Digital Commons Network^™

Lateralization Of The Developing Rat Hippocampal Formation, Amanda Lynn Gross

Biology ETDs

Differences between the left and right hemisphere of the brain have been observed in humans and rodents (Broca, 1861; Wernicke, 1881), including the hippocampal formation, a region of the brain that is necessary for some forms of learning and memory (Olton and Samuelson, 1976; deToledo-Morrell et al., 1988; Bernasconi-Guastalla et al., 1994; Tabibnia et al., 1994; Poe et al., 2000; Lister et al., 2006; Hanlon et al., 2005; Sommer et al., 2005; Moskal et al., 2006; Thompson et al., 2008; Klur et al., 2009). Although lateralization of the hippocampal formation has been studied in the adult, few have sought to …

The Nih-Niaid Filariasis Research Reagent Resource Center, Michelle L. Michalski, Kathryn G. Griffiths, Steven A. Williams, Ray M. Kaplan, Andrew Moorhead

Biological Sciences: Faculty Publications

Filarial worms cause a variety of tropical diseases in humans; however, they are difficult to study because they have complex life cycles that require arthropod intermediate hosts and mammalian definitive hosts. Research efforts in industrialized countries are further complicated by the fact that some filarial nematodes that cause disease in humans are restricted in host specificity to humans alone. This potentially makes the commitment to research difficult, expensive, and restrictive. Over 40 years ago, the United States National Institutes of Health–National Institute of Allergy and Infectious Diseases (NIH-NIAID) established a resource from which investigators could obtain various filarial parasite species …

Phylogenomics Of Reichenowia Parasitica, An Alphaproteobacterial Endosymbiont Of The Freshwater Leech Placobdella Parasitica, Sebastian Kvist, Apurva Narechania, Alejandro Oceguera-Figueroa, Bella Fuks, Mark E. Siddall

Publications and Research

Although several commensal alphaproteobacteria form close relationships with plant hosts where they aid in (e.g.,) nitrogen fixation and nodulation, only a few inhabit animal hosts. Among these, Reichenowia picta, R. ornata and R. parasitica, are currently the only known mutualistic, alphaproteobacterial endosymbionts to inhabit leeches. These bacteria are harbored in the epithelial cells of the mycetomal structures of their freshwater leech hosts, Placobdella spp., and these structures have no other obvious function than housing bacterial symbionts. However, the function of the bacterial symbionts has remained unclear. Here, we focused both on exploring the genomic makeup of R. parasitica and on …

Insulin Receptor-Mediated Signaling Via Phospholipase C-Γ Regulates Growth And Differentiation In Drosophila, Juan M. Murillo-Maldonado, Fouad Bou Zeineddine, Rachel Stock, Justin Thackeray, Juan R. Riesgo-Escovar

Biology

Coordination between growth and patterning/differentiation is critical if appropriate final organ structure and size is to be achieved. Understanding how these two processes are regulated is therefore a fundamental and as yet incompletely answered question. Here we show through genetic analysis that the phospholipase C-γ (PLC-γ) encoded by small wing (sl) acts as such a link between growth and patterning/differentiation by modulating some MAPK outputs once activated by the insulin pathway; particularly, sl promotes growth and suppresses ectopic differentiation in the developing eye and wing, allowing cells to attain a normal size and differentiate properly. sl mutants have previously been …

Shifting Species Interactions In Terrestrial Dryland Ecosystems Under Altered Water Availability And Climate Change, Kevin E. Mccluney, Jayne Belnap, Scott L. Collins, Angélica L. González, Elizabeth M. Hagen, J. Nathaniel Holland, Burt P. Kotler, Fernando T. Maestre, Stanley D. Smith, Blair O. Wolf

Biological Sciences Faculty Publications

No abstract provided.

