Faculty Scholarship (Archived)

At the onset of the 2019 coronavirus disease (COVID-19) pandemic, it was clear that we needed to support public education on the science of vaccines. This project was born of that need and led to the development of comprehensive educational materials that addressed the process of science, severe acute respiratory syndrome coronavirus 2 biology, vaccine development, and science communication and outreach. Called the “Online Vaccine Science Resources for COVID-19 Education,” the materials generated were designed to be implemented by educators and community groups in various contexts. They took the form of four modules and general audience informational videos available on …

Genetic Population Structure And Effective Number Of Breeders In Systems Across The Range Of The Gulf Sturgeon, Jacob Zona

Master's Theses

Gulf sturgeon (Acipenser oxyicnhus desotoi) are a large, anadromous fish belonging to an ancient lineage that diverged as early as 400 MYA. Overfishing for meat and caviar during the early 1900’s reduced their range and abundance and continued habitat destruction and mortality have limited their ability to recover, leading to their listing under the Endangered Species Act. This study uses genetic techniques to determine the effective number of breeders for multiple spawning groups of Gulf sturgeon in river systems across their range to set a baseline for tracking reproductive success of the species. Accompanying genetic information relevant to …

Newer Surveillance Data Extends Our Understanding Of The Niche Of Rickettsia Montanensis (Rickettsiales: Rickettsiaceae) Infection Of The American Dog Tick (Acari: Ixodidae) In The United States, Catherine A. Lippi, Holly D. Gaff, Robyn M. Nadolny, Sadie J. Ryan

Biological Sciences Faculty Publications

Background: Understanding the geographic distribution of Rickettsia montanensis infections in Dermacentor variabilis is important for tick-borne disease management in the United States, as both a tick-borne agent of interest and a potential confounder in surveillance of other rickettsial diseases. Two previous studies modeled niche suitability for D. variabilis with and without R. montanensis, from 2002-2012, indicating that the D. variabilis niche overestimates the infected niche. This study updates these, adding data since 2012.

Methods: Newer surveillance and testing data were used to update Species Distribution Models (SDMs) of D. variabilis, and R. montanensis infected D. variabilis, in …

Screening And Genomic Characterization Of Multi-Drug Resistant (Mdr) Bacteria From Hospital Wastewater, Showq Abdelaziz Abdelaziz

Theses

Antimicrobial resistance poses an imminent global threat to public health, with multidrug-resistant (MDR) bacteria being particularly worrisome due to their resistance to multiple antibiotics. Hospital wastewater has been identified as a potential source of MDR bacteria and antibiotic-resistant genes (ARGs). This study aimed to investigate MDR bacteria's prevalence, diversity, and genomic potential in hospital wastewater samples collected from three different hospitals in the UAE. Samples were processed for culturing antibiotic-resistant bacteria using different HiCrome™ chromogenic media to screen for ESBL-producing, Vancomycin, Carbapenem, colistin, and Methicillin-resistant bacteria. The isolates were characterized using VITEk2 antibiotic profiling and identified using 16S rRNA sequencing …

Public Health Importance Of Preventive Measures For Salmonella Tennessee And Salmonella Typhimurium Strain Lt2 Biofilms, Simen Asefaw, Sadiye Aras, Md Niamul Kabir, Sabrina Wadood, Shahid Chowdhury, Aliyar Cyrus Fouladkhah

Biology Faculty Research

Various serovars of Salmonella had been the subject of research for over 150 years; nonetheless, the bacterium has remained an important pathogen of public health concern to date. The tremendous ability of Salmonella to form biofilms on biotic and abiotic surfaces is an important underlying reason for the prevalence of this opportunistic pathogen in healthcare, manufacturing, and the food chain. The current study illustrates that using very common industrial antimicrobial treatments at the highest concentrations suggested by the manufacturers is only efficacious against planktonic and one-day mature biofilms of the pathogen while exhibiting a lack of efficacy for complete removal …

Effects Of Climate Change On Human Health, Sara El Houzaly, Richa Gupta

Publications and Research

The effects of climate change are evident worldwide as average global land and air temperatures have been rising, glaciers and ice sheets are shrinking with the concomitant rise in sea levels, extreme weather events have become more frequent, and oceans are warming and acidifying. Humanity is facing a big environmental challenge which not only impacts our habitat but will also have ramifications on our health. The present review describes a detailed examination of the scientific evidence proving the relationship between climate change and various fatal human diseases in different geographical regions. Our findings indicate that variations in the patterns of …

Identification And Initial Characterization Of Hfq-Associated Srnas In Histophilus Somni Strain 2336, Bindu Subhadra, Dianjun Cao, Roderick Jensen, Clayton Caswell, Thomas J. Inzana

