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A Pcr/Sequencing Technique To Identify Species And Genotypes Of Haemonchus From Mixed Trichostrongyle Egg Dna Recovered From Livestock Fecal Samples, Pratiksha Khanal

Electronic Theses and Dissertations

Six primer pairs, each with a pair of genus-specific and universal second internal transcribed spacer (ITS2) primers were evaluated to amplify and sequence the ITS2 region of nuclear ribosomal DNA to identify the species and genotypes of Haemonchus from livestock fecal samples containing mixtures of trichostrongyle nematode eggs. Based upon the use of universal ITS2 primers on Haemonchus adults, the ITS2 region has been shown to contain three fixed single-nucleotide differences between H. placei and H. contortus. It is clinically useful to identify the species and genotypes of Haemonchus infecting livestock, but it has not been possible in fecal …

Comparative Study Of Growth Patterns In Seven Strains Of Japanese Quail Using Nonlinear Regression Modeling, Hadi Farajiarough, Mohammad Rokouei, Ali Maghsoudi, Mahmoud Ghazaghi

Turkish Journal of Veterinary & Animal Sciences

The aim of this study was to compare the growth pattern of seven strains of Japanese quail including Wild, Italian Speckled, Tuxedo, Scarlett, English white, White button, and A&M Texas by nonlinear growth functions including Gompertz, Richards, logistic, Lopez, and Weibull functions. The body weights of the unselected randomly bred populations of these strains were measured weekly from 1 to 42 days of age and then used to fit functions. The fitness of each function was assessed by statistics including the mean square error, Akaike information criterion, Bayesian information criterion, and adjusted coefficient of determination. The results showed that Gompertz …

Spatial Distribution And Dietary Niche Breadth Of The Leopard Panthera Pardus (Carnivora: Felidae) In The Northeastern Himalayan Region Of Pakistan, Faraz Akrim, Tariq Mahmood, Muhammad Sajid Nadeem, Shaista Andleeb, Siddiqa Qasim

Turkish Journal of Zoology

Knowledge of a predato's diet is important for understanding its ecology and for predicting its influence on the dynamics of prey populations. We investigated the spatial distribution and diet composition of the leopard (Panthera pardus) in the northeastern Himalayan region of Pakistan. We used molecular scatology technique to identify scats of common leopard collected from the field. The leopard was recorded at 30 different surveyed sites with an elevational range between 757-1891 m a.s.l. Its diet comprised 17 prey species, including both wild and domestic prey. Frequency of occurrence of wild prey was approximately 35% of the total leopard diet, …

Mesostigmata Mites (Acari: Parasitiformes) Associated With Birds And Their Nests From, Mohamed Waleed Negm, Azza Abdelgawad Mohamed, Hosam Mohamed Khalil El-Gepaly, Safaa Mohamed Abdelaziz

Turkish Journal of Zoology

A survey of gamasid mites (Arachnida: Acari: Mesostigmata) associated with domestic and wild birds in Egypt was conducted. In total, 16 species within 10 families were collected from 22 bird species. The most abundant species belonged to the genera Dermanyssus Dugès (Dermanyssidae), Ornithonyssus Sambon, and Steatonyssus Kolenati (both Macronyssidae). Among various birds examined, the distribution and occurrence of mites were recorded. Taxonomic remarks about the morphology of the collected mites are presented to facilitate species discrimination for non-acarologists. Steatonyssus longipes Radovsky & Yunker, 1963, previously described as a new species from the Egyptian slit-faced bat, Nycteris thebaica Geoffroy (Chiroptera), is …

Three New Records From Phylinae (Hemiptera: Heteroptera: Miridae) For The Turkish Fauna, Gülten Yazici, Erol Yildirim

Turkish Journal of Zoology

This study was conducted in the Erzurum province of Turkey during 2009-2014. The species Criocoris crassicornis (Hahn, 1834), Europiella artemisiae (Becker, 1864), and Paredrocoris pectoralis Reuter, 1878 were recorded for the first time from Turkey. The important taxonomic characters are described and photographs or illustrations are provided.

