Digital Commons Network^™

Growing Yeast For Livestock, Zachary Christman

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Over 500,000 tons of organic materials such as food scraps are disposed of each year in Wisconsin. A large percentage of this material could be composted or turned into useful products. The purpose of this article is to educate farmers and organizations on how to turn food waste into a high value food source for livestock. Yeast can be grown at any time of the year without the large inputs of agricultural chemicals and machinery that is common with other feed production methods. A yeast growing facility can be scalable to any size the producer wants such as a small …

Spatial And Temporal Distribution Of Aquatic Insects In The Dicle (Tigris) River Basin, Turkey, With New Records, Fatma Çeti̇nkaya, Aysel Bekleyen

Turkish Journal of Zoology

We investigated insects of the Dicle (Tigris) River Basin in terms of their composition and spatiotemporal distribution. Larvae, pupae, pupal exuviae, and nymphs of insects were obtained from samples collected by a plankton net monthly during a 1-year period in 2008 and 2009 at seven different sites of the Dicle (Tigris) River Basin. A total of 35 taxa from the orders Trichoptera (1 taxon), Ephemeroptera (3 taxa), and Diptera (31 taxa) were identified. Chironomidae (Diptera) was the most diverse group and was represented by three major subfamilies, namely Tanypodinae (2 taxa), Orthocladiinae (19 taxa), and Chironominae (7 taxa). Among these …

Sexual Dimorphism In Two Catfish Species, Mystus Pelusius (Solander, 1794) And Glyptothorax Silviae Coad, 1981 (Teleostei: Siluriformes), Hamid Reza Esmaeili, Golnaz Sayyadzadeh, Mohammad Amini Chermahini

Turkish Journal of Zoology

Sexual dimorphism of two catfish, Mystus pelusius (Solander, 1794) and Glyptothorax silviae Coad, 1981, is presented based on the examination of external morphology of the fish and morphology of the gonads. We observed sexual dimorphism for M. pelusius in the shape and position of the genital papilla. In the male, the genital papilla was a small, fleshy, pointed and broad-based structure. The pelvic fin was short and did not reach back to the genital papilla. In females of M. pelusius the opening of the genital structure was without any protrusion or with a very small, dot-like structure in a few …

Habitat Use And Activity Of European Glass Lizard, Pseudopus Apodus (Pallas, 1775),In Southeastern Bulgaria, Ivan Telenchev, Daniela Nikolova, Rossen Tzonev

Turkish Journal of Zoology

The way in which animals use the physical and biological resources in habitats is an important aspect of their behavioral ecology. Here, we studied the activity and habitat use of the European glass lizard in two habitats in southeastern Bulgaria during the spring and summer of 2015. We registered behaviors such as basking and movement, and we recorded hiding locations. We also attempted to capture the individual mark of every observed individual, to determine its sex, age, and body temperature, immediately at capture. In parallel, essential environmental parameters were identified: temperature of the air near the lizard, substrate temperature, dominant …

Tarsonemid Mites (Acari, Heterostigmatina) Found In Association With Bark Beetles(Insecta, Curculionidae, Scolytinae) In Iran, Wojciech Magowski, Ali Ahadiyat, Hadi Ostovan

Turkish Journal of Zoology

The authors report on the presence of species of the family Tarsonemidae in association with three bark beetle species (Orthotomicus erosus (Wollaston, 1857), Scolytus scolytus (Fabricius, 1775), and S. multistriatus (Marsham, 1802)) in two provinces in Central and Northern Iran. The following mite species are new for the fauna of Iran: Heterotarsonemus hajekae Smiley and Moser, 1985, H. magowskii Khaustov, 2001, and Tarsonemus crassus (Schaarschmidt, 1959). The genus Heterotarsonemus is newly recorded in Asia. The new record of H. hajekae is the second ever known in the world and H. magowskii is now established as new phoront of the bark …

Evaluation Of A Bioprocessed Soybean Meal On Nursery Pig Immune Status And Disease Resistance, Jacob R. Koepke

Electronic Theses and Dissertations

Weaning is a stressful time in a piglet’s life that can have negative impacts on performance and health if not managed properly. The objective of this research was to evaluate the effects of a bioprocessed SBM alone or in combination with spray-dried plasma (SDP) or fishmeal (FM) on immune response at weaning with no imminent disease threat and during a porcine reproductive and respiratory virus (PRRSV) challenge. In the first trial, 239 pigs (initial BW 6.56 ± 0.87 kg, 21 d of age) were used in a 35-d study and allotted to one of 4 dietary treatments (10 pens/trt) according …

