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Effects Of Microtubule Stabilizing And Recovery Agents On Vitrified Bovine Oocytes, Emily Dzekunskas Mar 2021

Effects Of Microtubule Stabilizing And Recovery Agents On Vitrified Bovine Oocytes, Emily Dzekunskas

LSU Master's Theses

Oocyte vitrification, while beneficial for research and species conservation, has limited success due to cryoinjury to the meiotic spindle. This study aimed to evaluate treatments to improve meiotic spindle recovery after vitrification by treating bovine oocytes with either a microtubule stabilizing agent, or a microtubule recovery agent. In the first two experiments, Taxol and epothilone B were used to treat bovine oocytes before vitrification. Both compounds have microtubule stabilizing properties and are known antimitotic compounds commonly used in cancer treatment. Oocytes were incubated with one of the microtubule stabilizing agents for 15 minutes before vitrification at one of three concentrations …


First Description Of Deep Benthic Habitats And Communities Of Oceanic Islands And Seamounts Of The Nazca Desventuradas Marine Park, Chile, Jan M. Tapia-Guerra, Ariadna Mecho, Erin E. Easton, María De Los Ángeles Gallardo, Matthias Gorny, Javier Sellanes Mar 2021

First Description Of Deep Benthic Habitats And Communities Of Oceanic Islands And Seamounts Of The Nazca Desventuradas Marine Park, Chile, Jan M. Tapia-Guerra, Ariadna Mecho, Erin E. Easton, María De Los Ángeles Gallardo, Matthias Gorny, Javier Sellanes

School of Earth, Environmental, & Marine Sciences Faculty Publications

Seamounts and oceanic islands of the Chilean Exclusive Economic Zone at the intersection of the Nazca and Salas y Gómez ridges lie within one of the least explored areas in the world. The sparse information available, mainly for seamounts outside Chilean jurisdiction and shallow-water fauna of the Desventuradas Islands, suggests that the area is a hotspot of endemism. This apparent uniqueness of the fauna motivated the creation of the large Nazca-Desventuradas Marine Park (NDMP, ~ 300,000 km2) around the small islands San Felix and San Ambrosio in 2015. We report for the first time a detailed description of benthic microhabitats …


Fish Associations With Shallow Water Subsea Pipelines Compared To Surrounding Reef And Soft Sediment Habitats, Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey Mar 2021

Fish Associations With Shallow Water Subsea Pipelines Compared To Surrounding Reef And Soft Sediment Habitats, Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey

Fisheries Research Articles

Offshore decommissioning activities are expected to increase as oil and gas subsea infrastructure becomes obsolete. Decisions on decommissioning alternatives will benefit from quantifying and understanding the marine communities associated with these structures. As a case study, fish assemblages associated with an inshore network of subsea pipelines located on the North West shelf of Western Australia were compared to those in surrounding natural reef and soft sediment habitats using remotely operated vehicles fitted with a stereo-video system (stereo-ROVs). The number of species, the abundance, biomass, feeding guild composition and the economic value of fishes were compared among habitats. The community composition …


Fish Associations With Shallow Water Subsea Pipelines Compared To Surrounding Reef And Soft Sediment Habitats, Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey Mar 2021

Fish Associations With Shallow Water Subsea Pipelines Compared To Surrounding Reef And Soft Sediment Habitats, Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey

Fisheries Research Articles

Offshore decommissioning activities are expected to increase as oil and gas subsea infrastructure becomes obsolete. Decisions on decommissioning alternatives will benefit from quantifying and understanding the marine communities associated with these structures. As a case study, fish assemblages associated with an inshore network of subsea pipelines located on the North West shelf of Western Australia were compared to those in surrounding natural reef and soft sediment habitats using remotely operated vehicles fitted with a stereo-video system (stereo-ROVs). The number of species, the abundance, biomass, feeding guild composition and the economic value of fishes were compared among habitats. The community composition …


Protura (Arthropoda: Hexapoda) In Slovenian Caves, Loris Galli, Franc Janžekovič, Peter Kozel, Tone Novak Mar 2021

Protura (Arthropoda: Hexapoda) In Slovenian Caves, Loris Galli, Franc Janžekovič, Peter Kozel, Tone Novak

International Journal of Speleology

Protura is a small class of Hexapoda, generally poorly known, and rather scarce data on its occurrence in caves are scattered throughout literature on fauna in caves and in some papers on Protura. Although the cave-dwelling fauna is relatively well studied in Slovenia, published records on Protura are rare. In this paper, data on the occurrence and abundance of Protura in Slovenian caves are considered. Various statistical analyses were performed to compare caves with Protura to those without in 60 intensively monitored cavities to detect any differences in the selected environmental conditions. No significant difference was obtained. Samples collected from …


