Digital Commons Network^™

Negative Impacts Of The Beef Industry: Lab-Grown Meat, Stephanie Grass

WRIT: Journal of First-Year Writing

The beef industry is harmful to the environment and human health and alternative solutions must be implemented in order to mitigate the effects of climate change. Water and grain are used in agriculture in abundance despite the negative environmental effects it causes. Cattle are the biggest contributors to greenhouse gas emissions in the sector, also contributing to climate change. Antibiotics are used in large quantities without regard to potential future consequences. One potential solution for this problem is lab-grown beef, which demands very little from the consumer and would take pressure off the environmental issues the beef industry creates. Lab-grown …

A Bayesian Analysis Of Longitudinal Farm Surveys In Central Malawi Reveals Yield Determinants And Site-Specific Management Strategies, Han Wang, Sieglinde S. Snapp, Monica Fisher, Frederi Viens

All Peer-Reviewed Publications

Understanding the challenges to increasing maize productivity in sub-Saharan Africa, especially agronomic factors that reduce on-farm crop yield, has important implications for policies to reduce national and global food insecurity. Previous research on the maize yield gap has tended to emphasize the size of the gap (theoretical vs. achievable yields), rather than what determines maize yield in specific contexts. As a result, there is insufficient evidence on the key agronomic and environmental factors that influence maize yield in a smallholder farm environment. In this study, we implemented a Bayesian analysis with plot-level longitudinal household survey data covering 1,197 plots and …

Impacts Of Size Fractionation And Processing On Functional Characteristics Of Broken Rice Kernels, Rebecca Mawusi Bruce

Graduate Theses and Dissertations

Rice flour generated from broken rice (brokens) has inconsistencies in functional properties. This may be due to differences in size and composition of brokens used for the flour. It is postulated that size classification of brokens can improve flour functionality. This study sought to investigate the effect of size fractionation of brokens on the functional or pasting properties of resulting rice flour. Broken rice was generated from six cultivars of freshly harvested rough rice that were dried at 25◦C in the laboratory. The brokens were classified into large, medium and small, using US sieve size 10, 12 and 20 respectively. …

Dual Biological Control: Characterization Of Fungi And Bacteria To Control Granary Weevil And Fungal Pathogens Of Stored Grain, Gülçin Ercan

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Cereals are main food sources for humans and animals. However, during storage, cereal grains can be infested by insects and fungi. One of the most important insect storage pests is Sitophilus granarius (L., Coleoptera: Curculionidae). Adults and larvae can cause serious grain losses. In addition to insect pests, fungal pathogens may also invade the grain and cause economic loss, including contamination with mycotoxins, which threaten mammal health by causing serious disease. The most common mycotoxigenic grain fungi are species that belong to the genera Fusarium, Aspergillus and Penicillium. Currently, the most commonly used management strategies for insect and …

Rescue And Reestablishment Of Chicken Models For Spontaneously Occurring Hashimoto’S Thyroiditis And Systemic Sclerosis/Scleroderma, Joseph Zolton Hiltz

Graduate Theses and Dissertations

The loss of biodiversity is a topic gaining popularity both in the political and scientific forums. Nearly 30 years ago researchers and politicians congregated in Rio de Janeiro (1992) to attend the first Earth Summit. It was the first meeting of its kind discussing the tangible pressing consequences of biodiversity loss as well as the potential long term ramifications. Many of the countries represented at this summit implemented short and long term plans in order to accurately measure losses of biodiversity as well as establishing organizations to help diagnose and remedy the current problems at hand. These new organizations and …

Technologies To Increase Animal Performance In Beef Production Systems, Caleb P. Weiss

Graduate Theses and Dissertations

Three monensin levels during a stocker phase (0, 800, 1600 g/ton in a free choice mineral) and two levels during finishing (0 [U] or 37.5 mg/kg diet DM [M]) were used to determine the effects of monensin supplementation during a stocker and subsequent finishing phase on beef calves. Steers (n = 605, BW = 278 ± 27 kg) were fed pearl millet hay with soybean hull and corn gluten feed supplement (0.5% BW daily [AF basis] Block 1) or grazed fall wheat (Block 2), spring wheat (Block 3), bermudagrass (Blocks 4 & 5) or wheat with mixed-grass baleage (Block 6). …

