Digital Commons Network^™

Sex-Specific Effects Of Hatching Order On Nestling Baseline Corticosterone In A Wild Songbird, Madison A. Rittinger, Rachel M. Bowden, Logan A. Sauers, Ryan T. Paitz, Christine J. Poppe, Charles F. Thompson, Scott K. Sakaluk

Faculty Publications – Biological Sciences

Variation in nestling growth and survival is often influenced by hatching order, with first-hatched offspring having an advantage over later-hatched younger siblings. In house wrens (Troglodytes aedon), this effect of hatching order is especially evident in asynchronously hatched broods and can lead to sex-specific differences in the size and condition of nestlings. Females appear to allocate the sex of their offspring across the laying order to capitalize on these differences. We hypothesized that levels of circulating corticosterone, the primary metabolic hormone in birds, mediates these sex-specific effects in nestlings. We predicted that: i) baseline levels of corticosterone in nestlings should …

Understanding Continent-Wide Variation In Vulture Ranging Behavior To Assess Feasibility Of Vulture Safe Zones In Africa: Challenges And Possibilities, Adam Kane, Ara Monadjem, H. K.Ortwin Aschenborn, Keith Bildstein, André Botha, Claire Bracebridge, Evan R. Buechley, Ralph Buij, John P. Davies, Maria Diekmann, Colleen T. Downs, Nina Farwig, Toby Galligan, Gregory Kaltenecker, Chris Kelly, Ryno Kemp, Holger Kolberg, Monique L. Mackenzie, John Mendelsohn, Msafiri Mgumba, Ran Nathan, Aaron Nicholas, Darcy Ogada, Morgan Pfeiffer, W. Louis Phipps, Matteuns D. Pretorius, Sascha Rösner, Dana G. Schabo, Gabriel Lita Shatumbu, Orr Spiegel, Lindy J. Thompson, Jan A. Venter, Munir Virani, Kerri Wolter, Corinne J. Kendall

United States Department of Agriculture Wildlife Services: Staff Publications

Protected areas are intended as tools in reducing threats to wildlife and preserving habitat for their long-term population persistence. Studies on ranging behavior provide insight into the utility of protected areas. Vultures are one of the fastest declining groups of birds globally and are popular subjects for telemetry studies, but continent-wide studies are lacking. To address how vultures use space and identify the areas and location of possible vulture safe zones, we assess home range size and their overlap with protected areas by species, age, breeding status, season, and region using a large continent-wide telemetry datasets that includes 163 individuals …

European Starling Use Of Nest Boxes Relative To Human Disturbance, Bradley Blackwell, Bruce N. Buckingham, Morgan B. Pfeiffer

United States Department of Agriculture Wildlife Services: Staff Publications

gars and to engine and flight surfaces of moored aircraft. We questioned whether consistent removal of nest material would negatively affect use of a nest site, measured by a reduction in material accumulation. We conducted our study on a 2,200-ha site in Erie County, Ohio, USA (41° 22’ N, 82° 41’ W), from April 15 through June 2, 2020. We used 120 wooden nest boxes on utility poles, protected by an aluminum predator guard below the box. Our treatments included (1) twice weekly, repeated nest material removal (RMR; n = 40 nest boxes); (2) complete nest removal, but only after …

Sensitivity Of A Lamp Assay For Detection Of The Dinoflagellate Amyloodinium Ocellatum In Simulated Field Conditions And Freeze Tolerance Of The Parasite, Robert Gonzales

Master's Theses

The obligate parasitic dinoflagellate Amyloodinium ocellatum causes amyloodiniosis in warm water marine fishes. The prolific parasite, which has a direct, three-stage life cycle, is highly infectious and can cause heavy losses in aquaculture. Prevention, biosecurity, and early detection are vital for control. In this work, microscopy and a loop-mediated isothermal amplification (LAMP) assay were compared for early diagnosis of A. ocellatum in cultured stocks, and the freeze tolerance of tomonts was assessed to determine if frozen wild fish used as fish food can serve as a potential vector for the parasite.

