Digital Commons Network^™

High Prevalence Of The Amphibian Chytrid Fungus (Batrachochytrium Dendrobatidis) Across Multiple Taxa And Localities In The Highlands Of Ethiopia, David J. Gower, Thomas M. Doherty-Bone, Roman K. Aberra, Abebe Mengistu, Silvia Schwaller, Michele Menegon, Rafael O. De Sá, Samy A. Saber, Andrew A. Cunningham, Simon P. Loader

Biology Faculty Publications

Surveys of the potentially lethal amphibian chytrid fungus (Batrachochytrium dendrobatidis - Bd) in Africa are patchy, especially in some regions of high species endemicity. We present results of the first Bd surveys of wild amphibians in Ethiopia, for two upland regions on either side of the Rift Valley: the Bale Mountains and the Kaffa region. Surveys were opportunistic so that robust interpretation of the data is limited. Utilizing diagnostic qPCR assays, 51 out of 120 frogs (14 species in 10 genera) tested positive for Bd at altitudes of 1,620–3,225 m, across all genera and species, and all but …

The Effects Of Drought On The Abundance Of The Blue Crab, Callinectes Sapidus, In The Ace Basin Nerr In South Carolina, Kirk Parmenter

All Dissertations

Blue crabs make up one of the most important commercial fisheries in the U.S. but there has been some concern over the health of blue crab populations due to large declines in landings seen in recent years. There is a significant positive correlation between river discharge and commercial landings suggesting that drought may be to blame for the recent decline in crab numbers. The work I completed for my dissertation tested multiple hypotheses examining the link between decreasing freshwater discharge, the subsequent rise in salinity, and the abundance of blue crabs in the ACE Basin National Estuarine Research Reserve.
To …

Aquatic Animal Health Subprogram: Development Of A Dna Microarray To Identify Markers Of Disease In Pearl Oysters (Pinctada Maxima) And To Assess Overall Oyster Health: Final Frdc Report – Project 2008/030, David Raftos, Sham Nair, Melanie Croxford, Brian J. Jones

Fisheries Research Reports

Objectives: 1. To construct a cDNA library using healthy and stressed oysters. 2. To design and print DNA microarray slides for the analysis of diseased states in pearl oysters (P. maxima). 3. To use the DNA microarray to identify molecular markers that differentiate between pearl oysters that are stressed from those that appear to be healthy. To use the DNA microarray to test for markers of adverse health in pearl oysters that appear to be affected by environmental stressors other than OOD.

Agricultural Research Magazine May-June 2012

Agricultural Research Magazine

Agricultural Research

150 Years of Making History

USDA's 150th Anniversary- May 15, 2012

Forum: Alternative Strategies For Keeping Animals Healthy, Cyril G. Gay

Agricultural Research Magazine

The general public needs to know more about the importance of preventing and controlling livestock diseases and the financial impact they would have on our lives and food supply if left unchecked. Part of our mission at the USDA Agricultural Research Service is to conduct research to protect the safety of our nation’s agriculture and food supply through improved disease detection, prevention, and control.

Antibiotics are recognized as one of the most important biomedical discoveries for treating infectious diseases of animals and humans. The use of antibiotics has had a major impact on increases in food-animal production and has resulted …

Genetic Variation In Potentially Virulent Vibrio Parahaemolyticus From The Northern Gulf Of Mexico, Nicholas Felix Noriea Iii

Dissertations

Vibrio parahaemolyticus (V_p) is a gram-negative bacterium found naturally in marine and estuarine environments. V_p is found in oysters including those which are later consumed by the public. Sub-populations of potentially virulent Vp contain specific virulence factors and are relevant human pathogens capable of causing gastroenteritis, wound infection, and death. The tdh and trh genes, both encoding hemolysins, have been correlated with the majority of clinical V_p isolates but have not been shown to be the definitive virulence factors.

A total of 146 V_p isolates from the northern Gulf of Mexico were collected and probed …

Host Specificity Of Ecuadorian Bat Flies (Diptera: Streblidae), Eric Stamper

Mahurin Honors College Capstone Experience/Thesis Projects

Diptera: Streblidae are ectoparasites of bat populations found in many locations throughout the world. These ectoparasites are generally known as bat flies. They attach themselves to the wing membranes and bodies of bats to bite and feed on their blood. Using a large sample consisting of over 2,000 bats and 6,000 bat flies, I have conducted a study of the degree of host specificity of these ectoparasites. Host specificity is a measurement of the degree to which a particular parasite is restricted to its host or hosts. Here I find evidence to support more recent findings that bat flies are …

