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Asas-Ssr Triennnial Reproduction Symposium: Looking Back And Moving Forward—How Reproductive Physiology Has Evolved: Fetal Origins Of Impaired Muscle Growth And Metabolic Dysfunction: Lessons From The Heat-Stressed Pregnant Ewe, Dustin T. Yates, Jessica Lynn Petersen, Ty B. Schmidt, Caitlin N. Cadaret, Taylor L. Barnes, Robert J. Posont, Kristin A. Beede Apr 2018

Asas-Ssr Triennnial Reproduction Symposium: Looking Back And Moving Forward—How Reproductive Physiology Has Evolved: Fetal Origins Of Impaired Muscle Growth And Metabolic Dysfunction: Lessons From The Heat-Stressed Pregnant Ewe, Dustin T. Yates, Jessica Lynn Petersen, Ty B. Schmidt, Caitlin N. Cadaret, Taylor L. Barnes, Robert J. Posont, Kristin A. Beede

Department of Animal Science: Faculty Publications

Intrauterine growth restriction (IUGR) is the second leading cause of perinatal mortality and predisposes offspring to metabolic disorders at all stages of life. Muscle-centric fetal adaptations reduce growth and yield metabolic parsimony, beneficial for IUGR fetal survival but detrimental to metabolic health after birth. Epidemiological studies have reported that IUGRborn children experience greater prevalence of insulin resistance and obesity, which progresses to diabetes, hypertension, and other metabolic disorders in adulthood that reduce quality of life. Similar adaptive programming in livestock results in decreased birth weights, reduced and inefficient growth, decreased carcass merit, and substantially greater mortality rates prior to maturation. …


Identification Of Genes Directly Responding To Dlk1 Signaling In Callipyge Sheep, Hui Yu, Jolena N. Waddell, Shihuan Kuang, Ross L. Tellam, Noelle E. Cockett, Christopher A. Bidwell Apr 2018

Identification Of Genes Directly Responding To Dlk1 Signaling In Callipyge Sheep, Hui Yu, Jolena N. Waddell, Shihuan Kuang, Ross L. Tellam, Noelle E. Cockett, Christopher A. Bidwell

Animal, Dairy, and Veterinary Science Faculty Publications

Background

In food animal agriculture, there is a need to identify the mechanisms that can improve the efficiency of muscle growth and protein accretion. Callipyge sheep provide excellent machinery since the up-regulation of DLK1 and RTL1 results in extreme postnatal muscle hypertrophy in distinct muscles. The aim of this study is to distinguish the genes that directly respond to DLK1 and RTL1 signaling from the genes that change as the result of muscle specific effects.

Results

The quantitative PCR results indicated that DLK1 expression was significantly increased in hypertrophied muscles but not in non-hypertrophied muscles. However, RTL1 was up-regulated in …


The Activity Of Saccharolytic Enzymes In Collembola Is Associated With Species Affinity For Caves, Andrea Parimuchová, Vladimír Šustr, Miloslav Devetter, Ondřej Vošta, Ionuţ Popa, Ľubomír Kováč Apr 2018

The Activity Of Saccharolytic Enzymes In Collembola Is Associated With Species Affinity For Caves, Andrea Parimuchová, Vladimír Šustr, Miloslav Devetter, Ondřej Vošta, Ionuţ Popa, Ľubomír Kováč

International Journal of Speleology

The activity of enzymes associated with digestion can reflect food availability and feeding preferences of invertebrates in a particular habitat. Caves are mostly nutrient-poor habitats lacking primary production. In the present study the enzymatic activity of cellulases, trehalases and chitinases was measured in eight collembolan species differently associated with the cave environment: the troglobionts (obligate cave species) Pseudacherontides spelaeus and Protaphorura janosik; the eutroglophiles Ceratophysella denticulata, Folsomia candida and Heteromurus nitidus; the subtroglophiles Hypogastrura aequepilosa and Orthonychiurus rectopapillatus; and the trogloxene (not associated with caves) Megaphorura arctica. Qualitative enzymatic patterns and quantitative differences in species activity were …


Persistent Annual Migration Patterns Of A Specialist Seabird, Rachael Orben, Nobuo Kokubun, Abram Fleishman, Alexis Will, Takashi Yamamoto, Scott Shaffer, Rosana Paredes, Akinori Takahashi, Alexander Kitaysky Apr 2018