Growth Potential And Genetic Diversity Of Yellow Perch In South Dakota, Alex J. Rosburg

Electronic Theses and Dissertations

Yellow Perch Perca flavescens represent a valued sport fish throughout their range and are an important prey species for piscivorous fishes. In South Dakota, two distinct population types of Yellow Perch have been characterized that differ in growth, survival, and recruitment patterns. Fast growth populations exhibit high growth rates, high mortality, low population density, and inconsistent recruitment. In contrast, slow growth populations are characterized by reduced growth rates, low mortality, high population density, and relatively consistent recruitment. The role of genetics in contributing to these population characteristics is currently unknown. To address these questions, I used high-throughput restriction-site associated DNA …

The Effects Of Methamphetamine Exposure On Cardiovascular Development In Combination With Hypoxia In Danio Rerio, Sarah Donaldson

Williams Honors College, Honors Research Projects

The purpose of this study was to determine the effects of methamphetamine combined with hypoxia on the development and function of the cardiovascular system in Danio rerio embryos. It was hypothesized that the combined effect of the drug and decreased oxygen concentration would result in decreased cardiac parameters due to underdevelopment of the ventricle and vessels resulting from cardiomyopathy and lack of blood flow to tissues. It was found that methamphetamine exposure correlated to an increase in stroke volume, caudal artery and vein diameters and RBC velocities alone, while having a multiplicative effect of increasing arterial RBC velocity when combined …

Strategies For Evading Blackbird Damage, George M. Linz, Page E. Klug

United States Department of Agriculture Wildlife Services: Staff Publications

Foraging blackbird flocks have great mobility as they search for food that is plentiful, is easily accessed, and has a high nutritional value. Ripening corn, rice, and sunflower fit those criteria, as does seeded rice. The birds will move from field to field to find the ideal combination of energy spent to discover food versus the energy value of the food (Pyke et al. 1977). An extraordinary effort is often needed to actively move the birds from a foraging location with a high positive value (e.g., close to roost and early ripening sunflower) versus a location with a I~w value …

Automating The Milking Process Within A Grass-Based System, John Shortall

Theses

The successful integration of automatic milking (AM) and grazing has resulted in AM becoming a feasible alternative to conventional milking (CM) in pasture-based systems. The objective of this thesis was to establish (i) the social, environmental and economic effects of adopting AM technology and (ii) the factors affecting cow traffic, which once the AM is adopted, can also impact on the sustainability of AM. A theme across this thesis is the examination of AM in the context of a seasonal pasture-based milk production system. Electricity and water meters were installed on seven AM fanns. Milking and livestock/^miscellaneous processes were the …

The Development Of New Molecular Tools To Detect Mycobacterium Avium Subspecies Paratuberculosis From A Bovine Faecal Environment By Real-Time Pcr, Marcel De Kruijf

Theses

The slow-growing intracellular pathogen Mycobacterium avium subspecies paratuberculosis (MAP) causes Johne’s disease in domesticated and wild ruminants. Johne’s disease inflicts severe annual economic losses to the dairy industry worldwide. This thesis is divided into five chapters that consist of a literature review' chapter and four experimental chapters focusing on MAP strain genotyping and the development of novel molecular MAP detection tools using real-time PCR. Chapter 1 describes published information regarding MAP characteristics, Johne’s disease, MAP genomes, available MAP detection methods, MAP epidemiology and genotyping.

To efficiently control and monitor MAP infection, molecular t>ping of MAP strains provides extensive knowledge …

The Breeding Bird Community Of A Remnant Urban Woodland In Mcallen, Texas, John S. Brush, Alexis Racelis, Timothy Brush

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

We conducted a breeding bird survey of a remnant thorn-forest at McAllen Nature Center in 2015 and 2016 to assess the breeding bird community and compare it to that of a larger, exurban refuge. We recorded 37 territorial species in McAllen Nature Center, including 15 species not reported at the exurban tract. Thirteen of these predominantly used the more open, human -maintained habitats in the northern and western sides of the park. The presence of many common thorn-forest birds, including a subset of the regions “South Texas specialty” species, is encouraging. Small remnant woodlands such as McAllen Nature Center may …

Habitat Use By Wintering Passerines In Fire-Managed Forests Along The U.S. Gulf Coast, Justin Michael Michaud