Lymphocyte Proteomics For Monitoring Long Term Immune System Dynamics, Michaela Mccown Mar 2021

Lymphocyte Proteomics For Monitoring Long Term Immune System Dynamics, Michaela Mccown

Undergraduate Honors Theses

Time dependent change in lymphocytes provides a necessary background for monitoring the development of Chronic Lymphocytic Leukemia from asymptomatic to malignant. Several bulk proteomics studies characterize differences between tumor cells and healthy B cells, yet the transition to symptomatic disease is not well understood. This could be shown by a longitudinal study beginning with asymptomatic patients if the rare tumor cells in early stages can be isolated from small volume blood draws and effectively characterized with few cells, such as was done here using healthy B cells to provide a baseline for such studies to discriminate routine fluctuation from pathogenic …


Isolated Reefs Support Stable Fish Communities With High Abundances Of Regionally Fished Species, Matthew J. Birt, Katherine Cure, Shaun Wilson, Stephen J. Newman, Euan S. Harvey, Mark G. Meekan, Conrad W. Speed, Andrew Heyward, Jordan Goetze, James Gilmour Mar 2021

Isolated Reefs Support Stable Fish Communities With High Abundances Of Regionally Fished Species, Matthew J. Birt, Katherine Cure, Shaun Wilson, Stephen J. Newman, Euan S. Harvey, Mark G. Meekan, Conrad W. Speed, Andrew Heyward, Jordan Goetze, James Gilmour

Fisheries Research Articles

Anthropogenic impacts at isolated and inaccessible reefs are often minimal, offering rare opportunities to observe fish assemblages in a relatively undisturbed state. The remote Rowley Shoals are regarded as one of the healthiest reef systems in the Indian Ocean with demonstrated resilience to natural disturbance, no permanent human population nearby, low visitation rates, and large protected areas where fishing prohibitions are enforced. We used baited remote underwater video systems (BRUVS) to quantify fish assemblages and the relative abundance of regionally fished species within the lagoon, on the slope and in the mesophotic habitat at the Rowley Shoals at three times …


Pioneer Science And The Great Plagues: How Microbes, War, And Public Health Shaped Animal Health, Norman F. Cheville, Purdue University Press Mar 2021

Pioneer Science And The Great Plagues: How Microbes, War, And Public Health Shaped Animal Health, Norman F. Cheville, Purdue University Press

Purdue University Press Books

Pioneer Science and the Great Plagues covers the century when infectious plagues—anthrax, tuberculosis, tetanus, plague, smallpox, and polio—were conquered, and details the important role that veterinary scientists played. The narrative is driven by astonishing events that centered on animal disease: the influenza pandemic of 1872, discovery of the causes of anthrax and tuberculosis in the 1880s, conquest of Texas cattle fever and then yellow fever, German anthrax attacks on the United States during World War I, the tuberculin war of 1931, Japanese biological warfare in the 1940s, and today’s bioterror dangers.

Veterinary science in the rural Midwest arose from agriculture, …


Population Fluctuation And Diurnal Time Budgeting Of White-Headed Duck (Oxyura Leucocephala) During Winter At Garaet Hadj Tahar (Skikda, North East Algerian), Merzoug Seyf Eddine, Abdi Soumia, Bara Mouslim, Houhamdi Moussa Mar 2021

Population Fluctuation And Diurnal Time Budgeting Of White-Headed Duck (Oxyura Leucocephala) During Winter At Garaet Hadj Tahar (Skikda, North East Algerian), Merzoug Seyf Eddine, Abdi Soumia, Bara Mouslim, Houhamdi Moussa

Journal of Bioresource Management

This study was focused on the ecology and behavior of the White-headed Duck (Oxyura leucocephala) at Garaet Hadj Tahar (Guerbes-Sanhadja, North East of Algeria). Sampling was carried out during two wintering seasons (2017-2018 and 2018-2019). High number of this duck was recorded in 2018/19 (350 individuals). We observed two Oxyura population, the first sedentary, and the second, hosted the Garaet during the wintering season. Diurnal time budget was dominated by the comfort activities the sleeping with a rate of 39.13%. Following by swimming (37.76%), feeding (17.59%) grooming (4.58%), courtship ritual (0.56%) and flying (0.38%). The feeding of white-headed …


