Digital Commons Network^™

Distinguishing Between Yield Advances And Yield Plateaus In Historical Crop Production Trends, Patricio Grassini, Kent M. Eskridge, Kenneth Cassman

Department of Agronomy and Horticulture: Faculty Publications

Food security and land required for food production largely depend on rate of yield gain of major cereal crops. Previous projections of food security are often more optimistic than what historical yield trends would support. Many econometric projections of future food production assume compound rates of yield gain, which are not consistent with historical yield trends. Here we provide a framework to characterize past yield trends and show that linear trajectories adequately describe past yield trends, which means the relative rate of gain decreases over time. Furthermore, there is evidence of yield plateaus or abrupt decreases in rate of yield …

Nitrous Oxide Emissions From Smooth Bromegrass Pasture Under Nitrogen Fertilizer And Ruminant Urine Application In Eastern Nebraska, Laura K. Snell

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Nitrous oxide (N₂O) is a greenhouse gas primarily produced in soils by denitrifying and nitrifying organisms. Agricultural soils account for 70% of emissions in the United States, but little data is available for contributions from managed pasture ecosystems. This study focused on the production of N₂O in smooth bromegrass (Bromus inermis Leyss.) pastures established on silt loam soils in eastern Nebraska. Thirty smooth bromegrass plots (1.5m x 1.5m) were treated with five different fertilizer treatments (0, 45, 90, 135, and 180 kg N/ha) and two urine treatments (urine and no urine). Herbage sampling was taken …

Ecology And Invasive Properties Of Musk Thistle (Carduus Nutans) In The Central Prairies Of Nebraska, Chengchou Han

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Musk thistle (Carduus nutans) is an herbaceous monocarpic herb introduced to the U. S. from Eurasia. The invasion of musk thistle can reduce forage area, soil stability, and reduce recreation and open areas for humans and wildlife.

Resistance of warm season and cool season perennial grass communities to musk thistle invasion is important for land managers to consider, especially where disturbance has made an area particularly susceptible. Our results show that disturbances, such as overgrazing can open up niches in canopies of warm season grass communities and facilitate invasion but not in cool season grass communities. The mechanism …

Long-Term Effects Of Rice Rotation, Tillage, And Fertility On Near-Surface Soil Carbon And Nitrogen Cycling, Jill Marie Motschenbacher

Graduate Theses and Dissertations

Rice (Oryza sativa L.)-based cropping systems are different from other row crops due to the flood-irrigation scheme used from about one month after planting to a few weeks prior to harvest. The frequent cycling between anaerobic (i.e., flooding during the growing season) and aerobic (i.e., generally, the remainder of the year) conditions can influence the rate of soil organic matter (SOM) decomposition, which can greatly influence carbon (C) and nitrogen (N) storage and sequestration in the soil over time. Therefore, a study was conducted on a silt-loam soil (fine, smectitic, thermic, Typic Albaqualf) at the Rice Research and Extension Center …

Breeding For Modified Seed Composition In Soybean: Selection Of Genotypes, Yield Stability, And Environmental Effects, Luciano Miguel Jaureguy

Graduate Theses and Dissertations

The development of cultivars with modified seed composition represents an excellent alternative to cope with the world's need for more nutritious food. Understanding the genetic and environmental factors controlling crop seed quality traits is of crucial importance for such an endeavor. The objectives of this study were: a) to evaluate the efficiency of phenotype and marker-assisted selection for low stachyose and low phytate soybean breeding lines, and their yield stability, b) to study the effect of management practices planting date and delayed harvest on soybean seed composition, and c) to study the potential association between soil properties and leaf chemical …

Evaluation Of The Recombination Efficiencies Of Flp Proteins, Linh Duy Nguyen

Graduate Theses and Dissertations

Site-specific recombination systems are powerful tools for genetic modification. They have been used to integrate a transgene into a pre-defined locus and to remove marker genes from a transgene locus. Two of the most widely used site-specific recombination systems in plants are the Cre/lox system from the bacteriophage P1 and the FLP/FRT system from the yeast Saccharomyces cerevisiae. The Cre/lox system is well-characterized and is the first choice in application of site-specific recombination system. However, some applications such as marker-free site-specific gene integration require the use of two recombination systems. In addition, the availability of alternative recombination systems can offer …

