Digital Commons Network^™

Vertebrate Diversity In The La Amistad International Park Buffer Zone, Guadalupe, Chiriqui, Panamá, Mina Olson

Independent Study Project (ISP) Collection

Forest fragmentation and increasing agricultural land use are posing threats to the diversity of vertebrates in Panama and across the Mesoamerican Biological Corridor. Protected areas are crucial for providing connectivity and maintaining vertebrate populations. For endemic species with small native ranges, these protected areas are critical for their survival due to sensitivity of habitat change. Higher species diversity and occupancy has been reported for both birds and mammals in protected and forested areas. This pilot survey of vertebrate species was conducted to determine which species live in a primary forest within the buffer zone of La Amistad International Park near …

Documenting The Southern Range Terminus Of The Wood Frog (Lithobates Sylvaticus) In North America, Christian Braswell

Theses

The Wood Frog (Lithobates sylvaticus) holds a remarkable position in North American amphibian biology, with its range extending from the Arctic Circle down to the near sub-tropical southeastern United States. This thesis presents a novel quantitative polymerase chain reaction analysis (qPCR) primer specific to L. sylvaticus and a survey effort regarding the southernmost distribution and detection of this species in Alabama through the application of environmental DNA (eDNA) sampling techniques. By investigating historical data and employing advanced genetic methodologies, this research provides insights into the contemporary status and distribution of the Wood Frog. This research is important to …

Improving Fertility While Synchronizing Estrus In Beef Heifers When Feeding Mga, Anisa Olavarria

Honors Theses

Melengestrol Acetate (MGA) is used to suppress estrus in cattle and is used to synchronize estrus. However, when fed to beef cattle during the absence of a corpus luteum, a transient progesterone producing organ after ovulation, the dominant follicle is unable to regress becoming persistent resulting in decreased fertility of the oocyte. In this study, two treatment protocols were designed to test if administering GnRH, a hormone used to induce ovulation resulting in the formation of a corpus luteum at the beginning of the MGA feeding will prevent fewer persistent follicles and improve the fertility of the ovulation immediately following …

Life Line Spring 2024, Otterbein Biology And Earth Science Department

Life Line - The Biology Department Newsletter

In this Issue:

The Department Welcomes Dr. Grooms; Otterbein's New Pollinator/Rain Garden; Alumni Return to Share Research; Svitana Serves on Ohio EPA VAP Rules Review Advisory Committee; Field Geology Students Explore Death Valley and the Grand Canyon; Students Volunteer at Remote Area Medical Clinic; The Mussels of the Stillwater River and Greenville Creek; More Than "Just" a Chickadee; An Enriching Time at the Zoo; Human Reaction Times; Using Computer Models to Inform Real World Control Methods in Street Dogs; Svitana Continues Work with NGWA; DIY Microbial Fuel Cell Challenge; Birds of a Feather...; Students Research Impact of Sunscreens on Corals; …

Growing South Dakota (Spring 2024), College Of Agriculture, Food And Environmental Sciences

Growing South Dakota (Publication of the College of Agriculture, Food and Environmental Sciences)

[Page] 3 Empowering the Next Generation of Agriculture
[Page] 5 Celebration of Faculty Excellence
[Page] 7 Judging Teams Provide Connection, Critical Skills
[Page] 11 Melanie Caffe: SDSU Oat Breeder Finds Motivation in Making a Difference for Farmers
[Page] 13 2024 CAFES Outstanding Seniors
[Page] 14 SDSU Celebrates Students Accepted to Veterinary Schools through Stethoscope Ceremony"
[Page] 15 New Researchers in CAFES
[Page] 17 Hitting the Mark – Shooting Sports Driving Growth in SDSU Extension 4-H Program
[Page] 19 A New Century Leads to a New Barn
[Page] 20 CAFES News & Updates
[Page] 21 Jackrabbits Now & Then
[Page] 22 …

The Effects Of Phenological Shifts On The Reproductive Success Of Common Terns (Sterna Hirundo) And Arctic Terns (Sterna Paradisaea) In The Gulf Of Maine, Jamie W. Dinella

