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L-Arginine Protects Against Ethylene Glycol-Induced Gastric Mucosal Damage In Rats: Immunohistochemical And Electron Microscopic Study, Samah Kandeel, Thoryaa El_Deeb, Ehsan Salah, Nafisa El-Bakary, Naglaa Sarhan, Mohamed Balaha, Hiroki Sakai, Tokuma Yanai

Turkish Journal of Biology

Ethylene glycol is an alcohol widely used in industry as an antifreeze. It affects the normal gastric mucosal defense mechanisms, inducing surface ulcerations. L-arginine is a precursor of nitric oxide that exhibits multiple biological properties; among them is the acceleration of wound healing, especially in the stomach. Caspase-3 immunohistochemistry, and semithin and ultrathin section examinations were used to investigate the possible protective effect of L-arginine on ethylene glycol-induced gastric mucosal damage in rats. Three animal groups were used: group A (control group), group B (received 3.3 mL/kg ethylene glycol for 2 weeks), and group C (received 200 mg/kg of L-arginine …

Isolation And Characterization Of A New Family Of Cysteine Rich Proteins Involved In The Assembly Process Of Dragline Silk From The Black Widow Spider, Latrodectus Hesperus, Thanh Due Pham

University of the Pacific Theses and Dissertations

Spider silks are protein-based fibers that possess remarkable mechanical properties. Major ampullate silk, also referred to as dragline silk, is renowned for its high tensile strength, extensibility and toughness. Dragline silk is produced from a liquid spinning dope that undergoes chemical and physical changes during extrusion. To date, no proteins that participate in the assembly process of major ampullate silk proteins have been identified. The goal of this project is the identification of such protein products. De novo sequencing of peptides from in pollution tryptic digestion of black widow spider dragline silk identified several novel peptides that were not derived …

Influence Of Latitude On The Winter Abundance Of Red-Tailed Hawks (Buteo Jamaicensis) And American Kestrels (Falco Sparverius) In Illinois, Given Harper, Anna Groves, Vic Berardi, Paul Sweet, Jance Sweet, Angelo Capparella

Scholarship

We use five years of data from 18 routes surveyed to determine the temporal stability of a first reported 100 years pattern, and reconfirmed that the abundance of winter 50 years ago tailed Hawk and American Kestrel decreases with increasing latitude, being more high in the central regions of Illinos in the northern regions. Trained volunteers conducted sampling ( n  = 143) a month driving along selected routes from December to February, from 2004-2005 to 2008-2009. We found significant increases in the abundance of both species from the northern regions to the central regions of Illinois. No significant effects of …

Feeding Modes Of Larvae Of Nematostella Vectensis (Cnidaria: Anthozoa), Amanda Kehr Smith '13, William Jaeckle

Students' Professional Presentations and Publications

We assessed the ability of larvae of the starlet sea anemone, Nematostella vectensis, to assimilate dissolved organic material (DOM) and ingest artificial and natural particles from seawater. Planulae were exposed to the proteins ferritin and labeled bovine serum albumin (FITC-BSA) and the polysaccharides iron dextran and labeled dextran (FITC-dextran) at solute concentrations between 0.25-1.0 mg/mL for 1-5 hours at 22°C. Other larvae were incubated with polystyrene beads (0.5 μm, 106 beads/mL and 4.5 μm and 6 μm, 103 beads/mL) or with algal cells (Dunaliella tertiolecta, 5 ' 103 cells/mL) for 2.5-5 h. The label from all provided macromolecules …

Birds And Butterflies Respond To Soil-Induced Habitat Heterogeneity In Experimental Plantings Of Native Tallgrass Prairie Species In Iowa, Usa, Benjamin J. Hoksch, Mark C. Myers, James T. Mason, Jarrett D. Pfrimmer, Andrew J. Ridgway

