Digital Commons Network^™

A Comparison Of Behavioural Change In Drosophila During Exposure To Thermal Stress, Angel G. Fasolo, Robert A. Krebs

Biological, Geological, and Environmental Faculty Publications

In order to understand how adaptive tolerance to stress has evolved, we compared related species and populations of Drosophila for a variety of fitness relevant traits while flies directly experienced the stress. Two main questions were addressed. First, how much variation exists in the frequency of both courtship and mating among D. melanogaster, D. simulans, and D. mojavensis when each are exposed to a range of temperatures? Second, how does variation in these same behaviours compare among four geographically isolated populations of D. mojavensis, a desert species with a well defined ecology? Our hierarchical study demonstrated that mating success under …

Evidence That Thyroid Hormone Induces Olfactory Cellular Proliferation In Salmon During A Sensitive Period For Imprinting, Sean C. Lema, Gabrielle A. Nevitt

Biological Sciences

Salmon have long been known to imprint and home to natal stream odors, yet the mechanisms driving olfactory imprinting remain obscure. The timing of imprinting is associated with elevations in plasma thyroid hormone levels, with possible effects on growth and proliferation of the peripheral olfactory system. Here, we begin to test this idea by determining whether experimentally elevated plasma levels of 3,5,3′-triiodothyronine (T₃) influence cell proliferation as detected by the 5-bromo-2′-deoxyuridine (BrdU) cell birth-dating technique in the olfactory epithelium of juvenile coho salmon (Oncorhynchus kisutch). We also explore how natural fluctuations in thyroxine (T₄) …

Renesting Decisions And Annual Fecundity Of Female Dickcissels (Spiza Americana) In Illinois, Jeffrey W. Walk, Kevin Wentworth, Eric L. Kershner, Eric K. Bollinger, Richard E. Warner

Faculty Research & Creative Activity

ABSTRACT.-Renesting decisions and annual fecundity are crucial for interpreting other demographic information, yet are infrequently reported. We used radiotelemetry to monitor female Dickcissels (Spiza americana) throughout the 1999 and 2000 breeding seasons in southeastern Illinois. Overall fecundity (regardless of whether females remained in the study area throughout the breeding season) was 0.61 ± 0.13 female fledglings per year. Of females that remained within the study area, 94% fledged young (1.25 ± 0.15 female fledglings per year). Most females (62%) that experienced nest failure emigrated from the study area (moved >10 km) in 2.8 ± 0.6 days; others (36%) initiated subsequent …

Renesting Decisions And Annual Fecundity Of Female Dickcissels (Spiza Americana) In Illinois, Jeffrey Walk, Kevin Wentworth, Eric Kershner, Eric Bollinger, Richard Warner

Faculty Research & Creative Activity

ABSTRACT.-Renesting decisions and annual fecundity are crucial for interpreting other demographic information, yet are infrequently reported. We used radiotelemetry to monitor female Dickcissels (Spiza americana) throughout the 1999 and 2000 breeding seasons in southeastern Illinois. Overall fecundity (regardless of whether females remained in the study area throughout the breeding season) was 0.61 ± 0.13 female fledglings per year. Of females that remained within the study area, 94% fledged young (1.25 ± 0.15 female fledglings per year). Most females (62%) that experienced nest failure emigrated from the study area (moved >10 km) in 2.8 ± 0.6 days; others (36%) initiated subsequent …

Complete Genomic Sequence Of Bacteriophage B3, A Mu-Like Phage Of Pseudomonas Aeruginosa, Michael D. Braid, Jennifer L. Silhavy, Christopher L. Kitts, Raul J. Cano, Martha M. Howe

Biological Sciences

Bacteriophage B3 is a transposable phage of Pseudomonas aeruginosa. In this report, we present the complete DNA sequence and annotation of the B3 genome. DNA sequence analysis revealed that the B3 genome is 38,439 bp long with a G+C content of 63.3%. The genome contains 59 proposed open reading frames (ORFs) organized into at least three operons. Of these ORFs, the predicted proteins from 41 ORFs (68%) display significant similarity to other phage or bacterial proteins. Many of the predicted B3 proteins are homologous to those encoded by the early genes and head genes of Mu and Mu-like prophages found …