Cell-Mediated Immunity In Porcine Reproductive And Respiratory Syndrome Virus, Rajeshwari Parida

School of Veterinary and Biomedical Sciences: Dissertations, Theses, and Student Research

Porcine reproductive and respiratory syndrome virus is a significant swine pathogen which exhibits considerable sequence diversity. In an attempt to identify highly conserved T-cell epitopes contained in proteins of this virus, we examined heptadecamer peptides spanning the sequence of the PRRSV nonstructural proteins 9, 10 and 11, all of them are highly conserved, for their ability to elicit a recall proliferative and interferon-gamma response in peripheral blood mononuclear cells obtained from pigs immunized against the type-II PRRSV strain FL-12. These studies led to the identification of seven peptides, two from each NSP 9 and NSP 10 and, three from NSP …

Clam (Corbicula Fluminea) As A Potential Sentinel Of Human Norovirus Contamination In Freshwater, Xunyan Ye

Dissertations

The purpose of this study was to evaluate and validate the use of the clam Corbicula fluminea as a sentinel of human noroviruses (HuNoV) contamination in freshwater. The first specific aim was to develop a new method to extract HuNoV RNA from contaminated bivalves (e.g. oysters, clams) that would be much faster than existing methods. The procedure developed includes an initial total RNA extraction using TRI Reagent, followed by HuNoV RNA concentration and purification using biotinylated probe-capture technology. HuNoV RNA is finally detected by real-time RT-PCR. Using bivalve homogenates spiked with HuNoV, 100 PCR detection units of the virus was …

Lameness Associated With A Possible Neural Problem In The Lower Spinal Cord Of Chickens, Gallus Gallus, Gurueswar Nagarajan

Graduate Theses and Dissertations

Since the second half of the twentieth century lameness in broiler chickens has been known to be caused by different types of disorders, however the etiology of several type of lameness remain unknown. Because of the intense selection of broilers for rapid growth, some birds are more prone to physiological insults resulting in lameness. This study focuses on possible neural problems in the lower spinal cord associated with lameness in broilers. Broilers were raised in pens with wire floors and provided with food and water ad libitum. Three groups of birds 1) birds displaying a normal gait (Controls), 2) lame …

A Conceptual Model To Facilitate Amphibian Conservation In The Northern Great Plains, David M. Mushet, Ned H. Euliss Jr., Craig A. Stockwell

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

As pressures on agricultural landscapes to meet worldwide resource needs increase, amphibian populations face numerous threats including habitat destruction, chemical contaminants, disease outbreaks, wetland sedimentation, and synergistic effects of these perturbations. To facilitate conservation planning, we developed a conceptual model depicting elements critical for amphibian conservation in the northern Great Plains. First, we linked upland, wetland, and landscape features to specific ecological attributes. Ecological attributes included adult survival; reproduction and survival to metamorphosis; and successful dispersal and recolonization. Second, we linked ecosystem drivers, ecosystem stressors, and ecological effects of the region to each ecological attribute. Lastly, we summarized information on …

The Origin Of Malarial Parasites In Orangutans, M. Andreína Pacheco, Michael J.C. Reid, Michael A. Schillaci, Carl A. Lowenberger, Biruté M. F. Galdikas, Lisa Jones-Engel, Ananias A. Escalante

Harold W. Manter Laboratory of Parasitology: Library Materials

Background: Recent findings of Plasmodium in African apes have changed our perspectives on the evolution of malarial parasites in hominids. However, phylogenetic analyses of primate malarias are still missing information from Southeast Asian apes. In this study, we report molecular data for a malaria parasite lineage found in orangutans.

Methodology/Principal Findings: We screened twenty-four blood samples from Pongo pygmaeus (Kalimantan, Indonesia) for Plasmodium parasites by PCR. For all the malaria positive orangutan samples, parasite mitochondrial genomes (mtDNA) and two antigens: merozoite surface protein 1 42 kDa (MSP-1₄₂) and circumsporozoite protein gene (CSP) were amplified, cloned, and …

Causes Of Pneumonia Epizootics Among Bighorn Sheep, Western United States, 2008–2010, Thomas E. Besser, Margaret A. Highland, Katherine Baker, E. Frances Cassirer, Neil J. Anderson, Jennifer M. Ramsey, Kristen Mansfield, Darren L. Bruning, Peregrine Wolff, Joshua B. Smith, Jonathan A. Jenks