Faculty Publications - Biological Sciences

Small RNAs (sRNA), in association with the global chaperone regulator Hfq, positively or negatively regulate gene expression in bacteria. For this study, Histophilus somni sRNAs that bind to Hfq were identified and then partially characterized. The Hfq-associated sRNAs in H. somni were isolated and identified by co-immunoprecipitation using anti-Hfq antibody, followed by sRNA sequencing. Sequence analysis of the sRNA samples identified 100 putative sRNAs, out of which 16 were present in pathogenic strain 2336, but not in non-pathogenic strain 129Pt. Bioinformatic analyses suggested that the sRNAs HS9, HS79, and HS97 could bind to many genes putatively involved in virulence/biofilm formation. …

Influence Of Environmental Gradients On Genomic Variation In Pediatric Commensals And Pathogens, Sanjam Sawhney

Arts & Sciences Graduate Student Theses and Dissertations

Microbes interact with humans in a myriad of ways. They come together in the human gut to form complex communities that collectively transform and individually evolve in response to changing environmental conditions. Individual microbes can also cause human infection and escape antibiotic clearance through acquisition and development of novel resistance mechanisms. In this thesis, I chronicle the relationships between microbes and humans across two axes: from complex communities to single isolates, and from targeted studies of pediatric populations vulnerable to microbiome perturbations and pathogen challenge, to broader human and animal cohorts spanning colonizing and diagnostic environments.In Chapter 2, I extensively …

The Influence Of The Gut Microbiota On Asthma In School-Aged Children And Adults, Naomi Grace Wilson

Arts & Sciences Graduate Student Theses and Dissertations

Asthma is a common respiratory disease with a highly heterogeneous pathophysiology. The human gut microbiota, comprising of all the microorganisms that inhabit the gastrointestinal tract, is linked to the development of asthma and can alter airway inflammation in animal models. The idea that the gut microbiota can have bidirectional cross-talk with the lung, such as gut dysbiosis affecting lung disease, is termed the gut-lung axis. While the gut microbiota of early life has been an area of particular interest for asthma pathogenesis research, the effect of its taxonomic and functional composition after asthma diagnosis is less clear. This dissertation employs …

Identifying Molecular Targets Of Adar1 Dependency In Breast Cancer, Sua Ryu

Arts & Sciences Graduate Student Theses and Dissertations

Innate immunity is a fundamental defense mechanism against non-self. Similar to its role in pathogenic infections, innate immunity is capable of eliminating cancerous cells by activating cytotoxic inflammatory signaling. Adenosine deaminase acting on RNA 1 (ADAR1) is a key regulator of cell-intrinsic innate immunity. ADAR1 converts adenosines to inosines on double-stranded RNAs (dsRNAs), altering dsRNA structure and its interactive properties. This suppresses cytoplasmic sensing of immunogenic dsRNA and activation of the type I interferon (IFN) signaling pathway. Frequently, suppressing endogenous dsRNA from triggering cytotoxic inflammatory signaling is essential for cancer cell survival. This is known as ADAR1 dependency, which has …

Individual And Social Influences On Cigarette Smoking During Pregnancy, Alexandra Noel Houston-Ludlam

Arts & Sciences Graduate Student Theses and Dissertations

Population-level trends on sociodemographic risk factors for cigarette smoking during pregnancy (SDP) and outcomes for offspring exposed to maternal SDP are well established. However, the more complex task of understanding individual risk-prediction, including differences by maternal race/ethnicity, and its clinical application, remains incomplete. Characterizing the relative influence of environmental and individual characteristics as risk or protective factors for continued SDP is a necessary next step for informing individual- and public health-level interventions to produce successful smoking cessation prior to pregnancy, substantially reducing smoking-related mortality in child-bearing people. In this dissertation, I wanted to explore how multiple levels of influence, from …

The Microbes Within: Pathogen In-Host Adaptation And The Gut Microbiome During Persistent Colonization And Recurrent Infection, Joohee Choi

Arts & Sciences Graduate Student Theses and Dissertations

Microbes not just surround us; they are inside of us. The gut microbiome has emerged in recent years as an important modulator of health and is thought to have co-evolved with us throughout evolutionary history. On the other hand, our immune systems are constantly surveilling and battling infection by external pathogens— some of which still manage to evade our immune response and colonize our bodies long-term. In this Thesis, I investigated microbes inhabiting our bodies in various contexts to understand their impact on human health.In Chapter 2, I discuss the effects of fecal microbiome transplant (FMT) study drug RBX2660 on …

Evaluating The Impact Of Temperature And Artificial Light At Night On The Growth, Swimming Performance, And Corticosterone Levels Of Southern Leopard Frog (Lithobates Sphenocephalus) Tadpoles, Skylar Alexander