The lowest dinospore concentration that could be detected by …

The Effects Of Dietary Interventions On Adverse Outcomes In Obese, Preeclamptic-Like Bph/5 Female Mice, Morgan Alston

Honors Capstones

No abstract provided.

Effects Of Pine Straw As A Dietary Supplement For Internal Parasite Control In Pasture Raised Meat Goats, Landry M. Higgins

Honors Capstones

No abstract provided.

Assessment Of The Effect Of Acepromazine On Insulin Tolerance Tests (Itt) In Dairy Heifers, Mya Catherine Orantes

Honors Capstones

No abstract provided.

Ecological Studies Of Wolves On Isle Royale Annual Report 2021-2022, Sarah R. Hoy, Rolf O. Peterson, John A. Vucetich

Ecological Studies of Wolves on Isle Royale

Annual Report 2021-2022

Good Cop/Bad Cop: A Comparative Analysis Of Affiliative And Aggressive Behaviors By Adult Female And Male Olive Baboons With Infants At Randilen Wildlife Management Area, Tanzania, Jesse Elop

Independent Study Project (ISP) Collection

This study investigated the infant-directed behaviors of adult male and female olive baboons in Randilen Wildlife Management Area in April of 2022. The objectives were 1) To determine the difference between olive baboon males and females in frequency and duration of listed behaviors towards infants; 2) To classify the interactions of adult male and adult female olive baboons with infants as either primarily affiliative or primarily aggressive; 3) To determine the frequency of selected behaviors at different reproductive phases (lactation, estrus, neutral, indeterminant) amongst female olive baboons towards infants. A single baboon troop in Randilen Wildlife Management Area was observed …

Improving The Longevity Of Dairy Cattle: An Important Initiative For The Swiss Dairy Industry, Frances Mcmillan

Independent Study Project (ISP) Collection

Swiss dairy cattle rarely live a productive life of longer than 5 years- sometimes even less, and therefore fail to reach their maximum lactation potential. They are often prematurely culled due to udder diseases, fertility problems, lameness, or the farmer’s need to make room for a calving heifer. However, farmers rarely record the real reasons for removing a cow from the herd, due to a sense of pressure and obligation to produce and a lack of universal standards regarding longevity to assist in this decision. This is a monumental problem, from both an environmental and animal welfare point of view, …

Sacred Scavengers: Vulture Conservation In Nepal, Hans Nedde

Independent Study Project (ISP) Collection

In the 1990s, a veterinary drug used to treat pain and disease in cattle nearly brought the nine vulture species of Nepal to extinction. In a span of 15 years, over 97% of vultures in Nepal perished. For the past 20 years, governments, organizations, and communities have been working together to save these vital scavengers from vanishing. From the lowlands to the Himalayas, vultures have been interacting with the environment and humans for millennia. This study explores the role that vultures play both ecologically and culturally in Nepal. It investigates vultures as a crucial ecological influence and how human action …

Comparing Amphibian Species Diversity And Abundance In Natural Forest And Cacao Agroforest At Finca La Magnita, Changuinola, Bocas Del Toro, Panamá, Lake Barrett

Independent Study Project (ISP) Collection

Amphibians are currently undergoing rapid and drastic biodiversity loss worldwide, largely due to the disease Chytridiomycosis. Because of this, efforts to conserve amphibian biodiversity are urgent and have been given increasing importance. However, studies investigating the effectiveness of agroforestry systems, a commonly used agricultural method in which trees and other elements of forests are retained on land used for agriculture, for amphibian conservation are uncommon. As a result, the capacity of agroforests to serve as a tool for amphibian conservation is unclear. To determine if agroforests can serve as a habitat for amphibians and a tool for their conservation, this …

The Impact Of Plant Cell Wall Lignin On Energy Utilization In Lactating Jersey Cows, Jason D. Stypinski