Oceanic, Latitudinal, And Sex-Specific Variation In Demography Of A Tropical Deepwater Snapper Across The Indo-Pacific Region, Ashley J. Williams, C. Wakefield, Stephen J. Newman, Elodie Vourey, Francisco J. Abascal, Tuikolongahau Halafihi, Jeremie Kaltavara, Simon J. Nicol

Fisheries Research Articles

Deepwater tropical fisheries provide an important source of income and protein to Pacific and Indian Ocean coastal communities who are highly dependent on fish for food security. The development of quantitative assessments and management strategies for these deepwater fisheries has been hindered by insufficient biological and fisheries data. We examine the age-specific demography of the pygmy ruby snapper Etelis carbunculus, an important target species in tropical deepwater fisheries, across 90° of longitude and 20° of latitude in the Pacific and Indian Oceans. Our results show that growth of E. carbunculus varies significantly between oceans and sexes and across latitudes …

Cross-Reactive Immunity To Porcine Reproductive And Respiratory Syndrome Virus And Its Contribution To Protection, Ignacio Correas

School of Veterinary and Biomedical Sciences: Dissertations, Theses, and Student Research

Due to the vast geographical distribution and significant economic losses generated, porcine reproductive and respiratory syndrome virus (PRRSV) can be considered the most important swine pathogen of contemporary times. Current control and eradication strategies against PRRSV have difficulty succeeding because of their complex nature and the absence of an effective vaccine. A major obstacle for PRRSV vaccine development is the broad heterogeneity of the virus, both at the genetic and antigenic level, its rapid evolution, and an incomplete knowledge of the immune responses responsible for clearing the virus from the host. Specifically, how known correlates of protection against PRRSV—neutralizing antibodies …

A Global Community Effort To Decipher The Unique Biology Of Annual Killifish, Nibia Berois, Graciela Garcia, Rafael O. De Sá

Biology Faculty Publications

Over the past 50 years, annual killifishes arose as alternative model organisms for studies of vertebrate biology. The annual fish offers exceptional advantages for studies of genetics, genomics, developmental biology, population dynamics, ecology, biogeography, and evolution. They inhabit extremely variable freshwater environments in Africa and South America, have a short lifespan and a set of unique and fascinating developmental characteristics. Embryos survive within the dry substrate during the dry season, whereas the adult population dies. Thus, the survival of the populations is entirely dependent on the buried embryos that hatch the next rainy season. Although Old and New World species …

Diet Of The Bull Shark, Carcharhinus Leucas, And The Tiger Shark, Galeocerdo Cuvier, In The Eastern Pacific Ocean, Colombo Estupiñán-Montaño, José F. Estupiñán-Ortiz, Luis G. Cedeño-Figueroa, Felipe Galvan Magaña, Carlos J. Polo-Silva

Turkish Journal of Zoology

This study presents information on the diet of two shark species, Carcharhinus leucas and Galeocerdo cuvier, that inhabit the southeastern Pacific Ocean. The stomachs were collected from October 2003 to July 2005 in Ecuador. Stomachs of 41 C. leucas and six G. cuvier were analyzed. According to the index of relative importance (%IRI), the most important prey for C. leucas were fishes: family Ophichthidae (13.41%), Tylosurus pacificus (9.79%), Katsuwonus pelamis (4.54%), and fish remains (44.81%). G. cuvier, for its part, consumed squids: Ancistrocheirus lesueuri (45.14%), Pholidoteuthis boschmaii (7.81%), and Octopoteuthis spp. (5.17%), as well as turtles: Caretta caretta (9.7%), Lepidochelys …

The Phenology Of Pulvinaria Floccifera Westwood (Hemiptera: Coccomorpha: Coccidae), A New Invasive Pest On Ornamentals Outdoors In Poland, Bozena Lagowska, Katarzyna Golan, Katarzyna Kmiec, Izabela Kot, Edyta Gorska Drabik, Katarzyna Goliszek