Facultative Altitudinal Movements By Mountain White-Crowned Sparrows (Zonotrichia Leucophrys Oriantha) In The Sierra Nevada, Thomas P. Hahn, Keith W. Sockman, Creagh W. Breuner, Martin L. Morton

Biological Sciences Faculty Publications

Mountain White-crowned Sparrows (Zonotrichia leucophrys oriantha) winter in Mexico and often arrive in the vicinity of their breeding grounds in the Sierra Nevada well before nesting is possible. Arrival at Tioga Pass, Califomia (elevation 3,030 m), usually occurs in early May, but residual winter snow and adverse weather can delay nesting for weeks. We used radiotelemetry to determine whether prebreeding Mountain White-crowned Sparrows engaged in weather-related altitudinal movements during the waiting period between the end of spring migration and onset of breeding during 1995-2001, with a range of residual winter snowpacks. Interannual variation in arrival date and onset …

Growth Of Stygobitic (Orconectes Australis Packardi) And Epigean (Orconectes Cristavarius) Crayfishes Maintained In Laboratory Conditions, Ann-Simone Cooper, Robin L. Cooper

Biology Faculty Publications

This study reports on maintenance and growth of the cave crayfish, Orconectes australis packardi, and the epigean crayfish, Orconectes cristavarius, with laboratory conditions for 1 and 2 years. The O. a. packardi survived well compared to the O. cristavarius in captivity. The poor survival of the epigean species was probably due to unsuitable conditions. The epigean as well as the cave crayfish molted and grew in captivity, but without any significant difference in molt frequency between species. In the first year, total body length was obtained to assay growth, whereas in the second year the more accurate measure …

Human Stick Balancing: Tuning Lèvy Flights To Improve Balance Control, Juan Luis Cabrera, John Milton

WM Keck Science Faculty Papers

State-dependent, or parametric, noise is an essential component of the neural control mechanism for stick balancing at the fingertip. High-speed motion analysis in three dimensions demonstrates that the controlling movements made by the fingertip during stick balancing can be described by a Lévy flight. The Lévy index, , is approximately 0.9; a value close to optimal for a random search. With increased skill, the index does not change. However, the tails of the Lévy distribution become broader. These observations suggest a Lévy flight that is truncated by the properties of the nervous and musculoskeletal system; the truncation decreasing as skill …

Visualizing Early Frog Development With Motion-Sensitive 3-D Optical Coherence Microscopy, Richard C. Haskell, Mary E. Williams, Daniel C. Petersen, Barbara M. Hoeling, Andrew J. Schile, J. D. Pennington, M. G. Seetin, J. M. Castelaz, Scott E. Fraser, Cyrus Papan, Hongwu Ren, Johannes F. De Boer, Zhongping Chen

All HMC Faculty Publications and Research

A motion-sensitive en-face-scanning 3-D optical coherence microscope (OCM) has been designed and constructed to study critical events in the early development of plants and animals. We describe the OCM instrument and present time-lapse movies of frog gastrulation, an early developmental event in which three distinct tissue layers are established that later give rise to all major organ systems. OCM images constructed with fringe-amplitude data show the mesendoderm migrating up along the blastocoel roof, thus forming the inner two tissue layers. Motion-sigma data, measuring the random motion of scatterers, is used to construct complementary images that indicate the presence of Brownian …

The Bvg Virulence Control System Regulates Biofilm Formation In Bordetella Bronchiseptica, Yasuhiko Irie, Seema Mattoo, Ming H. Yuk