Student Publications

Climate change is resulting in ecosystem-wide consequences, including shifts in the geographical distribution of species and the timing of biological events, or phenology. The rapidly warming Gulf of Maine hosts breeding populations of migratory common terns (Sterna hirundo) and Arctic terns (Sterna paradisaea). I used nest check data (2013-2022) and eggshell membrane stable isotope data (2022) from Petit Manan Island in the Gulf of Maine to examine the causes and consequences of variation in phenology in common and Arctic terns. I hypothesized that the timing of an individual’s breeding was impacted by their foraging behavior and that female terns that …

Ecological Studies Of Wolves On Isle Royale, Sarah Hoy, Rolf O. Peterson, John Vucetich

Ecological Studies of Wolves on Isle Royale

Annual Report 2023-2024

Hilling As A Management Tactic And Tool For Understanding Soybean Gall Midge (Resseliella Maxima Gagné), Pragya Gupta

Department of Entomology: Dissertations, Theses, and Student Research

Soybean gall midge (Resseliella maxima Gagné, SGM) emerged as a new species in the United States Midwest in 2019, causing injury to soybean (Glycine max L.) Infestation of R. maxima starts with females laying eggs in the fissures or cracks that develop at the base of soybean during the V2-V3 growth stage. The emerged larvae feed on the stem internally, leading to wilting and death of the plants. With knowledge gaps in biology and behavior, management strategies for this pest are challenging. Hilling is a cultural practice causing soil to cover the base of stems and is …

Demographic Consequences Of Off-River Nesting For Piping Plover (Charadrius Melodus) And Interior Least Tern (Sternula Antillarum Athalassos) In The Lower Platte River System, Nebraska, Elsa M. Forsberg

School of Natural Resources: Dissertations, Theses, and Student Research

Piping plovers (Charadrius melodus; hereafter, plovers) and interior least terns (Sternula antillarum athalassos; hereafter, terns) are two avian species that nest along the Lower Platte River system (LPRS) in Nebraska. In the LPRS, river sandbars provide natural nesting habitat, but off-river sites provide substantial nesting habitat especially when sandbar habitat is scarce. Although presumed to be important for the persistence of plovers and terns, off-river habitat is not self-sustaining and predicted to decline. Understanding the vital rates of plovers and terns in the LPRS will inform the role of off- river sites in the future conservation …

Influences Of Sex, Morph, And Weather On Roosting Distributions In Overwintering White-Throated Sparrows (_Zonotrichia Albicollis_), Rebecca Stephens

Honors Theses

Habitat choice influences survival by affecting access to resources, shelter from predators, mating opportunities, and numerous other costs and benefits. As such, habitat conservation is crucial, especially for migratory songbirds which are declining primarily due to habitat destruction. White-throated Sparrows (Zonotrichia albicollis) are a well-studied migratory songbird, but little is known about their roosting behaviors or how those behaviors are affected by sex, color morph, or weather. To determine this, we tracked White-throated Sparrows to their roosts, determined core home ranges, and analyzed the average distances of roost sites to the home range centroids according to these factors. …

A Deeper Dive Into Literature Published About Pinnipeds And Cetaceans Using The Five Domain Model, Aqsa Khan, Pedro Beltran

Posters - 2024

Research was conducted on cetaceans (whales and dolphins) (Figure 1) and pinnipeds (seals and sea lions) (Figure 2), focusing on five domains: nutrition, environment, health, behavior, and mental state. The goal was to identify the most discussed domain in existing literature. Specifically examining researchers' opinions on assessing the well-being of these marine mammals. After analyzing articles, hypotheses were formed suggesting that environmental factors are prominent for cetaceans, while behavior is the prominent domain for pinnipeds. To test these hypotheses, peer-reviewed articles were coded, providing both qualitative insights and quantitative representations of each domain's prevalence. The research uncovered the focal domains …

Pilot Study: Effects Of Whole Body Vibrational Therapy On Equine Epaxial Muscle Soreness, Riley Leibeck