Microhabitat Selection Of A Sicilian Subterranean Woodlouse And Its Implications For Cave Management, Giuseppe Nicolosi, Stefano Mammola, Salvatore Costanzo, Giorgio Sabella, Rosolino Cirrincione, Giovanni Signorello, Marco Isaia Mar 2021

Microhabitat Selection Of A Sicilian Subterranean Woodlouse And Its Implications For Cave Management, Giuseppe Nicolosi, Stefano Mammola, Salvatore Costanzo, Giorgio Sabella, Rosolino Cirrincione, Giovanni Signorello, Marco Isaia

International Journal of Speleology

Human activities in subterranean environments can affect different ecosystem components, including the resident fauna. Subterranean terrestrial invertebrates are particularly sensitive to environmental change, especially microclimatic variations. For instance, microclimate modifications caused by the visitors may directly affect local fauna in caves opened to the public. However, since numerous factors act synergistically in modulating the distribution and abundance of subterranean species, it remains challenging to differentiate the impact of human intervention from that of other factors. Therefore, evidence of the impact of tourism on cave invertebrate fauna remains scarce. Over a year and with approximately two visits a month, we investigated …


Sex-Specific Variation Of Social Play In Wild Immature Tibetan Macaques, Macaca Thibetana, Tong Wang, Xi Wang, Paul A. Garber, Bing-Hua Sun, Lixing Sun, Dong-Po Xia, Jin-Hua Li Mar 2021

Sex-Specific Variation Of Social Play In Wild Immature Tibetan Macaques, Macaca Thibetana, Tong Wang, Xi Wang, Paul A. Garber, Bing-Hua Sun, Lixing Sun, Dong-Po Xia, Jin-Hua Li

Biology Faculty Scholarship

Theories proposed to explain social play have centered on its function in establishing social relationships critical for adulthood, its function in developing motor skills needed to survive, and promoting cognitive development and social learning. In this study, we compared variations in social play among infant and juvenile male and female Macaca thibetana. Given that this species is characterized by female philopatry and male dispersal, we hypothesized that immature females use social play as a mechanism to develop bonds that persist through adulthood whereas immature males use play to develop social skills needed to successfully enter new groups. The results indicated …


Caracuel_ Spiny Dogfish (Squalus Acanthias) Jaw, Nicolas M. Caracuel, David W. Kerstetter Mar 2021

Caracuel_ Spiny Dogfish (Squalus Acanthias) Jaw, Nicolas M. Caracuel, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Female Spiny Dogfish (Squalus acanthias) jaw collected in MBIO 3910 Lab on 11/03/2021 by Nicolas M. Caracuel.

2 cm tall at the center/middle of the jaw.

3.1cm tall at the hinges.

7.9 cm long from hinge to hinge.


Maternal Vitamin And Mineral Supplementation And Rate Of Maternal Weight Gain Affects Placental Expression Of Energy Metabolism And Transport-Related Genes, Wellison J. S. Diniz, Lawrence P. Reynolds, Pawel P. Borowicz, Alison K. Ward, Kevin K. Sedivec, Kacie L. Mccarthy, Cierrah J. Kassetas, Friederike Baumgaertner, James D. Kirsch, Sheri T. Dorsam, Tammi L. Neville, J. Chris Forcherio, Ronald R. Scott, Joel S. Caton, Carl R. Dahlen Mar 2021

Maternal Vitamin And Mineral Supplementation And Rate Of Maternal Weight Gain Affects Placental Expression Of Energy Metabolism And Transport-Related Genes, Wellison J. S. Diniz, Lawrence P. Reynolds, Pawel P. Borowicz, Alison K. Ward, Kevin K. Sedivec, Kacie L. Mccarthy, Cierrah J. Kassetas, Friederike Baumgaertner, James D. Kirsch, Sheri T. Dorsam, Tammi L. Neville, J. Chris Forcherio, Ronald R. Scott, Joel S. Caton, Carl R. Dahlen

Department of Animal Science: Faculty Publications

Maternal nutrients are essential for proper fetal and placental development and function. However, the effects of vitamin and mineral supplementation under two rates of maternal weight gain on placental genome-wide gene expression have not been investigated so far. Furthermore, biological processes and pathways in the placenta that act in response to early maternal nutrition are yet to be elucidated. Herein, we examined the impact of maternal vitamin and mineral supplementation (from pre-breeding to day 83 post-breeding) and two rates of gain during the first 83 days of pregnancy on the gene expression of placental caruncles (CAR; maternal placenta) and cotyledons …


