Digital Commons Network^™

Blue Shark (Prionace Glauca) Jaw, Nicholas D. Burchett, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Habitat And Conditions Of Poisoning Of Toxic Plants In North America, Michael H. Ralphs

Poisonous Plant Research (PPR)

This paper presents a list of important poisonous plants in North America that are toxic to both livestock and humans. The aim of this paper is to present information to help reduce the risk of poisoning. The paper emphasizes the particular plant communities in which these plants grow. Some of these plants are endemic, growing on specific soils or specific ecological sites. Others are distributed more broadly throughout a vegetation type. A few of the plants are widespread, ranging over several broad ecosystems. In diagnosing poisoning, it is important to know what plants are expected to grow in the communities …

Improvements To Fisheries Compensation Processes And Valuation Methodologies In Western Australia, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Published Reports

This report has been prepared by the Compensation Working Group (WG) to provide advice to the Minister for Fisheries on improving Western Australia’s (WA) fisheries compensation processes under two key legislative frameworks:

• Fisheries adjustment schemes, under the Fisheries Adjustment Scheme Act 1987
• (FAS Act), and 
• Statutory compensation under Fishing and Related Industries Compensation (Marine Reserves) Act 1997 (FRICMA).

This work has been undertaken as a precursor to the larger scale adjustment and compensation processes that will be required as part of the implementation of several marine parks throughout the Kimberley and South Coast of WA.

Fisheries Occasional Publication No. 150 - Response To 2024 External Review Of Integrated Stock Assessments For Key Wa Demersal Indicator Stocks, Rubie Evans-Powell, S. A. Hesp, Ainslie Denham, Emily A. Fisher, Rachel Marks, Fabian I. Trinnie, Brett Crisafulli

Fisheries Occasional Publications

In Western Australia (WA), stock assessments for key demersal species, including snapper and red emperor, have traditionally used bespoke integrated models developed in-house by the Department of Primary Industries and Regional Development (DPIRD). In line with other Australian jurisdictions, DPIRD is transitioning to Stock Synthesis (SS) as its primary platform for integrated stock assessments of WA finfish. To support this transition, DPIRD commissioned an independent expert review of recent integrated models applied to three demersal stocks. This publication responds to recommendations from Professor André Punt (University of Washington and CSIRO) in his 2024 review, which examined assessments for Pilbara red …

Beta-Casomorphin7 Detection In Milk From Dairy Species And Beta-Casein Protein Characterization In Cattle From Selected Provinces In The Philippines, Angelo M. Tapia, Maria Cynthia R. Oliveros, Queennie Hope D. Umipon, Hazel Marie E. Nicolas, Naoya Ogawa, Yasuyuki Kitaura

The Philippine Agricultural Scientist

This study was conducted to detect β-casomorphin7 (BCM7) in dairy animals and to characterize the β-casein (CSN2) genotype among dairy cattle breeds in the Philippines. A total of 59 dairy animals, composed of 35 cattle (12 Holstein Sahiwal [HS16 Jersey × Holstein Friesian [JHF], and 7 Siquijor Native Cattle [SNC]), 15 buffaloes (Bulgarian Murrah and Brazilian Murrah), and 9 goats (Saanen and Anglo-Nubian) were collected with milk samples. Milk protein was extracted and subjected to high-performance liquid chromatography–tandem mass spectrometry (HPLC–MS/MS) analysis after stimulated gastrointestinal digestion. BCM7 was detected in cattle with an average concentration of 0.322 + 0.080, whereas …

Beta-Casomorphin7 Detection In Milk From Dairy Species And Beta-Casein Protein Characterization In Cattle From Selected Provinces In The Philippines, Angelo M. Tapia, Cynthia R. Oliveros Maria, Queennie Hope D. Umipon, Hazel Marie E. Nicolas, Naoya Ogawa, Yasuyuki Kitaura