Undergraduate Student Work

We studied interrelationships between prairie plant establishment, habitat heterogeneity, and bird and butterfly biodiversity in an experimental prairie reconstruction in Iowa, USA. We seeded 48 research plots on three soil types with one of four treatments containing one, five, 16, or 32 species. During early establishment, neither bird nor butterfly abundance, species richness, or community diversity varied among the three soil types; however, there were significant treatment × soil type interactions when comparing bird and butterfly community composition among plots. Our results demonstrate that plots established with identical seed mixes and management practices developed variable habitat characteristics due to variation …

Genomics Of A Metamorphic Timing Qt:: Met1 Maps To A Unique Genomic Position And Regulates Morph And Species-Specific Patterns Of Brain Transcription, Robert B. Page, M. A. Borley, D. K. Kump, S. R. Voss

Biology Faculty Publications (Archived)

Very little is known about genetic factors that regulate life history transitions during ontogeny. Closely related tiger salamanders (Ambystoma species complex) show extreme variation in metamorphic timing, with some species foregoing metamorphosis altogether, an adaptive trait called paedomorphosis. Previous studies identified a major effect quantitative trait locus (met1) for metamorphic timing and expression of paedomorphosis in hybrid crosses between the biphasic Eastern tiger salamander (Ambystoma tigrinum tigrinum) and the paedomorphic Mexican axolotl (Ambystoma mexicanum).We used existing hybrid mapping panels and a newly created hybrid cross to map the met1 genomic region and determine the effect of met1 on larval growth, …

Worms, Nematoda, Scott Lyell Gardner

Scott L. Gardner Publications

Nematodes are the most speciose phylum of metazoa on earth. Not only do they occur in huge numbers as parasites of all known animal groups, but also they are found in the soils, as parasites of plants, and in large numbers in the most extreme environments, from the Antarctic dry valleys to the benthos of the ocean. They are extremely variable in their morphological characteristics, with each group showing morphological adapta­tions to the environment that they inhabit. Soil-dwelling forms are extremely small; many marine species have long and complex setae; and parasitic species man­ifest amazingly great reproductive potential and large …

Phytoplankton In Virginia Lakes And Reservoirs, Harold G. Marshall

Biological Sciences Faculty Publications

This study involves a phytoplankton summer/autumn survey in 46 Virginia lakes and reservoirs during 2010-2012. A total of 307 taxa were identified which included several filamentous and colonial cyanabacteria in bloom concentrations. With the exception of one natural lake, the other sites sampled represent impoundments created decades ago, with the majority presently classified as meso- or eutrophic. Among the cyanobacteria were 6 known toxin producers (Anabaena circinalis, Anabaena spiroides, Aphanizomenon flos-aquae, Cylindrospermopsis raciborskii, Limnothrix redekei, and Microcystis aeruginosa). The study characterizes phytoplankton populations in these aging freshwater habitats taken from a large number …

Age-Associated Metabolic And Morphologic Changes In Mitochondria Of Individual Mouse And Hamster Oocytes, Fatma Simsek-Duran, Fang Li, Wentia Ford, R. James Swanson, Howard W. Jones Jr., Frank J. Castora

Biological Sciences Faculty Publications

Background: In human oocytes, as in other mammalian ova, there is a significant variation in the pregnancy potential, with approximately 20% of oocyte-sperm meetings resulting in pregnancies. This frequency of successful fertilization decreases as the oocytes age. This low proportion of fruitful couplings appears to be influenced by changes in mitochondrial structure and function. In this study, we have examined mitochondrial biogenesis in both hamster (Mesocricetus auratus) and mouse (Mus musculus) ova as models for understanding the effects of aging on mitochondrial structure and energy production within the mammalian oocyte.