Department of Animal Science: Dissertations, Theses, and Student Research

Fiber from forages comprises a significant proportion of dairy cattle rations and by extension, it contributes largely to the energy concentration of the diet. While the proportion of fiber in the diet is important, the composition of fiber is probably more important as the different constituents of this fraction vary in their contributions to the nutritive value of the feed. Lignin has been described as an important factor limiting the digestion of NDF, reducing intake, and compromising milk production. Although lignin’s effects on these responses have been well characterized, the literature lacks data on the use of indirect calorimetry to …

Annotating Gene Expression And Regulatory Elements In Tissues From Healthy Thoroughbred Horses And Identifying Candidate Mutations Associated With Perosomus Elumbis In An Angus Calf, Alexa Mckenna Barber

Department of Animal Science: Dissertations, Theses, and Student Research

Genome annotation has a direct impact on the success of genomic studies. Transcriptome analyses and chromatin immunoprecipitation and sequencing (ChIP-seq) have been used to functionally annotate genomes. These methods can identify protein-coding genes, non-coding transcripts, and cis-regulatory elements across the genome. The primary objective of the first study was to functionally annotate the equine genome through the assessment of nine tissues: adipose, brain, heart, lamina, liver, lung, skeletal, muscle, testis, and ovary. In the first project, 150 bp, paired-end RNA sequencing (RNA-seq) libraries were generated in stallion tissues and compared to previously generated mare RNA-seq libraries to quantify variation in …

Effects Of Temperature And Plant And Animal Diets On Metabolic Rate In The Juvenile Red Eared Slider (Trachemys Scripta Elegans), Taylor Macdonald, Sarah Bouchard

Undergraduate Honors Thesis Projects

Specific dynamic action (SDA) is the energy expended during ingestion, digestion, absorption, and assimilation of a meal, and is influenced by meal (type, size, composition, and temperature) and environmental temperature. Understanding the effect of meal type and environmental temperature on SDA in turtles is important in describing how T. s. elegans may acclimate with changing environmental temperatures. In this study, we conducted feeding trials in which we fed juvenile T. s. elegans duckweed and mealworm diets at 25°C and 30°C. We measured the rate of oxygen consumption as a proxy for metabolic rate after feeding for four 30 minute consecutive …

Ileal Microbial Composition In Genetically Distinct Chicken Lines Reared Under Normal Or High Ambient Temperatures, Nima K. Emami, Lori L. Schreier, Elizabeth Greene, Travis Tabler, Sara K. Orlowski, Nicholas B. Anthony, Monika Proszkowiec‑Weglarz, Sami Dridi

Poultry Science Faculty Publications and Presentations

Background: Heat stress (HS) has negative effects on poultry productivity, health and welfare resulting in economic losses. Broiler chickens are particularly susceptible to HS due to their high metabolic rate and rapid growth. The com‑ mensal intestinal bacterial populations have an important physiological role in the host and could ameliorate the negative effect of HS on the host. Thus, the aim of this study was to compare changes in the ileal (IL) microbiota in four different broiler lines during HS.

Results: Day‑old broiler chicks from Giant Jungle Fowl (JF), Athens Canadian Random Bred (ACRB), 1995 Random Bred (L1995), and Modern …

Quantitative Morphometric, Physiological, And Metabolic Characteristics Of Chickens And Mallards For Physiologically Based Kinetic Model Development, Colin G. Scanes, Johannes Witt, Stephan Schaller, Vanessa Baier, Audrey J. Bone, Thomas G. Preuss, David Heckmann

Poultry Science Faculty Publications and Presentations

Physiologically based kinetic (PBK) models are a promising tool for xenobiotic environmental risk assessment that could reduce animal testing by predicting in vivo exposure. PBK models for birds could further our understanding of species-specific sensitivities to xenobiotics, but would require species-specific parameterization. To this end, we summarize multiple major morphometric and physiological characteristics in chickens, particularly laying hens (Gallus gallus) and mallards (Anas platyrhynchos) in a meta-analysis of published data. Where such data did not exist, data are substituted from domesticated ducks (Anas platyrhynchos) and, in their absence, from chickens. The distribution of water …