Beyond Averages: New Approaches To Understand Heterogeneity And Risk Of Technology Success Or Failure In Smallholder Farming, Bernard Vanlauwe, R. I.C. Coe, Ken E. Giller

All Peer-Reviewed Publications

In recent years, many studies have demonstrated the heterogeneity of the smallholder production environment. Yet agronomic research for development (R4D) that aims to identify and test options for increasing productivity has not consistently adapted its approaches to such heterogeneous conditions. This paper describes the challenges facing research, highlighting the importance of variation in evaluating the performance of soil management recommendations, integrating aspects of production risk management within the formulation of recommendations, and proposing alternative approaches to implement agronomic R4D. Approaches are illustrated using two multi-locational on-farm paired trials, each having one no-input control treatment and a treatment with fertilizer application …

The Effects Of Agricultural Waste-Based Compost Amendments In Organic Pest Management, Gregg T. Stephenson

Master's Theses

Soil-borne pests and pathogens, such as Verticillium dahliae, can devastate a wide range of annual and perennial crops. Current management options for organic production are limited and sustainable management of pathogens, weeds, and arthropods is important for staying profitable and reducing the use of harmful chemicals. Organic soil amendments play an important role in supplying some of the nutritional needs of vegetable crops and improving soil structure, while also contributing to pest control. The objective of this research was to determine the effects of grape and olive-based composts on soil pathogen load, arthropod communities, and weed biomass and diversity. …

Use Of Annual Forage Mixtures In Crop/Livestock Production Systems In Nebraska, Nathan Paul Pflueger

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Success of integrating annual forages into crop and livestock systems throughout Nebraska may be variable depending on field location, field/forage crop management, and precipitation. There are many different warm- and cool-season annual forage species available for integrating crop and livestock systems at different times of the year. Mixtures of cereal species, such as oats (Avena sativa)) and spring peas (Pisum sativum)), are often used to optimize forage quantity and forage quality. Our two-year, three location study across Nebraska’s precipitation gradient suggested that forage quantity and quality may vary by location due to different precipitation amounts received …

Modelling Appropriate Use Of Trypanocides To Restrict Wide-Spread Multi-Drug Resistance During Chemotherapy Of Animal African Trypanosomiasis, Ibrahim I. Wangwe, Sarah A. Wamwenje, Caroline Mirieri, Nicodemus M. Masila, Lillian Wambua, Benard W. Kulohoma

All Peer-Reviewed Publications

Trypanocide resistance remains a huge challenge in the management of animal African trypanosomiasis. Paucity of data on the prevalence of multi-drug resistant trypanosomes has greatly hindered optimal veterinary management practices. We use mathematical model predictions to highlight appropriate drug regimens that impede trypanocide resistance development in cattle. We demonstrate that using drugs in decreasing resistance order results in a negligible increase in number of cattle with resistant infection, in contrast to a more pronounced increase from trypanocide use in increasing resistance order. We demonstrate that the lowest levels of trypanocide resistance are achieved with combination therapy. We also show that …

Science Communication In Agriculture: The Role Of The Trusted Adviser, Lee Galen Briese

Doctor of Plant Health Program: Dissertations and Student Research

Agronomy is not simply the selling of agricultural products to farmers, nor is it the process of solving singular production problems. Agronomy is defined as the integrated, holistic perspective of agriculture (ASA, 2019) and “agronomists are specialists in crop and soil sciences, as well as ecology” (ASA, 2019). While scientific investigation and discovery are essential to understanding systems function, the tangible benefits from our knowledge stems from the application to solve problems. Clear communication is vital to successfully help stakeholders understand the importance of the science and help scientists understand the challenges stakeholders face. However, to successfully put science into …

Establishment Of Perennial Legumes With An Annual Warm-Season Grass As A Companion Crop, Martina N. La Vallie