Undergraduate Honors Thesis Projects

Whole body vibrational therapy (WBV) is well-studied in people, but there is a paucity of research of its effect on horses. It is suggested that WBV use in horses increases performance, aids in recovery, and stimulates nerves, bones, and muscles in ways that normal exercise does not. The purpose of this pilot study was to determine if frequent WBV therapy sessions affect back soreness in horses using pressure algometry. Most sporthorses will experience back soreness in their careers, and it is regarded as one of the most common causes of poor performance in equine athletes. Five horses were measured for …

Investigation Of Potential Gut Health Biomarkers In Broiler Chicks Challenged By Campylobacter Jejuni And Submitted To A Continuous Water Disinfection Program, Tilemachos Mantzios, Despoina E. Kiousi, Georgia D. Brellou, Georgios A. Papadopoulos, Vangelis Economou, Marili Vasilogianni, Elisavet Kanari, Evanthia Petridou, Ilias Giannenas, Guillermo Tellez-Isaias, Aglaia Pappa, Alex Galanis, Vasilios Tsiouris

Poultry Science Faculty Publications and Presentations

The exploration of novel biomarkers to assess poultry health is of paramount importance, not only to enhance our understanding of the pathogenicity of zoonotic agents but also to evaluate the efficacy of novel treatments as alternatives to antibiotics. The present study aimed to investigate potential gut health biomarkers in broiler chicks challenged by Campylobacter jejuni and subjected to a continuous water disinfection program. A total of 144 one-day-old hatched broiler chicks were randomly allocated to four treatment groups with four replicates each, according to the following experimental design: Group A received untreated drinking water; Group B received drinking water treated …

Phenotypic And Functional Characterization Of Bovine Adipose-Derived Mesenchymal Stromal Cells, Vitali V. Maldonado, Sriya Pokharel, Jeremy G. Powell, Rebekah M. Samsonraj Dr.

Animal Science Faculty Publications and Presentations

Background: Mesenchymal stem cells (MSCs) are increasingly trialed in cellular therapy applications in humans. They can also be applied to treat a range of diseases in animals, particularly in cattle to combat inflammatory conditions and aging-associated degenerative disorders. We sought to demonstrate the feasibility of obtaining MSCs from adipose tissue and characterizing them using established assays. Methods: Bovine adipose MSCs (BvAdMSCs) were isolated using in-house optimized tissue digestion protocols and characterized by performing a colony formation assay, cell growth assessments, cell surface marker analysis by immunocytochemistry and flow cytometry, osteogenic and adipogenic differentiation, and secretion of indoleamine 2,3-dioxygenease (IDO). Results: …

Time Series Modeling To Ascertain Age In Fisheries Management, Kathleen Sue Kirch

OES Theses and Dissertations

The ability to assign accurate ages of fish is important to fisheries management. Accurate ageing allows for the most reliable age-based models to be used to support sustainability and maximize economic benefit. Structures used to age include bones, scales, and most commonly ear bones (otoliths). Assigning age relies on validating putative annual marks by evaluating accretional material laid down in patterns in fish otoliths, typically by marginal increment analysis. These patterns often take the shape of a sawtooth wave with an abrupt drop in accretion yearly to form an annual band and are typically validated qualitatively. Researchers have shown keen …

Varecia Rubra (Red Ruffed Lemur) Diel Activity And Calling At Andranobe, Masoala National Park, Madagascar, Hannah Elena Hilden-Reid

Dissertations and Theses

With respect to the natural variation in abiotic and biotic conditions present between daytime and nighttime periods, many animal species show evolutionary adaptations specialized for diurnality, nocturnality, or crepuscularity. Biologists have traditionally viewed categorizations of this kind as fixed within taxonomic groups, emphasizing how intricately species’ survival is contingent on the ability to adapt to low light, high light, or twilight conditions. However, movement away from such distinct temporal niche categories began within chronobiological studies following the discovery of more flexible patterns of activity in numerous taxa during the late 1970s. This shift generated increased interest in elucidating the complex …

Climate Change-Associated Declines In Water Clarity Impair Feeding By Common Loons, Walter H. Piper, Max R. Glines, Kevin C. Rose