Recent Genetic Connectivity And Clinal Variation In Chimpanzees, Jack D. Lester, Linda Vigilant, Paolo Gratton, Maureen S. Mccarthy, Christopher D. Barratt, Paula Dieguez, Anthony Agbor, Paula Alvarez-Varona, Samuel Angedakin, Emmanuel Ayuk Ayimisin, Emma Bailey, Mattia Bessone, Gregory Brazzola, Rebecca Chancellor, Heather Cohen, Emmanuel Danquah, Tobias Deschner, Villard Ebot Egbe, Manasseh Eno-Nku, Annemarie Goedmakers, Anne-Celine Granjon, Josephine Head, Daniela Hedwig, R. Adriana Hernandez-Aguilar, Kathryn J. Jeffery, Sorrel Jones, Jessica Junker, Parag Kadam, Michael Kaiser, Ammie K. Kalan, Laura Kehoe, Ivonne Kienast, Kevin E. Langergraber, Juan Lapuente, Anne Laudisoit, Kevin Lee, Sergio Marrocoli, Vianet Mihindou, David Morgan, Geoffrey Muhanguzi, Emily Neil, Sonia Nicholl, Christopher Orbell, Lucy Jayne Ormsby, Liliana Pacheco, Alex Piel, Martha M. Robbins, Aaron S. Rundus, Crickette Sanz, Lilah Sciaky, Alhaji M. Siaka, Veronika Staedele, Fiona Stewart, Nikki Tagg, Els Ton, Joost Van Schijndel, Magloire Kambale Vyalengerera, Erin G. Wessling, Jacob Willie, Roman M. Wittig, Yisa Ginath Yuh, Kyle Yurkiw, Klaus Zuberbuehler, Christophe Boesch, Hjalmar S. Kuehl, Mimi Arandjelovic Mar 2021

Recent Genetic Connectivity And Clinal Variation In Chimpanzees, Jack D. Lester, Linda Vigilant, Paolo Gratton, Maureen S. Mccarthy, Christopher D. Barratt, Paula Dieguez, Anthony Agbor, Paula Alvarez-Varona, Samuel Angedakin, Emmanuel Ayuk Ayimisin, Emma Bailey, Mattia Bessone, Gregory Brazzola, Rebecca Chancellor, Heather Cohen, Emmanuel Danquah, Tobias Deschner, Villard Ebot Egbe, Manasseh Eno-Nku, Annemarie Goedmakers, Anne-Celine Granjon, Josephine Head, Daniela Hedwig, R. Adriana Hernandez-Aguilar, Kathryn J. Jeffery, Sorrel Jones, Jessica Junker, Parag Kadam, Michael Kaiser, Ammie K. Kalan, Laura Kehoe, Ivonne Kienast, Kevin E. Langergraber, Juan Lapuente, Anne Laudisoit, Kevin Lee, Sergio Marrocoli, Vianet Mihindou, David Morgan, Geoffrey Muhanguzi, Emily Neil, Sonia Nicholl, Christopher Orbell, Lucy Jayne Ormsby, Liliana Pacheco, Alex Piel, Martha M. Robbins, Aaron S. Rundus, Crickette Sanz, Lilah Sciaky, Alhaji M. Siaka, Veronika Staedele, Fiona Stewart, Nikki Tagg, Els Ton, Joost Van Schijndel, Magloire Kambale Vyalengerera, Erin G. Wessling, Jacob Willie, Roman M. Wittig, Yisa Ginath Yuh, Kyle Yurkiw, Klaus Zuberbuehler, Christophe Boesch, Hjalmar S. Kuehl, Mimi Arandjelovic

Psychology Faculty Publications

Much like humans, chimpanzees occupy diverse habitats and exhibit extensive behavioural variability. However, chimpanzees are recognized as a discontinuous species, with four subspecies separated by historical geographic barriers. Nevertheless, their range-wide degree of genetic connectivity remains poorly resolved, mainly due to sampling limitations. By analyzing a geographically comprehensive sample set amplified at microsatellite markers that inform recent population history, we found that isolation by distance explains most of the range-wide genetic structure of chimpanzees. Furthermore, we did not identify spatial discontinuities corresponding with the recognized subspecies, suggesting that some of the subspecies-delineating geographic barriers were recently permeable to gene flow. …


Effects Of Hierarchical Steepness On Grooming Patterns In Female Tibetan Macaques (Macaca Thibetana), Dong-Po Xia, Xi Wang, Paul A. Garber, Bing-Hua Sun, Lori K. Sheeran, Lixing Sun, Jin-Hua Li Mar 2021

Effects Of Hierarchical Steepness On Grooming Patterns In Female Tibetan Macaques (Macaca Thibetana), Dong-Po Xia, Xi Wang, Paul A. Garber, Bing-Hua Sun, Lori K. Sheeran, Lixing Sun, Jin-Hua Li