Natural Resource Management Faculty Publications

Epizootic pneumonia of bighorn sheep is a devastating disease of uncertain etiology. To help clarify the etiology, we used culture and culture-independent methods to compare the prevalence of the bacterial respiratory pathogens Mannheimia haemolytica, Bibersteinia trehalosi, Pasteurella multocida, and Mycoplasma ovipneumoniae in lung tissue from 44 bighorn sheep from herds affected by 8 outbreaks in the western United States. M. ovipneumoniae, the only agent detected at signifi cantly higher prevalence in animals from outbreaks (95%) than in animals from unaffected healthy populations (0%), was the most consistently detected agent and the only agent that exhibited single strain types within each …

The Effect Of Auditory Call Playback On Anuran Detection And Capture Rates, Derek Adam Bozzell

Theses, Dissertations and Capstones

Calls of male anurans during breeding seasons are species-specific identification tools. However, males cease calling after any nearby disturbance, including those of researchers. I proposed a variation on current methods that attempts to reduce this lag in calling after researcher-created disturbance by utilizing the propensity for competition in male frogs. I surveyed 14 breeding sites in Cabell and Wayne counties during the 2010 and 2011 breeding seasons. First, I used traditional visual encounter surveys (VESs). After using automated recording devices to gather site-specific recordings of calls of all species present, I conducted secondary VESs while playing these playlists over a …

An Hsi Report: Industrial Farm Animal Production And Livestock Associated Mrsa (Methicillin Resistant Staphylococcus Aureus), Humane Society International

HSI REPORTS

Staphylococcus aureus is a leading cause of bacterial infection and is increasingly found to be resistant to antibiotic therapy. A newly described type of Methicillin Resistant Staphylococcus aureus carried by farm animals, Livestock Associated MRSA (LA-MRSA), is now causing infections in humans with and without direct livestock contact. A reduction in the non-therapeutic use of antibiotics in feed would likely reduce the capacity of industrial animal agriculture to continue to create, disseminate, and perpetuate a large reservoir of LA-MRSA on a global scale, but more fundamental changes in the way animals are raised for food may be necessary forestall a …

Prevalence Of Antibodies To Canine Parvovirus And Distemper Virus In Wolves In The Canadian Rocky Mountains, Brynn Nelson, Mark Hebblewhite, Vanessa Ezenwa, Todd Shury, Evelyn H. Merrill, Paul C. Paquet, Fiona Schmiegelow, Dale Selp, Geoff Skinner, Nathan Webb

Epidemiology Collection

Wild carnivores are often exposed to diseases via contact with peridomestic host species that travel through the wildland-urban interfaces. To determine the antibody prevalences and relationships to human activity for two common canid pathogens, we sampled 99 wolves (Canis lupus) from 2000 to 2008 for antibodies to canine parvovirus (CPV) and canine distemper virus (CDV) in Banff and Jasper National Parks and surrounding areas of the Canadian Rockies. This population was the source for wolves reintroduced into the Northern Rockies of the US. Of 99 wolves sampled, 94 had detectable antibody to CPV (95%), 24 were antibody-positive for CDV (24%), …

Parasites Of Civets (Mammalia, Viverridae) In Sabah, Borneo: A Coprological Survey, Christina P. Colon, Sharon Patton

Publications and Research

Parasite data were collected from unlogged and selectively logged lowland rain forests in Borneo. Scat from a female Viverra tangalunga (Malay civet) in the unlogged forest contained eggs of Capillaria spp., Trichuris sp., Mamomoganomus sp., and nematode larvae. Scat attributed to V. tangalunga contained reproductive products (eggs/oocysts/cysts/larvae) of Capillaria sp., Toxocara sp., Ancylostoma sp. (probably A. ceylanicum), Isospora spp., strongylate-type eggs (probably Ancylostoma spp.), Paragoni­ mus sp. and other Trematoda eggs, Monocystis sp. cysts, Gnathostoma sp. (probably G. spinigerum), the lungworm Viverrostrongylus brauni, pinworm-type eggs, Eimeria spp., Sarcocystis-type sporocyst, dermanysid mites and mesostigmatid mites. Parasites from gut samples from two …

American Society Of Parasitologists Newsletter, V. 34, No. 2, Winter 2012, Scott Lyell Gardner

American Society of Parasitologists: Newsletter

American Society of Parasitologists Newsletter, v. 34, no. 2, winter 2012

Ectoparasites Of Bats In Mongolia, Part 2 (Ischnopsyllidae, Nycteribiidae, Cimicidae And Acari), Ingo Scheffler, Dietrich Dolch, Jargalsaikhan Ariunbold, Annegret Stubbe, Andreas Abraham, Klaus Thiele