False Smut Of Rice: Histological Analysis Of Infection, Liem Thi Thanh Nguyen

Graduate Theses and Dissertations

False smut of rice, caused by Ustilaginoidea virens (Cooke) Takahashi (Teleomorph: Villosiclava virens), has become a common disease in most major rice growing regions throughout the world. Considerable confusion exists regarding the infection process and the disease cycle. Therefore, a clearer understanding of pathogenesis caused by Ustilaginoidea virens is critical for future efforts to develop genetic and chemical tools to manage false smut in Arkansas and other regions of the world. The overall goal of this research was to clarify the infection process underlying false smut, with emphasis on comparing and contrasting the histological basis of root and foliar infections. …

Documentation And Control Of Acetolactate Synthase-Resistant Barnyardgrass (Echinochloa Crus-Galli) In Arkansas Rice, Michael Joshua Wilson

Graduate Theses and Dissertations

Barnyardgrass, the most problematic grass weed of Arkansas rice, was found resistant to propanil in 1990, and since then, it has evolved resistance to quinclorac and clomazone. Barnyardgrass is now believed to have evolved resistance to acetolactate synthase (ALS)-inhibiting herbicides. The goal of this research was to confirm and determine the level of resistance of the putative resistant biotype to the ALS-inhibiting herbicides imazethapyr, bispyribac, and penoxsulam and to develop herbicide programs for controlling ALS-, propanil-, quinclorac-, and clomazone-resistant barnyardgrass. The lethal dose needed to kill 50% of the putative ALS-resistant plants was higher than that of the susceptible biotype …

Meta-Analysis Of Wheat Qtl Regions Associated With Heat And Drought Stress, Marlovi Andrea Acuna Galindo

Graduate Theses and Dissertations

Heat and drought are the two most important environmental constraints to wheat production globally, are often present simultaneously and will become more severe with global climate change. This presents a unique challenge to wheat scientists who must work to develop wheat cultivars that are productive and adapted to future environmental conditions. A number of recent studies have reported quantitative trait loci (QTL) associated with heat and drought tolerance, as well as QTL for stress adaptive traits such as the availability of stem carbohydrates or crop canopy temperature. The objective of this study was to perform a meta-analysis of these QTL …

Situation Statement: The 'Prickle Bush' Weeds (Mesquite, Parkinsonia And Prickly Acacia) In Western Australia, Jon Dodd, Andrew Reeves, Richard Watkins, Linda Anderson

Biosecurity published reports

The term 'Prickle bush weeds' refers to weedy trees and shrubs of Mesquite, Parkinsonia and Prickly acacia. All are present in Western Australia.

Mesquite and Parkinsonia are widespread, well established woody weeds in various parts of the WA Rangelands. Prickly acacia is a recent introduction and has a relatively restricted distribution in the East Kimberley. All three impact mainly on the pastoral industry and have considerable potential for further spread and greater impact within the Rangelands. All are Weeds of National Significance (WoNS) and are high priority Declared Plants in WA.

The purpose of this situation statement is to describe …

Marketing Contracts, Overconfidence, And Timing In The Canadian Wheat Market, Fabio L. Mattos, Stefanie A. Fryza

Department of Agronomy and Horticulture: Faculty Publications

This paper investigates factors that impact marketing performance in the Canadian wheat market. Using data provided by the Canadian Wheat Board (CWB) for six crop years, results indicate that producers were not able to profitably use all marketing contracts offered by the CWB, earlier pricing tended to generate better performance, there was a negative relationship between activeness and performance (suggesting overconfidence in marketing skills), and performance was generally worse in volatile crop years. Further analysis reveals some of these findings differ when outperforming and underperforming producers are investigated separately, particularly with respect to activeness and volatility.

Summaries Of Arkansas Cotton Research 2011, Derrick M. Oosterhuis

Arkansas Agricultural Experiment Station Research Series

No abstract provided.