Biology Faculty Publications

Bordetella species utilize the BvgAS (Bordetella virulence gene) two-component signal transduction system to sense the environment and regulate gene expression among at least three phases: a virulent Bvg⁺ phase, a nonvirulent Bvg⁻ phase, and an intermediate Bvgⁱ phase. Genes expressed in the Bvg⁺ phase encode known virulence factors, including adhesins such as filamentous hemagglutinin (FHA) and fimbriae, as well as toxins such as the bifunctional adenylate cyclase/hemolysin (ACY). Previous studies showed that in the Bvgⁱ phase, FHA and fimbriae continue to be expressed, but ACY expression is significantly downregulated. In this report, we determine …

Response Of Brood-Parasitic Bronzed Cowbird To Playback Of The Song Of Audubon's Oriole, Steven G. Monk, Timothy Brush

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

ABSTRACT—In the Lower Rio Grande Valley of South Texas, Audubon’s orioles (Icterus graduacauda) have declined substantially in the past 50 y, probably due to habitat loss, fragmentation, and brood parasitism by bronzed cowbirds (Molothrus aeneus). Tape playback of the song of Audubon’s oriole, originally intended to better survey the oriole, also attracted bronzed cowbirds. Bronzed cowbirds flew silently into the nearest tree in 14.1% of 234 playbacks, whereas Audubon’s orioles responded vocally or flew toward the recorder in 15.8% of playbacks. Bronzed cowbirds might use vocalizations of Audubon’s oriole as a cue to find breeding pairs or nests of this …

Cholinergic Modulation Of The Locomotor Network In The Lamprey Spinal Cord, Katharina A. Quinlan, Peter G. Placas, James T. Buchanan

Biological Sciences Faculty Research and Publications

Acetylcholine (ACh) was found here to be a strong modulator of swimming activity in the isolated spinal cord preparation of the adult lamprey (Ichthyomyzon unicuspis). During fictive swimming induced with either D-glutamate or N-methyl-D-aspartate, addition of ACh (200 µM) significantly reduced the cycle period of ventral root bursts to 54%, intersegmental phase lag to 32%, and ventral root burst proportion to 80% of control levels. Effects of ACh were apparent at concentrations as low as 1 µM. Both nicotinic and muscarinic receptors are involved, in that application of either nicotinic or muscarinic agonists alone significantly reduced cycle …

Reticulospinal Neurons Receive Direct Spinobulbar Inputs During Locomotor Activity In Lamprey, James F. Einum, James T. Buchanan

Biological Sciences Faculty Research and Publications

Reticulospinal neurons of the lamprey brain stem receive rhythmic input from the spinal cord during locomotor activity. The goal of the present study was to determine whether such spinal input has a direct component to reticulospinal neurons or depends on brain stem interneurons. To answer this question, an in vitro lamprey brain stem-spinal cord preparation was used with a diffusion barrier placed caudal to the obex, separating the experimental chamber into two baths. Locomotor activity was induced in the spinal cord by perfusion of D-glutamate or N-methyl-DL-aspartate into the spinal cord bath. The brain stem bath was first perfused …

Testing Species Boundaries In An Ancient Species Complex With Deep Phylogeographic History: Genus Xantusia (Squamata: Xantusiidae), Keith A. Crandall, Elizabeth A. Sinclair, Robert L. Bezy, Kathryn Bolles, Jose L. Camarillo, Jack W. Sites

Faculty Publications

Identification of species in natural populations has recently received increased attention with a number of investigators proposing rigorous methods for species delimitation. Morphologically conservative species (or species complexes) with deep phylogenetic histories (and limited gene flow) are likely to pose particular problems when attempting to delimit species, yet this is crucial to comparative studies of the geography of speciation. We apply two methods of species delimitation to an ancient group of lizards (genus Xantusia) that occur throughout southwestern North America. Mitochondrial cytochrome b and nicotinamide adenine dinucleotide dehydrogenase subunit 4 gene sequences were generated from samples taken throughout the geographic …

Woodland Amphibian Distribution In Parks And Greenspaces Of The Portland, Oregon Metropolitan Area: A Multiple Scale Investigation, Laura A. Roberts