Persistent Annual Migration Patterns Of A Specialist Seabird, Rachael Orben, Nobuo Kokubun, Abram Fleishman, Alexis Will, Takashi Yamamoto, Scott Shaffer, Rosana Paredes, Akinori Takahashi, Alexander Kitaysky

Faculty Publications, Biological Sciences

Specialization can make animals vulnerable to rapid environmental changes. For long-lived seabirds, foraging specialization may make individuals especially sensitive, as climatic changes are currently occurring over the course of one lifetime. The Bering Sea is a dynamic subarctic and arctic ecosystem where windblown sea ice mediates annual productivity and subsequent pathways to upper trophic levels. Red-legged kittiwakes Rissa brevirostris are endemic surface foraging seabirds specializing on myctophid fishes during reproduction. Their degree of specialization outside the breeding season is less understood. We examined their non-breeding ecology (migration, distribution, isotopic niche) during 4 winters with varying sea ice extent. Although we …


Performance And Carcass Characteristics Of Steers Fed With Two Levels Of Metabolizable Energy Intake During Summer And Winter Season, R A. Arias, J P. Keim, M Gandarillas, A Velasquez, C Alvarado-Gilis, T L. Mader Apr 2018

Performance And Carcass Characteristics Of Steers Fed With Two Levels Of Metabolizable Energy Intake During Summer And Winter Season, R A. Arias, J P. Keim, M Gandarillas, A Velasquez, C Alvarado-Gilis, T L. Mader

Department of Animal Science: Faculty Publications

Climate change is producing an increase on extreme weather events around the world such as flooding, drought and extreme ambient temperatures impacting animal production and animal welfare. At present, there is a lack of studies addressing the effects of climatic conditions associated with energy intake in finishing cattle in South American feed yards. Therefore, two experiments were conducted to assess the effects of environmental variables and level of metabolizable energy intake above maintenance requirements (MEI) on performance and carcass quality of steers. In each experiment (winter and summer), steers were fed with 1.85 or 2.72 times of their requirements of …


Testing The Reliability Of The Use Of The Draminski® For Estrus Detection In Heifers, Ashlyn Thomas Apr 2018

Testing The Reliability Of The Use Of The Draminski® For Estrus Detection In Heifers, Ashlyn Thomas

Honors Theses

No abstract provided.


Eating Crickets? Nutrient Mineral Content Of Two Cricket Species And Chapul Cricket Protein Bars Using Mp-Aes, Nathan Hopkins Apr 2018

Eating Crickets? Nutrient Mineral Content Of Two Cricket Species And Chapul Cricket Protein Bars Using Mp-Aes, Nathan Hopkins

Student Scholar Showcase

Global agriculture is beset by numerous challenges which must be surmounted to feed a developing world, from combating climate change to the cultivation of sustainable food products. This, in addition to protein and nutrient deficiencies in the developing world, makes considering alternative protein sources, such as a crickets, an attractive option. Crickets use a fraction of the land and water that protein sources like beef cattle do, and can be cultivated in urban environments in stacked boxes. This research investigation aims to quantify the nutrient mineral content (Iron, Sodium, Potassium, Calcium, and Magnesium) of two cricket species (Acheta domesticus …


Functional Plain Yogurt Enhanced With Inulin And Aloe Vera, Janny Melissa Mendoza Mencia Apr 2018

Functional Plain Yogurt Enhanced With Inulin And Aloe Vera, Janny Melissa Mendoza Mencia

LSU Master's Theses

Yogurt has been recognized as a healthy food. Nutritional value of yogurt can be increased with the addition of aloe vera juice (AVJ) and inulin. People are interested in consuming products without artificial ingredients and with high content of bioactive compounds. The aims of this study were to develop a functional plain yogurt enhanced with inulin and AVJ, to evaluate the physicochemical properties, the enumeration of Streptococcus thermophilus and Lactobacillus bulgaricus, inulin content, and consumer acceptability. Six treatments were evaluated at day 1, 7, 14 and 30 at 4°C. Treatments were prepared using 2% fat milk, ABY culture, 5 …


Dairy Digest 2018: Home Is Where The Cows Are, South Dakota State University Dairy Club Apr 2018

Dairy Digest 2018: Home Is Where The Cows Are, South Dakota State University Dairy Club

Dairy Digest

This is the 2018 Dairy Digest published annually by the South Dakota State University Dairy Club. The Digest contains information and news about the activities and members of the SDSU Dairy Club for the academic year 2017 - 2018.