Anthropology and Museum Studies Faculty Scholarship

Hierarchical steepness, defined as status asymmetries among conspecifics living in the same group, is not only used as a main characteristic of animal social relationships, but also represents the degree of discrepancy between supply and demand within the framework of biological market theory. During September and December 2011, we studied hierarchical steepness by comparing variation in grooming patterns in two groups of Tibetan macaques (Macaca thibetana), a primate species characterized by a linear dominance hierarchy. Using a focal sampling method, we collected behavioral data from two provisioned, free-ranging groups (YA1 and YA2) at Mt. Huangshan, China. We found …


Effects Of Varying Heat Indexes On Habitat Utilization And Behavior On Captive Red-Ruffed Lemurs (Varecia Rubra), Jeffrey Gammon Mar 2021

Effects Of Varying Heat Indexes On Habitat Utilization And Behavior On Captive Red-Ruffed Lemurs (Varecia Rubra), Jeffrey Gammon

The Pegasus Review: UCF Undergraduate Research Journal

The two captive red-ruffed lemurs (Varecia rubra) at the Central Florida Zoo experienced a more temperate climate and utilized a differing habitat than they would in their native range, Madagascar. Proper management of the species in captivity is crucial for its long-term survival as they are critically endangered. Over a four month period, heat index temperature, lemur behavior, and habitat utilization data were collected via an instantaneous scan sample. Variables were analyzed to characterize how variations in heat index alter habitat utilization and behavior of the captive lemurs. As the heat index increased, habitat use became more restricted …


Attainment And Maintenance Of Pubertal Cyclicity May Predict Reproductive Longevity In Beef Heifers, Sarah R. Nafziger, Sarah C. Tenley, Adam F. Summers, Mohamed A. Abedal-Majed, Mariah Hart, Jeffrey W. Bergman, Scott G. Kurz, John S. Davis, Jennifer R. Wood, Andrea S. Cupp Mar 2021

Attainment And Maintenance Of Pubertal Cyclicity May Predict Reproductive Longevity In Beef Heifers, Sarah R. Nafziger, Sarah C. Tenley, Adam F. Summers, Mohamed A. Abedal-Majed, Mariah Hart, Jeffrey W. Bergman, Scott G. Kurz, John S. Davis, Jennifer R. Wood, Andrea S. Cupp

Department of Animal Science: Faculty Publications

We hypothesized the manner that heifers achieve puberty may indicate their future reproductive longevity. Heifers with discontinued or delayed cyclicity during puberty attainment may have irregular reproductive cycles, anovulation, and infertility in their first breeding season contributing to a shorter reproductive lifespan. Therefore, plasma progesterone (P4) was measured from weaning to breeding on 611 heifers born 2012–2017 and four pubertal classifications were identified: (1) Early; P4 ≥ 1 ng/ml < March 12 with continued cyclicity, (2) Typical; P4 ≥ 1 ng/ml ≥ March 12 with continued cyclicity, (3) Start-Stop; P4 ≥ 1 ng/ml but discontinued cyclicity, and (4) Non-Cycling; no P4 ≥ 1 ng/ml. Historical herd records indicated that 25% of heifers achieved puberty prior to March 12th in the 10 years prior to the study. Start-Stop and Non-Cycling yearling heifers were lighter indicating reduced growth and reproductive maturity traits compared with Early/Typical heifers. In addition, Non-Cycling/Start-Stop heifers were less responsive to prostaglandin F2 alpha (PGF2α) to initiate estrous behavior and ovulation to be artificially inseminated. Non-Cycling heifers had fewer reproductive tract score-5 and reduced numbers of calves born in the first 21-days-ofcalving during their first breeding season. Within the Start-Stop classification, 50% of heifers reinitiated cyclicity with growth traits and reproductive parameters that were similar to heifers in the Early/Typical classification while those that remained non-cyclic were more similar to heifers in the Non-Cycling group. Thus, heifers with discontinued cyclicity or no cyclicity during puberty attainment had delayed reproductive maturity resulting in subfertility and potentially a shorter reproductive lifespan.


