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Prawn Resource Of Exmouth Gulf Harvest Strategy : 2021-2026 : Version 2.0, Department Of Fisheries

Fisheries Management Papers

No abstract provided.

Remembering Elaine Bachel 1946-2021, Ruthie Stearns

Nebraska Bird Review

Elaine Bachel was born June 6, 1946, in Itasca County, Minnesota, and passed away May 22, 2021, in Lincoln. She lived in Minnesota until she was ten, and it was there that she developed her love of the outdoors, especially birds. When her father passed away, Elaine, her sister and her mother moved to Omaha to live with her grandmother. She graduated from Omaha South High School and then attended college in Omaha, graduating as a registered nurse in 1968. She worked for many years for Lincoln ENT physician Dr. Charles Barton. It was in working for him and traveling …

Paul A. Johnsgard 1931-2021, Paul Johnsgard

Nebraska Bird Review

Dr Johnsgard's self-penned obituary & a photo

Incorrectly Aged, Identified And Classified: Revisiting Nebraska’S 1968 ‘Barnacle Goose’ Record, Joel G. Jorgensen, Stephen J. Brenner, W. Ross Silcock

Nebraska Bird Review

On 2 November 1968 in northeastern Otoe County, Nebraska, Milton Muncie harvested a bird (herein referred to as the 1968 specimen), subsequently identified as an immature Barnacle Goose (Branta leucopsis), from a flock of about 40 Cackling Geese (Branta hutchinsii; Cortelyou 1969). The occurrence was reported not only as the first record of a Barnacle Goose for Nebraska, but also the first record for the North American Interior and West (Cortelyou 1969). Cortelyou’s (1969) brief article also included a photograph of the mounted specimen. At the time and when subsequently reviewed by various authors, the identity of the 1968 specimen …

Paul Austin Johnsgard: Memories Of An Exceptional Naturalist, Allison E. Johnson, Charles R. Brown

Nebraska Bird Review

On May 28, 2021 the world lost one of its most dogged advocates, and we lost an amazing teacher, naturalist, and friend. Paul has told you in his own words in the previous pages where he was from, where he was educated, about the immense number of scholarly articles and books he published, and about his beautiful art that brought the wild to all of us (https://digitalcommons.unl.edu/zeabook/30/), but we wanted to share the person we knew Paul to be, and to relive some of our memories of him. While Paul’s body of work will continue to impact the ornithological and …

Spring Field Report, March - May 2021, W. Ross Silcock

Nebraska Bird Review

A total of 163 observers contributed to this report. This spring several observers were quite active statewide, resulting in interesting discoveries among waterfowl hybrids, subspecies distributions, breeding and spatial range expansions, and more than usual early and late dates and high counts, not to mention a couple of extreme rarities. Speaking of BONO, readers will note a new section under “Species Accounts” that deals with hybrids reported in Nebraska. A surprising 47 are listed, 26 of these waterfowl. If you like waterfowl hybrids, read on! This report deals with 14 such hybrids, four newly documented for the state. Several non-waterfowl …

The Nebraska Bird Review, Volume 89 June 2021 Number 2

Nebraska Bird Review

Spring Field Report, March - May 2021, by W. Ross Silcock … 50

Incorrectly Aged, Identified and Classified: Revisiting Nebraska’s 1968 ‘Barnacle Goose’ Record, by Joel G. Jorgensen, Stephen J. Brenner, and W. Ross Silcock …80

Paul A. Johnsgard by Paul A. Johnsgard … 92

Paul Austin Johnsgard: Memories of an Exceptional Naturalist by Allison E. Johnson and Charles R. Brown …94

Breeding Status of Louisiana Waterthrush (Parkesia motacilla) in the Niobrara River Valley, North-central Nebraska by W. Ross Silcock … 97