Methodology/Principal Findings: Individual metaphase …

Factors Shaping The Ontogeny Of Vocal Signals In A Wild Parrot, Karl S. Berg, Steven R. Beissinger, Jack W. Bradbury

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Parrots rely heavily on vocal signals to maintain their social and mobile lifestyles. We studied vocal ontogeny in nests of wild green-rumped parrotlets (Forpus passerinus) in Venezuela. We identified three successive phases of vocal signaling that corresponded closely to three independently derived phases of physiological development. For each ontogenetic phase, we characterized the relative importance of anatomical constraints, motor skills necessary for responding to specific contexts of the immediate environment, and the learning of signals that are necessary for adult forms of communication. We observed shifts in the relative importance of these three factors as individuals progressed from …

Opportunistic Pathogenic Bacteria Colonize Thorns Of Native Rio Grande Valley Plants, Felicia A. Charles, Sergio Cepeda, J. Andrew Mcdonald, Kristine L. Lowe

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Thorns serve as mechanical defenses of plants against herbivory. However, plant thorns harbor microorganisms that are potentially pathogenic. These pathogens may be transferred to herbivores and other animals and provide an additional defense for the plants. Thorns from 5 plant species native to the Rio Grande Valley of South Texas were collected and used to isolate bacteria colonizing the thorn surface. Thorns, leaves and stems of plants were visualized using Scanning Electron Microscopy (SEM) to observe any bacteria on the plant surface. Isolated bacteria were tested for their ability to grow in aerobic versus anaerobic environments, to produce hemolysis, carbon …

Mitigating Predatory Ants Promotes Establishment Of Biological Control Of Arundo By Arundo Scale In The Cattle Fever Tick Quarantine Zone, A. Velez-Bonner, W. L. A. Osbrink, D. W. Thomas, Kenneth R. Summy, A. T. Showler, A. Perez De Leon, John A. Goolsby

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Ant collection, identification, and control experiments were conducted to improve the establishment of the arundo scale, Rhizaspidiotus donacis, a biological control agent of Arundo donax, an invasive weed in the riparian habitats along the Rio Grande in Texas. Observational studies indicated R. donacis immatures are preyed upon by a variety of predator insects, especially ants. A survey of the principle ant species was made at sites along the Rio Grande with Arundo donax to help direct biological control strategies. We conclude that uses of ant baits can effectively control the common ant species found in these habitats and improve the …

Membrane And Dna Damaging/Protective Effects Of Eugenol, Eucalyptol, Terpinen-4-Ol, And Camphor At Various Concentrations On Parental And Drug-Resistant H1299 Cells, Aysun Özkan, Ayşe Erdoğan

Turkish Journal of Biology

Eugenol, eucalyptol, terpinen-4-ol, and camphor, used as flavor agents in cosmetic and food products, have both prooxidant and antioxidant activities. To clarify the mechanisms of their cytotoxic effect and the factors affecting their antioxidant/prooxidant activities, we investigated cell membrane and DNA damage/protective effects induced by eugenol, eucalyptol, terpinen-4-ol, and camphor in parental and drug-resistant human lung cancer cell lines. The parental cells were found approximately 3, 6, and 8 times more sensitive to camphor cytotoxicity than drug-resistant cells at 24, 48, and 72 h respectively. The cytotoxic activity for both cell types was found to be in the order of …

Transcriptional Profiling Of Transferrin Gene From Egyptian Cotton Leaf Worm, Spodoptera Littoralis, Nurper Güz, Asli Dağeri̇, Tuğba Erdoğan, Mouzhgan Mousavi, Şeri̇fe Bayram, Mehmet Oktay Gürkan

Turkish Journal of Biology

Iron is an essential nutrient for almost all organisms, but it is also a potent toxin because it can catalyze oxidative reactions that are destructive to cells. Transferrin is an essential protein involved in iron metabolism, immunity, and vitellogenesis in insects. We have characterized a cDNA encoding a putative iron-binding transferrin (SpliTrf) in Egyptian cotton leaf worm, Spodoptera littoralis (Lepidoptera: Noctuidae), an important pest that causes extensive losses in many vegetable, fodder, and fiber crops. The structure of the putative SpliTrf showed significant homology to other insect transferrins. Gene expression of SpliTrf was examined from different adult tissues including the …

Response Of The Epiphytic Algal Communities To Experimentally Elevated Nutrient Levels In Intertidal Salt Marsh Habitats, Stephanie Verhulst