Quantitative Comparison Of Avian And Mammalian Physiologies For Parameterization Of Physiologically Based Kinetic Models, Colin G. Scanes, Johannes Witt, Markus Ebeling, Stephan Schaller, Vanessa Baier, Audrey J. Bone, Thomas G. Preuss, David Heckmann

Poultry Science Faculty Publications and Presentations

Physiologically based kinetic (PBK) models facilitate chemical risk assessment by predicting in vivo exposure while reducing the need for animal testing. PBK models for mammals have seen significant progress, which has yet to be achieved for avian systems. Here, we quantitatively compare physiological, metabolic and anatomical characteristics between birds and mammals, with the aim of facilitating bird PBK model development. For some characteristics, there is considerable complementarity between avian and mammalian species with identical values for the following: blood hemoglobin and hemoglobin concentrations per unit erythrocyte volume together with relative weights of the liver, heart, and lungs. There are also …

Focused Review: The Role Of Drug Combinations For The Control Of Coccidiosis In Commercially Reared Chickens, H. David Chapman, Thilakar Rathinam

Poultry Science Faculty Publications and Presentations

A survey of drug combinations employed by the poultry industry indicates that they have played an important role in the control of coccidiosis in chickens. The mode of action of their component drugs is described. Advantages that accrue from their use may include a reduction in potential toxicity, a broadening of their spectrum of activity against different species of Eimeria, activity against different stages of the life cycle, and improved efficacy due to synergism between component drugs. Integration of management procedures involving rotation of drug combinations with vaccination is desirable because this has been shown to result in a restoration …

Avian Neuropeptide Y: Beyond Feed Intake Regulation, Elizabeth S. Greene, Nedra Abdelli, Jalila S. Dridi, Sami Dridi

Poultry Science Faculty Publications and Presentations

Neuropeptide Y (NPY) is one of the most abundant and ubiquitously expressed neuropeptides in both the central and peripheral nervous systems, and its regulatory effects on feed intake and appetite- have been extensively studied in a wide variety of animals, including mammalian and non-mammalian species. Indeed, NPY has been shown to be involved in the regulation of feed intake and energy homeostasis by exerting stimulatory effects on appetite and feeding behavior in several species including chickens, rabbits, rats and mouse. More recent studies have shown that this neuropeptide and its receptors are expressed in various peripheral tissues, including the thyroid, …

Monitoring The Immune Status Of Calves At The Agricultural Education Center, Jared Wallen

Honors Theses

Each year at the Andrews University Agriculture Education Center calves born to the resident cows and calves that are purchased are raised by the students in the animal science program. In each of the previous two years that calves have been raised, morbidities and mortalities have been observed. In order to prevent any calves from dying and reduce the rate of illness this research project was designed to monitor the calves’ immune status. By doing weekly blood draws, the total serum protein levels were determined and used as a standard for their health. Body temperature, food and water intake, and …

Evaluation Relativity Variation And Some Minerals Concentration During Lactation Stage Of Syrian Mountains Goat Milk Under Grazing System, تقدير التغيرات النسبية ومستوى تراكيز بعض المعادن خلال مرحلة إنتاج حليب الماعز الجبلي السوري تحت نظام الرعاية السرحي, Osama Diab, Samuel Mossa, Shehadeh Qaskos

Arab Journal of Arid Environments المجلة العربية للبيئات الجافة

The aim of this study was to investigate the effect of lactation stage on chemical composition and some minerals concentration of Syrian mountains Goat milk using grazing system in Al-Quneitera area (Syria) in year 2013. Twenty mountains Syrian goats were used to evaluate milk production and composition (fat, protein, lactose, and non-fat solids) and some minerals concentration (Ca, P, Na, K, Cu, Mg, Mn, Fe, Zn, cl) during lactation. Using SPSS program, data were analyzed by ANOVA with repeated measures. Daily milk yield was 1473.1 ± 297.42 g/head, while the total milk was 342.02 ± 135.6 Kg/head. The results of …