Remembering Elaine Bachel 1946-2021, by Ruthie Stearns …101

Subscription and Organization Information …103

Structure Of Chimpanzee Gut Microbiomes Across Tropical Africa, Clifton P. Bueno De Mesquita, Lauren M. Nichols, Matthew J. Gebert, Caihong Vanderburgh, Gaëlle Bocksberger, Jack D. Lester, Ammie K. Kalan, Paula Dieguez, Maureen S. Mccarthy, Anthony Agbor, Paula Álvarez Varona, Ayuk Emmanuel Ayimisin, Mattia Bessone, Rebecca Chancellor, Heather Cohen, Charlotte Coupland, Tobias Deschner, Villard Ebot Egbe, Annemarie Goedmakers, Anne-Céline Granjon, Cyril C. Grueter, Josephine Head, R. Adriana Hernandez-Aguilar, Kathryn J. Jeffery, Sorrel Jones, Parag Kadam, Michael Kaiser, Juan Lapuente, Bradley Larson, Sergio Marrocoli, David Morgan, Badru Mugerwa, Felix Mulindahabi, Emily Neil, Protais Niyigaba, Liliana Pacheco, Alex K. Piel, Martha M. Robbins, Aaron S. Rundus, Crickette M. Sanz, Lilah Sciaky, Douglas Sheil, Volker Sommer, Fiona A. Stewart, Els Ton, Joost Van Schijndel, Virginie Vergnes, Erin G. Wessling, Roman M. Wittig, Yisa Ginath Yuh, Kyle Yurkiw, Klaus Zuberbühler, Jan F. Gogarten, Anna Heintz-Buschart, Alexandra N. Muellner-Riehl, Christophe Boesch, Hjalmar S. Kühl, Noah Fierer, Mimi Arandjelovic, Robert R. Dunn

Psychology Faculty Publications

Understanding variation in host-associated microbial communities is important given the relevance of microbiomes to host physiology and health. Using 560 fecal samples collected from wild chimpanzees (Pan troglodytes) across their range, we assessed how geography, genetics, climate, vegetation, and diet relate to gut microbial community structure (prokaryotes, eukaryotic parasites) at multiple spatial scales. We observed a high degree of regional specificity in the microbiome composition, which was associated with host genetics, available plant foods, and potentially with cultural differences in tool use, which affect diet. Genetic differences drove community composition at large scales, while vegetation and potentially tool use drove …

Predicting Range Shifts Of African Apes Under Global Change Scenarios, Joana S. Carvalho, Bruce Graham, Gaeelle Bocksberger, Fiona Maisels, Elizabeth A. Williamson, Serge Wich, Tenekwetche Sop, Bala Amarasekaran, Benjamin Barca, Abdulai Barrie, Richard A. Bergl, Christophe Boesch, Hedwige Boesch, Terry M. Brncic, Bartelijntje Buys, Rebecca Chancellor, Emmanuel Danquah, Osiris A. Doumbe, Stephane Y. Le-Duc, Anh Galat-Luong, Jessica Ganas, Sylvain Gatti, Andrea Ghiurghi, Annemarie Goedmakers, Nicolas Granier, Dismas Hakizimana, Barbara Haurez, Josephine Head, Ilka Herbinger, Annika Hillers, Sorrel Jones, Jessica Junker, Nakedi Maputla, Eno-Nku Manasseh, Maureen S. Mccarthy, Mary Molokwu-Odozi, Bethan J. Morgan, Yoshihiro Nakashima, Paul K. N'Goran, Stuart Nixon, Louis Nkembi, Emmanuelle Normand, Laurent D. Z. Nzooh, Sarah H. Olson, Leon Payne, Charles-Albert Petre, Alex K. Piel, Lilian Pintea, Andrew J. Plumptre, Aaron S. Rundus, Adeline Serckx, Fiona A. Stewart, Jacqueline Sunderland-Groves, Nikki Tagg, Angelique Todd, Ashley Vosper, Jose F. C. Wenceslau, Erin G. Wessling, Jacob Willie, Hjalmar S. Kuehl

Anthropology & Sociology Faculty Publications

Aim: Modelling African great ape distribution has until now focused on current or past conditions, while future scenarios remain scarcely explored. Using an ensemble forecasting approach, we predicted changes in taxon-specific distribution under future scenarios of climate, land use and human populations for (1) areas outside protected areas (PAs) only (assuming complete management effectiveness of PAs), (2) the entire study region and (3) interspecies range overlap. Location: Tropical Africa. Methods: We compiled occurrence data (n = 5,203) on African apes from the IUCN A.P.E.S. database and extracted relevant climate-, habitat- and human-related predictors representing current and future (2050) conditions to …

The Status Of Spotted Seatrout (Cynoscion Nebulosus) As A Technologically Feasible Species For U.S. Marine Aquaculture, Reginald Blaylock, Eric Saillant, Angelos Apeitos, David Abrego, Paul Cason, Robert Vega