Dissertations and Theses

Loss of biodiversity due to habitat fragmentation is worldwide problem. With growing human populations and increasing urbanization, it is a necessity to conduct studies on wildlife occurring in urban areas. Currently there is a deficit of research investigating woodland amphibians in urban environments. My objectives were to describe amphibian species richness and abundance in the Portland, Oregon, Metropolitan region, and relate patterns of variation to variables at three increasingly large spatial scales: 1) local microenvironmental (i.e. amphibian/substrate interaction), (2) macrohabitat/patch (i.e. park or greenspace), and 3) landscape (surrounding parks and greenspaces). Environmental variables occurring within the three spatial scales were …

Synaptic Transformations Underlying Highly Selective Auditory Representations Of Learned Birdsong, Melissa J. Coleman, Richard Mooney

WM Keck Science Faculty Papers

Stimulus-specific neuronal responses are a striking characteristic of several sensory systems, although the synaptic mechanisms underlying their generation are not well understood. The songbird nucleus HVC (used here as a proper name) contains projection neurons (PNs) that fire temporally sparse bursts of action potentials to playback of the bird's own song (BOS) but are essentially silent when presented with other acoustical stimuli. To understand how such remarkable stimulus specificity emerges, it is necessary to compare the auditory-evoked responsiveness of the afferents of HVC with synaptic responses in identified HVC neurons. We found that inactivating the interfacial nucleus of the nidopallium …

Sinusoidal Length Oscillation- And Receptor-Mediated Mrna Expression Of Myosin Isoforms And Α-Sm Actin In Airway Smooth Muscle, Melissa Wahl, Thomas J. Eddinger, Chi-Ming Hai

Biological Sciences Faculty Research and Publications

We tested the hypothesis that sinusoidal length oscillation and receptor activation interactively regulate the abundance of mRNA encoding α-smooth muscle (α-SM) actin and myosin isoforms in intact bovine tracheal smooth muscle. We found that sinusoidal length oscillation significantly downregulated abundance of mRNA encoding α-SM actin mRNA in unstimulated tissues but not in histamine- and carbachol-activated tissues. This observation suggests antagonistic interactions between mechanical stretch and receptor-mediated signal transduction in regulating the abundance of mRNA encoding α-SM actin in intact airway smooth muscle. This pattern of antagonistic interaction was also observed in cholinergic receptor activation experiments. Whereas carbachol significantly upregulated myosin …

From Biomedicine To Natural History Research: Est Resources For Ambystomatid Aalamanders, Srikrishna Putta, Jeramiah J. Smith, John A. Walker, Mathieu Rondet, David W. Weisrock, James Monaghan, Amy K. Samuels, D. Kevin Kump, David C. King, Nicholas J. Maness, Bianca Habermann, Elly Tanaka, Susan V. Bryant, David M. Gardiner, David M. Parichy, S. Randal Voss

Biology Faculty Publications

BACKGROUND: Establishing genomic resources for closely related species will provide comparative insights that are crucial for understanding diversity and variability at multiple levels of biological organization. We developed ESTs for Mexican axolotl (Ambystoma mexicanum) and Eastern tiger salamander (A. tigrinum tigrinum), species with deep and diverse research histories.

RESULTS: Approximately 40,000 quality cDNA sequences were isolated for these species from various tissues, including regenerating limb and tail. These sequences and an existing set of 16,030 cDNA sequences for A. mexicanum were processed to yield 35,413 and 20,599 high quality ESTs for A. mexicanum and A. t. tigrinum, respectively. Because the …

Determining Rates Of Change And Evaluating Group-Level Resiliency Differences In Hyporheic Microbial Communities In Response To Fluvial Heavy-Metal Deposition, Kevin P. Feris, Philip W. Ramsey, Matthias Rillig, Johnnie N. Moore, James E. Gannon, William E. Holben

Biological Sciences Faculty Publications

Prior field studies by our group have demonstrated a relationship between fluvial deposition of heavy metals and hyporheic-zone microbial community structure. Here, we determined the rates of change in hyporheic microbial communities in response to heavy-metal contamination and assessed group-level differences in resiliency in response to heavy metals. A controlled laboratory study was performed using 20 flowthrough river mesocosms and a repeated-measurement factorial design. A single hyporheic microbial community was exposed to five different levels of an environmentally relevant metal treatment (0, 4, 8, 16, and 30% sterilized contaminated sediments). Community-level responses were monitored at 1, 2, 4, 8, and …

The Mayfly Newsletter, Peter M. Grant

The Mayfly Newsletter

The Mayfly Newsletter is the official newsletter of the Permanent Committee of the International Conferences on Ephemeroptera.

