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Physical Sciences and Mathematics Commons

Open Access. Powered by Scholars. Published by Universities.®

2018

Portland State University

Student Research Symposium

Neural networks (Computer science)

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Full-Text Articles in Physical Sciences and Mathematics

Using Reservoir Computing To Build A Robust Interface With Dna Circuits In Determining Genetic Similarities Between Pathogens, Christopher Neighbor, Christof Teuscher May 2018

Using Reservoir Computing To Build A Robust Interface With Dna Circuits In Determining Genetic Similarities Between Pathogens, Christopher Neighbor, Christof Teuscher

Student Research Symposium

As computational power increases, the field of neural networks has advanced exponentially. In particular recurrent neural networks (RNNs) are being utilized to simulate dynamic systems and to learn to predict time series data. Reservoir computing is an architecture which has the potential to increase training speed while reducing computational costs. Reservoir computing consists of a RNN with a fixed connections “reservoir” while only the output layer is trained. The purpose of this research is to explore the effective use of reservoir computing networks with the eventual application towards use in a DNA based molecular computing reservoir for use in pathogen …