Faculty Publications

Culture models and facilities for large-scale, commercial production of popular Gulf of Mexico species are unavailable. The spotted seatrout (Cynoscion nebulosus) is one of the most popular recreational fishes in the Gulf of Mexico. Seatrout culture techniques were adapted from red drum (Sciaenops ocellatus) protocols developed in the 1970s. Broodstock husbandry, spawning, and extensive pond rearing techniques using fertilized and bloomed brackish ponds were well-established by the 1980s. By 2018, approximately 80 million 25–30-day old seatrout had been produced, mainly for stock enhancement. Cannibalism and poor nutrition hindered intensive tank culture. Between 2005 and 2015, an …

First Data On Aquaculture Of The Tripletail, Lobotes Surinamensis, A Promising Candidate Species For U.S. Marine Aquaculture, Eric Saillant, Nicholas Adams, Jason T. Lemus, James S. Franks, Yonathan Zohar, John Stubblefield, Christopher Manley

Faculty Publications

The Tripletail, Lobotes surinamensis, is a warm-water pelagic fish that is increasingly targeted by U.S. anglers. The superior quality of Tripletail flesh coupled with the lack of domestic commercial fisheries stimulated interests to develop aquaculture of this species. In this work, photo-thermal conditioning of captive-held broodstocks promoted maturation in females, but spontaneous spawning was not observed. GnRHa slow-release implants induced ovulation in late vitellogenic females but fertility remained below 10% when GnRHa was administered alone. However, spawns with high fertility (up to 85%) were obtained when a dopamine antagonist was administered in conjunction with GnRHa implants indicating dopamine inhibition …

Comparing Management Programs To Reduce Red–Tailed Hawk Collisions With Aircraft, Brian Washburn, Craig K. Pullins, Travis L. Guerrant, Gregory J. Martinelli, Scott F. Beckerman

United States Department of Agriculture Wildlife Services: Staff Publications

Wildlife-aircraft collisions (wildlife strikes) pose a serious safety risk to aircraft. Raptors (i.e., hawks and owls) are one of the most frequently struck guilds of birds within North America. Although raptors (most notably red-tailed hawks [Buteo jamaicensis]) are commonly managed at most airports and military bases, there is no scientific information available regarding comparisons of the efficacy of raptor management programs for reducing raptor-aircraft collisions. Therefore, we conducted a study to examine the efficacy of 2 raptor hazard management programs implemented at Chicago's O'Hare International Airport (ORD). The first raptor management program (Phase I) occurred during January 2010–June 2013 and …

James Davidson Fawcett (1933–2020): Imbibing With The Kiwi, Louis A. Somma

Papers in Herpetology

An obituary and summary of the life of James D. Fawcett (1933-2020), herpetologist and instructor and professor of Biology at University of Nebraska at Omaha, 1972-2015. Includes bibliography of his works, list of master's theses chaired, and recollections of former students.

Dynamic Observers For Unknown Populations, Chris Guiver, Nathan Poppelreiter, Richard Rebarber, Brigitte Tenhumberg, Stuart Townley

Brigitte Tenhumberg Papers

Dynamic observers are considered in the context of structuredpopulation modeling and management. Roughly, observers combine a known measured variable of some process with a model of that process to asymptotically reconstruct the unknown state variable of the model. We investigate the potential use of observers for reconstructing population distributions described by density-independent (linear) models and a class of density-dependent (nonlinear) models. In both the density-dependent and -independent cases, we show, in several ecologically reasonable circumstances, that there is a natural, optimal construction of these observers. Further, we describe the robustness these observers exhibit with respect to disturbances and uncertainty in …

Alfaxalone Successfully Immobilizes Small Indian Mongooses (Urva Auropunctata): A Field Report, Caroline C. Sauvé, Yves Rondenay, Are R. Berentsen, Mel J. Rivera-Rodriguez, Patrick A. Leighton