Amelioration Of Root Disease Of Subterranean Clover (Trifolium Subterraneum) By Mineral Nutrients, Tim Scanlon, Tiernan A. O’Rourke, Megan H. Ryan, Martin J. Barbetti, Krishnapillai Sivasithamparam

Journal articles

Subterranean clover (Trifolium subterraneum) is a key pasture legume across southern Australia and elsewhere. Decline in subterranean clover pastures was first recognised in Australia during the 1960s and manifests as an increase in weeds and a decrease in desirable legume species. While both root disease and poor nutrition contribute to subterranean clover pasture decline, the relationships between root disease and nutrition have not been determined. The objective of this study was to define these relationships. Field experiments were undertaken to determine the nutritional and pathogen status of soils and subterranean clover from three Western Australian field sites. Subsequently, …

Efficacy And Costs Of Controlling Eastern Redcedar, John Ortmann, James L. Stubbendieck, Robert A. Masters, George H. Pfeiffer, Thomas B. Bragg

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

(Juniperus virginiana L.) is reducing grassland productivity across much of the Great Plains. Control methods include broadcast prescribed fire, herbicides, cutting, and individual tree ignition. All methods have disadvantages when used alone. Fire can be ineffective against larger trees. Intensive methods can be too expensive for low-productivity grasslands. The objectives of this research were to determine the effects of broadcast prescribed fie alone as measured at 3 weeks after fire; to compare the effects of picloram herbicide application with or without fire, sawing with or without fire, and individual tree ignition with fire; and to compare all treatment costs. …

Productivity Of Well-Watered Panicum Virgatum Does Not Increase With Co2 Enrichment, Philip A. Fay, H. Wayne Polley, Virginia L. Jin, Michael J. Aspinwall

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Aims Rising atmospheric CO₂ has been shown to increase aboveground net primary productivity (ANPP) in water-limited perennial grasslands, in part by reducing stomatal conductance and transpiration, thereby reducing depletion of soil moisture. However, the benefits of CO₂ enrichment for ANPP will vary with soil type and may be reduced if water limitation is low. Little is known about CO₂ effects on ANPP of Panicum virgatum, a perennial C₄ tallgrass and potential bioenergy crop. We hypothesized that if water limitation is minimized, (i) CO₂ enrichmentwould not increase P. virgatum ANPP because photosynthetic rates of this C …

Effects Of Environment And Genotype On Charcoal Rot Development On Soybeans, Micah Diane Doubledee

Graduate Theses and Dissertations

Charcoal rot of soybean, caused by the soilborne fungus Macrophomina phaseolina (Tassi) Goid, is a disease associated with high soil temperature and low soil moisture. Above-ground symptoms, which can be difficult to distinguish from drought symptoms, include low vigor, dead leaves that remain attached to the plant, early senescence and yield loss. Irrigation limits damage, but does not prevent colonization of the tissue by the pathogen. No soybean line is immune to M. phaseolina, but a few lines may have moderate resistance. The objectives of this research were to 1) determine the effects of genotype and drought on the development …

High-Throughput Transcriptome Sequencing For Snp And Gene Discovery In A Moth, Nicholas J. Miller, Jing Sun, Thomas W. Sappington

Department of Entomology: Faculty Publications

The western bean cutworm, Striacosta albicosta (Smith) (Leptidoptera: Noctuidae) is a pest of corn (Zea mays L.) and dry beans that underwent a dramatic range expansion in North America during the first decade of the 21st century. Research into the population genetics of this species has been hindered by a lack of genetic markers. The transcriptome of adult male S. albicosta was partially sequenced using Illumina sequencing-by-synthesis. Assembly of the sequence reads yielded 16,847 transcript sequences, of which 6,631 could be assigned a putative function. A search for single nucleotide polymorphisms (SNPs) identified 2,487 candidate SNPs distributed among 1,265 …

B.R. Wells Rice Research Studies 2011, R. J. Norman, K.A. K. Moldenhauer

Arkansas Agricultural Experiment Station Research Series

No abstract provided.

Genetic Structure And Mating System Of Wild Cowpea Populations In West Africa, Eric B. Kouam, Remy S. Pasquet, Pascal Campagne, Jean Baptiste Tignegre, Kevin Thoen, Remi Gaudin, Jeremy T. Ouedraogo, Abdulai B. Salifu, Geoffrey M. Muluvi, Paul Gepts

All Peer-Reviewed Publications

Background: Cowpea is a highly inbred crop. It is part of a crop-weed complex, whose origin and dynamics is unknown, which is distributed across the African continent. This study examined outcrossing rates and genetic structures in 35 wild cowpea (Vigna unguiculata ssp. unguiculata var. spontanea) populations from West Africa, using 21 isozyme loci, 9 of them showing polymorphism.Results: Outcrossing rates ranged from 1% to 9.5% (mean 3.4%), which classifies the wild cowpea breeding system as primarily selfing, though rare outcrossing events were detected in each population studied. Furthermore, the analyses of both the genetic structure of populations and the relationships …