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Climate change has myriad impacts on ecosystems, but the mechanisms by which it affects individual species can be difficult to pinpoint. One strategy to discover such mechanisms is to identify a specific ecological factor related to survival or reproduction and determine how that factor is affected by climate. Here we used Landsat imagery to calculate water clarity for 127 lakes in northern Wisconsin from 1995 to 2021 and thus investigate the effect of clarity on the body condition of an aquatic visual predator, the common loon (Gavia immer). In addition, we examined rainfall and temperature as potential predictors …

The Impact Of Essential Amino Acids On The Gut Microbiota Of Broiler Chickens, Thyneice Taylor-Bowden, Sarayu Bhogoju, Collins N. Khwatenge, Samuel N. Nahashon

Agricultural and Environmental Sciences Faculty Research

The research involving the beneficial aspects of amino acids being added to poultry feed pertaining to performance, growth, feed intake, and feed conversion ratio is extensive. Yet currently the effects of amino acids on the gut microbiota aren’t fully understood nor have there been many studies executed in poultry to explain the relationship between amino acids and the gut microbiota. The overall outcome of health has been linked to bird gut health due to the functionality of gastrointestinal tract (GIT) for digestion/absorption of nutrients as well as immune response. These essential functions of the GI are greatly driven by the …

Vigilance And Foraging Behaviors Of Two Sciurid Species Between College Campuses And Urban Environments, Patrick Geyer, Zoe Buffington, Lorelei E. Patrick

SACAD: Scholarly Activities

A comparison between the extent that sciurid specimens display vigilance and foraging behaviors on college campuses against specimens within urban environments. Observations of fox squirrels and western gray squirrels were taken from the Squirrel-Net behavioral database used for this project. We found there was a significant difference between the percent vigilance behaviors and foraging behaviors on college campuses compared to urban environments. This suggests that squirrels residing on college campuses are more desensitized to pedestrian activity and foot traffic compared to squirrels that inhabit urban areas.

Pre And Post Breeding Morphometric Profile Of European Rabbit (Oryctolagus Cuniculus), Rao Zahid Sattar, Rana Manzoor Ahmad, Abdul Majid Khan, Muhammad Altaf, Muhammad Rizwan, Sajjad Yaseen

Journal of Bioresource Management

After 1950s, a continuous decline in the population of Oryctolagus cuniculus has urged the IUCN to declare it an endangered species. There is a serious need to take conservational steps for Oryctolagus cuniculus breeds by research work on their different morphological and physiological aspects. The current study evaluates the growth of European rabbit through morphometric profile at pre breeding, post 1^st breeding and post 2^nd breeding stages in order to find out the growth trends of the European rabbits at different breeding stages. The studied sample comprised of 42 pairs for each breed (New Zealand White and American …

Biological Significances Of Environmental Pollution In The New Calabar River, Southern Nigeria: A Case Study In Zooplankton Composition, Ibienebo Davies Imachrist, Francis David Sikoki, Philomina Kika, Davies Ibienebo Chris

Journal of Bioresource Management

The study was conducted for three months (May to July 2020), focusing on the physicochemical parameters and zooplankton composition in the Ogbogoro region of the New Calabar River in Nigeria. This investigation was carried out at three distinct monitoring stations. The physicochemical parameters were determined using standard ecological analytic procedures. PAST and SPSS were used for the statistical analysis. The temperature ranged between 26.5 to 33 ºC, salinity (1.23 to 1.86 %), pH (7.4 to 9.62), Total Dissolved Solids (2419 to 5,817 mg/L), conductivity (223.83 to 7,328 μS/cm), turbidity (3.415 to 15.05 NTU) and Dissolved Oxygen (3.8 to 6.8 mg/L). …

In Silico Analysis Of C-Type Lectins As Co-Infection Receptors Of Dengue And Chikungunya Viruses In Aedes Aegypti, Munawir Sazali, R. C. Hidayat Soesilohadi, Nastiti Wijayanti, Tri Wibawa, Arif Nur Muhammad Ansori