The Philippine Agricultural Scientist

This study was conducted to detect β-casomorphin7 (BCM7) in dairy animals and to characterize the β-casein (CSN2) genotype among dairy cattle breeds in the Philippines. A total of 59 dairy animals, composed of 35 cattle (12 Holstein Sahiwal [HS16 Jersey × Holstein Friesian [JHF], and 7 Siquijor Native Cattle [SNC]), 15 buffaloes (Bulgarian Murrah and Brazilian Murrah), and 9 goats (Saanen and Anglo-Nubian) were collected with milk samples. Milk protein was extracted and subjected to high-performance liquid chromatography–tandem mass spectrometry (HPLC–MS/MS) analysis after stimulated gastrointestinal digestion. BCM7 was detected in cattle with an average concentration of 0.322 + 0.080, whereas …

Trophic Structure And Mercury Bioaccumulation In Walleye And Yellow Perch In The Upper And Lower Red Lake Basins, Marissa Pribyl

Biology Graduate Theses

Mercury is a persistent global contaminant that biomagnifies through aquatic food webs, with dietary and environmental factors serving as the primary drivers of accumulation in fishes. Trophic structure and methylmercury dynamics in Walleye (ogaa; Sander vitreus) and Yellow Perch (asaawens; Perca flavescens) were investigated in the Upper and Lower Red Lake basins in Red Lake, Minnesota, during 2024-2025. Diets of Walleye and Yellow Perch were assessed through stomach dissections, and tissue samples from both species were analyzed for total mercury concentrations. Additional analyses included shiners (gigoozens; Notropis spp., Hudsonius spp.) along with a variety of freshwater fish and …

Evaluation Of The Posterior Segment Of The Dromedary Camel’S Eye Using Spectral-Domain Optical Coherence Tomography (Sd-Oct), Amine Berghiche, Djallal Eddine Rahmoun, Nassiba Reghaissia, Allaoua Chaouki Bentazir, Mohamed Kamal Merai Abdel Maksoud

The Thai Journal of Veterinary Medicine

The dromedary camel possesses unique ocular adaptations enabling survival in harsh desert environments. This study aimed to characterize the posterior segment of the dromedary camel’s eye using spectral-domain optical coherence tomography (SD-OCT) and fundus photography. Fourteen healthy adult camels were sedated and imaged. High-resolution OCT images enabled clear visualization and measurement of the retina, choroid, and sclera. The retina exhibited well-defined layers, including the retinal pigment epithelium, photoreceptor layer, plexiform layers, and nerve fiber layer. Mean thicknesses of the retina, choroid, and sclera were 267 ± 2.54 μm, 299 ± 3.15 μm, and 155 ± 2.74 μm in the right …

Atlantic Sharpnose (Rhizoprionodon Terraenovae) Chondocranium, Morgan Indyk, Sarah Hendricks, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

A Revision Of The Psammophilic Genus Liobuthus Birula, 1898 (Scorpiones: Buthidae), With A Description Of Four New Species From Central Asia, Victor Fet, František Kovařík, Graeme Lowe, Matthew R. Graham

Euscorpius

The rare Central Asian psammophilic scorpion genus, Liobuthus Birula, 1898 (Scorpiones: Buthidae), is revised. Five species are delineated according to results from three species delimitation approaches using mitochondrial DNA. Results are supported by diagnostic morphology, including an assessment of the distinctive neobothriotaxy. The type species, L. kessleri Birula, 1898, is confirmed for Iran (northeast), Turkmenistan and Uzbekistan (south). Four new species are described: L. atamuradovi sp. n. (Turkmenistan),  L. danovi sp. n. (Kazakhstan, northern Turkmenistan, Uzbekistan), L. shukurovi sp. n. (southwestern Tajikistan), and L. vachoni sp. n. (southern Kazakhstan), The unique additive neobothriotaxy (on both pedipalp femur and patella) …

Exploring Molecular And Morphological Diversity Of Ostracoda: A Combined Approach Based On Coi Sequences And Morphological Characters, Serdar Di̇nç, Serap Mutun, Okan Külköylüoğlu