Parathyroid Hormone-Related Protein Is Not Required For Normal Ductal Or Alveolar Development In The Post-Natal Mammary Gland, Kata Boras-Granic, Joshua Vanhouten, Minoti Hiremath, John Wysolmerski

Biology Faculty Publications and Presentations

PTHrP is necessary for the formation of the embryonic mammary gland and, in its absence, the embryonic mammary bud fails to form the neonatal duct system. In addition, PTHrP is produced by the breast during lactation and contributes to the regulation of maternal calcium homeostasis during milk production. In this study, we examined the role of PTHrP during post-natal mammary development. Using a PTHrP-lacZ transgenic mouse, we surveyed the expression of PTHrP in the developing post-natal mouse mammary gland. We found that PTHrP expression is restricted to the basal cells of the gland during pubertal development and becomes expressed in …

Migration And Invasion Of Brain Tumors, Richard A. Able, Jr., Veronica Dudu, Maribel Vazquez

Publications and Research

Recent advances in molecular biology have led to new insights in the development, growth and infiltrative behaviors of primary brain tumors (Demuth and Berens, 2004; Huse and Holland, 2010; Johnson et al., 2009; Kanu et al., 2009). These tumors are derived from various brain cell lineages and have been historically classified on the basis of morphological and, more recently, immunohistochemical features with less emphasis on their underlying molecular pathogenesis (Huse and Holland, 2010). The detailed molecular characterization of brain tumors has laid the groundwork for augmentation of standard treatment with patient-specific designed targeted therapies (Johnson et al., 2009; Kanu et …

Climate Change, Body Size, And Phenotype Dependent Dispersal, Shannon J. Mccauley, Karen E. Mabry

Biological Sciences

No abstract provided.

Genetics Of Coxiella Burnetii: On The Path Of Specialization, Michael F. Minnick, Rahul Raghavan

Biological Sciences Faculty Publications

Coxiella burnetii is an extremely infectious, zoonotic agent that causes Q fever in humans. With the exception of New Zealand, the bacterium is distributed worldwide. Coxiella is classified as a select agent based on its past and potential use as a bioweapon and its threat to public health. Despite decades of research, we know relatively little regarding Coxiella?s molecular pathogenesis, and a vaccine is not widely available. This article briefly reviews the unusual genetics of C. burnetii; a pathogen that retains telltale genetic mementos collected over the course of its evolutionary path from a free-living bacterium to an obligate intracellular …

Spinal Locomotor Inputs To Individually Identified Reticulospinal Neurons In The Lamprey, James T. Buchanan

Biological Sciences Faculty Research and Publications

Locomotor feedback signals from the spinal cord to descending brain stem neurons were examined in the lamprey using the uniquely identifiable reticulospinal neurons, the Müller and Mauthner cells. The same identified reticulospinal neurons were recorded in several preparations, under reduced conditions, to address whether an identified reticulospinal neuron shows similar locomotor-related oscillation timing from animal to animal and whether these timing signals can differ significantly from other identified reticulospinal neurons. Intracellular recordings of membrane potential in identified neurons were made in an isolated brain stem-spinal cord preparation with a high-divalent cation solution on the brain stem to suppress indirect neural …

Alarm-Calling And Response Behaviors Of The Black-Tailed Prairie Dog In Kansas, Lloyd W. Towers Iii

Master's Theses or Doctor of Nursing Practice

Prairie dogs (Cynomys spp.) use alarm calls to warn offspring and other kin of predatory threats. Dialects occur when vocalizations contain consistent differences among populations not isolated by geographic barriers. The Gunnison’s prairie dog (C. gunnisoni) has dialects in its alarm calls. The objectives of my study were to: (1) assess if the black-tailed prairie dog (C. ludovicianus) responded differently to alarm calls from other colonies than it did to alarm calls from its own colony, and (2) detect dialects, if they existed, in the alarm calls of the black-tailed prairie dog. The study included 8 black-tailed prairie dog colonies …

Gravesoil Microbial Community Structure During Carcass Decomposition, Amy E. Maile

Department of Entomology: Dissertations, Theses, and Student Research

Dead bodies placed on soil represent unique challenges for investigators. Although processes in soils can be used to estimate postmortem interval, we know very little about how carcasses and insects affect gravesoil microbial communities.

To address this, the current project was composed of two experiments. Experiment one was conducted to investigate the effect of surface type on carcass decomposition and evaluate soil ecology methods. Experiment two was conducted to investigate the presence of an insect population (Lucilia sericata Meigen) on gravesoil microbial communities. Both experiments were conducted in a laboratory setting using freshly killed mouse carcasses. Mouse carcasses were …

Laboratory Diagnosis Of Clostridium Difficile Infection: Can Molecular Amplification Methods Move Us Out Of Uncertainty?, Fred C. Tenover, Ellen Jo Baron, Lance R. Peterson, David Persing