UNF Graduate Theses and Dissertations

Epiphytes are organisms attached to plants and are responsible for the majority of primary productivity in many aquatic systems. While epiphytes serve as a valuable food resource to herbivores, they may prove deleterious to the host plant by competing for light and nutrients, as well as increasing sheer stress. This study evaluated the impacts of nutrient additions, nitrogen and phosphorus, on the epiphytic algal community on Spartina alterniflora over the course of two growing seasons. Three nutrient treatments (N, P, and N+P) and one control treatment were placed in a salt marsh in the Tolomato River during the growing seasons …

Comparative Sugar Transport By Crustacean Hepatopancreas And Intestine, Ada Duka

UNF Graduate Theses and Dissertations

Glucose is transported in crustacean hepatopancreas and intestine by Na⁺-dependent co-transport, while Na⁺-dependent D-fructose influx has only been described for the hepatopancreas. It is still unclear if the two sugars are independently transported by two distinct cotransporter carrier systems. In this study lobster (Homarus americanus) hepatopancreas brush border membrane vesicles (BBMV) were used to characterize, in detail, the cation-dependency of both D-[³H] glucose and D-[³H] fructose influxes, while in vitro perfused intestines were employed to determine the nature of cation-dependent sugar transport in this organ. Over the sodium concentration range …

The Effects Of Multiple Abiotic Stressors On The Susceptibility Of The Seagrass Thalassia Testudinum To Labyrinthula Sp., The Causative Agent Of Wasting Disease, Nichole Danielle Bishop

UNF Graduate Theses and Dissertations

In the past century, seagrasses have experienced massive die off episodes in what has been collectively referred to as “wasting disease.” Researchers generally agree that wasting disease is caused by a protist of the Labyrinthula genus, and that environmental stressors can make some populations of seagrasses more susceptible to infection. The purpose of this study was to examine the combined effects of elevated salinity, elevated temperature, elevated sulfide and night-time hypoxia on Thalassia testudinum health and its response to Labyrinthula sp. infection under controlled conditions. To test these effects, microcosms were utilized and individual seagrass shoots were randomly assigned to …

Variations Of Ghrelin, Growth Hormone, And Insulin-Like Growth Factor I In The West Indian Manatee (Trichechus Manatus), Rachel Lynn Cimino

UNF Graduate Theses and Dissertations

The metabolic hormones ghrelin, growth hormone, and insulin-like growth factor I are influenced by developmental age, sex, and nutritional status in domestic and free-ranging species. However the role these hormones play has not previously been explored in sub-tropical/ tropical mammals. Furthermore, the seasonality of species with less dynamic environmental cues, such as the West Indian manatee, have not been studied. The West Indian manatee is and endangered species distributed in the southeastern United States and throughout the Caribbean basin, and its nutritional physiology is influenced by environmental factors. Understanding the hormone response to nutritional status in this species and its …

Nutrient Availability Affects Flowering Rate But Has Limited Influence On Morphology Of The Hooded Pitcher Plant, Sarracenia Minor., Justin M. Lemmons

UNF Graduate Theses and Dissertations

Carnivorous plants perform as both producers and consumers. Botanical carnivory has evolved in sunny, moist, nutrient-poor environments, and the primary nutrient supplied by prey is proposed to be nitrogen. There is a trade-off between carnivorous and photosynthetic structures which corresponds to degree of carnivory expression and available nutrients. This study was conducted on the hooded pitcher plant, Sarracenia minor, which is a facultative wetland plant and Florida-threatened species. Sarracenia minor is considered a specialist myrmecophage and ants characterize the majority of attracted and captured prey. Ants not only provide nutritional benefit, but also protection against herbivory. A natural population …

Impact Of Nutritional Status On The Somatotropic Axis And Ghrelin In Phocid Seals, Rachael Dailey