Sexual Interference Behaviors In Male Adult And Subadult Tibetan Macaques (Macaca Thibetana), Kui-Hai Pang, Amanda K. Rowe, Lori K. Sheeran, Dong-Po Xia, Lixing Sun, Jin-Hua Li Mar 2021

Sexual Interference Behaviors In Male Adult And Subadult Tibetan Macaques (Macaca Thibetana), Kui-Hai Pang, Amanda K. Rowe, Lori K. Sheeran, Dong-Po Xia, Lixing Sun, Jin-Hua Li

Anthropology and Museum Studies Faculty Scholarship

Male nonhuman primate sexual interference, which includes copulation interruption and copulation harassment, has been related to reproductive success, but its significance has been challenging to test. Copulation interruption results in the termination of a copulation before ejaculation, whereas copulation harassment does not. We conducted this study using the all-occurrence behavior sampling method on sexual interference behaviors of seven adult and four subadult male Tibetan macaques (Macaca thibetana) in mating and non-mating seasons at Mt. Huangshan, China, from August 2016 to May 2017. Our results showed that males’ individual proportion of copulation interruption and harassment was higher during the mating season …


Phenology Of Antler Casting And Occurrence Of Late-Breeding In Nebraska White-Tailed Deer, Brian C. Peterson, Patrick D. Farrell, Dave Fehlhafer, Miranda C. Reinson, Dustin H. Ranglack Mar 2021

Phenology Of Antler Casting And Occurrence Of Late-Breeding In Nebraska White-Tailed Deer, Brian C. Peterson, Patrick D. Farrell, Dave Fehlhafer, Miranda C. Reinson, Dustin H. Ranglack

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

White-tailed deer (Odocoileus virginianus) in Nebraska primarily breed in November (stimulated by photoperiod), but this season extends into December and January for unfertilized females and healthy fawns reaching the appropriate breeding weight by winter. Variation in the typical mating period can be attributed to geographic region, skewed sex ratios, and fawns reaching sexual maturity during their first year of birth. During April of 2019, we observed late season breeding by a male white-tailed deer in the central Platte River valley and documented late antler casting for this same late-copulating male. An additional male was observed in April of …


Breed Differences In Placental Development During Late Gestation Between Chinese Meishan And White Crossbred Gilts In Response To Intrauterine Crowding, Jeremy R. Miles, Jeffrey L. Vallet Mar 2021

Breed Differences In Placental Development During Late Gestation Between Chinese Meishan And White Crossbred Gilts In Response To Intrauterine Crowding, Jeremy R. Miles, Jeffrey L. Vallet

Roman L. Hruska U.S. Meat Animal Research Center: Reports

The objective of this study was to evaluate placental development during late gestation (day 100) between Chinese Meishan (CM; n = 7) and White crossbred (WC; n = 5) gilts following intrauterine crowding induced by unilaterally hysterectomy-ovariectomy. Gross placental morphology and areolae density as well as histological morphology (i.e., folded bilayer and placental stroma) were analyzed using computer-assisted morphometry for placentas of the smallest and largest fetuses within each litter. There was a breed by fetal size interaction (P < 0.01) for areolae density in which placentas for large CM fetuses had greater areolae density compared to small CM fetuses, but the density of areolae was greater for CM fetuses compared to WC fetuses, irrespective of fetal size. The width of the folded bilayer was greater (P < 0.01) in placentas for WC gilts compared to CM gilts, irrespective of fetal size. Placentas for small fetuses had greater (P < 0.01) folded bilayer width compared to large fetuses, irrespective of breed. The placental stromal width was greater (P < 0.01) in placentas for large fetuses compared to small, irrespective of breed. The difference between stromal width in placentas between divergent-sized littermates, however, was greater (P = 0.05) in WC gilts compared to CM gilts, indicating there was a limited response to intrauterine crowding in CM gilts. These results indicate there is an altered placental development during late gestation in CM compared to WC gilts, thus, there are likely different mechanisms for responding to intrauterine crowding between breeds.


Resource Assessment Report Abrolhos Islands And Mid-West Trawl Managed Fishery Resource, Mervi Kangas, A Chandrapavan, Anne Wilkins, E. A. Fisher, S. Evans Mar 2021

Resource Assessment Report Abrolhos Islands And Mid-West Trawl Managed Fishery Resource, Mervi Kangas, A Chandrapavan, Anne Wilkins, E. A. Fisher, S. Evans

WA Marine Stewardship Council report series

This document provides a cumulative description and assessment of the Abrolhos Islands and Mid-West Trawl Managed Fishery (AIMWTMF) and all of the fishing activities (i.e. fisheries / fishing sectors) affecting this resource in Western Australia (WA). This resource comprises of a single species of scallop, Ylistrum balloti which occurs in inshore waters to around 40 m depth at the Abrolhos Islands. This species is captured exclusively by demersal otter trawl gear in the West Coast Bioregion.