Online Theses and Dissertations

Coastal habitats are being impacted by land development, fragmentation, and disturbance related to climate change. The remaining natural areas need to use planned management that may, in some cases, include the use of prescribed fire to maintain habitat quality. Numerous species of passerines, including some with declining populations, use the Gulf Coast as a wintering area, and some depend on habitats managed by fire. To provide information for land managers, I studied the winter bird community at Naval Live Oaks in Gulf Islands National Seashore with two primary objectives: (1) to describe the distribution, abundance, and diversity of the non-breeding …

Local Impacts Of White-Nose Syndrome On The Foraging Ecology Of Insectivorous Bats, Shelby Fulton

Online Theses and Dissertations

Lepidoptera are a core resource for many of North America's insectivorous bats. These predators consume Lepidoptera of varying sizes, and some bat species remove the wings prior to consumption. Selection of larger prey and subsequent wing removal may allow bats to optimize the energetic value afforded by Lepidoptera. In Chapter 1, I explore the relationships between caloric yield, body size, and wing presence. Laboratory-reared Trichoplusia ni moths were grouped into large and small size classes, and wings were removed from half the moths in each size class. Bomb calorimetry was used to determine the gross heat (cal/g) of moths in …

Investigation Of Effects Of Fucoidan Polysaccharides Extracted From Twospecies Of Padina On The Wound-Healing Process In The Rat, Moazameh Kordjazi, Bahareh Shabanpour, Ebrahim Zabihi, Mohammad Ali Faramarzi, Hassan Ahmadi Gavlighi, Seyed Mohammad Amin Feghhi, Seyed Abbas Hosseini

Turkish Journal of Veterinary & Animal Sciences

Seaweeds contains different types of polysaccharides with high abilities. The aim of this study was to determine the potential of fucoidan polysaccharides for wound-healing properties. Fucoidans of two species of Padina (P. tetrastromatica and P. boergesenii), collected from the Persian Gulf northern coastal area, were extracted and analyzed using high-performance anion-exchange chromatography. Purified fucoidans were used to prepare a 2% topical ointment. Under aseptic conditions, two identical paravertebral full-thickness skin wounds (either by burn or excision) were made in 40 anesthetized male rats allocated into 4 groups. Either fucoidan ointments or the vehicle (ointment base) were applied to rats' wounds …

Effects Of Season On Semen Parameters And Relationships Between Selected Semen Characteristics In Hypor Boars, Krzysztof Górski, Stanislaw Kondracki, Anna Wysokinska

Turkish Journal of Veterinary & Animal Sciences

The aim of this study was to evaluate the effect of the season of the year on the quality of Hypor boar semen and to determine the correlations between selected semen characteristics in particular seasons. Ejaculates from Hypor boars were analyzed for volume, sperm concentration, percentage of spermatozoa with normal motility, total number of spermatozoa, and the number of insemination doses per ejaculate. Microscopic slides were prepared from semen samples. Each sample was evaluated for the morphology of spermatozoa. Spermatozoa with normal morphology were counted, as well as those with both major and minor abnormalities. Spermatozoa were measured for morphometric …

Extraskeletal Chondroblastic Osteosarcoma Of The Subcutaneous Tissue In A Maltese Dog, Byungjoon Seung, Junghyung Ju, Seunghee Cho, Soohyeon Kim, Hwan Choi, Junghyang Sur

Turkish Journal of Veterinary & Animal Sciences

A 10-year-old spayed female Maltese dog presented to a local animal hospital with a subcutaneous mass (4 x 3 x 3 cm) in the right shoulder region. The mass was well circumscribed, with soft tissue opacity and variable levels of mineralization, but with no bony involvement in radiography. The mass was surgically removed. Upon histological examination, the mass consisted of malignant mesenchymal cells that had produced a chondroid matrix and osteoid. Round to polygonal neoplastic cells with large nuclei showed moderate anisokaryosis and variable numbers of mitotic figures. The tumor cells were positive for vimentin and osteocalcin and negative for …

Striped Tail Darter Project, Zeina Sleiman

Summer Community of Scholars Posters (RCEU and HCR Combined Programs)

No abstract provided.