Chlorophyll-Based Approach For Remote Estimation Of Crop Gross Primary Production: From In Situ Measurements To Satellite Imagery, Yi Peng

School of Natural Resources: Dissertations, Theses, and Student Research

The synoptic and accurate quantification of crop gross primary production (GPP) is essential for studying carbon budgets in croplands and monitoring crop status. The objective of this dissertation is to develop a quantitative technique to estimate crop GPP using remotely sensed data collected from close range to satellite altitudes. In this study, a model based on a recently developed paradigm, which relates crop GPP to a product of total crop chlorophyll content and incident radiation affecting vegetation photosynthesis, was justified for the remote estimation of GPP in crops. The model was tested with ground-observed incoming photosynthetically active radiation (PAR_{in …}

Composting Manure And Other Organic Materials, Charles S. Wortmann, Charles A. Shapiro

Department of Agronomy and Horticulture: Faculty Publications

The Composting Process

Composting is the aerobic decomposition of manure or other organic materials in the thermophilic temperature range (104-149oF). Composted material is odorless, fine-textured, and low-moisture. It can be bagged and sold for use in gardens or nurseries, or used as fertilizer on cropland with little odor or fly breeding potential. Composting improves the handling characteristics of any organic residue by reducing its volume and weight. Composting can kill pathogens and weed seeds.

Disadvantages of composting organic residues include loss of nitrogen and other nutrients, time for processing, cost for handling equipment, available land for composting, odors, marketing, diversion …

Escape From Preferential Retention Following Repeated Whole Genome Duplications In Plants, James C. Schnable, Xiaowu Wang, J. Chris Pires, Michael Freeling

Department of Agronomy and Horticulture: Faculty Publications

The well supported gene dosage hypothesis predicts that genes encoding proteins engaged in dose–sensitive interactions cannot be reduced back to single copies once all interacting partners are simultaneously duplicated in a whole genome duplication. The genomes of extant flowering plants are the result of many sequential rounds of whole genome duplication, yet the fraction of genomes devoted to encoding complex molecular machines does not increase as fast as expected through multiple rounds of whole genome duplications. Using parallel interspecies genomic comparisons in the grasses and crucifers, we demonstrate that genes retained as duplicates following a whole genome duplication have only …

Identification And Confirmation Of Ssr Markers And Qtl For Seed Calcium Content And Hardness Of Soybean, Moldir Orazaly

Graduate Theses and Dissertations

The health benefits and the nutritional values of soyfood products have expanded the demand for food-grade soybean varieties. For whole soyfood products such as natto, small seeded varieties with proper texture are essential. Seed calcium content and hardness are main factors in determining the seed texture. Utilizing molecular markers associated with quantitative trait loci (QTL) for marker assisted selection (MAS) has been an efficient technique for breeders. To find molecular markers associated with a trait is an initial step. The confirmation of QTL in different environments and in different genetic backgrounds is important for MAS. The objectives of this research …

Cotton Response To High Temperature Stress During Reproductive Development, Justin B. Phillips

Graduate Theses and Dissertations

Temperature is a primary controller of the rate of plant growth, developmental events, and fruit maturation. Increased temperatures from global climate change are projected to cause substantial losses in crop productivity by the end of the twenty-first century. Elevated temperatures affect all stages of cotton development, but the crop seems to be particularly sensitive to adverse temperatures during reproductive development. In Arkansas, temperature stress is considered to be one of the main factors affecting cotton yield. Environmental stress during floral development is a major reason for the disparity between actual and potential yields. Field and growth chamber studies were conducted …

Herbicide Resistance Mechanism(S) In Italian Ryegrass (Lolium Perenne Ssp. Multiflorum) Populations In The Southern United States, Reiofeli Algodon Salas

Graduate Theses and Dissertations

Italian ryegrass is a principal weed problem in wheat production fields in the Southern US. Resistance to herbicides diclofop, mesosulfuron, and pinoxaden among ryegrass populations has been reported. Glyphosate-resistant Italian ryegrass populations were identified in Desha County, Arkansas. This research aimed to 1) determine resistance patterns to ACCase (diclofop and pinoxaden) and ALS (imazamox, mesosulfuron, and pyroxsulam) herbicides among Italian ryegrass populations from the southern US; 2) determine if cytochrome P450-mediated enhanced herbicide metabolism contributed to resistance; and 3) elucidate the resistance mechanism to glyphosate in four Arkansas populations (Des03, Des05, Des14, and D8). For objective 1, 30 accessions from …