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The yields of perennial forage legumes are often hindered during the establishment year due to slow germination rates and weed competition. This study was conducted to determine if sorghum-sudangrass (Sorghum bicolor x S. bicolor var. sudanese) is a compatible annual companion crop for increased forage production, weed suppression, and legume establishment. In 2016, sorghum-sudangrass was paired with alfalfa (Medicago sativa L. ‘Ranger’), birdsfoot trefoil (Lotus corniculatus L.), Illinois bundleflower [Desmanthus illinoensis (Michx.) MacMill. ex B.L. Rob. & Fernald], purple prairie clover (Dalea purpurea Vent.), red clover (Trifolium pratense L.), and roundhead lespedeza (Lespedeza capitata Michx.). We studied effects of a …

Characterization Of Macrophomina Phaseolina Infecting Chia Plants, Cailyn Sakurai, Hagop S. Atamian, Julien Besnard

Student Scholar Symposium Abstracts and Posters

Microbial organisms have caused detrimental effects to agricultural plants by significantly decreasing their plant growth yield and it’s nutritional qualities, leading to high levels of economic losses in society. Salvia Hispanica L., commonly known as chia, is becoming a rising agricultural crop because of its favorable nutritional qualities. Chia seeds have a high concentration of α-linolenic acid, commonly known as omega-3 fatty acids) which provide several different health benefits, in addition to being a rich source of protein and fiber. Chia field trial conducted by the Atamian lab during summer 2018, experienced high levels of disease incidence characterized by …

Partisi Bahan Kering Bibit Kopi Arabika (Coffea Arabica L.) Yang Diberi Asam Humat Dan Pupuk Npk Tablet, Santi Rosniawaty, Rija Sudirja, Mira Ariyanti, Syariful Mubarok, Rachmad Akbar

Jurnal Kultivasi

Kopi merupakan salah satu produk perkebunan penghasil devisa negara. Saat ini tanaman kopi menjadi andalan beberapa daerah di Indonesia dengan kekhasannya. Namun demikian produksi kopi masih perlu ditingkatkan karena masih tidak sesuai dengan potensi produksi. Peningkatan produksi kopi dapat diawali dari pembibitan. Pengelolaan bibit yang baik dapat dilakukan dengan pemberian pupuk NPK tablet dan asam humat, yang nantinya akan mempengaruhi fotosintesis dan fotosintat yang dihasilkan. Tujuan penelitian adalah untuk melihat partisi bahan kering bibit kopi melalui bobot kering bagian-bagian tanaman pada bibit kopi yang diberi NPK tablet dan asam humat. Percobaan dilakukan di bulan Februari 2017 sampai bulan April 2017 …

Regenerative Grazing And The Benefits Of Livestock On Soils In Northern New South Wales, Raymond Mooney

Independent Study Project (ISP) Collection

Conventional cattle grazing has received criticism for environmental degradation in the past. Regenerative grazing and the principles of regenerative agriculture show encouraging signs that proper livestock management and planned grazing can reverse degradation and mitigate climate change. An emphasis on soil health and increasing soil carbon and organic matter levels reveals positive feedback for environmental health, the economic security of farmers, and nutritional health of consumers.

In this study I looked to investigate the benefits of regenerative agriculture, reasons why it is being practiced, and the extent it is practiced within the grazing in comparison to traditional methods within Northern …

Learning From The Soil's Memory: Tailoring Of Fertilizer Application Based On Past Manure Applications Increases Fertilizer Use Efficiency And Crop Productivity On Kenyan Smallholder Farms, Samuel Njoroge, Antonius G.T. Schut, Ken E. Giller, Shamie Zingore

All Peer-Reviewed Publications

The large uncertainty in yield response to fertilizer application within smallholder cropping systems in sub-Saharan Africa (SSA) limits efforts aimed at intensifying crop production based on increased fertilizer application. We assessed the key field-scale cause of variability in maize (Zea mays) grain yield response to fertilizer nitrogen (N), phosphorus (P) and potassium (K) in the Sidindi area of Western Kenya based on past manure application, distance from the homestead, and clay and silt contents. We used data from nutrient omission trials conducted on 23 farms over seven consecutive cropping seasons covering the period 2013–2016, without changing treatments or plot location. …

Defining, Measuring, And Applying Soil Quality: An Unresolved Debate, Salvador Ramirez Ii