Biology Faculty Publications

The laboratory diagnosis of Clostridium difficile infection (CDI) continues to be challenging. Recent guidelines from professional societies in the United States note that enzyme immunoassays for toxins A and B do not have adequate sensitivity to be used alone for detecting CDI, yet the optimal method for diagnosing this infection remains unclear. Nucleic acid amplification tests (NAATs) that target chromosomal toxin genes (usually the toxin B gene, tcdB) show high sensitivity and specificity, provide rapid results, and are amenable to both batch and on-demand testing, but these tests were not universally recommended for routine use in the recent guidelines. …

Linking Fruit Traits To Variation In Predispersal Vertebrate Seed Predation, Insect Seed Predation, And Pathogen Attack, Noelle G. Beckman, Helene C. Muller-Landau

Biology Faculty Publications

The importance of vertebrates, invertebrates, and pathogens for plant communities has long been recognized, but their absolute and relative importance in early recruitment of multiple coexisting tropical plant species has not been quantified. Further, little is known about the relationship of fruit traits to seed mortality due to natural enemies in tropical plants. To investigate the influences of vertebrates, invertebrates, and pathogens on reproduction of seven canopy plant species varying in fruit traits, we quantified reductions in fruit development and seed germination due to vertebrates, invertebrates, and fungal pathogens through experimental removal of these enemies using canopy exclosures, insecticide, and …

The Tubulin Deglutamylase Ccpp-1 Regulates The Function And Stability Of Sensory Cilia In C. Elegans, Robert O'Hagan, Brian P. Piasecki, Malan Silva, Prasad Phirke, Ken C Q Nguyen, David H. Hall, Peter Swoboda, Maureen M. Barr

Department of Biology Faculty Scholarship and Creative Works

Background: Posttranslational modifications (PTMs) such as acetylation, detyrosination, and polyglutamylation have long been considered markers of stable microtubules and have recently been proposed to guide molecular motors to specific subcellular destinations. Microtubules can be deglutamylated by the cytosolic carboxypeptidase CCP1. Loss of CCP1 in mice causes cerebellar Purkinje cell degeneration. Cilia, which are conserved organelles that play important diverse roles in animal development and sensation, contain axonemes comprising microtubules that are especially prone to PTMs. Results: Here, we report that a CCP1 homolog, CCPP-1, regulates the ciliary localization of the kinesin-3 KLP-6 and the polycystin PKD-2 in male-specific sensory neurons …

The Group-Level Consequences Of Sexual Conflict In Multigroup Populations, Omar Tonsi Eldakar, Andrew C. Gallup

Biology Faculty Articles

In typical sexual conflict scenarios, males best equipped to exploit females are favored locally over more prudent males, despite reducing female fitness. However, local advantage is not the only relevant form of selection. In multigroup populations, groups with less sexual conflict will contribute more offspring to the next generation than higher conflict groups, countering the local advantage of harmful males. Here, we varied male aggression within-and between-groups in a laboratory population of water striders and measured resulting differences in local population growth over a period of three weeks. The overall pool fitness (i.e., adults produced) of less aggressive pools exceeded …

Guantánamo Bodies: Law, Media, And Biopower, Cary H. Federman, Dave Holmes

Department of Justice Studies Faculty Scholarship and Creative Works

The idea of the Guantánamo detainee as a Muselmann, the lowest order of concentration camp inmates, contains within it important implications for the new understanding of sovereignty in the era of Guantánamo, in an age of exception. The purpose of this article is to explain the status of those who are detained at Guantánamo Bay. Stated broadly, in assessing that status, we will emphasize the connection between the altered meaning of sovereignty that has accompanied the placing of prisoners in an American penal colony in Cuba and the biopolitical status of the prisoners who reside there. More particularly, we …

River Drying Lowers The Diversity And Alters The Composition Of An Assemblage Of Desert Riparian Arthropods, Kevin E. Mccluney, John L. Sabo

Biological Sciences Faculty Publications

Summary 1. Many studies have shown negative effects of river drying on in‐stream animals. However, the influence of river drying on riparian animals remains poorly studied. We examined ground‐dwelling riparian arthropod assemblages along a drying section of the semi‐arid San Pedro River in southeastern Arizona, U.S.A.

2. We found strong differences in assemblage composition, taxon diversity and the abundance of key taxa between dry and flowing sites, with higher diversity and abundance of most taxa at flowing sites.