Estimation Of Growth Curve Prediction Equation Parameters For Weights Of Shami Camel Before Mature/ Syria, تقدير معالم دالة تنبؤ منحنى النمو لأوزان الإبل الشامية قبل النضج في سورية, Shadi Faris, Khaled Alnajjar, Ali Dib, Abdulla Nouh

Arab Journal of Arid Environments المجلة العربية للبيئات الجافة

The aim of this study was to estimate the growth curve prediction equation for weights from birth to four years old of Shami camel.

This study was carried out on 358 records of Shami camel, during the period from 1996 to 2012 at Dier Alhajr station for camel research, animal wealth research administration, General Commission Scientific Agriculture Research, rural Damascus (Syria).

The results showed high values of coefficient determinates (0.97-0.98), while standard errors values ranged between (27.26-34.13), and residual values ranged between (0.32-107.72), for each linear, quadratic and cubic equations. The values were fittest at linear regression equation for males, …

A Statistical Method For Quantifying Animal Interaction; Combining Time Geography And Simulation, Zachary J. Smith

USF Tampa Graduate Theses and Dissertations

Dynamic interaction (DI) describes the synchronous interaction of one or more individual animals over time. Current methods to quantify DI from tracking data are lacking. They typically require synchronized tracking data which limits their applicability to most studies. They also often do not have built-in tests of significance to evaluate interaction, and if so, rely on random walk models that lack biological realism. This research aimed to develop and evaluate a new way of measuring animal interaction that overcomes these limitations. The goal was to create a statistical method for quantifying and evaluating interaction that is relevant across computational, behavioural, …

High-Frequency Accelerometer Recording Of Key Predatory Behaviors In Vipers: Validation And Case Study With Timber Rattlesnakes (Crotalus Horridus), Morgan L. Thompson, Richard H. Adams, Anna Tipton, Dominic L. Desantis

Graduate Research Showcase

High-frequency accelerometer recording of key predatory behaviors in vipers: validation and case study with Timber Rattlesnakes (Crotalus horridus)

Morgan Thompson, Richard H. Adams, Anna F. Tipton, and Dominic L. DeSantis

Tri-axial accelerometers (ACTs) are becoming increasingly common in studies of animal behavior wherein direct observation of subjects in nature is constrained or impossible. ACTs are small (< 1 g) piezo-electric (spring-like) sensors that measure three-dimensional acceleration (upward, downward, and side-to-side) derived from subject motion. When leveraged with advanced machine learning techniques, these data can enable precise automated classification of a wide range of movement-mediated behaviors. Until recently, ACTs were largely reserved for larger-bodied organisms or those most amenable to the temporary external attachment of devices. Ongoing ACT miniaturization has now expanded the breadth of organisms amenable to these methods. This project aims to expand on a recently developed framework for ACT monitoring in wild-ranging snakes, a group that has been mostly overlooked in biologging applications. We are currently conducting extensive captive validation trials for robust model training and testing to enable classification of predatory behaviors, including striking and ingestion of prey items, in Timber Rattlesnakes (Crotalus horridus). Following captive validation, we will translate this method to the field with a population of C. horridus in the lower Piedmont of middle Georgia to evaluate the efficacy of externally attached ACTs for remote and continuous monitoring of …

The Design, Construction, And Testing Of A Recombinant Dna Vaccine For Brucella Abortus And Brucella Melitensis, Stephanie Lynn Korle