Multifunctionality In U.S. Rice Production: A Logit Analysis In Farmers Participation, Juan Tur Cardona

Graduate Theses and Dissertations

Multifunctional agriculture is particularly fundamental to some working lands conservation policies and programs, such as the Environmental Quality Incentive Program (EQIP), Conservation Security Program (CSP) and Wildlife Habitat Incentive Program (WHIP). Farmers can also be engaged in providing recreational and agri-tourism services such as hunting, fishing, bird-watching, farm tours, petting zoos and hospitality services. Using the Agricultural Resource Management Survey (ARMS) we analyze factors associated with participation in conservation, recreation and agri-tourism activities as a function of farm structure, farm financial measures, production practices, and socio-demographic characteristics of the farm operator. To estimate the functional relationships we estimate a binary …

Strawberry Growth, Yield, Fruit Nutrition, And Control Of Verticillium Wilt With Pre-Plant Soil Fumigants, Ozone, And Biological Control, Justin J. Scurich

Master's Theses

Verticillium wilt is a widespread soilborne disease of strawberry historically controlled by soil fumigation with methyl bromide (MB). MB was banned by the United Nations in 1995 and will be completely phased out by 2015. Research has concentrated on alternative methods of disease control without finding a single alternative able to replace MB in widespread disease control and yield increase. For the current study, strawberries were greenhouse grown in container pots filled with soil from both infested and non-infested areas of a commercial strawberry field in Watsonville, CA. Treatments included pre-plant soil fumigation with commercially available formulations of methyl bromide, …

Proceedings Of The 39th Annual Meeting, Southern Soybean Disease Workers (March 7-8, 2012, Pensacola Beach, Florida), Tom Allen, Boyd Padgett, Danise Beadle, Stephen R. Koenning

Southern Soybean Disease Workers: Conference Proceedings

Contents

Symposium: Soybean Nematodes: Their Status, Impact and Management

The Current Status of Nematodes of Soybean in Louisiana and Arkansas. Charles Overstreet, Edward C McGawley, Melea Martin, and Terry Kirkpatrick

A Molecular Analysis of Resistance of Soybean to the Soybean Cyst Nematode. Vincent Klink

Racism in Nematology. Terry Niblack

SCN-resistant Soybeans, HG types, Yield, and SCN Reproduction: How It All Comes Together in the Field in Iowa. Gregory Tylka

Soybean Lines Evaluated for Resistance to Reniform Nematode. Sally Stetina

Graduate student presentations (Boyd Padgett, moderator)

Fungicide Resistance in Cercospora kikuchii, a Major Pathogen of Louisiana Soybean. Trey Price

Variation …

2011 Vadose Zone Nitrate Study At Hastings, Ne (Revised), Roy F. Spalding, Martin Toavs

Department of Agronomy and Horticulture: Faculty Publications

In an effort to assist Hastings Utilities in the management of their well-head protection area (WHP A) and to protect the groundwater from the impact of nitrate loading from potential nonpoint and point sources, Hastings Utilities subcontracted with the Department of Agronomy and Horticulture at the University of Nebraska for deep vadose zone coring. Continuous 60-ft soil cores were obtained at 36 sites within the apparent WHP A (Figure 1). The sites were selected by Marty Stange on the basis of availability for sampling, management, landuse , cropping history, and location within the WHPA. Nitrogen analyses of these deep soil …

Genome-Wide Analysis Of Syntenic Gene Deletion In The Grasses, James C. Schnable, Michael Freeling, Eric Lyons

Department of Agronomy and Horticulture: Faculty Publications

The grasses, Poaceae, are one of the largest and most successful angiosperm families. Like many radiations of flowering plants, the divergence of the major grass lineages was preceded by a whole-genome duplication (WGD), although these events are not rare for flowering plants. By combining identification of syntenic gene blocks with measures of gene pair divergence and different frequencies of ancient gene loss, we have separated the two subgenomes present in modern grasses. Reciprocal loss of duplicated genes or genomic regions has been hypothesized to reproductively isolate populations and, thus, speciation. However, in contrast to previous studies in yeast and teleost …