Wpa News 105 (2018), World Pheasant Association Apr 2018

Wpa News 105 (2018), World Pheasant Association

Galliformes Specialist Group and Affiliated Societies: Newsletters

WPA News (Spring 2018), number 105

Published by the World Pheasant Association


Supplementation And Reproductive Strategies For Beef Females As Part Of A May-Calving Herd In The Nebraska Sandhills, Alicia Caitlin Lansford Apr 2018

Supplementation And Reproductive Strategies For Beef Females As Part Of A May-Calving Herd In The Nebraska Sandhills, Alicia Caitlin Lansford

Department of Animal Science: Dissertations, Theses, and Student Research

The objective of these 4 studies was to evaluate the effects of management decisions on reproductive performance of beef females. Experiment 1 evaluated the efficacy of a novel s.c. prostaglandin F2a injection on estrus synchronization and pregnancy success in yearling beef heifers. Heifers receiving a 2 mL s.c. injection of Lutalyse HighCon had similar estrus response and pregnancy rates compared to 5 mL Lutalyse i.m. within 2 different estrus synchronization programs. In experiment 2, May-calving heifers and primiparous cows were allotted to receive either no supplementation or supplement (0.45 or 0.91 kg/d per animal, heifers or primiparous cows, …


Prediction Factors For Release Of Wildlife At A Midwestern Rehabilitation Facility, Abigail E. Smith Apr 2018

Prediction Factors For Release Of Wildlife At A Midwestern Rehabilitation Facility, Abigail E. Smith

Undergraduate Honors Thesis Projects

Wildlife rehabilitation is a large and internationally known field with thousands of rehabilitators around the world. Resources, such as time and money, are extremely limited in rehabilitation facilities and not all animals are candidates for release due to injuries or illnesses that make them unlikely to survive in the wild. Understanding what factors predict release would be useful in focusing limited resources, but there has been little investigation previously. The purpose of this study is to determine what factors affect the survival of mammals and birds at an American Midwest wildlife rehabilitation center. It was found that animals admitted with …


Killi-Data News (Fall), Tyrone Genade Mar 2018

Killi-Data News (Fall), Tyrone Genade

Killifish Research Review

Many interesting papers have been published over the last three months. The large volume of papers coupled with the start of the new college semester (and the workload it brings) delayed this issue of Killi-Data News. But better late than never—or so I hope! In this issue Richard van der Laan provides an insightful review of the recent Aphanius papers as to their taxonomic implications and questions. The systematic issues he raises show the importance of the Molecular project: we need to get more samples of the various cyprinodontiforme families to resolve unsettled systematic and taxonomic issues. In the Next …


The Use Of Grape By-Products As A Nutrient Rich Cattle Feed, Zachary Christman Mar 2018

The Use Of Grape By-Products As A Nutrient Rich Cattle Feed, Zachary Christman

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

In this article you will learn about how to use the grape stems, skins and pulp that are generated by the wine industry. Ruminant animals such as cattle can digest this inexpensive yet nutrient rich material. The complete process from wine press to cattle feed is covered in this article. The historical background of using grape by-products and methods to preserve this food source is also presented.


An Analysis Of The Characteristics And Practices Of Selected Florida Small Livestock Producers: A Focus On Production And Processing, Jannette R. Bartlett, David Nii O. Tackie, Dana Reid, Akua Adu-Gyamfi, Angela Mckenzie-Jakes Mar 2018

An Analysis Of The Characteristics And Practices Of Selected Florida Small Livestock Producers: A Focus On Production And Processing, Jannette R. Bartlett, David Nii O. Tackie, Dana Reid, Akua Adu-Gyamfi, Angela Mckenzie-Jakes

Professional Agricultural Workers Journal

The study assessed the characteristics and practices of small livestock producers, emphasizing production and processing. Data were obtained from a convenience sample of seventy small producers from selected counties in Florida, and analyzed using descriptive statistics, including chi-square tests. The socioeconomic characteristics showed that part-time producers, White producers, middle-aged producers, fairly educated producers, and moderate-income producers dominated the group. A majority of the producers practiced rotational grazing, fed a combination of forage and concentrate, and less than half conducted soil tests regularly. Moreover, over half had parasite problems and treated them primarily with anthelmintics. Nearly all producers sold animals live, …