Skeletal Stiffening In An Amphibious Fish Out Of Water Is A Response To Increased Body Weight, Andy J. Turko, Dietmar KüLtz, Douglas S. Fudge, Roger P. Croll, Frank M. Smith, Matthew R. Stoyek, Patricia A. Wright

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Terrestrial animals must support their bodies against gravity, while aquatic animals are effectively weightless because of buoyant support from water. Given this evolutionary history of minimal gravitational loading of fishes in water, it has been hypothesized that weight-responsive musculoskeletal systems evolved during the tetrapod invasion of land and are thus absent in fishes. Amphibious fishes, however, experience increased effective weight when out of water – are these fishes responsive to gravitational loading? Contrary to the tetrapod-origin hypothesis, we found that terrestrial acclimation reversibly increased gill arch stiffness (∼60% increase) in the amphibious fish Kryptolebias marmoratus when loaded normally by gravity, …

Department Of Fisheries Annual Report To Parliament 2016/17, Government Of Western Australia Department Of Fisheries

Department of Fisheries Annual Reports

This annual report provides an overview of the Department and its operations for the financial year ended 30 June 2017. It has been prepared in accordance with the requirements of the Financial Management Act 2006, the Fish Resources Management Act 1994 and the Public Sector Commission’s Annual reporting framework – 2016/17 reporting year.

Genomic Perspectives On Amphibian Evolution Across Multiple Phylogenetic Scales, Paul Michael Hime

Theses and Dissertations--Biology

Genomes provide windows into the evolutionary histories of species. The recent accessibility of genome-scale data in non-model organisms and the proliferation of powerful statistical models are now providing unprecedented opportunities to uncover evolutionary relationships and to test hypotheses about the processes that generate and maintain biodiversity. This dissertation work reveals shallow-scale species boundaries and population genetic structure in two imperiled groups of salamanders and demonstrates that the number and information content of genomic regions used in species delimitation exert strong effects on the resulting inferences. Genome scans are employed to test hypotheses about the mechanisms of genetic sex determination in …

Rainbow Peacock Spiders Inspire Miniature Superiridescent Optics, Bor-Kai Hsiung, Radwanul Hasan Siddique, Doekele G. Stavenga, Jürgen C. Otto, Michael C. Allen, Ying Liu, Yongfeng Lu, Dimitri D. Deheyn, Matthew D. Shawkey, Todd A. Blackledge

Department of Electrical and Computer Engineering: Faculty Publications

Colour produced by wavelength-dependent light scattering is a key component of visual communication in nature and acts particularly strongly in visual signalling by structurallycoloured animals during courtship. Two miniature peacock spiders (Maratus robinsoni and M. chrysomelas) court females using tiny structured scales (~ 40 × 10 μm²) that reflect the full visual spectrum. Using TEM and optical modelling, we show that the spiders’ scales have 2D nanogratings on microscale 3D convex surfaces with at least twice the resolving power of a conventional 2D diffraction grating of the same period. Whereas the long optical path lengths required …

Pseudopecoelus Mccauleyi N. Sp. And Podocotyle Sp. (Digenea: Opecoelidae) From The Deep Waters Off Oregon And British Columbia With An Updated Key To The Species Of Pseudopecoelus Von Wicklen, 1946 And Checklist Of Parasites From Lycodes Cortezianus (Perciformes: Zoarcidae), Charles K. Blend, Norman O. Dronen, Gábor R. Rácz, Scott Lyell Gardner

Scott L. Gardner Publications

Pseudopecoelus mccauleyi n. sp. (Opecoelidae: Opecoelinae) is described from the intestine of the bigfin eelpout, Lycodes cortezianus (Gilbert, 1890) (Perciformes: Zoarcidae), collected at 200–800 m depths in the northeastern Pacific Ocean off Oregon and Vancouver Island, British Columbia. The new species is distinguished by possessing a unique combination of the following diagnostic characters: vitelline fields that extend to the posterior margin of the ventral sucker; a slender, tubular and sinuous seminal vesicle that extends some distance into the hindbody; an unspecialized, protuberant ventral sucker; a genital pore at pharynx level; lobed to deeply multilobed testes; a lobed ovary; and an …

Review Of Bird Brain: An Exploration Of Avian Intelligence By Nathan Emery, Alan B. Bond

Avian Cognition Papers

Over the past 30 years, the study of bird behavior has been completely transformed by the ongoing revolution in cognitive psychology, opening up wholly new perspectives on the mental processes underlying such areas as foraging decisions, social intelligence, problem solving, memory encoding, and communication. Although these studies have contributed to a number of recent popular books, until now there has been no attempt to integrate avian cognition and recent findings in avian neuroanatomy and endocrinology into a single account that is attractive and accessible to a general readership. It is a steep challenge, but Nathan Emery has undertaken it in …

Importance Of The Antenniform Legs, But Not Vision, For Homing By The Neotropical Whip Spider Paraphrynus Laevifrons, Verner P. Bingman, Jacob M. Graving, Eileen Hebets, Daniel D. Wiegmann