Doctor of Plant Health Program: Dissertations and Student Research

Paradigm shifts occur periodically in the sciences. Proposed paradigm shifts offer opportunities to reexamine extant paradigms and evaluate new ones. Soil science experienced a controversy resembling a proposed paradigm shift in the late 1990s and early 2000s when it grappled with the idea of soil quality (SQ). The most contentious points in the SQ debates were (1) the word “quality” itself and designing a functional definition, (2) identifying appropriate soil quality indicators, (3) the integration of soil quality indicators, and (4) the interpretation of soil quality indicators. The latter three disagreements were rooted in the established, fundamental, soil science paradigm. …

Proceedings Of The 46th Annual Meeting Of The Southern Soybean Disease Workers (March 6-7, 2019, Pensacola Beach, Florida), Carl Bradley, Heather M. Kelly, Burt Bluhm, Danise Beadle, Patricia Bollich, Trey Price, Tom Allen

Southern Soybean Disease Workers: Conference Proceedings

Contents

List of SSDW Officers

Agenda for March 6-7, 2019

Abstracts for presented/contributed papers

Evaluating phytotoxicity in response to fungicide by adjuvant combinations. TW Allen and TH Wilkerson

Effect of delayed harvest on the seed quality of commercial soybean cultivars. JC Rupe, JA Rojas, R Holland, SR Segalin, RD Bond, and JA Still

Virome of Macrophomina phaseolina isolates collected from soybean fields in Mississippi. Nina Aboughanem-Sabanadzovic, Tessie Wilkerson, Tom Allen, and Sead Sabanadzovic

Genomic evidence for interspecific hybridization in Cercospora cf. flagellaris strains associated with Cercospora leaf blight of soybean. Alex Zaccaron, Kona Swift, Ahmad Fakhoury, and Burt Bluhm

Identification …

Evaluation Of Stabilized Fertilizer And Crop Canopy Sensors As Next-Generation Nitrogen Management Technologies In Irrigated Corn, Leonardo Mendes Bastos

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Nitrogen (N) is often the most limiting nutrient to corn. Once applied to the field, N can be lost through different pathways, which contributes to low N use efficiency (NUE) by plants. Increases in NUE and decreases in N losses can be potentially achieved by using management options that allow a better synchrony between N supply and demand, such as stabilized fertilizers, and spatially-variable sensor-derived in-season N application. Three studies were conducted in order to assess the effects of different stabilized fertilizers and crop canopy sensors on irrigated corn yield. The first study evaluated the effect of urease inhibitor on …

The Effects Of Zinc Nanofertilizers On Tomato Plants, Ketsira Pierre

Honors Undergraduate Theses

Farmers around the world aim to use soil with adequate nutrients to produce sufficient and quality crops to the world's ever-growing population. Unbalanced use of nutrients in the soil will lead to soil deficiency, which is usually seen in South and Southeast Asian countries. This soil deficiency is often due to loss of micronutrient(s) within the soil from farming practices. Micronutrient deficiency affects not only plant growth but human health. Plants grown in nutrient deficient soil produce food with nutrient deficiencies, which affect people dependent on these foods for nutrients (Kathmandu, 2004). Nutrient deficient diseases and disorders like malnutrition are …

Assessing Variation In Us Soybean Seed Composition (Protein And Oil), Yared Assefa, Larry C. Purcell, Montse Salmeron, Seth Naeve, Shaun N. Casteel, Peter Kovacs, Sotirios Archontoulis, Mark Licht, Fred Below, Herman Kandel, Laura E. Lindsey, John Gaska, Shawn Conley, Charles Shapiro, John M. Orlowski, Bobby R. Golden, Gurpreet Kaur, Maninderpal Singh, Kurt Thelen, Randall Laurenz, Dan Davidson, Igancio A. Ciampitti

Department of Agronomy and Horticulture: Faculty Publications

Soybean [Glycine max (L.) Merr.] seed composition and yield are a function of genetics (G), environment (E), and management (M) practices, but contribution of each factor to seed composition and yield are not well understood. The goal of this synthesis-analysis was to identify the main effects of G, E, and M factors on seed composition (protein and oil concentration) and yield. The entire dataset (13,574 data points) consisted of 21 studies conducted across the United States (US) between 2002 and 2017 with varying treatments and all reporting seed yield and composition. Environment (E), defined as site-year, was the dominant …