Turkish Journal of Zoology

Ostracods are diminutive aquatic invertebrates with a broad geographical distribution  across a diverse range of aquatic habitats, including lentic and lotic freshwater  environments as well as marine waters. Due to their sensitivity to environmental  changes, ostracods are valuable tools in biodiversity monitoring, providing a link to  past, present, and future ecological conditions. Despite the significance of classical  taxonomic studies in species identification, molecular approaches remain  underutilized in ostracod research, representing an area of potential growth for  advancing our understanding of this diverse group. Thus, molecular studies in  ostracods have the potential to greatly enhance our understanding of morphology,  ecological variation …

Spatial And Temporal Variability Of Mayfly Communities (Insecta: Ephemeroptera) In Mountainous And Semimountainous Rivers Of The Western Aegean Basin, Biljana Rimcheska, Yanka Vidinova

Turkish Journal of Zoology

Mayflies are among the most abundant benthic invertebrates inhabiting natural lotic  freshwater systems. Their assemblages vary with environmental, geographical, and  hydrological conditions along altitudinal gradients and under different types of  watershed disturbance. The main objective of this study was to analyze the  composition and β-diversity of mayflies across three river watersheds and to assess  how these assemblages differ among them. We collected biological and  environmental data from 38 sampling sites distributed across the three river  watersheds. We hypothesized that mayfly assemblages would vary with  environmental gradients on both spatial and temporal scales; specifically, we  expected pristine streams to exhibit higher …

Towards The Assessment Of E-Flows: A Fish-Based Approach For The Tiber River Basin (Central Italy), Antonella Carosi, Francesca Lorenzoni, Fatemeh Zarei, Rachele Brustenga, Lucio Di Matteo, Daniela Valigi, Corrado Cencetti, Carlo Cardellini, Stefano Casadei, David Cappelletti, Massimo Lorenzoni

Turkish Journal of Zoology

Estimating ecological flows (EFs) in rivers is crucial for meeting the Water Framework  Directive (WFD) 2000/60/EC goals. To develop an EF model, it is  essential to use biological indicators to reliably record the impacts of human-induced  alterations on aquatic ecosystems. The adaptability of fish to annual flow variability  makes them a significant biological quality element (BQE). Consequently, using fish  as bioindicators is a powerful tool for assessing the impact of changes in the  hydrological regime on the natural communities within a river system. The new index  of the ecological status of fish communities (NISECI) is a methodology developed in  Italy …

Chlorella Vulgaris Measurements Using Full-Spectrum Goniometer For Optically Complex Inland Water Monitoring, Pinar Gürbüzer, Uğur Murat Leloğlu

Turkish Journal of Zoology

Rising environmental stressors, including climate change, nutrient loading, pollution,  and anthropogenic impacts, have made the continuous monitoring of lake water  quality increasingly essential. While in situ methods offer high precision, satellite-based remote sensing is essential for capturing large-scale, long-term changes and  accessing remote or extreme environments. To complement these approaches, we  developed a cost-effective in situ optical measurement system specifically designed  for optically complex inland waters. T he instrument enables detailed optical  characterization across scattering angles from 0° to 160° and wavelengths between  423 and 728 nm, covering both visible and near-infrared regions. Initial validation was  performed using monocultures of …

Determination Of Cortisol Concentrations Using Different Biomarkers In Dairy Goats During Pregnancy, Fatma Mi̇ra Güven, Erkan Pehli̇van

Turkish Journal of Veterinary & Animal Sciences

Pregnancy is considered one of the most physiologically stressful periods in mammals. In the present study, serum and hair cortisol concentrations were measured in nine female Akkeçi goats, including five primiparous (1.5 years old) and four multiparous (3.5 years old), to evaluate chronic stress during pregnancy. Hair samples were collected in October, November, and December following the introduction of bucks to the herd and within the first 12 h postpartum (corresponding to the 1st, 2nd, 3rd, and 7th sampling times). Hair samples were not collected in January, February, or March (the 4th, 5th, and 6th sampling times) due to insufficient …

Effects Of Zinc-Reinforced Clinoptilolite On Hematological Parameters, Igg Levels, And Enzyme Histochemistry In Fattening Lambs, İhsan Kisadere, Muhi̇tti̇n Zengi̇n, Özkan Demi̇rbaş, Mehmet Faruk Aydin