UNF Graduate Theses and Dissertations

Metabolic hormones and their axes, including the target tissues and receptors, regulate the tissue specific utilization of nutrients with in the body. The purpose of this research was to understand the hormonal control of complex nutrient partitioning mechanisms involved in young, growing animals. Specifically, this involved the investigation of metabolic hormones and the regulation of growth in two common species of phocids (true seals): harbor seal (Phoca vitulina) and Northern elephant seal (Mirounga angustirostris) pups. This longitudinal study examines young phocids from nutritional nadir through realimentation (realimentation) to investigate how metabolic hormones involved in both food intake and nutrient partitioning …

A Survey Of The Taxonomy Of The Cyanobacteria From Northeast Florida, Descriptions Of Novel Taxa, And An Investigation Into The Factors Which Influence The Epibenthic Cyanobacterial Community, Holly Stephanie Stocks

UNF Graduate Theses and Dissertations

Cyanobacteria are important components of the aquatic system, valued for their oxygen production, nitrogen fixation, and as the base of many aquatic food webs. This study investigated several aspects of cyanobacteria such as the diversity and response to nutrient enrichments. A survey of Northeast Florida was conducted between the years of 2010 and 2012; a total of 145 taxa were identified in freshwater habitats, such as springs, lakes, rivers, and retention ponds. While surveying the St. Johns River in Jacksonville, Florida, a novel Stigonematalean taxon was isolated and cultured. Subsequent morphological and genetic analyses indicate that this taxon is related …

The Influence Of Different Cover Types On American Robin Nest Success In Organic Agroecosystems, John E. Quinn, Amy Oden, James R. Brandle

Biology Publications

There are many opportunities for biodiversity conservation in organic farm systems. Successful and sustainable conservation efforts in organic systems, however, need to measure appropriate outcomes. In particular, data are needed on the breeding success of associated wildlife species. We measured nesting success of the American Robin (Turdus migratorius) in woodlands embedded within eight organic farms in eastern Nebraska. We modeled daily nest survival rate to identify land use and land cover patterns that optimize conservation of birds in organic farm systems. The percentage of a crop in the fields adjacent to linear woodlands best predicted daily survival rate. …

A Microfluidic Anti-Factor Xa Assay Device For Point-Of-Care Monitoring Of Anticoagulation Therapy, Leanne F. Harris, Paul Rainey, Vanessa Castro-Lopez, James S. O'Donnell, Anthony J. Killard

Articles

The development of new point-of-care coagulation assay devices is necessary due to the increasing number of patients requiring long-term anticoagulation in addition to the desire for appropriate, targeted anticoagulant therapy and a more rapid response to optimization of treatment. However, the majority of point-of-care devices currently available for hemostasis testing rely on clot-based endpoints which are variable and unreliable and are limited to measuring only certain portions of the coagulation pathway. There is a need for the introduction of point-of-care devices that can execute a broader range of tests; for example, the diagnosis of factor-specific diseases, as well as more …

An Investigation Of Alternative Oxidase Presence, Expression, And Regulation In The Moss Physcomitrella Patens, Karina I. Neimanis

Theses and Dissertations (Comprehensive)

Alternative oxidase (AOX) is an inner mitochondrial membrane protein that introduces a branch point at ubiquinone within the respiratory electron transport system (ETS). The AOX protein bypasses two sites of proton translocation within the ETS and as a result the yield of ATP per oxygen consumed is significantly reduced. Although AOX appears to be energetically wasteful, recent studies have revealed that AOX has a wide taxonomic distribution. AOX multigene families, transcripts, protein levels, and enzymatic activity have been most thoroughly characterized in many angiosperm (flowering) plants. Given the data available for angiosperm AOXs, evidence of non-angiosperm AOXs in the primary …

Genetic Diversity In Populations Of Epiphanes Chihuahuaensis (Rotifera: Monogononta) In The Northern Chihuahuan Desert, Diego E. Reyes

Open Access Theses & Dissertations

1. Cryptic speciation in zooplankton is a phenomenon that has been recently gaining much attention. This is due in part to advances in molecular techniques which help in the identification of morphologically indistinct species. Organisms that have been traditionally believed to have cosmopolitan distributions are being found to be composed of cryptic species complexes with high levels of genetic divergence among lineages.