United States Department of Agriculture Wildlife Services: Staff Publications

We investigated intramuscular administration of alfaxalone (5.3–10.0 mg/kg) as an immobilizing agent in free-ranging small Indian mongooses (Urva auropunctata) on the island of St. Kitts, West Indies. From 5–11 January 2020, we successfully immobilized 10 of 11 mongooses. Alfaxalone provided rapid onset (median = 3 min) of immobilization. Mean duration of immobilization was 16.8 ± 3 min. Mean recovery time was 5.6 ± 1 min. There was no effect of dose administered on induction, anesthesia, or recovery times at the dose range used. We concluded that alfaxalone represents an effective alternative to dissociative agents for the immobilization of free-ranging mongooses. …

Strategic Testing Approaches For Targeted Disease Monitoring Can Be Used To Inform Pandemic Decision-Making, James D. Nichols, Tiffany L. Bogich, Emily Howerton, Ottar N. Bjørnstad, Rebecca K. Borchering, Matthew Ferrari, Murali Haran, Christopher Jewell, Kim M. Pepin, William J.M. Probert, Juliet R.C. Pulliam, Michael C. Runge, Michael Tildesley, Cecile Viboud, Katriona Shea

United States Department of Agriculture Wildlife Services: Staff Publications

More than 1.6 million Servere Acute Respiratory Syndrome Cronovirus 2(SARS-COV-2)tests were administered daily in the United States at the peak of the epidemic, with a significant focus on individual treatment. Here, we show that objective-driven, strategic sampling designs and analyses can maximize information gain at the population level, which is necessary to increase situational awareness and predict, prepare for, and respond to a pandemic, while also continuing to inform individual treatment. By focusing on specific objectives such as individual treatment or disease prediction and control (e.g., via the collection of population- level statistics to inform lockdown measures or vaccine rollout) …

An Evaluation Of Body-Grip Trap Trigger Configurations For Reducing River Otter Take Incidental To Beaver Trapping, Alec J. Sundelius, Nicholas Forman, Nathan M. Roberts, Shawn T. Rossler, David B. Ruid, Robert C. Willging

United States Department of Agriculture Wildlife Services: Staff Publications

River otter (Lontra canadensis) populations in North America have been the focus of significant restoration efforts. Wildlife management agencies, concerned about the unintentional take of river otters incidental to beaver (Castor canadensis) trapping, may recommend techniques to avoid capturing river otters. River otter avoidance techniques that are ineffective or diminish trap performance for beavers are undesirable. We conducted a field evaluation in 2015 and 2016 in Wisconsin to assess how two trigger configurations (offset and center) on body-grip traps would affect the incidental capture rate of river otters during beaver trapping. We also evaluated effects of …

A Comparison Of Intestinal Parasite Infections And Activity Budgets In Three Free-Ranging Vs. Enclosure-Housed Lemur Species (Lemur Catta, Varecia Rubra, And Eulemur Mongoz), Angela M. Achorn, Jeffrey Winking

Anthropology Faculty Publications

This study examines how range size affects intestinal parasite infections, and how such infections affect activity budgets in captive lemurs. There were no differences in parasite richness or intensity attributable to habitat type. However, there was a strong suggestion that parasite loads reduce activity levels.

Applied Research Note: Development Of A Novel Low Flow Water Monitoring System In Poultry/Agriculture Systems, J. Z. Hiltz, S. K. Orlowski, L. N. Harrington, C. W. Maynard, T. W. Tabler, N. B. Anthony

Poultry Science Faculty Publications and Presentations

Water scarcity is a global reality and with the anticipated population growth, freshwater resources will be further strained to meet both human and agriculture applications. To ensure a water sustainable and food secure future, all aspects of agriculture must become more efficient. Two strategies were explored. The first strategy was to develop a more efficient and accurate method for measuring water consumption/inputs in agriculture. To date, water measuring technology has lacked the necessary sophistication to assure accuracy and repeatability of low flow water usage. The second strategy utilized the improved water measuring technology, to develop water-efficient genetics in agricultural populations …

Research Note: Modified Serum Fluorescein Isothiocyanate Dextran (Fitc-D) Assay Procedure To Determine Intestinal Permeability In Poultry Fed Diets High In Natural Or Synthetic Pigments, Christine N. Vuong, Garrett J. Mullenix, Michael T. Kidd, Walter G. Bottje, Billy M. Hargis, Guillermo Tellez-Isaias