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

This study analyses ectoparasites found on Mongolian bats between 2008 and 2011. We examined 12 different bat species, with a total of 23 ectoparasite species present. Apart from reporting distributions, we also discuss specific host-parasite relationships. Owing to recent taxonomic changes splitting the Myotis mystacinus-group into several new taxa, their corresponding ectoparasite fauna could also be addressed in detail. Introducing ectoparasitic insects at length elsewhere (Scheffler et al. 2010), this paper focuses on the analysis of parasitic Acari. Additional findings for Spinturnicidae (wing mites) and Macronyssidae broadened the spectrum of known parasites. Altogether, the knowledge of bat ectoparasites from Mongolia …

Siphonaptera Of Mongolia And Tuva: Results Of The Mongolian- German Biological Expeditions Since 1962 – Years 1999-2003, Daniel Kiefer, Michael Stubbe, Annegret Stubbe, Scott Lyell Gardner, D. Tserenorov, R. Samiya, D. Otgonbaatar, D. Sumiya, Matthias S. Kiefer

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

This report provides an overview of flea species and the corresponding hosts in Mongolia and Tuva during 1999-2003. The taxonomical development of this vector group of great medical importance covers more than a century of flea research in Mongolia, resulting in the current number of 162 species known from this area.

Changes To The Equine Hindgut Microflora In Response To Antibiotic Challenge, Brittany E. Harlow

Theses and Dissertations--Animal and Food Sciences

Antibiotics are important to equine medicine, but can cause detrimental side-effects including reduced feed intake, allergic reactions, and diarrhea. Antibiotic-associated diarrhea (AAD) is attributed to disruption of the hindgut microflora, permitting proliferation of pathogenic microbes. The objectives were to evaluate the effects of antibiotics on beneficial fecal bacteria, AAD-associated pathogens, microbial species richness and fermentation. Horses were assigned to treatment groups: control (no antibiotics, n=6), trimethoprim-sulfadiazine (oral, n=6), or sodium ceftiofur (IM, n=6). Fecal samples were taken during adaptation (3 wk), antibiotic challenge (1 wk), and withdrawal (1 wk). Fecal cellulolytics decreased by >99% during challenge and did not recover …

Influence Of Dietary Selenium Supplementation Form On Hepatic Transcriptome Profiles Of Maturing Beef Heifers, Zhi Zhang

Theses and Dissertations--Animal and Food Sciences

Our objective was to know how the hepatic transcriptome expression of growing beef (Angus-cross) heifers (0.5 kg gain/day) was affected by the feeding of different sources of dietary (3 mg/day) Se supplements: inorganic Se (ISe, sodium selenite), organic (OSe, Sel-Plex®), or a blend (1.5 mg:1.5 mg) of ISe:OSe (Mix), compared to the adequate but non-Se supplemented “Control”. The biopsied hepatic tissues of these four groups heifers collected at day 168 (when liver Se assimilation had stabilized) after supplements of Se, was subjected to the microarray analysis to assess Se treatment effects.

The results suggest that there were clear differences in …

A Retrospective Study Of Borrelia Burgdorferi Antibodies In Dogs In Minnesota, Aneela Durrani, Sagar Goyal

Turkish Journal of Veterinary & Animal Sciences

In order to determine the seroprevalence of Borrelia burgdorferi antibodies in suspected dogs in Minnesota, the present study examines the database of the Veterinary Diagnostic Laboratory at the University of Minnesota over a 10 year period (2001-June 2010). A total of 1081 serum samples from dogs suspected of having borreliosis were submitted by 112 private veterinary clinics. The samples were tested using an indirect fluorescent antibody (IFA) test. Samples with titers of =>1:320 were considered positive. The rate of seroprevalence of antibodies was 88%. The increase in the rate of yearly seroprevalence of Borrelia burgdorferi antibodies in dogs was …

Use Of Real-Time Pcr To Detect Canine Parvovirus In Feces Of Free-Ranging Wolves, L. David Mech, Emily S. Almberg, Douglas Smith, Sagar Goyal, Randall S. Singer

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Using real-time PCR, we tested 15 wolf (Canis lupus) feces from the Superior National Forest (SNF), Minnesota, USA, and 191 from Yellowstone National Park (YNP), USA, collected during summer and 13 during winter for canine parvovirus (CPV)-2 DNA. We also tested 20 dog feces for CPV-2 DNA. The PCR assay was 100%sensitive and specific with a minimum detection threshold of 104 50% tissue culture infective dose. Virus was detected in two winter specimens but none of the summer specimens. We suggest applying the technique more broadly especially with winter feces.