2. Epiphanes chihuahuaensis is a member in the Epiphanes senta species complex. In a previous study by Schröder & Walsh (2007), genetic data, along with morphological and reproductive isolation data were employed to help delineate four species within …

International Polar Year (Ipy) Back To The Future (Btf): Changes In Arctic Ecosystem Structure Over Decadal Times Scales, Sandra Villarreal

Open Access Theses & Dissertations

Arctic vegetation communities are responding to climate warming through shifts in species composition and diversity but most observations have been made over relatively short time frames, and/or in association with experimental manipulations. Because vegetation plays a key role in regulating ecosystem productivity, nutrient cycling, surface energy budgets, and trophic interactions in the Arctic, there is a need to better understand shifts in tundra vegetation communities over decadal time scales. Understanding these shifts and their impact on ecosystem structure and function in the Arctic has important implications for predicting the future state of both the Arctic and the Earth System. Long …

Smb Myosin Heavy Chain Knockout Enhances Tonic Contraction And Reduces The Rate Of Force Generation In Ileum And Stomach Antrum, Qian Huang, Gopal J. Babu, Muthu Periasamy, Thomas J. Eddinger

Biological Sciences Faculty Research and Publications

The role of SMA and SMB smooth muscle myosin heavy chain (MHC) isoforms in tonic and phasic contractions was studied in phasic (longitudinal ileum and stomach circular antrum) and tonic (stomach circular fundus) smooth muscle tissues of SMB knockout mice. Knocking out the SMB MHC gene eliminated SMB MHC protein expression and resulted in upregulation of the SMA MHC protein without altering the total MHC protein level. Switching from SMB to SMA MHC protein expression decreased the rate of the force transient and increased the sustained tonic force in SMB^(−/−) ileum and antrum with high potassium (KPSS) but not …

The Conservation Status Of The World’S Reptiles, Tony Gamble

Biological Sciences Faculty Research and Publications

Effective and targeted conservation action requires detailed information about species, their distribution, systematics and ecology as well as the distribution of threat processes which affect them. Knowledge of reptilian diversity remains surprisingly disparate, and innovative means of gaining rapid insight into the status of reptiles are needed in order to highlight urgent conservation cases and inform environmental policy with appropriate biodiversity information in a timely manner. We present the first ever global analysis of extinction risk in reptiles, based on a random representative sample of 1500 species (16% of all currently known species). To our knowledge, our results provide the …

Diversity, Resource Partitioning, And Species Turnover In Neotropical Saproxylic Beetles (Coleoptera: Cerambycidae, Curculionidae) Associated With Trees In The Brazil Nut Family (Lecythidaceae), Joyce Lynn Fassbender

Dissertations, Theses, and Capstone Projects

Deforestation and global changes in temperature and moisture associated with rising levels of greenhouse gases are expected to have strong, direct effects on abundance of wood-boring beetles through loss of larval feeding substrates, and indirect effects through climate and microclimate change. This dissertation examines Neotropical saproxylic beetle (Coleoptera: Curculionidae) diversity, niche breadth, and resource partitioning, and predicts possible impacts of climate change. Data from beetle rearing experiments conducted in French Guiana and Peru were analyzed to assess species richness, abundance, host specificity, seasonality and stratification of wood-boring beetles associated with the Brazil nut family (Lecythidaceae). Niche stability was assessed over …

Medicinal Plants Of Northern Thailand For The Treatment Of Cognitive Impairment In The Elderly, Lisa C. Offringa

Dissertations, Theses, and Capstone Projects

Dementia is a progressive neurological disease affecting memory and behavior. The diagnosis of dementia is increasing exponentially worldwide and with it the potential risk for a severe social and economic burden of caring for an increasing debilitated elderly population. Cognitive impairment, and especially memory loss, can be the first indication of dementia. This study documents the treatment of cognitive impairment in the elderly by Thai traditional healers in northern Thailand usingmedicinal plants. Interviews were conducted from 2008-2012 to investigate the etiology of dementia in Thai Traditional Medicine and identify plants used to treat memory loss in the pharmacopeia of northern …