Eileen Hebets Publications

Amblypygids, or whip spiders, are nocturnal, predatory arthropods that display a robust ability to navigate to their home refuge. Prior field observations and displacement studies in amblypygids demonstrated an ability to home from distances as far away as 10 m. In the current study, micro-transmitters were used to take morning position fixes of individual Paraphrynus laevifrons following an experimental displacement of 10 m from their home refuge. The intention was to assess the relative importance of vision compared with sensory input acquired from the antenniform legs for navigation as well as other aspects of their spatial behavior. Displaced individuals were …

Spatially Biased Dispersal Of Acorns By A Scatter-Hoarding Corvid May Accelerate Passive Restoration Of Oak Habitat On California’S Largest Island, Mario B. Pesendorfer, T. Scott Sillett, Scott A. Morrison

School of Biological Sciences: Faculty Publications

Scatter hoarding by corvids (crows, jays, magpies, and nutcrackers) provides seed dispersal for many large-seeded plants, including oaks and pines. When hoarding seeds, corvids often choose nonrandom locations throughout the landscape, resulting in differential survival of seeds. In the context of habitat restoration, such disproportional storing of seeds in areas suitable for germination and establishment can accelerate expansion and recovery of large-seeded tree populations and their associated ecosystems. Here, we investigate the spatial preferences of island scrub jays Aphelocoma insularis during scatter hoarding of acorns (Quercus spp.) on Santa Cruz Island. We use a large behavioral data set on …

Rewiring Metabolism Under Oxygen Deprivation: Naked Mole-Rats Evolved A Means To Cope With Anoxia, Jay F. Storz, Grant B. Mcclelland

Jay F. Storz Publications

When faced with a reduced availability of oxygen in the environment (hypoxia), vertebrates can make a variety of respiratory, cardiovascular, and hematological adjustments to ensure an uninterrupted supply of oxygen to the cells of metabolizing tissues (1, 2). These are adaptive solutions for “aerobic organisms in an aerobic world” (3). Coping with the complete absence of oxygen (anoxia) requires more fundamental alterations of cellular metabolism that are typically nothing more than emergency stopgap measures to buy time until the oxygen supply is (hopefully) reestablished (4). On page 307 of this issue [Science 356 (6335)], Park et al. (5) identify a …

Biotic Interchange Has Structured Western Hemisphere Mammal Communities, Danielle Fraser, S. Kathleen Lyons

School of Biological Sciences: Faculty Publications

Aim.— Many hypotheses posit that species-rich tropical communities are dominated by speciesspecies interactions, apparent as competitive exclusion or character displacement, whereas species-poor temperate communities are dominated by species-environment interactions. Recent studies demonstrate a strong influence of macroevolutionary and biogeographic factors. We simultaneously test for the effects of species interactions, climate, and biotic interchange on Western Hemisphere mammal communities using a phylogenetic and functional diversity approach.

Location.— Western Hemisphere.

Time period.— Modern

Major taxa studied.— Mammalia

Methods.— Using Western Hemisphere mammal distributional and body mass data, we calculate body mass dispersion, phylogenetic diversity (Net Relatedness Index), and assemblage-averaged rates of co-occurrence …

Using Pentosidine And Hydroxyproline To Predict Age And Sex In An Avian Species, Brian S. Dorr, Randal S. Stahl, Katie C. Hanson-Dorr, Carol A. Furcolow

United States Department of Agriculture Wildlife Services: Staff Publications

All living organisms are subject to senescence accompanied by progressive and irreversible physiological changes. The error damage and cross-linking theories suggest that cells and tissues are damaged by an accumulation of cross-linked proteins, slowing down bodily processes and resulting in aging. A major category of these cross-linked proteins are compounds called advanced glycation end products (AGEs). We investigated the relationship between accumulation of the AGE, pentosidine (Ps), and hydroxyproline (HYP) a post-translationally modified amino acid, with age, sex, and breeding status (breeder/ nonbreeder) from skin samples of known age (i.e., banded as fledglings), free-ranging Double-crested Cormorants (Phalacrocorax auritus, …

The Future Of Blackbird Management Research, Page E. Klug

United States Department of Agriculture Wildlife Services: Staff Publications

Human society values birds for their intrinsic and aesthetic value as well as the ecosystem services they provide as pollinators, consumers of pests, and distributors of nutrients and seeds (Wenny et al. 2011). At the same time, conflict between birds and humans is an age-old phenomenon that has persisted as society has transformed and the scale of agriculture has expanded (Conover 2002). Managing conflict between birds and agriculture is challenging for many reasons. Foremost, the need to consider both human welfare and conservation of protected bird species is paramount, with nonlethal management methods preferred to lethal measures from societal, economical, …