Poultry Science Faculty Publications and Presentations

Oral administration of fluorescein isothiocyanate dextran (FITC-d) has been used as an indicator for intestinal permeability in poultry research for several years. Under healthy conditions, tight junctions in the intestinal wall will not allow the 4-6kDa FITC-d to enter the bloodstream. Detection of FITC-d in serum (1-hour post-oral administration of FITC-d) has proven to be a reliable indicator of leaky gut syndrome (increased intestinal inflammation and disruption of tight junctions). Administration of supplementary phytobiotics in feed, particularly products with high beta-carotene levels or other pigments, has resulted in strong serum background fluorescence, which can render this assay unreliable. …

Inter- And Intracontinental Migration By The Eastern Kingbird (Tyrannus Tyrannus), Daniel H. Kim, Lucas J. Redmond, James R. Fox, Michael T. Murphy

Biology Faculty Publications and Presentations

We recovered 12 archival geolocators deployed on Eastern Kingbirds (Tyrannus tyrannus) breeding in New York (NY; n¼3, 2 with 2 years of data), Nebraska (NE; n¼6, 1 with 2 years of data), and Oregon (OR; n¼3) to describe migratory routes, timing and rates of migration, nonbreeding season distributions, and migratory connectedness. NY fall migrants migrated along the Atlantic coast to Florida, flew either nonstop across the Gulf of Mexico (GoM; 2 of 3 birds) or stopped once along the way (Cuba and Cayman Islands in different years) to land in Yucatan/Central America. Fall birds from NE and OR arrived at …

Brown Treesnake Mortality After Aerial Application Of Toxic Baits, Scott M. Goetz, Eric T. Hileman, Melia G. Nafus, Amy A. Yackel Adams, Amanda R. Bryant, Robert N. Reed, Shane R. Siers

United States Department of Agriculture Wildlife Services: Staff Publications

Quantitative evaluation of control tools for managing invasive species is necessary to assess overall effectiveness and individual variation in treatment susceptibility. Invasive brown treesnakes (Boiga irregularis) on Guam have caused severe ecological and economic effects, pose a risk of accidental introduction to other islands, and are the greatest impediment to the reestablishment of extirpated native fauna. An aerial delivery system for rodent‐based toxic baits can reduce brown treesnake abundance and heterogeneity among individuals may influence bait attraction or toxicant susceptibility. Previous baiting trials have either been simulated aerial treatments or relied on slightly different bait capsule compositions and the results …

Body And Tail Coordination In The Bluespot Salamander (Ambystoma Laterale) During Limb Regeneration, Cassandra M. Donatelli, Keegan Lutek, Keshav Gupta, Emily M. Standen

Engineering Faculty Articles and Research

Animals are incredibly good at adapting to changes in their environment, a trait envied by most roboticists. Many animals use different gaits to seamlessly transition between land and water and move through non-uniform terrains. In addition to adjusting to changes in their environment, animals can adjust their locomotion to deal with missing or regenerating limbs. Salamanders are an amphibious group of animals that can regenerate limbs, tails, and even parts of the spinal cord in some species. After the loss of a limb, the salamander successfully adjusts to constantly changing morphology as it regenerates the missing part. This quality is …

Somalibuthus Sabae Sp. N., A New Buthid Scorpion From Kenya (Scorpiones: Buthidae), František Kovařík, Laban Njoroge

Euscorpius

The poorly known buthid genus Somalibuthus Kovařík, 1998, is recorded for the first time from Kenya, with the description of a new species, S. sabae sp. n., from Kiwayu Island in the Kiunga Marine National Reserve. Based on a detailed study of the new materials, a revised diagnosis is given for the genus. Several generic characters suggest affinities with three other genera of small buthids found in the Horn of Africa: Neobuthus Hirst, 1911, Gint Kovařík, Lowe, Plíšková et Šťáhlavský, 2013, and Lanzatus Kovařík, 1998.