3. Changes in assemblage composition, taxon diversity and abundance of representative taxa were associated with a combined measure of water availability that …

Breeding Ecology Of The Pileated Woodpecker, Brandon Lennon Noel

Student Theses and Dissertations

The purported rediscovery of the ivory-billed woodpecker (Campephilus principalis) in the Cache River National Wildlife Refuge in 2004 was a monumental moment in conservation biology. Although controversy surrounds this and other sightings of ivory-billed woodpeckers within bottomland hardwood forests, the rediscovery of a species thought to have gone extinct revitalized optimism focused on its conservation. What knowledge we possess about ivory-billed woodpeckers comes from research done by James Tanner in the 1930s and his data are pseudo-replicated from just a few pairs. Tanner suggested that sweetgum-oak forest cover types were better quality habitats for ivory-billed woodpeckers and other woodpecker species …

2011 Meeting Missing Abstracts

Virginia Journal of Science

Abstracts not included in Virginia Journal of Science Volume 62, No. 1 and 2, presented at the 89th Annual Meeting of the Virginia Academy of Science, May 25-27, 2011, at the University of Richmond, Richmond VA.

Mechanisms Of Neuronal Death Induced By Environmental Toxicants In Murine Cortical Culture, Travis Rush

Dissertations (1934 -)

This study was directed at examining the neurotoxic mechanisms of several classes of environmental toxicants implicated in neurodegenerative disease. Primary cortical cultures were exposed to organophosphorus pesticides, heavy metals and the cyanobacterial toxin, beta-N-methylamino-L-alanine (BMAA). Several components relating to neuronal injury were assessed in each study and novel aspects are described.

The main action of organophosphorous insecticides is generally believed to be the inhibition of acetylcholinesterase. However, these compounds are now recognized to inhibit many other enzymes and cause neuronal death through a variety of mechanisms. I found that exposure to chlorpyrifos or diazinon caused concentration-dependent neurotoxicity that could not …

Transcriptomic Characterization Of A Synergistic Genetic Interaction During Carpel Margin Meristem Development In Arabidopsis Thaliana, April N. Wynn, Elizabeth E. Rueschhoff, Robert G. Franks

Biological Sciences Research

In flowering plants the gynoecium is the female reproductive structure. In Arabidopsis thalianaovules initiate within the developing gynoecium from meristematic tissue located along the margins of the floral carpels. When fertilized the ovules will develop into seeds. SEUSS (SEU) and AINTEGUMENTA (ANT) encode transcriptional regulators that are critical for the proper formation of ovules from the carpel margin meristem (CMM). The synergistic loss of ovule initiation observed in the seu ant double mutant suggests that SEU and ANT share overlapping functions during CMM development. However the molecular mechanism underlying this synergistic interaction is unknown. Using …

Demasculinization And Feminization Of Male Gonads By Atrazine: Consistent Effects Across Vertebrate Classes, Krista A. Mccoy

Integrative Biology Faculty and Staff Publications

Atrazine is the most commonly detected pesticide contaminant of ground water, surface water, and precipitation. Atrazine is also an endocrine disruptor that, among other effects, alters male reproductive tissues when animals are exposed during development. Here, we apply the nine so-called “Hill criteria” (Strength, Consistency, Specificity, Temporality, Biological Gradient, Plausibility, Coherence, Experiment, and Analogy) for establishing cause–effect relationships to examine the evidence for atrazine as an endocrine disruptor that demasculinizes and feminizes the gonads of male vertebrates. We present experimental evidence that the effects of atrazine on male development are consistent across all vertebrate classes examined and we present a …

Fall 2011; Biology @ Su, Syracuse University Biology Department

Biology @ SU

No abstract provided.

Mouse Versus Rat: Profound Differences In Meiotic Regulation At The Level Of The Isolated Oocyte, Stephen M. Downs

Biological Sciences Faculty Research and Publications

Cumulus cell-enclosed oocytes (CEO), denuded oocytes (DO), or dissected follicles were obtained 44–48 hr after priming immature mice (20–23 days old) with 5 IU or immature rats (25–27 days old) with 12.5 IU of equine chorionic gonadotropin, and exposed to a variety of culture conditions. Mouse oocytes were more effectively maintained in meiotic arrest by hypoxanthine, dbcAMP, IBMX, milrinone, and 8-Br-cGMP. Atrial natriuretic peptide, a guanylate cyclase activator, suppressed maturation in CEO from both species, but mycophenolic acid reversed IBMX-maintained meiotic arrest in mouse CEO with little activity in rat CEO. IBMX-arrested mouse, but not rat, CEO were induced to …