A Reference Genome Assembly Of Simmental Cattle, Bos Taurus Taurus, Michael P. Heaton, Timothy P.L. Smith, Derek M. Bickhart, Brian L. Vander Ley, Larry A. Kuehn, Jonas Oppenheimer, Wade R. Shafer, Fred T. Schuetze, Brad Stroud, Jennifer C. Mcclure, Jennifer P. Barfield, Harvey D. Blackburn, Theodore S. Kalbfleisch, Kimberly M. Davenport, Kristen L. Kuhn, Richard E. Green, Beth Shapiro, Benjamin D. Rosen Mar 2021

A Reference Genome Assembly Of Simmental Cattle, Bos Taurus Taurus, Michael P. Heaton, Timothy P.L. Smith, Derek M. Bickhart, Brian L. Vander Ley, Larry A. Kuehn, Jonas Oppenheimer, Wade R. Shafer, Fred T. Schuetze, Brad Stroud, Jennifer C. Mcclure, Jennifer P. Barfield, Harvey D. Blackburn, Theodore S. Kalbfleisch, Kimberly M. Davenport, Kristen L. Kuhn, Richard E. Green, Beth Shapiro, Benjamin D. Rosen

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Genomics research has relied principally on the establishment and curation of a reference genome for the species. However, it is increasingly recognized that a single reference genome cannot fully describe the extent of genetic variation within many widely distributed species. Pangenome representations are based on high-quality genome assemblies of multiple individuals and intended to represent the broadest possible diversity within a species. A Bovine Pangenome Consortium (BPC) has recently been established to begin assembling genomes from more than 600 recognized breeds of cattle, together with other related species to provide information on ancestral alleles and haplotypes. Previously reported de novo …


A Reference Genome Assembly Of American Bison, Bison Bison Bison, Jonas Oppenheimer, Benjamin D. Rosen, Michael P. Heaton, Brian L. Vander Ley, Wade R. Shafer, Fred T. Schuetze, Brad Stroud, Larry A. Kuehn, Jennifer C. Mcclure, Jennifer P. Barfield, Harvey D. Blackburn, Theodore S. Kalbfleisch, Derek M. Bickhart, Kimberly M. Davenport, Kristen L. Kuhn, Richard E. Green, Beth Shapiro, Timothy P.L. Smith Mar 2021

A Reference Genome Assembly Of American Bison, Bison Bison Bison, Jonas Oppenheimer, Benjamin D. Rosen, Michael P. Heaton, Brian L. Vander Ley, Wade R. Shafer, Fred T. Schuetze, Brad Stroud, Larry A. Kuehn, Jennifer C. Mcclure, Jennifer P. Barfield, Harvey D. Blackburn, Theodore S. Kalbfleisch, Derek M. Bickhart, Kimberly M. Davenport, Kristen L. Kuhn, Richard E. Green, Beth Shapiro, Timothy P.L. Smith

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Bison are an icon of the American West and an ecologically, commercially, and culturally important species. Despite numbering in the hundreds of thousands today, conservation concerns remain for the species, including the impact on genetic diversity of a severe bottleneck around the turn of the 20th century and genetic introgression from domestic cattle. Genetic diversity and admixture are best evaluated at genome-wide scale, for which a high-quality reference is necessary. Here, we use trio binning of long reads from a bison-Simmental cattle (Bos taurus taurus) male F1 hybrid to sequence and assemble the genome of the American plains bison (Bison …


Ecological Studies Of Wolves On Isle Royale Annual Report 2020-2021, John A. Vucetich, Rolf O. Peterson, Sarah R. Hoy Mar 2021

Ecological Studies Of Wolves On Isle Royale Annual Report 2020-2021, John A. Vucetich, Rolf O. Peterson, Sarah R. Hoy

Ecological Studies of Wolves on Isle Royale

Annual Report 2020-2021


Sars-Cov-2 Exposure In Escaped Mink, Utah, Usa, Susan A. Shriner, Jeremy W. Ellis, J. Jeffrey Root, Annette Roug, Scott R. Stopak, Gerald W. Wiscomb, Jared R. Zierenberg, Hon S. Ip, Mia Kim Torchetti, Thomas J. Deliberto Mar 2021

Sars-Cov-2 Exposure In Escaped Mink, Utah, Usa, Susan A. Shriner, Jeremy W. Ellis, J. Jeffrey Root, Annette Roug, Scott R. Stopak, Gerald W. Wiscomb, Jared R. Zierenberg, Hon S. Ip, Mia Kim Torchetti, Thomas J. Deliberto

United States Department of Agriculture Wildlife Services: Staff Publications

In August 2020, outbreaks of coronavirus disease were confirmed on mink farms in Utah, USA. We surveyed mammals captured on and around farms for evidence of infection or exposure. Free-ranging mink, presumed domestic escapees, exhibited high antibody titers, suggesting a potential severe acute respiratory syndrome coronavirus 2 transmission pathway to native wildlife.