Turkish Journal of Zoology

The phenology of Pulvinaria floccifera infesting common holly was studied from June 2009 to October 2011 in Central Poland. Live specimens were most abundant on the leaves in July and August, while dead individuals were most numerous in winter and early spring each year. The scale completed one generation per year in the field and both the second and third instar nymphs overwintered. Following the spring molting to the 3rd instar or to the young adult females were observed in April and early May. The young adult females were first recorded in the second 10-day period of May. Oviposition occurred …

Molecular Detection Of Nosema Spp. And Black Queen-Cell Virusin Honeybees In Van Province, Turkey, Beki̇r Oğuz, Zeynep Karapinar, Ender Di̇nçer, Mustafa Serdar Değer

Turkish Journal of Veterinary & Animal Sciences

This study was planned to determine the prevalences of the Nosema spp. and the black queen-cell virus (BQCV) among honeybees (Apis mellifera) raised in the province of Van by PCR and to determine the molecular characteristics of the determined isolates. A total of 260 adult worker bees from 26 colonies at 5 apiary locations belonging to the province of Van in April and May 2015 were collected for this reason. Samples were examined microscopically. In the case of positivity, spore identification was done by multiplex PCR. Reverse transcription/PCR analysis (RT/PCR) was carried out for the BQCV analysis. At the end …

Large Animal Genetic Engineering Summit 2016 Proceedings, Utah State University

Animal, Dairy, and Veterinary Science Faculty Publications

It is our great pleasure to welcome you to the first Large Animal Genetic Engineering (LAGE) Summit. Our objectives for the summit are twofold: 1) to provide an update on new approaches to the genetic modification of large animal species for development of better animal models for biomedical research, biomanufacturing, and improved agricultural production; and 2) to provide a forum for discussions on funding mechanisms and regulations effecting development of genetically engineered large animals. Our first summit is being held in Bethesda, Maryland, to facilitate participation by representatives from various federal agencies who either fund or regulate the production of …

The Effects Of Drought On Diets Of Apex Predators In The South African Lowveld Inferred By Fecal Hair Analysis, Shelby Wade

Mahurin Honors College Capstone Experience/Thesis Projects

To properly manage offtake quotas and conservation efforts, Balule Nature Reserve (South Africa) instituted a study in 2014 to determine prey species selection by megapredators. In 2015, Balule Nature Reserve received about 190 mm less rainfall between the months of January and June than in 2014 (116 mm less than average). This study compares the diets of lions and hyaenas between 2014 and 2015. Prey species consumed were determined by fecal analysis, and results were compared to prey availability. Sixteen, 1 km2 plots were chosen from the 400 km2 Reserve. Between June and August 2015, we walked three, 1 km …

Assessment Of Behavior And Social Dynamics In A Newly-Forming Group Of Captive Western Lowland Gorillas, Sarah Murphey Huskisson

Graduate Theses

This study presents behavioral data of a recently-formed western lowland gorilla (Gorilla gorilla gorilla) group at Riverbanks Zoo and Garden in Columbia, South Carolina, from the initial stages of group formation through the first several months after introduction. The group consists of a male (19 years), two half-sisters (both 10 years), and an unrelated female (20 years). I collected 15-minute focal animal samples for three hours twice a week in two observation blocks, the first lasting from 7/17/15 to 9/11/15, and the second lasting from 10/30/15 to 1/3/16. A total of 99.25 observation hours were collected. It was predicted that …

Mandibular Morphology And Dietary Preferences In Two Pygmy Molecrickets Of The Genus Xya (Orthoptera: Tridactylidae), Katerina Kuravova, Petr Kocarek

Turkish Journal of Zoology

Pygmy mole crickets (Tridactylidae) are an interesting but little-known group of Orthoptera; their food biology and dietary preferences have not been adequately studied. Our study focused on the diet composition and associated functional morphology of the mandibles in two European species: Xya pfaendleri Harz, 1970 and X. variegata (Latreille, 1809). Based on postmortem gut content analyses, the studied species feed mainly on detritus (decaying organic particles), representing 91% and 97% of the diet in X. pfaendleri and X. variegata, respectively. The mandibular structures are associated with the processing of such food. The incisor area is equipped with three robust and …