Drought Stress Tolerance In Wheat And Barley: Advances In Physiology, Breeding And Genetics Research, Ahmed Sallam, Ahmad M. Alqudah, Mona F. A. Dawood, P. Stephen Baenziger, Andreas Borner

Department of Agronomy and Horticulture: Faculty Publications

Climate change is a major threat to most of the agricultural crops grown in tropical and sub-tropical areas globally. Drought stress is one of the consequences of climate change that has a negative impact on crop growth and yield. In the past, many simulation models were proposed to predict climate change and drought occurrences, and it is extremely important to improve essential crops to meet the challenges of drought stress which limits crop productivity and production. Wheat and barley are among the most common and widely used crops due to their economic and social values. Many parts of the world …

Diversifying Cornfields By Interseeding Cover Crops: Practical Implications And The Response Of Invertebrate Communities, Michael Bredeson

Electronic Theses and Dissertations

The lack of suitable habitat conditions for beneficial organisms in simplified agroecosystems leads to unstable invertebrate communities and overreliance on chemical control of herbivores. It is possible to manage pest populations without agrichemicals by manipulating farmland so that herbivores are impaired by plant-driven bottom-up and enemy-driven top-down antagonisms. Interseeding cover crops between established crop rows is a method used by farmers to improve habitat suitability for natural enemies and hinder host-finding, feeding and movement by herbivores. Here I address three important research gaps related to interseeding cover crops. A calcium carbonate seed coating, used to improve seed-broadcasting efficiency, was tested …

Beyond Bird Feed: Proso Millet For Human Health And Environment, Saurav Das, Rituraj Khound, Meenakshi Santra, Dipak K. Santra

Department of Agronomy and Horticulture: Faculty Publications

Domesticated in 8000–10,000 BP in northern China, proso millet (Panicum miliaceum L.) is the best adaptive rotational crop for semiarid central High Plains of the USA, where average annual precipitation is 356–407 mm. Proso millet has multiple benefits when consumed as human food. Proso millet is rich in minerals, dietary fiber, polyphenols, vitamins and proteins. It is gluten-free and therefore, ideal for the gluten intolerant people. Proso millet contains high lecithin which supports the neural health system. It is rich in vitamins (niacin, B-complex vitamins, folic acid), minerals (P, Ca, Zn, Fe) and essential amino acids (methionine and cysteine). …

A Spatial Framework For Ex-Ante Impact Assessment Of Agricultural Technologies, José F. Andrade, Juan I. Rattalino Edreira, Andrew Farrow, Marloes P. Van Loon, Peter Q. Craufurd, Jairos Rurinda, Shamie Zingore, Jordan Chamberlin, Lieven Claessens, Julius Adewopo, Martin K. Van Ittersum, Kenneth G. Cassman, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Traditional agricultural research and extension relies on replicated field experiments, on-farm trials, and demonstration plots to evaluate and adapt agronomic technologies that aim to increase productivity, reduce risk, and protect the environment for a given biophysical and socio-economic context. To date, these efforts lack a generic and robust spatial framework for ex-ante assessment that: (i) provides strategic insight to guide decisions about the number and location of testing sites, (ii) define the target domain for scaling-out a given technology or technology package, and (iii) estimate potential impact from widespread adoption of the technology(ies) being evaluated. In this study, we developed …

The Genome Of Broomcorn Millet, Changsong Zou, Leiting Li, Daisuke Miki, Delin Li, Qiming Tang, Lihong Xiao, Santosh Rajput, Ping Deng, Li Peng, Wei Jia, Ru Huang, Meiling Zhang, Yidan Sun, Jiamin Hu, Xing Fu, Patrick S. Schnable, Yuxiao Chang, Feng Li, Hui Zhang, Baili Feng, Xinguang Zhu, Renyi Liu, James C. Schnable, Jian-Kang Zhu, Heng Zhang

Department of Agronomy and Horticulture: Faculty Publications

Broomcorn millet (Panicum miliaceum L.) is the most water-efficient cereal and one of the earliest domesticated plants. Here we report its high-quality, chromosome-scale genome assembly using a combination of short-read sequencing, single-molecule real-time sequencing, Hi-C, and a high-density genetic map. Phylogenetic analyses reveal two sets of homologous chromosomes that may have merged ~5.6 million years ago, both of which exhibit strong synteny with other grass species. Broomcorn millet contains 55,930 proteincoding genes and 339 microRNA genes. We find Paniceae-specific expansion in several subfamilies of the BTB (broad complex/tramtrack/bric-a-brac) subunit of ubiquitin E3 ligases, suggesting enhanced regulation of protein dynamics …