Makara Journal of Science

Aedes aegypti is a primer vector of dengue virus (DENV) and chikungunya virus (CHIKV). The susceptibility of mosquitoes to DENV and CHIKV depends on their recognition receptor of pathogens. C-type lectins (CTLs) are an important mediator of virus infection in A. aegypti. This study aims to identify potential receptors and determine the binding affinity between ligand–receptor interaction, CTLs and virus envelopes (DENV-1, 2, 3, and 4 and CHIKV) interaction based on in silico analysis. Sample sequences were obtained from GenBank (NCBI), and 10 CTLs were acquired from VectorBase. Homology modeling based on a minimum standard of 20% was processed …

Effectiveness Of Frog Skin Secretions Against Uv-B Radiation, Connor Mcgaha, Kinkade Mcmurray, Lee B. Kats

Seaver College Research And Scholarly Achievement Symposium

As an increasing number of their species face possible extinction, amphibian populations have been steadily declining over the past decades (IUCN). While various factors have been suggested or proven to be partially responsible for this reduction, increased ultraviolet B radiation (UVBR) appears to be one of the more prominent explanations, especially when considering the continual thinning of the Earth’s ozone layer due to anthropogenic climate change. However, it has also been discovered that skin secretions, which are reported to function as a component of amphibians’ innate immune systems, may have an effect on UVBR (Cramp and Franklin). With this in …

Materials And Methods Developed For The Recording And Analysis Of Behavior In The Common Marmoset (Callithrix Jacchus)., Christian Wintle

UNO Student Research and Creative Activity Fair

Materials and methods developed for the recording and analysis of behavior in the common marmoset (Callithrix jacchus).

Christian J. Wintle^a, Jordan B. Hernandez^a,b,c, Dobromir Dotov^d, and Jonathan B. Clayton^a,b,e,f,g

^aDepartment of Biology, University of Nebraska at Omaha, Omaha, NE, USA

^bNebraska Food for Health Center, University of Nebraska-Lincoln, Lincoln, NE, USA

^cDepartment of Genetics, Cell Biology, and Anatomy, University of Nebraska Medical Center, NE, USA

^dDepartment of Biomechanics, University of Nebraska at Omaha, Omaha, NE, USA

^eDepartment of Food Science and Technology, University of Nebraska-Lincoln, Lincoln, …

Recent Progress On Gene-Deleted Liveattenuated African Swine Fever Virus Vaccines, Hiep L.X. Vu, David Scott Mcvey

Department of Animal Science: Faculty Publications

African Swine Fever (ASF) is a highly lethal viral disease in swine, with mortality rates approaching 100%. The disease has spread to many swine-producing countries, leading to significant economic losses and adversely impacting global food security. Extensive efforts have been directed toward developing effective ASF vaccines. Among the vaccinology approaches tested to date, liveattenuated virus (LAV) vaccines produced by rational deleting virulence genes from virulent African Swine Fever Virus (ASFV) strains have demonstrated promising safety and efficacy in experimental and field conditions. Many gene-deleted LAV vaccine candidates have been generated in recent years. The virulence genes targeted for deletion from …

Recent Progress On Gene-Deleted Liveattenuated African Swine Fever Virus Vaccines, Hiep Vu, David Scott Mcvey

Department of Animal Science: Faculty Publications

African Swine Fever (ASF) is a highly lethal viral disease in swine, with mortality rates approaching 100%. The disease has spread to many swine-producing countries, leading to significant economic losses and adversely impacting global food security. Extensive efforts have been directed toward developing effective ASF vaccines. Among the vaccinology approaches tested to date, liveattenuated virus (LAV) vaccines produced by rational deleting virulence genes from virulent African Swine Fever Virus (ASFV) strains have demonstrated promising safety and efficacy in experimental and field conditions. Many gene-deleted LAV vaccine candidates have been generated in recent years. The virulence genes targeted for deletion from …

Interior Least Terns (Sternula Antillarum Athalassos) In A Landscape Of Fear: Explaining Predator Frequency On Sandbars Using Habitat Features, Carice N. Kimbrell

ATU Theses and Dissertations 2021 - Present

Causes of colony failure in interior least terns (Sternula antillarum athalassos) have been a prevalent topic for researchers investigating this previously endangered species. In Arkansas, these colonies are primarily located on sandbars formed along the McClellan-Kerr Arkansas River Navigation System. Reduction in nesting site quality may put this sensitive species at a greater risk for predator encounters. In my first chapter, I identified which sandbar characteristics resulted in higher frequencies of predator encounters at interior least tern colonies. In my second chapter, I investigated how those predators influenced colony production and whether interior least tern colonies exhibited similar …