Differential Contribution Of Genomic Regions To Marked Genetic Variation And Prediction Of Quantitative Traits In Broiler Chickens, Rostam Abdollaha- Arpanahi, Gota Morota, Bruno D. Valente, Andreas Kranis, Guilherme J. M. Rosa, Daniel Gianola

Department of Animal Science: Faculty Publications

Background: Genome-wide association studies in humans have found enrichment of trait-associated single nucleotide polymorphisms (SNPs) in coding regions of the genome and depletion of these in intergenic regions. However, a recent release of the ENCyclopedia of DNA elements showed that ~80 % of the human genome has a biochemical function. Similar studies on the chicken genome are lacking, thus assessing the relative contribution of its genic and non-genic regions to variation is relevant for biological studies and genetic improvement of chicken populations. Methods: A dataset including 1351 birds that were genotyped with the 600K Affymetrix platform was used. We partitioned …

New Chigger (Acari) Records From Arkansas Amphibians (Caudata, Anura) And Reptiles (Sauria), M. B. Connior, C. T. Mcallister, L. A. Durden, S. E. Trauth, H. W. Robison

Journal of the Arkansas Academy of Science

No abstract provided.

Pharmacokinetics And Bioavailability Of Three Promising Tilmicosin-Loaded Lipid Nanoparticles In Comparison With Tilmicosin Phosphate Following Oral Administration In Broiler Chickens, Ali Rassouli, Alwan Al-Qushawi, Fatemeh Atyabi, Seyed Mostafa Peighambari, Mehdi Esfandyari-Manesh, Gholam Reza Shams

Turkish Journal of Veterinary & Animal Sciences

Tilmicosin (TLM) is a semisynthetic antimicrobial agent used mainly in poultry and cattle, but it has relatively poor oral bioavailability. This study was conducted to compare the bioavailability (BA) and main pharmacokinetic (PK) parameters of TLM after oral administration of tilmicosin phosphate (TLM-PH) and three newly prepared lipid nanoparticles (LNPs) of TLM including solid lipid nanoparticles (SLNs), nanostructured lipid carriers (NLCs), and lipid-core nanocapsules (LNCs). Sixty broiler chickens were divided into eight groups. In four treatment groups (n = 10), each bird was given a single oral dose (20 mg/kg) of a TLM formulation after overnight fasting, and in four …

Growing South Dakota (Winter 2016), College Of Agriculture &. Biological Sciences

Growing South Dakota (Publication of the College of Agriculture, Food and Environmental Sciences)

This issue includes the 2015 South Dakota Agricultural Experiment Station Annual Report.

[Page] 2 Director's Message
[Page] 3 Concentrating On Cattle: Researcher Studying Mechanics To Improve Reproduction Efficiency In Beef Cattle
[Page] 5 At The Forefront: SDSU Diagnostic Lab Scientists Sequence Avian Influenza Genome
[Page] 6 Seeking Superior Wheat: Breeder Using Extensive Genome Testing To Improve Winter Wheat Cultivars
[Page] 8 Profiles In Leadership: Plant And Fungi Interactions May Offer New Plant Production Possibilities
[Page] 9 Targeting Emerging Diseases: Plant Pathologists Working To Better Manage Soybean & Sunflower Diseases
[Page] 10 Compelling New Crop: Carinata Offers Potential For Crop Diversity, …

Animal Sentience: The Other-Minds Problem, Stevan Harnad

Animal Sentience

The only feelings we can feel are our own. When it comes to the feelings of others, we can only infer them, based on their behavior — unless they tell us. This is the “other-minds problem.” Within our own species, thanks to language, this problem arises only for states in which people cannot speak (infancy, aphasia, sleep, anaesthesia, coma). Our species also has a uniquely powerful empathic or “mind-reading” capacity: We can (sometimes) perceive from the behavior of others when they are in states like our own. Our inferences have also been systematized and operationalized in biobehavioral science …

Maturity Characteristics Of Pacific Saury During Fishing Season In The Northwest Pacific, Wen-Bin Huang, Yu-Chun Huang