Winter Feeding Of Elk In The Greater Yellowstone Ecosystem And Its Effects On Disease Dynamics, Gavin C. Cotterill, Paul C. Cross, Erik K. Cole, Rebecca K. Fuda, Jared D. Rogerson, Brandon M. Scurlock, Johan T. Du Toit Mar 2018

Winter Feeding Of Elk In The Greater Yellowstone Ecosystem And Its Effects On Disease Dynamics, Gavin C. Cotterill, Paul C. Cross, Erik K. Cole, Rebecca K. Fuda, Jared D. Rogerson, Brandon M. Scurlock, Johan T. Du Toit

Wildland Resources Faculty Publications

Providing food to wildlife during periods when natural food is limited results in aggregations that may facilitate disease transmission. This is exemplified in western Wyoming where institutional feeding over the past century has aimed to mitigate wildlife–livestock conflict and minimize winter mortality of elk (Cervus canadensis). Here we review research across 23 winter feedgrounds where the most studied disease is brucellosis, caused by the bacterium Brucella abortus. Traditional veterinary practices (vaccination, test-and-slaughter) have thus far been unable to control this disease in elk, which can spill over to cattle. Current disease-reduction efforts are being guided by ecological …


Editorial: Harm And Benefit Of Plant And Fungal Secondary Metabolites In Food Animal Production, Michael D. Flythe Mar 2018

Editorial: Harm And Benefit Of Plant And Fungal Secondary Metabolites In Food Animal Production, Michael D. Flythe

Animal and Food Sciences Faculty Publications

No abstract provided.


A Comparative Analysis Of Microbial Profile Of Guinea Fowl And Chicken Using Metagenomic Approach, Sarayu Bhogoju, Samuel N. Nahashon, Xiaofei Wang, Carl E. Darris, Agnes Kilonzo-Nthenge Mar 2018

A Comparative Analysis Of Microbial Profile Of Guinea Fowl And Chicken Using Metagenomic Approach, Sarayu Bhogoju, Samuel N. Nahashon, Xiaofei Wang, Carl E. Darris, Agnes Kilonzo-Nthenge

Agricultural and Environmental Sciences Faculty Research

Probiotics are live microbial feed supplements that promote growth and health to the host by minimizing non-essential and pathogenic microorganisms in the host’s gastrointestinal tract (GIT). The campaign to minimize excessive use of antibiotics in poultry production has necessitated development of probiotics with broad application in multiple poultry species. Design of such probiotics requires understanding of the diversity or similarity in microbial profiles among avian species of economic importance. Therefore, the objective of this research was to establish and compare the microbial profiles of the GIT of Guinea fowl and chicken and to establish the microbial diversity or similarity between …


Managing Pregnancy In Ewes, Department Of Primary Industries And Regional Development, Western Australia Mar 2018

Managing Pregnancy In Ewes, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock factsheets

The health and nutrition of the pregnant ewe largely determines how successful lambing is in any given year.

Careful monitoring and management of the pregnant ewe during the 5-month foetal development will help her cope with the rigours of birth and lactation, and also influence lamb survival, birthweight and production for life.


Improvement Of Chilling Efficiency And Product Quality Of Broiler Carcasses Using Sub-Zero Saline Solutions For Chilling, Morgan Metheny Mar 2018

Improvement Of Chilling Efficiency And Product Quality Of Broiler Carcasses Using Sub-Zero Saline Solutions For Chilling, Morgan Metheny

Master's Theses

Sub-zero saline solutions were evaluated for the improvement of chilling efficiency and product quality of broiler carcasses. In this study, four experiments were conducted to chill broiler carcasses using different saline solutions and chilling temperatures in the Meat Processing Center at California Polytechnic State University (Cal Poly, San Luis Obispo, CA) or in the processing plant at Foster Farms (Livingston, CA). In Experiment I, three salt concentrations and solution temperatures (0% NaCl/0.5°C, 4% NaCl/-2.41°C, and 8% NaCl/-5.08°C) were used to chill carcasses. The fillets in brine chilling at sub-zero temperatures showed lower shear forces than the fillets in 0% NaCl …


What's Required To Process Seafood - A Briefing Of Requirements, Cindy Borgwordt Feb 2018

What's Required To Process Seafood - A Briefing Of Requirements, Cindy Borgwordt

Title III Professional Development Reports

What’s Required to Process Seafood – a Briefing of Requirements presented by Cindy Borgwordt, LU Fish Health Specialist, at the 2018 North Central Regional Aquaculture and Missouri Aquaculture Association meeting at Kansas City, Missouri