Apparent Prevalence Of Swine Brucellosis In Feral Swine In The United States, Kerri Pedersen, Sarah N. Bevins, Brandon S. Schmit, Mark W. Lutman, Michael P. Milleson, Clint T. Turnage, Troy T. Bigelow, Thomas J. Deliberto

Human–Wildlife Interactions

Samples were collected in 35 states as part of a national monitoring system to detect multiple diseases in feral swine (Sus scrofa). During March 2009 through December 2010, we collected serum samples from 4,479 feral swine from 13 states, and 159 animals tested were seropositive for brucellosis. No difference in likelihood of infection was found between males and females, but adults were more likely than sub-adults or juveniles to be exposed to brucellosis. Feral swine sampled during winter months also were more likely to be seropositive than animals sampled during other seasons. Apparent prevalence varied among states, and …

Public Perceptions Of Wildlife-Associated Disease: Risk Communication Matters, Daniel J. Decker, William F. Siemer, Darrick T. N. Evenson, Richard C. Stedman, Katherine A. Mccomas, Margaret A. Wild, Kevin T. Castle, Kirsten M. Leong

Human–Wildlife Interactions

Wildlife professionals working at the interface where conflicts arise between people and wild animals have an exceptional responsibility in the long-term interest of sustaining society’s support for wildlife and its conservation by resolving human–wildlife conflicts so that people continue to view wildlife as a valued resource. The challenge of understanding and responding to people’s concerns about wildlife is particularly acute in situations involving wildlife-associated disease and may be addressed through One Health communication. Two important questions arise in this work: (1) how will people react to the message that human health and wildlife health are linked?; and (2) will wildlife-associated …

The Rise And Fall Of Crassostrea Virginica Oyster Reefs: The Role Of Disease And Fishing In Their Demise And A Vignette On Their Management, Eric N. Powell, John M. Klinck, Kathryn Ashton-Alcox, Eileen E. Hofmann, Jason Morson

CCPO Publications

We describe a model designed to simulate the shell carbonate budget of an oyster reef.We identify five parameters descriptive of basic characteristics of the shell carbonate budget of a reef that limit simulation accuracy. Two describe the TAZ (taphonomically-active zone) and the distribution of shell carbonate within it. One is the taphonomic rate in the TAZ. Two determine the volume contribution of shell carbonate and the taphonomic loss rate within the reef framework. For Mid-Atlantic estuaries, model simulations suggest that reef accretion only occurs if oyster abundance is near carrying capacity. Simulations further suggest that reef accretion is infeasible for …

Evaluation Of Elevated Bait Trays For Attracting Blackbirds (Icteridae) In Central North Dakota, George M. Linz, Jamison B. Winter, William J. Bleier

United States Department of Agriculture Wildlife Services: Staff Publications

Sunflower (Helianthus annuus L.) became an economically important crop in North Dakota in the 1970s, providing a major source of food for post-breeding blackbirds (Icteridae). Reducing local blackbird populations with rice grains treated with an avicide is one proposed alternative for reducing sunflower damage. In fall 2007 and 2008, we evaluated the idea of attracting blackbirds to rice-baited trays attached to wire cages supplied with live blackbirds. During our observations (1011 h), we saw 3888 birds, consisting of 25 species and 12 families, on the bait trays. Blackbirds made up 90.4% of the bird observations, whereas sparrows (Emberizidae) made …

Effect Of Predator Type, Season, Brood Size, And West Nile Virus Infection On The Nest Defense Behavior Of Male And Female Eastern Bluebirds, Kayde Lynn Gilbert

Online Theses and Dissertations

The intensity of nest defense by birds can be influenced by many factors, including a parent's sex, brood size, stage of breeding season, type of predator, and physical condition. Because previous studies have produced conflicting results concerning the effects of these factors on the nest defense behavior of birds, additional studies are needed to better clarify how and why such factors influence behavior. No one to date has examined the possible effect of a viral infection on avian nest defense behavior. Thus, my objectives were to determine the effect of adult sex, brood size, stage of the breeding season, predator …

Determination Of Acute Phase Proteins After Experimental Streptococcus Iniae Infection In Tilapia (Oreochromis Niloticus L.), Azi̇me Küçükgül Güleç, İbrahi̇m Cengi̇zler

Turkish Journal of Veterinary & Animal Sciences

Tilapia (Oreochromis niloticus Linnaeus, 1758) were infected with Streptococcus iniae (Cat No: ATCC 29178) and the plasma changes in the acute phase protein (APP) members were examined at different time periods. A total of 72 fish with average body weights of 60 g were used. Fish in the infected group (group I) were intraperitoneally injected with S. iniae at 3.3 × 10^5 colony forming unit (CFU) in 0.1 mL level to the fish. The other group (group II) was subjected to handling stress near the infection. The control group was constituted by providing optimum conditions. On days 7, 14, and …