Mechanism Of Chromium Reduction Of Benzo[A]Pyrene Diolepoxide Mutagenesis In Human Fibroblasts, Cara Suzanne Kriss

Masters Theses

Environmental agents can cause an increase in cellular stress and damage DNA which can lead to diseases such as cancer. Chromium produces cellular stress by increasing the reactive oxygen species through a Fenton-like reaction, where chromium reacts with hydrogen peroxide to form hydroxyl radicals. Benzo[ a ]pyrene is an environmental carcinogen that is metabolized by cytochrome p450 enzymes into benzo[a]pyrene diolepoxide (BPDE). BPDE is highly reactive with DNA producing large DNA-adducts primarily on guanine nucleotides. The primary intracellular pathway by which mammalian cells remove damaged DNA caused by bulky mutagens is nucleotide excision repair. We have found that, in BPDE …

Pf15p Is The Chlamydomonas Homologue Of The Katanin P80 Subunit And Is Required For Assembly Of Flagellar Central Microtubules, Erin E. Dymek, Paul A. Lefebvre, Elizabeth F. Smith

Dartmouth Scholarship

Numerous studies have indicated that the central apparatus plays a significant role in regulating flagellar motility, yet little is known about how the central pair of microtubules or their associated projections assemble. Several Chlamydomonas mutants are defective in central apparatus assembly. For example, mutant pf15 cells have paralyzed flagella that completely lack the central pair of microtubules. We have cloned the wild-type PF15 gene and confirmed its identity by rescuing the motility and ultrastructural defects in two pf15 alleles, the original pf15a mutant and a mutant generated by insertional mutagenesis. Database searches using the 798-amino-acid polypeptide predicted from the complete …

Agribusiness Sheep Updates - 2004 Part 3, Ken Hart, Keith Croker, Rob Davidson, Mario D'Antuono, Evan Burt, Tanya Kilminster, Diana Fedorenko, Darryl Mcclements, Robert Beard, Sandy Turton, Martin Atwell, Robert Beard

Sheep Updates

Posters Can Merino Ewes be Teased to Synchronise Oestrus for a Summer/Autumn Mating? Ken Hart, Keith Croker, Department of Agriculture Western Australia, Rob Davidson, School of Animal Biology, University of Western Australia. Mario D'Antuono, Department of Agriculture Western Australia Damara Sheep: Now Looking Domestic Evan Burt and Tanya Kilminster, Department of Agriculture Western Australia Production and Water Use of Lucerne and French Serradella Under Three Sowing Rates Diana Fedorenko1,4, Darryl McClements1,4 , Robert Beard3,4 1Department of Agriculture, 3 Farmer, Meckering, 4CRC for Plant-based Management of Dryland Salinity. E-SHEEP - Individual Animal Management is here Sandy Turton & Martin Atwell, Department …

The Assessment Of Antibiotic Resistance And Detection Of Class 1 And Class 2 Integrons In Fecal Coliform Bacteria Isolated From The Triplett Creek Watershed, Rowan County, Kentucky, Tina Howard Ousley

Morehead State Theses and Dissertations

A thesis presented to the faculty of the College of Science and Technology at Morehead State University in partial fulfillment of the requirements for the Degree of Master of Science by Tina Howard Ousley on July 15, 2004.