Cognitive Dysfunction In Naturally Occurring Canine Idiopathic Epilepsy, Rowena M.A. Packer, Paul D. Mcgreevy, Hannah Salvin, Michael Valenzuela, Chloe M. Chaplin, Holger A. Volk Feb 2018

Cognitive Dysfunction In Naturally Occurring Canine Idiopathic Epilepsy, Rowena M.A. Packer, Paul D. Mcgreevy, Hannah Salvin, Michael Valenzuela, Chloe M. Chaplin, Holger A. Volk

Neurology Collection

Globally, epilepsy is a common serious brain disorder. In addition to seizure activity, epilepsy is associated with cognitive impairments including static cognitive impairments present at onset, progressive seizure-induced impairments and co-morbid dementia. Epilepsy occurs naturally in domestic dogs but its impact on canine cognition has yet to be studied, despite canine cognitive dysfunction (CCD) recognised as a spontaneous model of dementia. Here we use data from a psychometrically validated tool, the canine cognitive dysfunction rating (CCDR) scale, to compare cognitive dysfunction in dogs diagnosed with idiopathic epilepsy (IE) with controls while accounting for age. An online cross-sectional study resulted in …


Food Systems, Sustainability And Health Afs 404, Michael Cerbo Feb 2018

Food Systems, Sustainability And Health Afs 404, Michael Cerbo

Library Impact Statements

No abstract provided.


Contractile Response Of Bovine Lateral Saphenous Vein To Ergotamine Tartrate Exposed To Different Concentrations Of Molecularly Imprinted Polymer, Manoj B. Kudupoje, James L. Klotz, Alexandros Yiannikouris, Karl A. Dawson, Kyle R. Mcleod, Eric S. Vanzant Feb 2018

Contractile Response Of Bovine Lateral Saphenous Vein To Ergotamine Tartrate Exposed To Different Concentrations Of Molecularly Imprinted Polymer, Manoj B. Kudupoje, James L. Klotz, Alexandros Yiannikouris, Karl A. Dawson, Kyle R. Mcleod, Eric S. Vanzant

Animal and Food Sciences Faculty Publications

Ergot alkaloids, in their active isomeric form, affect animal health and performance, and adsorbents are used to mitigate toxicities by reducing bioavailability. Adsorbents with high specificity (molecularly imprinted polymers: MIP) adsorb ergot alkaloids in vitro, but require evaluation for biological implications. Using ex vivo myography, synthetic polymers were evaluated for effects on the bioactivity of ergotamine tartrate (ETA). Polymers were first evaluated using isotherms. Lateral saphenous veins were collected from 17 steers for four independent studies: dose response of ETA, adsorbent dose response, validation of pre-myograph incubation conditions and MIP/ non-molecularly imprinted polymer (NIP) comparison. Norepinephrine normalized percent contractile response …


Crayfish Harvesting Practices In The Southern Atchafalaya River Basin: Quantitative And Qualitative Assessment Of Harvester Techniques And Hydrologic Connectivity Influence On Harvesting Strategies, Ivan A. Vargas-Lopez Jan 2018

Crayfish Harvesting Practices In The Southern Atchafalaya River Basin: Quantitative And Qualitative Assessment Of Harvester Techniques And Hydrologic Connectivity Influence On Harvesting Strategies, Ivan A. Vargas-Lopez

LSU Master's Theses

Fisheries produce important impacts around the world through the exploitation of a wide range of species. In Louisiana, crayfish is the most emblematic crustacean and supports a multi-million industry based on pond culture and harvest from natural habitats. Although the economic value (USD) of wild-harvested crayfish has decreased from 10% to 3% of total crayfish value from 2013 to 2015, wild harvested crayfish are highly desired by many consumers and have a strong socio-cultural importance in Louisiana and other Gulf of Mexico coastal regions. This project evaluated harvesting practices by: 1) field observation and mapping of harvest sites in southwestern …


2017 Long-Term Summary Of Kentucky Forage Variety Trials, Gene L. Olson, S. Ray Smith, Christopher D. Teutsch Jan 2018

2017 Long-Term Summary Of Kentucky Forage Variety Trials, Gene L. Olson, S. Ray Smith, Christopher D. Teutsch

Forage Symposium at the Kentucky Cattlemen’s Convention

Forage crops occupy approximately 7 million acres in Kentucky. Forages provide a majority of the nutrition for beef, dairy, horse, goat, sheep, and wildlife in the state. In addition, forage crops play an environmentally friendly role in soil conservation, water quality, and air quality. There are over 60 forage species adapted to the climate and soil conditions of Kentucky. Only 10 to 12 of these species occupy the majority of the acreage, but within these species there is a tremendous variation in varieties. This publication was developed to provide a user-friendly guide to choosing the best variety for producers based …