Journal of Marine Science and Technology–Taiwan

Pacific saury is a commercially important fish in the Northwest Pacific. This study examined the maturity characteristics, gonadosomatic index (GSI), condition factor (CF), and ovarian developmental stage of the saury stock in three months of the fishing season (from May to December) in the Northwest Pacific. The maturity characteristics of saury varied among these three months (May, July, and October) in 2009. In May, large GSI and CF values with advanced ovarian developmental stages but small knob lengths (KnL) and body weights (BW) were found. Also in this month, the large-sized saury (> 29 cm) possessed large GSI values and …

Suitability Of Great South Bay, New York To Blooms Of Pfiesteria Piscicida And P. Shumwayae Prior To Superstorm Sandy, October 29, 2012, Pawel Tomasz Zablocki

Theses and Dissertations

Pfiesteria piscicida and P. shumwayae are toxic dinoflagellates implicated in massive fish kills in North Carolina and Maryland during 1990s. A set of physical, chemica l, and biological factors influence population dynamics of these organisms. This study employs i nformation gathered from relevant literature on temperature, salinity, dissolved oxygen, pH, turbulent mixing, and dissolved nutrients, bacteria, algae, microzooplankton, mesozooplankton, bivalve m ollusks, finfish, and other toxic dinoflagellates, which influence Pfiesteria population dynamics. The research focused on whether conditions in the Great South Bay, Long Island, New York were suitable to blooms of Pfiesteria species prior to the passage of superstorm …

Shorebird Migratory Stopover Responses To Local And Regional Change: Habitat Decisions In A Vanishing Landscape, Caitlyn Gillespie

School of Natural Resources: Dissertations, Theses, and Student Research

Understanding the consequences of anthropogenic change for migratory species is challenging because although they have evolved to cope with environmental uncertainty, migrants still rely on predictable relationships within and among habitats to make informed decisions. Calidris shorebirds rely on ephemeral wetlands during northward migration through mid-continental North America, where favorable habitat conditions are annually and regionally unpredictable and increasingly altered by land-use change. During spring 2013 and 2014, we assessed Calidris habitat use in the Rainwater Basin (RWB) and the Prairie Pothole Region (PPR) at both local and landscape scales. Although anthropogenic change has altered the wetland landscape in both …

Applying Gps And Accelerometers To The Study Of African Savanna (Loxodonta Africana) And Asian Elephant (Elephas Maximus) Welfare In Zoos, Matthew Robert Holdgate

Dissertations and Theses

African savanna elephants (Loxodonta africana) and Asian elephants (Elephas maximus) are a focus of welfare research in zoos due to their high intelligence, complex social structure, and sheer size. Due to these challenges, some argue that zoos are inherently incapable of providing appropriate care for elephants, while others believe that zoos can fulfill the needs of these species with improved husbandry. There is a general consensus from both within and outside of zoos, however, that zoos must improve their elephant programs or cease exhibiting these animals altogether. Now more than ever, applied research on zoo elephant welfare is needed to …

Age Structure Of Hemidactylus Turcicus (L., 1758) (Sauria: Gekkonidae) From Southwestern Anatolia (Muğla, Turkey), Betül Kanat, Cemal Varol Tok

Turkish Journal of Zoology

In this study, a total of 36 (12♂♂, 18♀♀, 6 juveniles) Hemidactylus turcicus specimens, caught in the vicinity of Muğla (Turkey) between 2006 and 2011, were evaluated using the skeletochronology method. The mean snout-to-vent length (SVL) was measured as 28.45 ± 1.92 mm for juveniles, 50.53 ± 1.06 mm for males, and 51.1 ± 0.75 mm for females. When the cross-sections were examined, the age range was determined to be 4-8 years in the males and 4-9 years in the females. Individuals reach sexual maturity in 2-3 years. The maximum age was calculated as 9 years for a female. It …

Assessing Age, Growth, And Reproduction Of Alburnus Mossulensis And Acanthobrama Marmid (Cyprinidae) Populations In Karakaya Dam Lake (Turkey), Aysel Alkan Uçkun, Di̇dem Gökçe