Breeding Biology Of Oryzomys Palustris, The Marsh Rice Rat, In Eastern Virginia, Robert K. Rose, Erin A. Dreelin

Virginia Journal of Science

The objectives of our study were to determine the age of maturity, litter size, and the timing of the breeding season of marsh rice rats (Oryzomys palustris) of coastal Virginia. From May 1995 to May 1996, monthly samples of rice rats were live-trapped in two coastal tidal marshes of eastern Virginia, and then necropsied. Sexual maturity was attained at 30-40 g for both sexes. Mean litter size of 4.63 (N= 16) did not differ among months or in mass or parity classes. Data from two other studies conducted in the same county, one of them contemporaneous, also were …

Functional Characterization Of Putative Non-Specific Phospholipase C (Npc) In Arabidopsis Thaliana, Carlotta Antonetta Peters

Dissertations

Abstract Phospholipases are enzymes that hydrolyze phospholipids. In terms of the position of bond hydrolysis, phospholipases are classified into four major types: phospholipase C (PLC), phospholipase D (PLD), phospholipase A1 (PLA1) and phospholipase A2 (PLA2). PLC hydrolyzes phospholipids at the first phosphodiester bond, producing diacylglycerol (DAG) and a phosphorylated head group. Based on substrate specificity, PLC is divided into two distinctively different groups: phosphoinositide-specific phospholipase C (PI-PLC) and non-specific phospholipase C (NPC). There are six members of the NPC family in Arabidopsis, designated NPC1 through 6 that bears sequence homology to bacterial phosphatidylcholine hydrolyzing PLC (PC-PLC). However, their function remains …

Global Analysis Of Serine-Threonine Protein Kinase Genes In Neurospora Crassa, Gyungsoon Park, Jacqueline A. Servin, Gloria E. Turner, Lorena Altamirano

Dartmouth Scholarship

Serine/threonine (S/T) protein kinases are crucial components of diverse signaling pathways in eukaryotes, including the model filamentous fungus Neurospora crassa. In order to assess the importance of S/T kinases to Neurospora biology, we embarked on a global analysis of 86 S/T kinase genes in Neurospora. We were able to isolate viable mutants for 77 of the 86 kinase genes. Of these, 57% exhibited at least one growth or developmental phenotype, with a relatively large fraction (40%) possessing a defect in more than one trait. S/T kinase knockouts were subjected to chemical screening using a panel of eight chemical treatments, with …

Contagious Yawning And Seasonal Climate Variation, Andrew C. Gallup, Omar Tonsi Eldakar

Biology Faculty Articles

Recent evidence suggests that yawning is a thermoregulatory behavior. To explore this possibility further, the frequency of contagious yawning in humans was measured while outdoors in a desert climate in the United States during two distinct temperature ranges and seasons (winter: 22°C; early summer: 37°C). As predicted, the proportion of pedestrians who yawned in response to seeing pictures of people yawning differed significantly between the two conditions (winter: 45%; summer: 24%). Across conditions yawning occurred at lower ambient temperatures, and the tendency to yawn during each season was associated with the length of time spent outside prior to being tested. …

Micrornas And Phylogenomics Resolve The Relationships Of Tardigrada And Suggest That Velvet Worms Are The Sister Group Of Arthropoda, Lahcen I. Campbell, Omar Rota-Stabelli, Gregory D. Edgecombe, Trevor Marchioro, Stuart J. Longhorn, Maximilian J. Telford, Hervé Philippe, Lorena Rebecchi, Kevin J. Peterson, Davide Pisani

Dartmouth Scholarship

Morphological data traditionally group Tardigrada (water bears), Onychophora (velvet worms), and Arthropoda (e.g., spiders, insects, and their allies) into a monophyletic group of invertebrates with walking appendages known as the Panarthropoda. However, molecular data generally do not support the inclusion of tardigrades within the Panarthropoda, but instead place them closer to Nematoda (roundworms). Here we present results from the analyses of two independent genomic datasets, expressed sequence tags (ESTs) and microRNAs (miRNAs), which congruently resolve the phylogenetic relationships of Tardigrada. Our EST analyses, based on 49,023 amino acid sites from 255 proteins, significantly support a monophyletic Panarthropoda including Tardigrada and …