Is There A Link Between Aging And Microbiome Diversity In Exceptional Mammalian Longevity?, Graham M. Hughes, John Leech, Sebastien J. Puechmaille, Jose V. Lopez, Emma C. Teeling Jan 2018

Is There A Link Between Aging And Microbiome Diversity In Exceptional Mammalian Longevity?, Graham M. Hughes, John Leech, Sebastien J. Puechmaille, Jose V. Lopez, Emma C. Teeling

Biology Faculty Articles

A changing microbiome has been linked to biological aging in mice and humans, suggesting a possible role of gut flora in pathogenic aging phenotypes. Many bat species have exceptional longevity given their body size and some can live up to ten times longer than expected with little signs of aging. This study explores the anal microbiome of the exceptionally long-lived Myotis myotis bat, investigating bacterial composition in both adult and juvenile bats to determine if the microbiome changes with age in a wild, long-lived non-model organism, using non-lethal sampling. The anal microbiome was sequenced using metabarcoding in more than 50 …


Antral Follicular Count Is A Tool That May Allow The Selection Of More Precocious Bradford Heifers At Weaning, R. Santa Cruz, R. A. Cushman, C. Viñoles Jan 2018

Antral Follicular Count Is A Tool That May Allow The Selection Of More Precocious Bradford Heifers At Weaning, R. Santa Cruz, R. A. Cushman, C. Viñoles

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Although antral follicle count is a repeatable parameter across life that is positively associated with fertility, its use at weaning as a tool to discard less fertile heifers has not been extensively evaluated. The hypotheses of this work are: 1) maximum antral follicle count (MAFC) is repeatable between weaning and pre breeding evaluations, allowing selection of more fertile heifers at an early age, 2) heifers with high MAFC have growth and development parameters linked to an earlier puberty and pregnancy, 3) MAFC has a positive correlation with AMH concentrations, so that both could be used inter changeably. In this study, …


Nebraska Invasive Plants Field Guide, Nebraska Invasive Species Program Jan 2018

Nebraska Invasive Plants Field Guide, Nebraska Invasive Species Program

Nebraska Invasive Species Program

Invasive species are plants, animals or pathogens that are non-native to an ecosystem. They cause harm to the economy, environment or human health. They negatively affect native species and ecosystems and interfere with outdoor recreation opportunities. This guide identifies federal and state-listed noxious weeds. Federal noxious weeds are regulated by the U.S. Department of Agriculture; State noxious weeds are regulated by the Nebraska Department of Agriculture, Animal and Plant Health Protection, Noxious Weed Program. Aquatic invasive species are listed and regulated by Nebraska Game and Parks Commission.

ABSINTH WORMWOOD • AMUR HONEYSUCKLE • AUTUMN OLIVE • BRITTLE NAIAD • CALLERY …


Crosstalk Among Lncrnas, Micrornas And Mrnas In The Muscle ‘Degradome’ Of Rainbow Trout, Bam Paneru, Ali Ali, Rafet Al-Tobasei, Brett Kenney, Mohamed Salem Jan 2018

Crosstalk Among Lncrnas, Micrornas And Mrnas In The Muscle ‘Degradome’ Of Rainbow Trout, Bam Paneru, Ali Ali, Rafet Al-Tobasei, Brett Kenney, Mohamed Salem

Faculty & Staff Scholarship

In fish, protein-coding and noncoding genes involved in muscle atrophy are not fully characterized. In this study, we characterized coding and noncoding genes involved in gonadogenesis-associated muscle atrophy, and investigated the potential functional interplay between these genes. Using RNA- Seq, we compared expression pattern of mRNAs, long noncoding RNAs (lncRNAs) and microRNAs of atrophying skeletal muscle from gravid females and control skeletal muscle from age-matched sterile individuals. A total of 852 mRNAs, 1,160 lncRNAs and 28 microRNAs were differentially expressed (DE) between the two groups. Muscle atrophy appears to be mediated by many genes encoding ubiquitin- proteasome system, autophagy related …