Daily Injection Of The Β2 Adrenergic Agonist Clenbuterol Improved Muscle Glucose Metabolism, Glucose-Stimulated Insulin Secretion, And Hyperlipidemia In Juvenile Lambs Following Heat-Stress-Induced Intrauterine Growth Restriction, Rachel L. Gibbs, James Wilson, Rebecca M. Swanson, Joslyn K. Beard, Zena M. Hicks, Haley Beer, Eileen Marks-Nelson, Ty B. Schmidt, Jessica Lynn Petersen, Dustin T. Yates

Department of Animal Science: Faculty Publications

Stress-induced fetal programming diminishes β2 adrenergic tone, which coincides with intrauterine growth restriction (IUGR) and lifelong metabolic dysfunction. We determined if stimulating β2 adrenergic activity in IUGR-born lambs would improve metabolic outcomes. IUGR lambs that received daily injections of saline or the β2 agonist clenbuterol from birth to 60 days were compared with controls from pair-fed thermoneutral pregnancies. As juveniles, IUGR lambs exhibited systemic inflammation and robust metabolic dysfunction, including greater (p < 0.05) circulating TNF, IL-6, and non-esterified fatty acids, increased (p < 0.05) intramuscular glycogen, reduced (p < 0.05) circulating IGF-1, hindlimb blood flow, glucose-stimulated insulin secretion, and muscle glucose oxidation. Daily clenbuterol fully recovered (p < 0.05) circulating TNF, IL-6, and nonesterified fatty acids, hindlimb blood flow, muscle glucose oxidation, and intramuscular glycogen. Glucose-stimulated insulin secretion was partially recovered (p < 0.05) in clenbuterol-treated IUGR lambs, but circulating IGF-1 was not improved. Circulating triglycerides and HDL cholesterol were elevated (p < 0.05) in clenbuterol-treated IUGR lambs, despite being normal in untreated IUGR lambs. We conclude that deficient β2 adrenergic regulation is a primary mechanism for several components of metabolic dysfunction in IUGR-born offspring and thus represents a potential therapeutic target for improving metabolic outcomes. Moreover, benefits from the β2 agonist were likely complemented by its suppression of IUGR-associated inflammation.

Low Similarity Between Parasite Communities Of Ten Sympatric Carangid Species, Juan M. Osuna-Cabanillas, Emigdio Marín-Enríquez, Ana P. Martínez-Falcón, Juan T. Timi, Francisco N. Morales-Serna

Harold W. Manter Laboratory of Parasitology: Library Materials

Host phylogeny and ecological convergence are two factors thought to influence the structure of parasite communities. The aims of this study were to determine the diversity of metazoan parasites of 10 sympatric fish species of the family Carangidae from the southeastern Gulf of California, and to analyze their similarity at infracommunity and component community levels, in order to determine if the host species, particularly those congeneric with similar ecological characteristics, exhibit similar assemblages of parasites. In total, 874 fish specimens were examined and 40 parasite species were identified. The component community was composed by 21 parasite species in Caranx caninus …

Description Of A New Species (Eucypris Dorlionensis N. Sp.) (Ostracoda, Crustacea)From Türkiye And A Cladistic Analysis Of The Genus Eucypris, Fi̇li̇z Batmaz, Mehmet Yavuzatmaca, Okan Külköylüoğlu

Turkish Journal of Zoology

This is the first clustering analysis of the 53 species of the genus Eucypris where we used 28 plesiomorphic and apomorphic character states in the Winclada/NONA program. Accordingly, Eucypris dorlionensis n. sp. was clustered within Group 2, in which the new species was clearly separated from the other species of the genus based on the shape of the carapace, presence of fine hair-like setae on the carapace surface, the position of the maximum height of the carapace, and length ratio of terminal claws of the second antenna. Eucypris dorlionensis n. sp. was collected from a trough in Eskişehir province in …