Honors Theses

Anthropogenic activities caused by urbanization have considerably altered our world’s ecosystems which has led to a global amphibian population decline. Encroaching and unyielding urbanization by humans has contributed to a rise in artificial light at night due to light pollution as well as increased temperature due to climate change. Both rising temperatures and artificial light at night (ALAN) have been shown to individually have negative effects on amphibian physiology such as increased stress and decreased behavior. However, due to the drastic nature of human imposition, amphibians typically encounter these anthropogenic stressors in combination. Therefore, it is important to understand how …

Host-Acquired Virus Genes Support An Ancient Antiviral Role Of The Pirna Pathway In Dipterans, Rebecca Christian

Theses and Dissertations

Endogenous viral elements (EVEs) have been recently investigated as a source of transgenerational immune memory. These “viral fossils” are abundant in Aedes mosquitoes and partner with the host’s primary antiviral defense system, the RNA interference (RNAi) pathways. This partnership appears unique to mosquitoes, which encode an expansion of the Piwi endoribonucleases. To interrogate EVE-Piwi partnerships and their role in antiviral defense, I performed a comparative small RNA analysis of two naturally occurring EVE-virus pairs – one in the mosquito Aedes albopictus, and one in the midge Chaoborus americanus. Both express an EVE related to the nucleoprotein of their …

Elucidating The Impact Of Sos-Response Timing In On Escherichia Coli Survival Following Treatment With Fluoroquinolone Topoisomerase Inhibitors, Stephanie Schofield

Honors Scholar Theses

Antibiotic treatment failure is a public health crisis, with a 2019 report stating that roughly 35,000 deaths occur in the United States yearly due to bacterial infections that are unresponsive to antibiotics (1). One complication in the treatment of bacterial infection is antibiotic persistence which further compromises our battle to effectively treat infection. Bacterial persisters can exist in clonal bacterial cultures and can tolerate antibiotic treatment by undergoing reversible phenotypic changes. They can survive drug concentrations that their genetically identical kin cannot. Some persisters remain in a slow growing state and are difficult to target with current antibiotics. A specific …

Lessons From Chloroviruses: The Complex And Diverse Roles Of Viruses In Food Webs, John Delong, James L. Van Etten, David Dunigan

School of Biological Sciences: Faculty Publications

Viruses can have large effects on the ecological communities in which they occur. Much of this impact comes from the mortality of host cells, which simultaneously alters microbial community composition and causes the release of matter that can be used by other organisms. However, recent studies indicate that viruses may be even more deeply integrated into the functioning of ecological communities than their effect on nutrient cycling suggests. In particular, chloroviruses, which infect chlorella-like green algae that typically occur as endosymbionts, participate in three types of interactions with other species. Chlororviruses (i) can lure ciliates from a distance, using them …

Disease Prevalence And Selenium Bioaccumulation In Northern Leopard Frogs (Lithobates Pipiens), Emily B. Eisenbraun

Honors Thesis

Most amphibians are becoming imperiled in today’s world via environmental contamination and emerging infectious diseases. This project's main objective was to determine the relationship between the prevalence of Ranavirus and selenium bioaccumulation in amphibians in South Dakota. I selected northern leopard frogs (Lithobates pipiens) to focus on specifically because they are susceptible to Ranavirus and are found ubiquitously throughout eastern South Dakota wetlands. The secondary objective of this project was to determine if disease prevalence was correlated with areas of agricultural runoff in South Dakota’s prairie pothole wetlands. Intensive field sampling was conducted across five wetlands in Eastern South Dakota …

An Overview Of Viruses And The Infamous Sars-Cov-2, Jake Sun

The Confluence

Background information on viruses is first presented which include topics like evolution, ecology, history, identification, structure, and application. The novel SARS-CoV-2, which causes COVID-19, pandemic originated in Wuhan, China in December 2019. Millions of people were infected with the virus in a short time period causing urgent concern worldwide. The purpose of this review is to provide a brief and general understanding of the SARS-CoV-2 to increase awareness and actions toward preventive measures. COVID-19 is a (+) ssRNA spherical enveloped virion that causes primarily respiratory illnesses. The S protein interacts with ACE-2 receptors on the host cell to gain entry …

Relationships Between Vector Mosquitoes And Climate Change Derived From Long Term Ecological Data In The United States, Nicholas Scott

Honors Program Theses and Projects

Climate change has significant ecological and societal consequences as evident from the past few decades. It has had a large impact on many species, including vector mosquitoes. Although how climate change impacts mosquitoes of the tropical world has been explored, temperate areas remain inadequately studied. Therefore, the medical and healthcare sectors are underprepared for treating mosquito-borne diseases (EEE and Western Nile virus). Based on a long-term ecological dataset covering the past ~10 years across 45 sites, we streamlined, processed, and subsequently analyzed data by building statistical models to understand changes among mosquito populations in the US in response to climate …