Turkish Journal of Veterinary & Animal Sciences

The study aimed to determine the effects of zinc-reinforced clinoptilolite supplementation to the diet on selected hematological parameters, serum immunoglobulin G (IgG) concentrations, and enzyme histochemical characteristics in fattening lambs. For this purpose, 40 healthy male lambs were randomly allocated into five equal groups: control (C; n = 8), natural clinoptilolite (NC; n = 8), zinc (ZN; n = 8), natural clinoptilolite plus zinc (NCZN; n = 8), and zinc-reinforced clinoptilolite (ZNRC; n = 8). All animals were housed in individual pens, and the supplementation period continued for 42 days. Blood samples were collected before the trial (day 0) and …

Comparison Of The Mars And Xgboost Algorithms For Predicting Body Weight In Kalahari Red Goats, Louis Thobela Tyasi, Cem Tirink, Kwena Mokoena, Hasan Önder, Uğur Şen, Demet Çanga Boğa, Tolga Tolun, İsmai̇l Gök, Yüksel Aksoy, Lütfi̇ Bayyurt, Ömer Faruk Yilmaz

Turkish Journal of Veterinary & Animal Sciences

Estimating goat body weight from morphometric traits is essential for growth monitoring, health management, and welfare. Accurate weight informs nutrition, clinical interventions, and mating decisions. In this study, the MARS and XGBoost algorithms were used to estimate the live weight of Kalahari Red goats based on body measurements. A dataset containing body length (BL), birth type (single, twin, or triplet), withers height (WH), rump height (RH), and heart girth (HG) information for 200 goats was used in the training and testing of the models. The performances of the models were evaluated with the goodness-of-fit criteria. XGBoost showed a performance of …

Hatchability And Nestling Viability In An Extremely Short-Beaked Pigeon Breed, Türker Savaş, Hakan Erdem, Cemi̇l Tölü

Turkish Journal of Veterinary & Animal Sciences

The selection of hobby animals for breeding by enthusiasts is often based on aesthetic considerations, which can have a negative impact on the animals’ biology. Furthermore, “extreme traits” that deviate from ancestral norms, such as short beaks in pigeons, can be detrimental to the animal’s welfare. Beaks perform many essential functions, such as facilitating feed intake and eggshell breaking. The present study investigates possible hatching problems and the nestling viability of short-beak pigeons through a study of the breeding records of Mısıri (short beak), Baska (medium beak), and Turkish Dönek (normal beak) pigeons, as well as data from one breeding …

A Case Study Of Suspected Sheep Losses Due To Chokecherry Not Death Camas, Kevin D. Welch, Clint A. Stonecipher, Stephen T. Lee, Daniel Cook, Benedict T. Green

Poisonous Plant Research (PPR)

Death camas (Zigadenus paniculatus) is a toxic plant often associated with poisoning cases in livestock, especially in sheep, in the spring on mountain foothills. Consequently, when sheep are found dead in mountain foothills, and death camas is present, it is often implicated as the potential cause of death. However, this may be over simplistic as there may be other plants that may also contribute to, or are the cause of, death in sheep. In this study, we present a case of approximately 200 sheep out of a band of 400 that died within 24 hours of beginning to …

Metagenomic Insights Into Antimicrobial Resistance In Small-Scale Poultry And Cattle Farms, Elijah Ayilaran, Agnes Kilonzo-Nthenge Agnes Kilonzo-Nthenge

Food and Animal Sciences Faculty Research

Antimicrobial resistance (AMR) poses a critical challenge to global health, with food animal production systems recognized as significant reservoirs of antimicrobial-resistant bacteria. This study evaluated the prevalence and distribution of antimicrobial resistance genes (ARGs) and virulence factors (VFs) across small-scale poultry and cattle farms. A total of 468 samples (soil, feces, water, and natural land soil) were collected from four farms and analyzed using shotgun metagenomics. Proteobacteria (34.91%) were the dominant phylum across environments, followed by Cyanobacteria (15.67%), Actinobacteria (14.95%), Firmicutes (10.57%), and Bacteroidetes (8.69%). Tetracycline (33.41%) and beta-lactam (30.30%) resistance genes were the most abundant, with macrolide (9.32%) and …