Successful Atac-Seq From Snap-Frozen Equine Tissues, Sichong Peng, Rebecca Bellone, Jessica Lynn Petersen, Theodore S. Kalbfleisch, Carrie J. Finno

Department of Animal Science: Faculty Publications

An assay for transposase-accessible chromatin with high-throughput sequencing (ATAC-seq) has become an increasingly popular method to assess genome-wide chromatin accessibility in isolated nuclei from fresh tissues. However, many biobanks contain only snap-frozen tissue samples. While ATAC-seq has been applied to frozen brain tissues in human, its applicability in a wide variety of tissues in horse remains unclear. The Functional Annotation of Animal Genome (FAANG) project is an international collaboration aimed to provide high quality functional annotation of animal genomes. The equine FAANG initiative has generated a biobank of over 80 tissues from two reference female animals and experiments to begin …

Increased Connectivity And Depth Improve The Effectiveness Of Marine Reserves, Jordan Goetze, Shaun K. Wilson, Ben Radford, Rebecca Fisher, Tim Langlois, Jacquomo Monk, Nathan A. Knott, Hamish A. Malcolm, Leanne M. Currey-Randall, Daniel Ierodiaconou, David Harasti, Neville Barrett, Russell C. Babcock, Nestor E. Bosch, Danny Brock, Joachim Claudet, David Fairclough, Stephen J. Newman, Michael J. Travers, Corey Wakefield

Fisheries Research Articles

Marine reserves are a key tool for the conservation of marine biodiversity, yet only ~2.5% of the world's oceans are protected. The integration of marine reserves into connected networks representing all habitats has been encouraged by international agreements, yet the benefits of this design has not been tested empirically. Australia has one of the largest systems of marine reserves, providing a rare opportunity to assess how connectivity influences conservation success. An Australia-wide dataset was collected using baited remote underwater video systems deployed across a depth range from 0 to 100 m to assess the effectiveness of marine reserves for protecting …

Some Fundamentals Of Marketing Meat Goats, Angela Mckenzie-Jakes

Professional Agricultural Workers Journal

Over the last couple of decades, the demand for goat meat has risen in the U.S. However, the current supply of domestic goats does not meet the demand. In fact, the increase in demand is the result of the growth in ethnic populations in the U.S. Consequently, small producers are raising goats as a source of income. Thus, they must become familiar with ethnic holidays or festivals, understand marketing, and the importance of body condition scoring and selection criteria in order to increase returns from the sale of their goats. The objectives of this paper were to discuss the U.S. …

Landscape Genetics Of American Beaver In Coastal Oregon, Clinton W. Epps, Vanessa M. Petro, Tyler G. Creech, Rachel S. Crowhurst, Matthew J. Weldy, Jimmy D. Taylor

United States Department of Agriculture Wildlife Services: Staff Publications

American beaver (Castor canadensis) have been translocated for population restoration, reduction of human‐wildlife conflict, and enhancement of ecosystem function. Yet few studies have assessed dispersal of beaver, making it difficult to determine at what scale translocations are appropriate. Genetic studies can provide inferences about gene flow, and thus dispersal. We used a landscape genetic approach to evaluate whether landscape features influenced gene flow among beaver in the Coast Range of western Oregon, USA, using samples collected April–September 2014. We collected genetic samples from live‐captured (n=232), road‐killed (n=2) and trapper‐provided (n=58) tissue samples and genotyped them at 10 microsatellite loci. We …

Incorporating Life Into Living Shorelines: Can Gulf Ribbed Mussels Reduce Shoreline Erosion And Enhance Restoration Practices?, Jordan Logarbo

LSU Master's Theses

The gulf ribbed mussel (Geukensia granosissima) exists throughout the Gulf of Mexico and influences biotic and abiotic environmental attributes as an ecosystem engineer. Ribbed mussels are an important component of marsh ecosystems providing services including filtering particulate matter, depositing and transforming nutrients in the system, increasing soil strength via byssal threads and providing structure via their shells.

The spatial distribution of mussels along the marsh edge of Sister Lake, LA was investigated via a broad survey of 150 sites, in relation to elevation, exposure and vegetation percent cover. This survey was followed by a second survey at a …

Effects Of Environmental Change On Ancestral Pueblo Fishing In The Middle Rio Grande, Jonathan William Dombrosky

Anthropology ETDs

It has long been assumed that fishes were unimportant in the diet of past Pueblo people in the U.S. Southwest. Yet, small numbers of fish remains are consistently recovered from Late pre-Hispanic/Early Historic archaeological sites in the Middle Rio Grande of New Mexico. The end of drought conditions may have impacted food choice and fishing decisions during this time. I use behavioral ecology to understand how fishing could have been an optimal food-getting strategy for Ancestral Pueblo farmers. Stable isotope analysis offers a way to account for environmental change. I provide a refined ¹³C Suess correction model to support …