LSU Doctoral Dissertations

Brucella spp. are a bacterium that cause brucellosis, a zoonotic disease, which is commonly seen in cattle, sheep, goats, swine, and canines. Brucellosis is a problem worldwide, although it is eradicated in some countries (Garin-Bastuji et al. 1998). The reason for designing recombinant DNA (rDNA) vaccines opposed to utilizing the live-attenuated vaccines on the market is that they cannot be given to pregnant animals without potentially causing abortion, while an rDNA vaccine should be safe for pregnant animals since it does not contain viable bacteria. Also, there are no serological tests that can accurately distinguish between an animal vaccinated …

Transcriptomic Analysis Of Liver Indicates Novel Vaccine To Porcine Reproductive And Respiratory Virus Promotes Homeostasis In T-Cell And Inflammatory Immune Responses Compared To A Commercial Vaccine In Pigs, Damarius S. Fleming, Laura C. Miller, Jiuyi Li, Albert Van Geelen, Yongming Sang

Agricultural and Environmental Sciences Faculty Research

One of the largest impediments for commercial swine production is the presence of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV), a devastating RNA viral infection that is responsible for over $1 billion in loss in the U.S. annually. The challenge with combating PRRSV is a combination of the effect of an extraordinary rate of mutation, the ability to infect macrophages, and subversion of host immune response through a series of actions leading to both immunomodulation and immune evasion. Currently there are a handful of commercial vaccines on the market that have been shown to be effective against homologous infections, but …

Stepping-Stones And Mediators Of Pandemic Expansion: A Context For Humans As Ecological Super-Spreaders, Eric P. Hoberg, Walter A. Boeger, Daniel R. Brooks, Valeria Trivellone, Salvatore J. Agosta

MANTER: Journal of Parasite Biodiversity

Humans represent ecological super-spreaders in the dissemination and introduction of pathogens. These processes, consistent with the dynamics of the Stockholm paradigm, are exemplified in the origin and globalized distributions of SARS-CoV-2 since initial recognition in central Asia during 2019 and 2020. SARS-like viruses are not widespread in mammals but appear widespread in chiropterans. Bats are isolated ecologically from most other assemblages of mammals in terrestrial systems. Humans may be the stepping-stone hosts for broad global dissemination and wider infection (given the opportunity) among diverse assemblages of mammals in which host and viral capacity are compatible. Human globalization mediated insertion in …

Estimation Of Chromium In Soil-Plant-Animal Continuum: A Case Study In Ruminants Of Punjab, Pakistan, Kafeel Ahmad, Zafar Iqbal Khan, Saman Nazar, Ifra Saleem Malik, Asma Ashfaq, Mudasra Munir, Humayun Bashir, Fatima Ghulam Muhammad, Shahzad Akhtar, Muhammad Nadeem, Shahid Mehmoud, Muhammad Umer Farooq Awan, Mumtaz Akhtar, Shahzadi Mahpara

Journal of Bioresource Management

The increased use of waste water for agriculture purposes has increased around the globe. There are toxic metals present in waste water which affect plants, animals and human health. But at the same time it also contains useful nutrients which increase growth of plants. Different indices were applied to evaluate the metals present in water soil plant and milk. Various and correlation were determined with the help of SPSS, mean significance was found at the probability levels of 0.05, 0.001 and 0.01. The highest value of Cr was found in Avena sativa (0.7872 mg/kg) collected from site 5 while lower …

Checklist Of Zooplankton Of The Halda River, Chattogram, Bangladesh, Md. Safiqul Islam, M.A. Azadi, Munira Nasiruddin, Md. Tajul Islam

Journal of Bioresource Management

The River Halda is one of the important natural breeding grounds of Indian major carp (Labeo rohita, Labeo calbasu, Gibelion catla, Cirrhinus mrigala) in Bangladesh for its unique physicochemical and biological properties of water. The productivity of the Halda ecosystem mainly depends on the plankton diversity. Zooplankton directly affects the productivity of the Halda River ecosystem. Research work was conducted for the two years extending from January 2017 to December 2018 to identify the zooplankton community of the Halda River. A total of 71 species of zooplankton under 37 genera belonging to 9 groups were identified. The dominant …