Zapus Princeps, E. Blake Hart, Mark C. Belk, Eralee Jordan, Malinda W. Gonzalez

Faculty Publications

Zapus princeps Allen, 1893:71. Type locality “Florida, La Plata Co., Colorado.”
Zapus pacificus Merriam, 1897:104. Type locality “Prospect, Rogue River Valley, Jackson Co., Oregon.”
Zapus saltator Allen, 1899:3. Type locality “Telegraph Creek, British Columbia.”

Responses Of Nesting Bobolinks (Dolichonyx Oryzivorus) To Habitat Edges, Eric K. Bollinger, Thomas A. Gavin

Faculty Research & Creative Activity

T.-Avoidance of habitat edges may be contributing to reduced densities of grass- land birds in small habitat patches. Nest densities for grassland-nesting Bobolinks (Dolichonyx oryzivorus) were much lower than expected within 25 m of forest edges at three sites in New York, and that pattern ("edge avoidance") extended to 100 m at one site. Nests located within 50 m of forest or wooded hedgerow edges had lower daily survival rates, compared with nests >100 m from any habitat edge. Bobolinks tended to move away from forest edges when renest- ing after nest failure; that pattern was especially evident in females …

Responses Of Nesting Bobolinks (Dolichonyx Oryzivorus) To Habitat Edges, Eric Bollinger, Thomas Gavin

Faculty Research & Creative Activity

T.-Avoidance of habitat edges may be contributing to reduced densities of grass- land birds in small habitat patches. Nest densities for grassland-nesting Bobolinks (Dolichonyx oryzivorus) were much lower than expected within 25 m of forest edges at three sites in New York, and that pattern ("edge avoidance") extended to 100 m at one site. Nests located within 50 m of forest or wooded hedgerow edges had lower daily survival rates, compared with nests >100 m from any habitat edge. Bobolinks tended to move away from forest edges when renest- ing after nest failure; that pattern was especially evident in females …

Immunoglobulin Heavy-Chain Receptor Editing Is Observed In The Nod/Scid Model Of Human B-Cell Development, G. R. Kolar, J. D. Capra

Biological Sciences Faculty Research & Creative Works

Receptor editing and receptor revision are the two mechanisms of antibody diversity that result in either complete V-gene replacement or the formation of hybrid V genes. We do not yet understand how this process unfolds, because they are rare and difficult to study in vivo. In this study, we describe a family of VH4-34:VH4-61 hybrids isolated from a human B-cell chimeric non-obese diabetic/severe combined immunodeficient mouse. The observation of hybrid immunoglobulin sequences in human B cells that developed in this model system makes it useful for the study of this mechanism of diversification and tolerance.

Immunoglobulin Heavy-Chain Receptor Editing Is Observed In The Nod/Scid Model Of Human B-Cell Development, G. R. Kolar, J. D. Capra

Biological Sciences Faculty Research & Creative Works

Receptor editing and receptor revision are the two mechanisms of antibody diversity that result in either complete V-gene replacement or the formation of hybrid V genes. We do not yet understand how this process unfolds, because they are rare and difficult to study in vivo. In this study, we describe a family of VH4-34:VH4-61 hybrids isolated from a human B-cell chimeric non-obese diabetic/severe combined immunodeficient mouse. The observation of hybrid immunoglobulin sequences in human B cells that developed in this model system makes it useful for the study of this mechanism of diversification and tolerance.

Responses Of Nesting Bobolinks (Dolichonyx Oryzivorus) To Habitat Edges, Eric K. Bollinger, Thomas A. Gavin

Faculty Research & Creative Activity

ABSTRACT.-Avoidance of habitat edges may be contributing to reduced densities of grassland birds in small habitat patches. Nest densities for grassland-nesting Bobolinks (Dolichonyx oryzivorus) were much lower than expected within 25m of forest edges at three sites in New York, and that pattern ("edge avoidance") extended to 100m at one site. Nests located within 50 m of forest or wooded hedgerow edges had lower daily survival rates, compared with nests >100m from any habitat edge. Bobolinks tended to move away from forest edges when renesting after nest failure; that pattern was especially evident in females that placed their first nest …