We report a wildlife epidemiologic investigation of mammals captured on or near properties in Utah, USA, where outbreaks of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection occurred in farmed mink. Mink farms are relatively common in the United States, and most are small family farms. The US …


Winter Field Report, December 2020-February 2021, W. Ross Silcock Mar 2021

Winter Field Report, December 2020-February 2021, W. Ross Silcock

Nebraska Bird Review

Thanks to the increasing numbers of observers taking time to report to eBird, social media, and NEBIRDS, this season, as is true of recent seasons, turned up some fascinating trends. The 96 cited observers, as well as several not cited, all contributed to the firmness of the database that allows better-supported conclusions to be drawn than from our past reliance all too often on anecdotal supposition.

Overwhelmingly clear this winter was the large number of taxonomically diverse species found north and west of expected winter ranges, and a surprising number of passerines reported for the first time in mid-winter. It …


2021 Annual Color Photo Section Mar 2021

2021 Annual Color Photo Section

Nebraska Bird Review

Our photo theme this year is species with the word “red” in their common names. For this "Red Challenge", "red" must be used to mean the color red, but the birds don't actually have to display any red to qualify. Examples appear on the next five pages of photos.

Redheaded Woodpecker in Knox Co., 28 July 2020. Photo by Mark Brogie.

Rednaped Sapsucker male at Plum Creek Valley WMA, Brown Co., 16 Sept. 2018. Photo by Mary Clausen.

Redbellied Woodpecker female, photographer's yard, Wahoo, Saunders Co., 14 Feb. 2021. Photo by Joe Freeborn.

Northern Flicker male, western "redshafted" subspecies, Seward …


The Nebraska Bird Review, Volume 89 March 2021 Number 1 Mar 2021

The Nebraska Bird Review, Volume 89 March 2021 Number 1

Nebraska Bird Review

Winter Field Report, Dec. 2020 - Feb. 2021, by W. Ross Silcock …2-17

2020-2021 Christmas Bird Counts …18, 29-40

Annual Color Photo Section …21-28

Apparent Townsend’s x Black-throated Green Warbler (Setophaga townsendi x virens) hybrids in Kansas and Nebraska, by Jon C. King, Terry Swope, Kevin Groeneweg, Pete Janzen, & Mark A. Brogie … 41

Annual Treasurer's Report for 2020, by Jan Johnson …46.

Subscription and Organization Information …47


2020-2021 Christmas Bird Counts, Don Paseka Mar 2021

2020-2021 Christmas Bird Counts, Don Paseka

Nebraska Bird Review

Fourteen counts were run during the 2020-2021 CBC season, ten of which were run in the period December 14 through December 22. The other four were done December 28 or later. The weather was generally cooperative with little snow cover and some open water. While there were no weather issues that resulted in cancellation or postponement, four counts, Crawford, Harrison, Harlan County, and Omaha, were cancelled over concerns for the Covid situation. It would be expected that running fewer counts would have a noticeable negative impact on this year’s species count and overall numbers. The Harrison and Crawford counts usually …


Apparent Townsend’S X Black-Throated Green Warbler (Setophaga Townsendi X Virens) Hybrids In Kansas And Nebraska, Jon C. King, Terry Swope, Kevin Groeneweg, Pete Janzen, Mark A. Brogie Mar 2021

Apparent Townsend’S X Black-Throated Green Warbler (Setophaga Townsendi X Virens) Hybrids In Kansas And Nebraska, Jon C. King, Terry Swope, Kevin Groeneweg, Pete Janzen, Mark A. Brogie

Nebraska Bird Review

The Townsend’s Warbler (Setophaga townsendi), Hermit Warbler (Setophaga occidentalis), Golden-cheeked Warbler (Setophaga chrysoparia), and Black-throated Green Warbler (Setophaga virens) are similar in appearance and vocalizations. Evaluation of mtDNA suggests that these four species diverged about 1 million years ago during the mid-Pleistocene (Lovette et al. 2010), at which time glaciation separated ancestral forms thus allowing for speciation (Morse and Poole 2020). Under the environmental conditions prevalent today, however, the breeding distribution of Townsend’s Warbler now overlaps to a limited extent with those of the Hermit and Black-throated Green Warblers, and hybridization occurs …