Turkish Journal of Zoology

In total, 626 individuals of Alburnus mossulensis and 586 individuals of Acanthobrama marmid were collected monthly from Karakaya Dam Lake on the upper Euphrates River. The gonadosomatic index, somatic condition, oocyte size, and fecundity were calculated on a monthly basis. Reading of scales indicated that the maximum age was 4+ years for A. mossulensis and A. marmid. The estimated length-weight relationships were W = 0.206 × FL^{2.065} for females and W = 0.119 × FL^{2.138} for males in A. mossulensis, and W = 0.029 × FL^{2.678} for females and W = 0.030 × FL^{2.631} for males in A. marmid. Growth …

A Karyotype Comparison Among 3 Species Of Allactaga (Mammalia: Dipodidae) From Central Iran, Maryam Rahimi-Pozve, Mansoureh Malekian, Mahmoud-Reza Hemami

Turkish Journal of Zoology

We studied karyotype and chromosomal characteristics of 3 species of five-toed jerboa from central Iran, including Allactaga firouzi, A. williamsi, and A. elater. This study revealed that the 3 species possessed a diploid number of 48 chromosomes. The first pair of chromosomes was significantly larger than other chromosomes in all 3 species. The total length of the haploid genome of Allactaga elater was longer than those of the other 2 species, and most of the chromosomes of the 3 species were metacentric. Based on total form percentage, interchromosomal asymmetry index, and centromeric index, Allactaga elater had the highest interchromosomal asymmetry. …

Histomorphometric And Fractal Analysis Of Femoral, Tibial, And Metatarsal Compact Bone Samples In Sheep (Ovis Aries), Goat (Capra Hircus), And Roe Deer (Capreolus Capreolus), Alexandru Gudea, Andrei Stefan

Turkish Journal of Veterinary & Animal Sciences

Histological sections of femur, tibia, and metatarsals originating from sheep (Ovis aries), goat (Capra hircus), and roe deer (Capreolus capreolus) were examined in this study. Our research focused mainly on the quantitative characteristics of the microstructure of these bones. The areas, perimeters, minimum and maximum diameters of the secondary Haversian units, as well as structures of the primary osteonal units were assessed using comparative statistical methods. In addition to these parameters, the present paper investigated the usefulness of fractal analysis (fractal dimension and lacunarity), a new approach that quantifies the complexity and the emptiness pattern of biological structures. Moreover, our …

Documentation Of The Black-Footed Ferret, Mustela Nigripes On The Standing Rock Indian Reservation, Mobridge, South Dakota, Michael P. Gutzmer, Jeffrey C. Kelly

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Since 1991, 19 specific black-footed ferret reintroduction projects have been conducted across 8 States, Canada, and Mexico. All five of the first ferret reintroductions (from 1991 to 1996) continue to be occupied by ferrets. The photographs of October 31 and November 1 are the first unequivocal documentation of black-footed ferrets on the Standing Rock Indian Reservation. Ferrets observed on Standing Rock may be dispersals from the nearby Cheyenne River Sioux Indian Reservation to the south. The nearest re-introduction site for ferrets is approximately 20 miles away, in Whitehorse, South Dakota, and the observation of ferrets on Standing Rock could document …

On Individual, Sex And Age Differentiation Of Indian House Crow (Corvus Splendens) Call: A Preliminary Study In Potohar, Pakistan, Waqas Hameed, Inayat Ullah, Safia Janjua, Fakhar -I- Abbas, Afsar Mian

Journal of Bioresource Management

Considering importance of acoustics studies in population biology, 500 calls of the Indian House Crow (Corvus splendens) were recorded in morning - mid-afternoon hours (January-February, 2009) from 23 sites of urban areas of Potahar (Punjab, Pakistan). Calls were recorded using Sony CFS 1030 S sound records (sampling rate = 48 KHz) and edited using Sound Analysis Pro (Version 1.02). software using FFT method rate 50%, data window 9.27 ms, advanced window 1.36 ms. Through editing of calls, we selected 60 (37 ♂♂, 17 ♀♀, 6 Juvenile ♂♂) good quality spectrograms for detailed analysis. Spectrograms were characterized by rapid frequency modulations …