Linking Local Ecological Knowledge And Management Perspectives On Oyster Predation In Mississippi And Alabama, Cynthia Lupton, Eric Sparks, Mark Woodrey, James M. Drymon, Nigel Temple, Steven Scyphers

Research Data

Eastern oysters (Crassostrea virginica) provide critical ecosystem services, yet populations along the northern Gulf Coast are declining due to environmental stressors, such as water quality issues and predation. To evaluate how threats to oysters are perceived across stakeholder groups, we surveyed oyster Farmers and Resource professionals in Mississippi and Alabama about predator impacts, seasonal patterns, and mitigation strategies. Survey responses (n = 21) were analyzed using descriptive statistics, Fisher’s Exact tests, Mann–Whitney U tests, and t-tests. Farmers and Resource professionals identified multiple predators as important sources of mortality, but their relative rankings differed across groups. Resource professionals consistently viewed southern …

Bull Shark (Carcharhinus Leucas) Jaw, Roman Devlin, Jade A. Mells, Rileigh Gonzalez, Nicholas D. Burchett, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Mitigating Salmonella In Poultry Using Probiotics: Mechanisms, Challenges, And Opportunities, Oluwaseun D. Adeyemi, Samuel N. Nahashon

Food and Animal Sciences Faculty Research

The global poultry industry continues to face significant challenges due to Salmonella infections, which pose severe public health concerns and economic losses. Recently, the reemergence of antimicrobial resistance has led to the restriction of antibiotic use in poultry, especially as growth promoters, thus accelerating the search for sustainable alternatives. Among these, probiotics have gained attention as potential candidates for improving poultry health and mitigating Salmonella colonization in the gut. This review summarizes the key mechanisms through which probiotics exert anti-Salmonella effects, including competitive exclusion, production of antimicrobial substances, reinforcement of the intestinal barrier, and modulation of host immune responses. Commonly …

Fisheries Management Paper No. 311: West Coast Deep Sea Crustacean Resource Harvest Strategy, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Management Papers

Harvest strategies for Western Australia’s (WA) aquatic resources are formal documents developed by the Department of Primary Industries and Regional Development (DPIRD, the Department) to support decision-making processes that ensure the outcomes are consistent with the principles of Ecologically Sustainable Development (ESD; Fletcher 2002a) and Ecosystem Based Fisheries Management (EBFM; Fletcher et al. 2012). Harvest strategies are a key component of all contemporary fishery management systems and a requirement for certification under the Marine Stewardship Council (MSC). The objectives of ESD are reflected in the objectives of the Fish Resources Management Act 1994 (FRMA).

This West Coast Deep Sea Crustacean …

Animal Taxa Threatened By Adverse Fire Regimes In Western Australia: A Synthesis And Outlook, Tim S. Doherty, Mark G. Allen, Karlene Bain, Stephen J. Beatty, Allan H. Burbidge, Renee A. Catullo, Sarah Comer, Ben Corey, Saul J. Cowen, Robert A. Davis, Martin A. Dziminski, J. Anthony Friend, Bruce Greatwich, Mark S. Harvey, Hannah Killian, Michael W. Klunzinger, Damian C. Lettoof, Nicola J. Mitchell, Melinda Moir, Harry A. Moore, David L. Morgan, Ian J. Radford, Michael G. Rix, Tom Vigilante, Adrian F. Wayne, Corey Whisson

Research outputs 2022 to 2026

Adverse fire regimes threaten biodiversity, potentially leading to population declines and increased extinction risk. Understanding how varying fire regimes affect threatened species is essential for effective ecosystem management, including in Western Australia where diverse ecosystems are exposed to wildfires, Indigenous burning, and prescribed fire. We compiled and synthesised data on the threat of adverse fire regimes to threatened animal taxa in Western Australia. Using a threat classification scheme, we ranked adverse fire regimes as having either no, low, medium, high, or unknown impact on each taxon. A total of 212 taxa were reviewed, 153 (72%) of which are considered fire-threatened: …

Vultures, Bryan M. Kluever, Lee A. Humberg, Scott C. Barras

Wildlife Damage Management Technical Series

Fact sheet about vultures including information about human--wildlife conflicts, the vulture roost, affects on livestock, structures, human health and safety, identification of damage, management methods, legal considerations, and economics. Also included is an overview of the species.