Applicability Of The Dual Isotopes Δ15n And Δ18o To Identify Nitrate In Groundwater Beneath Irrigated Cropland, R. F. Spalding, A. J. Hirsh, M. E. Exner, N. A. Little, K. L. Kloppenborg

Department of Agronomy and Horticulture: Faculty Publications

Identification of the nitrate sources that adversely impact groundwater quality is a necessary first step in the control of this major worldwide pollutant. The impact of nitrate leachate from urea-ammonium nitrate (UAN) (50% urea-N, 25% ammonium-N, 25% nitrate-N) fertilizer, whose use has increased dramatically in the last three decades largely because it can be applied through sprinkler irrigation systems to corn in all growth stages, is investigated. The dual isotopes δ¹⁵N_NO3 and δ¹⁸O_NO3 were measured in groundwater samples from 39 irrigation wells in two intensively sprinkler-irrigated, corn-growing areas of Nebraska with nitrate-contaminated (N …

Development Of Chlorophyll-Meter-Index-Based Dynamic Models For Evaluation Of High-Yield Japonica Rice Production In Yangtze River Reaches, Ke Zhang, Xiaojun Liu, Syed Tahir Ata-Ul-Karim, Songyang Li, Brian Krienke, Songyang Li, Qiang Cao, Yan Zhu, Weixing Cao, Yongchao Tian

Department of Agronomy and Horticulture: Faculty Publications

Accurate estimation of the nitrogen (N) spatial distribution of rice (Oryza sativa L.) is imperative when it is sought to maintain regional and global carbon balances. We systematically evaluated the normalized differences of the soil and plant analysis development (SPAD) index (the normalized difference SPAD indexes, NDSIs) between the upper (the first and second leaves from the top), and lower (the third and fourth leaves from the top) leaves of Japonica rice. Four multi-location, multi-N rate (0–390 kg ha^-1) field experiments were conducted using seven Japonica rice cultivars (9915, 27123, Wuxiangjing14, Wunyunjing19, Wunyunjing24, Liangyou9, and Yongyou8). Growth …

Engineering Linear, Branched-Chain Triterpene Metabolism In Monocots, Chase Kempinski, Zuodong Jiang, Garrett Zinck, Shirley J. Sato, Zhengxiang Ge, Thomas E. Clemente, Joseph Chappell

Department of Agronomy and Horticulture: Faculty Publications

Triterpenes are thirty-carbon compounds derived from the universal five-carbon prenyl precursors isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Normally, triterpenes are synthesized via the mevalonate (MVA) pathway operating in the cytoplasm of eukaryotes where DMAPP is condensed with two IPPs to yield farnesyl diphosphate (FPP), catalyzed by FPP synthase (FPS). Squalene synthase (SQS) condenses two molecules of FPP to generate the symmetrical product squalene, the first committed precursor to sterols and most other triterpenes. In the green algae Botryococcus braunii, two FPP molecules can also be condensed in an asymmetric manner yielding the more highly branched triterpene, botryococcene. Botryococcene …

Spatial Variability Of Soil Properties Under Different Land Use In The Dang District Of Nepal, Dinesh Panday, Roshan Babu Ojha, Devraj Chalise, Saurav Das, Bikesh Twanabasu

Department of Agronomy and Horticulture: Faculty Publications

Increased nutrient mining, soil erosion, and limited nutrient management has led to declines in soil quality and reduced productivity in many parts of Nepal. A study was conducted in the eastern part of the Dang district of Nepal in 2015 to assess the variability of selected soil properties of three different land use types (agricultural, agroforestry, and grassland) and to map their spatial distribution. A total of 120 soil samples were collected from 0–15 cm depth and analyzed for soil fertility parameters: pH, organic matter (OM), nitrogen (N), phosphorus (P), potassium (K), boron (B), and zinc (Zn). Results revealed that …