Anthelmintic Efficacy Of Rosemary Oil And Its Nanoemulsion Against The Monogenean Parasite, Zeuxapta Seriolae, In Yellowtail Kingfish (Seriola Lalandi), Md Reaz Chaklader, Lindsey Woolley, Hosna Gholipour-Kanani, Masashi Maita, Gavin Partridge

Fisheries Research Articles

This study evaluated the anthelmintic efficacy of rosemary oil delivered as a nanoemulsion compared with regular rosemary oil against the monogenean parasite Zeuxapta seriolae in yellowtail kingfish (YTK; Seriola lalandi). A 20-day feeding trial tested three dietary treatments: two levels of regular rosemary oil (providing 0.85 and 1.7 g cineole·kg−1 feed) and a rosemary-oil nanoemulsion (providing 0.85 g cineole·kg−1 feed), against a control diet without rosemary oil. Juvenile fish (293 ± 5 g) were pre-exposed to Z. seriolae oncomiracidia before the trial, resulting in an initial mean parasite abundance of 97 ± 4 per fish. At trial completion, plasma …

A Bovine Cell Line Resistant To Japanese Encephalitis Virus Entry But Permissive To Post-Entry Replication, Sang-Im Yun, Young-Min Lee

Animal, Dairy, and Veterinary Science Faculty Publications

Japanese encephalitis virus (JEV) is a mosquito-borne zoonotic orthoflavivirus that poses a significant global health threat. It causes severe neuroinflammatory disease in humans and reproductive failure in swine. Because of the broad host range and cell tropism of JEV, identifying animal cell lines resistant to infection has been a persistent challenge. In this study, we demonstrate that Madin–Darby bovine kidney (MDBK) cells are resistant to JEV infection yet remain fully permissive to viral replication when transfected with viral genomic RNA. Using immunoblotting, immunofluorescence, and flow cytometry, we show that MDBK cells, unlike the highly susceptible baby hamster kidney (BHK-21) cells …

Zonation-Dependent Distribution Of Microplastic Occurrence In Patella Caerulea From Mersin Coast, Türkiye, Ezgi̇ Deği̇rmenci̇, Nuray Çi̇ftçi̇, Sedat Gündoğdu, Deni̇z Ayas

Turkish Journal of Zoology

Increasing plastic pollution has become a critical environmental issue, leading to  challenges in management. Specifically, microplastics (MPs) are of particular concern  because they can persist in aquatic ecosystems and adversely affect marine  organisms. The objective of this study was to assess the occurrence of MPs  in the soft tissues of Patella caerulea (Linnaeus, 1758) collected from the Mersin  Viranşehir coastal area. As no specimens were found in the supralittoral zone, the  decision was taken to conduct sampling only in the mediolittoral and infralittoral  zones. The total sampling area was 24 m2 divided into three 4-m2 plots in each zone.  A …

Blinking Without Eyelids: First Video-Documented Evidence Of A Blink-Like Reflex In Ophisops Elegans (Reptilia: Lacertidae), Turan Meri̇ç Çelebi̇, Yusuf Çeli̇kaği, Tuana Kinay, Arda Cem Kuyucu, Muammer Kurnaz, Mehmet Kürşat Şahi̇n

Turkish Journal of Zoology

Eyelids play a crucial role in protecting the eyes of vertebrates; however, certain  reptile species, such as Ophisops elegans, completely lack movable eyelids. In this  study, we present the first video-documented evidence of a blink-like reflex in O.  elegans, captured through endoscopic field observations and corroborated by laboratory video analysis. The observed movement consisted of a brief convex  deformation of the ocular surface, lasting approximately 0.3 s and resembling a blink  despite the presence of a fixed transparent brille. This behavior was observed once in  the field and twice under controlled laboratory conditions. We propose that O.  elegans may employ …